ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 450 bits (227), Expect = e-124 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6518 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 6577 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6578 agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 6637 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6638 ccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcg 6697 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6698 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggaga 6757 Query: 241 agtt 244 |||| Sbjct: 6758 agtt 6761 Score = 283 bits (143), Expect = 1e-73 Identities = 218/244 (89%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| || ||||| || ||||| |||||||||| || |||| Sbjct: 3391 tgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgc 3450 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| |||||||||||||||||||||||| || || |||| Sbjct: 3451 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgccca 3510 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || |||||||||||||||||||||||||| ||||||||| ||| Sbjct: 3511 ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatcatcg 3570 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||||| Sbjct: 3571 tcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatggaga 3630 Query: 241 agtt 244 |||| Sbjct: 3631 agtt 3634
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 450 bits (227), Expect = e-124 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 835 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 836 agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 895 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 896 ccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcg 955 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 956 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggaga 1015 Query: 241 agtt 244 |||| Sbjct: 1016 agtt 1019
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 450 bits (227), Expect = e-124 Identities = 239/244 (97%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 580 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 581 agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 640 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 641 ccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcg 700 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 701 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggaga 760 Query: 241 agtt 244 |||| Sbjct: 761 agtt 764
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 379 bits (191), Expect = e-102 Identities = 230/244 (94%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 696 tgtgctgcctcttcatcaacgatcttgacgccggtgcgggtaggatgggcgggaccacac 755 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 756 agtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgatgccccca 815 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 |||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 816 ccaatgtgcagctcccaggcatgtacaacaaggaggagaacccacgtgtgcccatcgtcg 875 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| |||||||||||||||||| | ||||| |||||||||||||||||||| ||||||| Sbjct: 876 tcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgtatggaga 935 Query: 241 agtt 244 |||| Sbjct: 936 agtt 939
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 299 bits (151), Expect = 2e-78 Identities = 220/244 (90%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| || ||||| || |||||| |||||||||| ||||| | Sbjct: 707 tgtgctgcctcttcatcaacgacctcgacgccggcgcgggtcggatgggcgggaccaccc 766 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||| Sbjct: 767 agtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgccca 826 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 827 ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgtgtccccatcatcg 886 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||||||||| ||||| || || |||||||| ||||| ||||||| Sbjct: 887 tcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatggaga 946 Query: 241 agtt 244 |||| Sbjct: 947 agtt 950
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 283 bits (143), Expect = 1e-73 Identities = 218/244 (89%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| || ||||| || ||||| |||||||||| || |||| Sbjct: 822 tgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgc 881 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| |||||||||||||||||||||||| || || |||| Sbjct: 882 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgccca 941 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || |||||||||||||||||||||||||| ||||||||| ||| Sbjct: 942 ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatcatcg 1001 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||||| Sbjct: 1002 tcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatggaga 1061 Query: 241 agtt 244 |||| Sbjct: 1062 agtt 1065
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 268 bits (135), Expect = 7e-69 Identities = 216/244 (88%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| || || ||||| || |||||||||| ||||| | Sbjct: 358 tgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccaccc 417 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 418 agtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccca 477 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||| ||| |||| ||||||||||||||| ||||||||||||| ||||||||| ||| Sbjct: 478 ccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcg 537 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 538 tcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggaga 597 Query: 241 agtt 244 |||| Sbjct: 598 agtt 601
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 268 bits (135), Expect = 7e-69 Identities = 216/244 (88%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| || || ||||| || |||||||||| ||||| | Sbjct: 552 tgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccaccc 611 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 612 agtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccca 671 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||| ||| |||| ||||||||||||||| ||||||||||||| ||||||||| ||| Sbjct: 672 ccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcg 731 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 732 tcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggaga 791 Query: 241 agtt 244 |||| Sbjct: 792 agtt 795
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 260 bits (131), Expect = 2e-66 Identities = 215/244 (88%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| || || ||||| || |||||||||| ||||| | Sbjct: 659 tgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccaccc 718 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 719 agtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccca 778 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||| ||| |||| ||||||||||||||| | ||||||||||| ||||||||| ||| Sbjct: 779 ccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcg 838 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 839 tcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggaga 898 Query: 241 agtt 244 |||| Sbjct: 899 agtt 902
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 260 bits (131), Expect = 2e-66 Identities = 215/244 (88%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| || || ||||| || |||||||||| ||||| | Sbjct: 522 tgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccaccc 581 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 582 agtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccca 641 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||| ||| |||| ||||||||||||||| | ||||||||||| ||||||||| ||| Sbjct: 642 ccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcg 701 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 702 tcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggaga 761 Query: 241 agtt 244 |||| Sbjct: 762 agtt 765
