ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalb20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DOC10_HUMAN (Q96BY6) Dedicator of cytokinesis protein 10 (Protei... 32 1.4
2MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (C... 32 1.4

>DOC10_HUMAN (Q96BY6) Dedicator of cytokinesis protein 10 (Protein zizimin 3)|
          Length = 2183

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 380  VNSLSVLISHSSTGMQTLPQIKGTNRLSMP*RSGISDKTLTPTRTKVLLGHH 225
            ++S S    H     QTLP I+G N LS P    + D T+T    ++ + HH
Sbjct: 1421 MHSTSSHEGHKQHRSQTLPIIRGKNALSNPKLLQMLDNTMTSNSNEIDIVHH 1472



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>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)|
          Length = 162

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = -3

Query: 167 ETGCRLG-ACMQCRNETNASCFVFGKNRACMHARARQPCYTCMC 39
           + GC  G     C  + N+ C    K   C  A ++Q C TC C
Sbjct: 117 QQGCCCGDKAKACCTDPNSGCCCSNKANKCCDATSKQECQTCQC 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,213,817
Number of Sequences: 219361
Number of extensions: 2118014
Number of successful extensions: 4783
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4782
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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