>YK62_CAEEL (P34341) Hypothetical protein C29E4.2|
          Length = 821

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
 Frame = +2

Query: 119 RDPESNWEVDVAKSLEEYLLKI------CSGEISAEDGAHSFNFAEAALLLQGSVQVYSR 280
           +D   N+ +DV K+L  YL  I         ++ A      F+F  A  ++QGS  VY R
Sbjct: 22  KDLVENFSIDVLKALAGYLEVIRQESEDTDNQVDAATTYRLFDFQRACRIIQGSCAVYGR 81

Query: 281 KVEYLYSLVLHALEFLSQNKQDQQEKGS 364
           KV+++Y L +  ++ +    QD    GS
Sbjct: 82  KVDHVYELTISVVDLVENKGQDDGNTGS 109

>CND2_YEAST (P38170) Condensin complex subunit 2 (Barren homolog) (CAPH|
           homolog)
          Length = 728

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +2

Query: 206 EDGAHSFNFAEAALLLQGSVQVYSRKVEYLYSLVLHALEFLSQNKQDQQEKGSAEANEN- 382
           +DG ++ NF +A+  L G +++YS +V+ + +     L  L+Q K +    G      N 
Sbjct: 38  KDGENNINFQKASATLDGCIKIYSSRVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNG 97

Query: 383 ----GPSATANKEDDICMGL 430
               G S  AN E D   G+
Sbjct: 98  EGLGGDSDEANIEIDPLTGM 117

>IASPP_CAEEL (Q9XVN3) Apoptotic enhancer 1 protein (Inhibitor member of the ASPP|
           family) (Protein iASPP) (Ce-iASPP)
          Length = 769

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = -3

Query: 312 CSTNEYKYSTLRL*T*TDPWSNRAASAKLKLWAPSSAEISPEQILRRYSSRLLATSTSQF 133
           C  N+ KYS L     TDP SN ++ +     AP+    SP    ++ +S  +   +   
Sbjct: 324 CKENQQKYSELSKMASTDPHSNHSSPSTSSQKAPTLITFSPPSFEQKINSSTMTRDSPFV 383

Query: 132 DSGSRFACSI 103
           +  + F  S+
Sbjct: 384 ERPTSFGDSL 393

>MUTL_STAAN (P65492) DNA mismatch repair protein mutL|
          Length = 669

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
 Frame = +2

Query: 140 EVDVAKSLEEYLLKICSGEISAEDGAHSFNFAEAALLLQGSVQVYSRKVEYLYSLVLHAL 319
           +++V  S EE L ++   +I          F +  L+ + ++    +K + LYS     +
Sbjct: 302 KLEVRLSKEEQLYQLIVSKIQEA-------FKDRILIPKNNLDYVPKKNKVLYSFEQQKI 354

Query: 320 EF-LSQNKQDQQEKGSAEANENGPSATANKEDD 415
           EF   QN ++ QEK  +    N  S  A  ++D
Sbjct: 355 EFEQRQNTENNQEKTFSSEESNSKSFMAENQND 387

>MUTL_STAAM (P65491) DNA mismatch repair protein mutL|
          Length = 669

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
 Frame = +2

Query: 140 EVDVAKSLEEYLLKICSGEISAEDGAHSFNFAEAALLLQGSVQVYSRKVEYLYSLVLHAL 319
           +++V  S EE L ++   +I          F +  L+ + ++    +K + LYS     +
Sbjct: 302 KLEVRLSKEEQLYQLIVSKIQEA-------FKDRILIPKNNLDYVPKKNKVLYSFEQQKI 354

Query: 320 EF-LSQNKQDQQEKGSAEANENGPSATANKEDD 415
           EF   QN ++ QEK  +    N  S  A  ++D
Sbjct: 355 EFEQRQNTENNQEKTFSSEESNSKSFMAENQND 387

>CDON_HUMAN (Q4KMG0) Cell adhesion molecule-related/down-regulated by oncogenes|
           precursor
          Length = 1287

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -3

Query: 219 WAPSSAEISPEQILRRYSSRLLATSTSQFDSGSRFACSIGN 97
           W     +I+PE   RR  S L   S    DSG+ ++C  GN
Sbjct: 255 WLKDGQDIAPESNWRRLYSHLATDSVDPADSGN-YSCMAGN 294

>SMC2_XENLA (P50533) Structural maintenance of chromosome 2|
           (Chromosome-associated protein E) (Chromosome assembly
           protein XCAP-E)
          Length = 1203

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 95  RFPILQAN-RDPESNWEVDVAKSLEEYLLKI 184
           RFP LQ   +DPE NW+ D  K L   L+ I
Sbjct: 503 RFPNLQFEYKDPEKNWDSDRVKGLVASLISI 533

>TRPA_CHLTR (O84173) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 253

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 179 KICSGEISAEDGAHSFNFAEAALLLQGSVQV 271
           K+C G ++A DG  S+    A  L+QG V +
Sbjct: 12  KLCIGYLTAGDGGTSYTIEAAKALIQGGVDI 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,000,496
Number of Sequences: 219361
Number of extensions: 1172597
Number of successful extensions: 3357
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3357
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)