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 254 bits (128), Expect = 1e-64 Identities = 214/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| || ||||| || |||||| |||||||||| ||||| | Sbjct: 717 tgtgctgcctcttcatcaacgacctcgacgccggcgcgggtcggatgggcgggaccaccc 776 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||| Sbjct: 777 agtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgccca 836 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| | || || ||||||||||||||||||||||||||||| ||||| | | Sbjct: 837 ccaacgtgcagcttccggggatgtacaacaaggaggagaacccccgtgttcccattatng 896 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| || |||||||| ||||| || || || | ||| ||||| ||||||| Sbjct: 897 tcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatggaga 956 Query: 241 agtt 244 |||| Sbjct: 957 agtt 960
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 252 bits (127), Expect = 4e-64 Identities = 214/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| || ||||| || ||||| |||||||||| || |||| Sbjct: 672 tgtgctgcctcttcatcaacgacctggacgccggcgcggggcggatgggcgggacgacgc 731 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| |||||||||||||||||||||||| || || |||| Sbjct: 732 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgccca 791 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||||||||| || ||||||||| ||| Sbjct: 792 ccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgcgtgcccatcatcg 851 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||||||||| ||||| || || ||||| || || || ||||||| Sbjct: 852 tcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatggaga 911 Query: 241 agtt 244 |||| Sbjct: 912 agtt 915
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 252 bits (127), Expect = 4e-64 Identities = 214/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 700 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 759 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 760 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 819 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 820 ccaacgtgcagctccctgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 879 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 880 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 939 Query: 241 agtt 244 |||| Sbjct: 940 agtt 943
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Minus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 109048 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 108989 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 108988 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 108929 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 108928 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 108869 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 108868 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 108809 Query: 241 agtt 244 |||| Sbjct: 108808 agtt 108805 Score = 97.6 bits (49), Expect = 2e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 47 gggcggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctgatgaacat 106 |||||| || ||||||||||| || ||||||||||||| |||||| || ||||||||||| Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620 Query: 107 cgccgatgcccccaccaacgtgcagntccctggcatgtacaac 149 ||| || |||||||||||||||| |||| || ||||||||| Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Minus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 30925 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 30866 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 30865 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 30806 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 30805 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 30746 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 30745 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 30686 Query: 241 agtt 244 |||| Sbjct: 30685 agtt 30682 Score = 97.6 bits (49), Expect = 2e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 47 gggcggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctgatgaacat 106 |||||| || ||||||||||| || ||||||||||||| |||||| || ||||||||||| Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497 Query: 107 cgccgatgcccccaccaacgtgcagntccctggcatgtacaac 149 ||| || |||||||||||||||| |||| || ||||||||| Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 669 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 728 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 729 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 788 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 789 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 848 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 849 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 908 Query: 241 agtt 244 |||| Sbjct: 909 agtt 912
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 664 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 723 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 724 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 783 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 784 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 843 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 844 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 903 Query: 241 agtt 244 |||| Sbjct: 904 agtt 907
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Minus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 28304187 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 28304128 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 28304127 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 28304068 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 28304067 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 28304008 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 28304007 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 28303948 Query: 241 agtt 244 |||| Sbjct: 28303947 agtt 28303944 Score = 97.6 bits (49), Expect = 2e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 47 gggcggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctgatgaacat 106 |||||| || ||||||||||| || ||||||||||||| |||||| || ||||||||||| Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759 Query: 107 cgccgatgcccccaccaacgtgcagntccctggcatgtacaac 149 ||| || |||||||||||||||| |||| || ||||||||| Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 712 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 771 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 772 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 831 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 832 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 891 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 892 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 951 Query: 241 agtt 244 |||| Sbjct: 952 agtt 955
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 663 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 722 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 723 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 782 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 783 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 842 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 843 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 902 Query: 241 agtt 244 |||| Sbjct: 903 agtt 906
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 701 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 760 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 761 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 820 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 821 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 880 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 881 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 940 Query: 241 agtt 244 |||| Sbjct: 941 agtt 944
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 484 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 543 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 544 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 603 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 604 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 663 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 664 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 723 Query: 241 agtt 244 |||| Sbjct: 724 agtt 727
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Minus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 28286636 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 28286577 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 28286576 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 28286517 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 28286516 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 28286457 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 28286456 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 28286397 Query: 241 agtt 244 |||| Sbjct: 28286396 agtt 28286393 Score = 97.6 bits (49), Expect = 2e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 47 gggcggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctgatgaacat 106 |||||| || ||||||||||| || ||||||||||||| |||||| || ||||||||||| Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208 Query: 107 cgccgatgcccccaccaacgtgcagntccctggcatgtacaac 149 ||| || |||||||||||||||| |||| || ||||||||| Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 705 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 764 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 765 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 824 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 825 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 884 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 885 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 944 Query: 241 agtt 244 |||| Sbjct: 945 agtt 948
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 244 bits (123), Expect = 1e-61 Identities = 213/244 (87%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| | Sbjct: 699 tgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccaccc 758 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 759 agtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaa 818 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| Sbjct: 819 ccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcg 878 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||||| Sbjct: 879 tcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggaga 938 Query: 241 agtt 244 |||| Sbjct: 939 agtt 942
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 228 bits (115), Expect = 6e-57 Identities = 208/240 (86%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||||||||||||||| | ||||| || |||||| | |||||||| ||||| ||||| Sbjct: 282 ctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacccagta 341 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 342 cacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaaccccaccaa 401 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 402 cgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatcgtcac 461 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||||||| Sbjct: 462 cggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggagaagtt 521
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 228 bits (115), Expect = 6e-57 Identities = 208/240 (86%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||||||||||||||| | ||||| || |||||| | |||||||| ||||| ||||| Sbjct: 677 ctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacccagta 736 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 737 cacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaaccccaccaa 796 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 797 cgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatcgtcac 856 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||||||| Sbjct: 857 cggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggagaagtt 916
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 216 bits (109), Expect = 2e-53 Identities = 202/234 (86%) Strand = Plus / Plus Query: 8 cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 67 ||||||||| |||||||| || |||||||| ||| | ||||| |||||||| || ||||| Sbjct: 555 cctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacac 614 Query: 68 cgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgt 127 ||||||||||||||||| || || ||||| ||||||||||||||| |||||||||||| Sbjct: 615 cgtcaacaaccagatggttaatgctaccctcatgaacatcgccgataaccccaccaacgt 674 Query: 128 gcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 187 ||| |||| || |||||||||||||| |||||||||||||| ||||| ||||||| || Sbjct: 675 ccagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactgg 734 Query: 188 taacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaa 241 |||||||||||| || || || |||||||| |||||||| ||||| |||||||| Sbjct: 735 taacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaa 788
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 216 bits (109), Expect = 2e-53 Identities = 199/230 (86%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 ||||| || ||||| || |||||||| ||| | ||||| |||||||| || ||||||||| Sbjct: 560 ttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtc 619 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||| ||| Sbjct: 620 aacaaccagatggttaacgctaccctcatgaacatcgccgataaccccaccaacgtccag 679 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 |||| || |||||||||||||| |||||||||||||| |||||| ||||||| |||||| Sbjct: 680 ctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggtaac 739 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaa 241 |||||||| || || || |||||||| |||||||| ||||| |||||||| Sbjct: 740 gatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaa 789
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 212 bits (107), Expect = 4e-52 Identities = 209/244 (85%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||| |||||||| ||||||||||| |||||||| || ||| | ||||| |||||||| | Sbjct: 734 tgtgttgcctctttatcaacgatctcgacgctggagccggtcgtatgggaggaaccacac 793 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| || |||||||| |||| ||||||||| || ||||||||||| ||| ||||| Sbjct: 794 aatacacagtgaacaaccaaatggtgaacgccacactcatgaacatcgctgataacccca 853 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||| ||| |||| || |||||||||||||| |||||||| ||||| || ||| | | Sbjct: 854 ccaacgttcagctccccggtatgtacaacaaggaagagaaccctcgtgttccgatcattg 913 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||||||||||||||||||||| ||||| || || |||||||| ||||| ||||||| Sbjct: 914 tcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatggaga 973 Query: 241 agtt 244 |||| Sbjct: 974 agtt 977
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 206 bits (104), Expect = 2e-50 Identities = 207/244 (84%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||||||||||||||| | ||||| || |||||| | |||||||| ||||| | Sbjct: 673 tgtgctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccaccc 732 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 733 agtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccca 792 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| |||| || ||||||||||||||||| || | ||||||||| ||| Sbjct: 793 ccaacgtgcagctcccggggatgtacaacaaggaggacaannnnngcgtgcccatcatcg 852 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||| Sbjct: 853 tcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggaga 912 Query: 241 agtt 244 |||| Sbjct: 913 agtt 916
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 237 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 296 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 297 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 356 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 357 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 416 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 417 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 476
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 478
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 243 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 302 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 303 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 362 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 363 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 422 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 423 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 482
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 478
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 231 ctgcctgttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagta 290 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 291 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 350 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 351 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcac 410 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 411 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 470
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 478
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 478
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 478
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 204 bits (103), Expect = 9e-50 Identities = 205/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 241 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 300 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 301 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 360 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 361 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 420 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 421 cggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagtt 480
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 200 bits (101), Expect = 1e-48 Identities = 180/207 (86%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 223 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 282 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 283 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 342 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 343 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcac 402 Query: 185 cggtaacgatttctcgacgctctacgc 211 ||| ||||| ||||| ||||| ||||| Sbjct: 403 cggcaacgacttctccacgctgtacgc 429
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 241 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 300 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 301 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 360 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 361 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 420 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 421 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 480
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 478
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 237 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 296 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 297 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 356 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 357 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 416 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 417 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 476
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 237 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 296 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 297 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 356 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 357 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 416 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 417 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 476
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 239 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 298 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 299 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 358 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 359 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 418 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 419 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 478
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 196 bits (99), Expect = 2e-47 Identities = 204/240 (85%) Strand = Plus / Plus Query: 5 ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 64 |||||| |||||||||||||| ||||| || || || | |||||||| ||||| ||||| Sbjct: 243 ctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagta 302 Query: 65 caccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaa 124 ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 303 cacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaa 362 Query: 125 cgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 184 ||||||| |||| || ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 363 cgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcac 422 Query: 185 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| ||||| Sbjct: 423 cggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagtt 482
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 847 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 906 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 907 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 966 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 967 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 1026 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 1027 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 1082
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 847 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 906 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 907 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 966 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 967 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 1026 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 1027 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 1082
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 876 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 935 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 936 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 995 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 996 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 1055 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 1056 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 1111
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 758 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 817 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 818 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 877 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 878 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 937 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 938 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 993
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Minus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 14441 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 14382 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 14381 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 14322 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 14321 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 14262 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 14261 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 14206
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 761 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 820 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 821 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 880 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 881 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 940 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 941 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 996
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 758 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 817 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 818 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 877 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 878 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 937 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 938 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 993
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 761 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 820 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 821 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 880 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 881 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 940 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 941 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 996
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 188 bits (95), Expect = 6e-45 Identities = 200/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 2842 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 2901 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 2902 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 2961 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 2962 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 3021 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 3022 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 3077
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 180 bits (91), Expect = 1e-42 Identities = 196/232 (84%) Strand = Plus / Plus Query: 13 tcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtca 72 ||||||||||||||||||||||||||||| | ||||| || || || |||||||| |||| Sbjct: 677 tcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtca 736 Query: 73 acaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagn 132 |||||||||||| ||||| || || |||||||| || ||| ||| |||||||| ||| Sbjct: 737 acaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagc 796 Query: 133 tccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacg 192 |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||||||| Sbjct: 797 tcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacg 856 Query: 193 atttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 857 atttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 908
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 180 bits (91), Expect = 1e-42 Identities = 199/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 750 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 809 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 810 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 869 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| | || || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 870 cagcttccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 929 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 930 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 985
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 180 bits (91), Expect = 1e-42 Identities = 199/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 876 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 935 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||| ||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 936 gtcaacaatcagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 995 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 996 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 1055 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 1056 aacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagtt 1111
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 180 bits (91), Expect = 1e-42 Identities = 199/236 (84%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 |||||||||||||||||||| || || || ||| || | || |||||||| || ||||| Sbjct: 758 ctcttcatcaacgatcttgatgcaggagctggtcggcttggtggaaccacccaatacact 817 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 ||||||||||| |||| ||| |||||||| |||||||| || ||| ||| || ||||| Sbjct: 818 gtcaacaaccaaatggtgaatgccaccctcatgaacattgctgataacccgacaaacgtc 877 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| | || || ||||||||||||||||||||||||||||| || ||| | ||||||||| Sbjct: 878 cagcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtcaccggt 937 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || | ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 938 aacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaagtt 993
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 176 bits (89), Expect = 2e-41 Identities = 200/238 (84%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| || | Sbjct: 734 tgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaacaactc 793 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| || ||||||||||||| ||| |||||||| |||||||| || || ||| | Sbjct: 794 aatacactgttaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaa 853 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 | || || ||| ||||||| |||||||||||||| |||||||| |||||||| ||| | | Sbjct: 854 caaatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcattg 913 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatgga 238 |||| |||||||| |||||||| | ||||||||||| |||||||||||||| ||||| Sbjct: 914 tcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatgga 971
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 165 bits (83), Expect = 8e-38 Identities = 197/236 (83%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 742 ctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacact 801 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||||| || || |||||||| || ||| ||| |||||||| Sbjct: 802 gtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtc 861 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||||| |||||| | ||||| |||||| | ||| ||| Sbjct: 862 cagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggt 921 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || | |||| |||||| |||| |||||| || ||||||||||| Sbjct: 922 aacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagtt 977
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 165 bits (83), Expect = 8e-38 Identities = 203/244 (83%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||| | ||||||||||||||||| |||||||| ||||| ||||| ||||| || | Sbjct: 164 tgtgctgcttgttcatcaacgatcttgatgctggtgcaggtagaatgggaggaactacac 223 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| |||||||| ||||||| || || || || |||||||| || ||| ||| | Sbjct: 224 aatacacagtcaacaatcagatggttaatgctacactcatgaacattgctgataacccaa 283 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 |||| || || ||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 284 ccaatgtccaactccctggaatgtacgacaaggaggagaacccccgtgtgcccatcatcg 343 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| || ||||||||||| | || || ||||| || ||||| |||||||| ||||| | Sbjct: 344 tcacaggaaacgatttctcagcactatatgctccccttatccgcgatggtcgtatggaaa 403 Query: 241 agtt 244 |||| Sbjct: 404 agtt 407
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 161 bits (81), Expect = 1e-36 Identities = 139/159 (87%) Strand = Plus / Plus Query: 86 gaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagntccctggcatgta 145 ||||||||||||||||||||||||||| ||| |||||||||||| |||| || ||||| Sbjct: 3 gaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgta 62 Query: 146 caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 205 |||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| Sbjct: 63 caacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgct 122 Query: 206 ctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||| || || |||||||| || || ||||||||||| Sbjct: 123 gtacgcgccgctcatccgtgacgggcgtatggagaagtt 161
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 161 bits (81), Expect = 1e-36 Identities = 165/194 (85%) Strand = Plus / Plus Query: 51 ggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgcc 110 |||||||| || ||||| || ||||||||||||| ||| ||||| || |||||||| || Sbjct: 789 ggaaccacccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgct 848 Query: 111 gatgcccccaccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtg 170 ||| |||||| || |||||| | ||||| |||||||||||||| || ||| |||||||| Sbjct: 849 gataaccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtg 908 Query: 171 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 230 |||||| | ||||| |||||||||||||| || || || |||||||| |||||||||||| Sbjct: 909 cccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggt 968 Query: 231 cgnatggagaagtt 244 || ||||||||||| Sbjct: 969 cgtatggagaagtt 982
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 159 bits (80), Expect = 5e-36 Identities = 194/233 (83%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| ||||| ||||| || | ||||| || ||||| || |||||||| Sbjct: 800 ttcatcaacgatctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtg 859 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| ||||||||||| |||||||| || || ||||||||| || || Sbjct: 860 aacaaccagatggttaacgccaccctcatgaacattgctgacaaccccaccaatgtccaa 919 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 ||||||| |||||||||||| | |||||| ||||||| ||||| ||||||| |||||| Sbjct: 920 ctccctggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaac 979 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 || ||||| || | |||||||| || |||||||||||||| ||||||||||| Sbjct: 980 gacttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagtt 1032
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 159 bits (80), Expect = 5e-36 Identities = 194/233 (83%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| || || || || ||| | ||||| |||||||| || ||||| ||| Sbjct: 183 ttcatcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtc 242 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 |||||||| |||| ||| ||||| || |||||||| || ||| ||||||||| || || Sbjct: 243 aacaaccaaatggtgaatgccacactcatgaacattgctgataaccccaccaatgtccaa 302 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 ||||||| |||||||||||||| || || | |||||||||||| | ||||||||||| Sbjct: 303 ctccctggtatgtacaacaaggaagacaatgctcgtgtgcccatcattgtcaccggtaat 362 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 |||||||| || || || |||||||| |||||||||||||| ||||||||||| Sbjct: 363 gatttctcaacactttatgctcctctcatccgtgatggtcgtatggagaagtt 415
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 159 bits (80), Expect = 5e-36 Identities = 194/233 (83%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 ||||||||||||||||| || || || ||| | | || |||||||| || ||||| || Sbjct: 754 ttcatcaacgatcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtg 813 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| ||| ||||| || |||||||| || ||| ||| || || |||||| Sbjct: 814 aacaaccagatggtgaatgccactctcatgaacattgctgataaccctacaaatgtgcag 873 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 | ||||| |||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 874 cttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaat 933 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 |||||||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 934 gatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaagtt 986
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 141 bits (71), Expect = 1e-30 Identities = 200/244 (81%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || | Sbjct: 56 tgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactaccc 115 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| |||||||||||||||| ||| ||||| || ||||||||||| ||| ||| | Sbjct: 116 aatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccga 175 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 | || || ||| |||| || |||||||||||| | |||||| || | || ||||| | | Sbjct: 176 caaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattattg 235 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| |||||||| ||||| || | || |||||||| |||||||||||||| ||||||| Sbjct: 236 tcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggaga 295 Query: 241 agtt 244 |||| Sbjct: 296 agtt 299
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 141 bits (71), Expect = 1e-30 Identities = 191/232 (82%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| ||||| ||||| || | ||||||| ||||| ||||||||||| Sbjct: 645 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 704 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||| Sbjct: 705 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccgaccaacgtccag 764 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 | || || ||||||| || ||||||| ||| || |||||||| || ||| || ||| Sbjct: 765 ctgcccggtgtgtacaagaacgaggagatccctcgcgtgcccattgtgtgcacgggcaac 824 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagt 243 || ||||| || || ||||| || |||||||| ||||| || |||||||||| Sbjct: 825 gacttctccaccctgtacgcgcccctgatccgcgatggccgcatggagaagt 876
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 139 bits (70), Expect = 5e-30 Identities = 196/239 (82%) Strand = Plus / Plus Query: 6 tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 65 |||||||||||||||||||| || || || || ||||| ||||| ||||| || || ||| Sbjct: 705 tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764 Query: 66 accgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaac 125 || |||||||||||||||| ||| ||||| || |||||||| || ||| ||| || ||| Sbjct: 765 actgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgacaaac 824 Query: 126 gtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 185 || ||| |||| || |||||||||||| | |||||| || | || ||||| | ||||| Sbjct: 825 gtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcact 884 Query: 186 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 |||||||| ||||| || | || |||||||| |||||||||||||| ||||||||||| Sbjct: 885 ggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagtt 943
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 133 bits (67), Expect = 3e-28 Identities = 193/236 (81%) Strand = Plus / Plus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 ||||||||||||||||| || || || || ||||| ||||| ||||| || || |||||| Sbjct: 719 ctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatacacc 778 Query: 69 gtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 128 |||||||||||||||| ||| |||||||| |||||||| || || ||| || || || Sbjct: 779 gtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaacaaatgtc 838 Query: 129 cagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 188 ||| |||| || |||||||||||| | |||||| || | || ||||| | ||||| ||| Sbjct: 839 cagctccccggtatgtacaacaagcaagagaacgccagggtacccattattgtcactggt 898 Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||| ||||| || | || |||||||| |||||||||||||| ||||||||||| Sbjct: 899 aacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagtt 954
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 131 bits (66), Expect = 1e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 156 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 215 |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 1 gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60 Query: 216 ctgatccgtgatggtcgnatggagaagtt 244 ||||||||||||||||| ||||||||||| Sbjct: 61 ctgatccgtgatggtcgtatggagaagtt 89
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 131 bits (66), Expect = 1e-27 Identities = 198/243 (81%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||| |||||||||||||||||| ||||||||||| || | |||||| ||| | Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcaccc 1622 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 ||||||| |||||||||||||||| ||||| ||||| ||||||||||| ||| ||| | Sbjct: 1623 agtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataacccta 1682 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 ||||||||||| | || ||| ||||||| ||| | ||| |||||||| ||||| ||| Sbjct: 1683 ccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtct 1742 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 ||| |||||||||||||| || || ||||| || || |||||||| || || ||||||| Sbjct: 1743 gcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggaga 1802 Query: 241 agt 243 ||| Sbjct: 1803 agt 1805
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 119 bits (60), Expect = 4e-24 Identities = 195/241 (80%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||||||||| || ||||||||||| || || || || ||| | ||||| ||||| || | Sbjct: 734 tgtgctgcctgtttatcaacgatctcgatgccggagctggtcgtatgggtggaacaactc 793 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| || ||||| ||||||| ||| |||||||| |||||||| || || ||| | Sbjct: 794 aatacactgttaacaatcagatggtgaatgccaccctcatgaacatagctgacaacccaa 853 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 | || || ||| | |||||||||||||||||||| |||||||| ||||| |||||| | | Sbjct: 854 caaatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcattg 913 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| |||||||| ||||| || | || || ||||| ||||||||||| || ||||||| Sbjct: 914 tcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatggaga 973 Query: 241 a 241 | Sbjct: 974 a 974
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 119 bits (60), Expect = 4e-24 Identities = 189/233 (81%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| || | ||||| || | ||||| || ||||| || |||||||| Sbjct: 2542 ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 2601 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| |||||||| || |||||||| || || ||| ||||| || || Sbjct: 2602 aacaaccagatggttaacgccacactcatgaacattgctgacaacccaaccaatgtccaa 2661 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 ||||||| |||||||||||| |||| || ||||||| |||||| | || || |||||| Sbjct: 2662 ctccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaac 2721 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 |||||||| || | |||||||| || |||||||||||||| ||||||||||| Sbjct: 2722 gatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagtt 2774
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 115 bits (58), Expect = 7e-23 Identities = 90/101 (89%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| ||||| ||||| || | ||||||| ||||| ||||||||||| Sbjct: 1857 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 1916 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccga 112 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1917 aacaaccagatggtgaacgccaccctgatgaacatcgccga 1957
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 113 bits (57), Expect = 3e-22 Identities = 147/178 (82%) Strand = Plus / Plus Query: 64 acaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccacca 123 |||| |||||||||||||||| ||||||||||| |||||||| || || ||| |||| Sbjct: 1 acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60 Query: 124 acgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 183 | || ||| ||||||| |||||||||||| |||| || | ||||| |||||| |||| | Sbjct: 61 atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120 Query: 184 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaa 241 | |||||||| ||||| || | || |||||||| |||||||||||||| |||||||| Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaa 178
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 111 bits (56), Expect = 1e-21 Identities = 188/233 (80%) Strand = Plus / Plus Query: 12 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 71 |||||||||||||| || | ||||| || | ||||| || ||||| || |||||||| Sbjct: 914 ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 973 Query: 72 aacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 131 ||||||||||||| |||||||| || ||||||| || || ||| ||||| || || Sbjct: 974 aacaaccagatggttaacgccacactcctgaacattgctgacaacccaaccaatgtccaa 1033 Query: 132 ntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 191 ||||||| |||||||||||| |||| || ||||||| |||||| | || || |||||| Sbjct: 1034 ctccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaac 1093 Query: 192 gatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 |||||||| || | |||||||| || |||||||||||||| ||||||||||| Sbjct: 1094 gatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagtt 1146
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 109 bits (55), Expect = 4e-21 Identities = 196/244 (80%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || | Sbjct: 730 tgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactaccc 789 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| ||||||||||| |||| ||| ||||| || |||||||| || || ||| | Sbjct: 790 aatacactgtcaacaaccaaatggtgaatgccactctcatgaacattgctgacaacccga 849 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 | || || ||| |||| || |||||||||||| | ||||| || | || || || ||| Sbjct: 850 caaatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcg 909 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| |||||||||||||| || | || ||||| || |||||||||||||| ||||||| Sbjct: 910 tcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggaga 969 Query: 241 agtt 244 |||| Sbjct: 970 agtt 973
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 101 bits (51), Expect = 1e-18 Identities = 189/236 (80%) Strand = Plus / Plus Query: 6 tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 65 ||||| || ||||| |||||||| || ||||| |||||| | || || || || || ||| Sbjct: 582 tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 641 Query: 66 accgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaac 125 || || |||||||| |||| ||| || ||||| |||||||| || || || ||||| Sbjct: 642 actgtgaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaat 701 Query: 126 gtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 185 || ||| |||| || |||||||||||||| ||||| || ||||| || ||| ||||||| Sbjct: 702 gttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcaca 761 Query: 186 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaa 241 ||||| || |||||||| | ||||||||||| || ||||||||||| |||||||| Sbjct: 762 ggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaa 817
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 101 bits (51), Expect = 1e-18 Identities = 189/236 (80%) Strand = Plus / Plus Query: 6 tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 65 ||||| || ||||| |||||||| || ||||| |||||| | || || || || || ||| Sbjct: 755 tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 814 Query: 66 accgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaac 125 || || |||||||| |||| ||| || ||||| |||||||| || || || ||||| Sbjct: 815 actgtgaacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaat 874 Query: 126 gtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 185 || ||| |||| || |||||||||||||| ||||| || ||||| || ||| ||||||| Sbjct: 875 gttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcaca 934 Query: 186 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaa 241 ||||| || |||||||| | ||||||||||| || ||||||||||| |||||||| Sbjct: 935 ggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaa 990
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 95.6 bits (48), Expect = 6e-17 Identities = 192/241 (79%) Strand = Plus / Plus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 |||| ||||||||||||||||||||||| || || || ||||| ||||| ||||| || | Sbjct: 747 tgtgttgcctcttcatcaacgatcttgatgcaggagccggtagaatgggtggaactacac 806 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccca 120 | ||||| ||||||||||| |||| ||| || || || |||||||| || ||| ||| | Sbjct: 807 aatacactgtcaacaaccaaatggtgaatgctacactcatgaacattgctgataacccga 866 Query: 121 ccaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcg 180 | || || || |||| || |||||||||||| | ||||| || | || || || | | Sbjct: 867 cgaatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacctattattg 926 Query: 181 tcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggaga 240 |||| |||||||||||||| || | || || ||||| |||||||||||||| ||||||| Sbjct: 927 tcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggaga 986 Query: 241 a 241 | Sbjct: 987 a 987
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 87.7 bits (44), Expect = 1e-14 Identities = 85/99 (85%) Strand = Plus / Plus Query: 143 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 202 ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| || Sbjct: 1 gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60 Query: 203 gctctacgctcctctgatccgtgatggtcgnatggagaa 241 | || ||||| || |||||||||||||| |||||||| Sbjct: 61 cttgtatgctccccttatccgtgatggtcgtatggagaa 99
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 81.8 bits (41), Expect = 9e-13 Identities = 164/206 (79%) Strand = Plus / Plus Query: 39 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggngaacgccaccctg 98 ||||| ||||| ||||| || || ||||| ||||||||||| |||| ||| ||||| || Sbjct: 8 ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67 Query: 99 atgaacatcgccgatgcccccaccaacgtgcagntccctggcatgtacaacaaggaggag 158 |||||||| || || ||| || || || ||| |||| || |||||||||||| | ||| Sbjct: 68 atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127 Query: 159 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 218 || || | || || || ||||||| |||||||||||||| || | || ||||| || Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187 Query: 219 atccgtgatggtcgnatggagaagtt 244 |||||||||||||| ||||||||||| Sbjct: 188 atccgtgatggtcgtatggagaagtt 213
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 81.8 bits (41), Expect = 9e-13 Identities = 64/72 (88%) Strand = Plus / Minus Query: 60 cagtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccc 119 |||||||||||||||| ||| ||| || |||||||||||||||||||||||| |||| Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661 Query: 120 accaacgtgcag 131 |||||||||||| Sbjct: 445660 accaacgtgcag 445649
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 69.9 bits (35), Expect = 4e-09 Identities = 88/106 (83%) Strand = Plus / Minus Query: 1 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 60 ||||||| ||||||||||| |||||||| || || || ||||| ||||| || || || | Sbjct: 7159 tgtgctgtctcttcatcaatgatcttgatgcaggagctggtagaatgggtggcactactc 7100 Query: 61 agtacaccgtcaacaaccagatggngaacgccaccctgatgaacat 106 | ||||| |||||||||||||||| || || ||||| |||||||| Sbjct: 7099 aatacacagtcaacaaccagatggtaaatgcaaccctcatgaacat 7054
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 63.9 bits (32), Expect = 2e-07 Identities = 146/185 (78%) Strand = Plus / Plus Query: 60 cagtacaccgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgccccc 119 |||||||| || ||||||||||||| || |||||||| |||||||| || ||| ||| Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546 Query: 120 accaacgtgcagntccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 179 || || || ||| | ||||| |||||||||||||| || || || ||||| || || || Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606 Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 || || || || |||||||| || | || ||||| |||| |||||||| || |||||| Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666 Query: 240 aagtt 244 ||||| Sbjct: 667 aagtt 671
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 61.9 bits (31), Expect = 9e-07 Identities = 175/224 (78%) Strand = Plus / Plus Query: 15 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 74 |||||||||||||| ||||| || || ||| | || || || || |||||||| || || Sbjct: 759 atcaacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaat 818 Query: 75 aaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagntc 134 |||||||||| || || || || |||||||| || || ||| ||||| |||||| | Sbjct: 819 aaccagatggtaaatgctactcttatgaacattgctgacaacccaaccaatgtgcagcta 878 Query: 135 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 194 || |||||||| |||||||| || || ||| | || |||||| | || || |||||||| Sbjct: 879 ccaggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacgac 938 Query: 195 ttctcgacgctctacgctcctctgatccgtgatggtcgnatgga 238 ||||| ||| | || || ||||| || ||||||||||| ||||| Sbjct: 939 ttctcaacgttatatgcacctctcattcgtgatggtcggatgga 982
>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence Length = 262 Score = 54.0 bits (27), Expect = 2e-04 Identities = 121/153 (79%) Strand = Plus / Plus Query: 8 cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 67 |||||||||||| |||||||| || || || ||||| | || ||||| || || || || Sbjct: 36 cctcttcatcaatgatcttgatgcaggggctggtagacttggtggaactacacaatatac 95 Query: 68 cgtcaacaaccagatggngaacgccaccctgatgaacatcgccgatgcccccaccaacgt 127 ||||| |||||||||| ||| || ||||| |||||||| || ||| || || || || Sbjct: 96 agtcaataaccagatggtgaatgcaacccttatgaacattgctgataatccaactaatgt 155 Query: 128 gcagntccctggcatgtacaacaaggaggagaa 160 ||| ||||||| ||||||||||| ||||||| Sbjct: 156 tcagctccctggtatgtacaacaaacaggagaa 188
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Plus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 240 aagtt 244 ||||| Sbjct: 959 aagtt 963
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Plus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 240 aagtt 244 ||||| Sbjct: 925 aagtt 929
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Plus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 240 aagtt 244 ||||| Sbjct: 959 aagtt 963
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Plus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 240 aagtt 244 ||||| Sbjct: 933 aagtt 937
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Plus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 240 aagtt 244 ||||| Sbjct: 946 aagtt 950
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 44.1 bits (22), Expect = 0.20 Identities = 54/65 (83%) Strand = Plus / Minus Query: 180 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggag 239 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 240 aagtt 244 ||||| Sbjct: 97626 aagtt 97622
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 42.1 bits (21), Expect = 0.80 Identities = 47/56 (83%) Strand = Plus / Plus Query: 189 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgnatggagaagtt 244 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagtt 991
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 40.1 bits (20), Expect = 3.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||| Sbjct: 104069 ctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaacacagtacaca 104010 Query: 69 gtcaacaa 76 || ||||| Sbjct: 104009 gtgaacaa 104002
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 40.1 bits (20), Expect = 3.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 9 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 68 |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||| Sbjct: 83094 ctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaacacagtacaca 83035 Query: 69 gtcaacaa 76 || ||||| Sbjct: 83034 gtgaacaa 83027
>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgatgaacatcgccgatgcc 116 |||||||||||||||||||| Sbjct: 1896 tgatgaacatcgccgatgcc 1877
>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1) (apl-1) mRNA, complete cds Length = 2742 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgatgaacatcgccgatgcc 116 |||||||||||||||||||| Sbjct: 1897 tgatgaacatcgccgatgcc 1878
>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence Length = 42802 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgatgaacatcgccgatgcc 116 |||||||||||||||||||| Sbjct: 34318 tgatgaacatcgccgatgcc 34337
>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA complete cds Length = 2742 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgatgaacatcgccgatgcc 116 |||||||||||||||||||| Sbjct: 1882 tgatgaacatcgccgatgcc 1863 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,124,480 Number of Sequences: 3902068 Number of extensions: 1124480 Number of successful extensions: 25684 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 25536 Number of HSP's gapped (non-prelim): 138 length of query: 244 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 222 effective length of database: 17,147,199,772 effective search space: 3806678349384 effective search space used: 3806678349384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
