>Y4105_ARATH (Q9M158) Putative protein At4g01050|
          Length = 466

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 LSYEEMLRLSSDTAGG-GGDGFSLPDLGLGGLVDFVAQNPLXXXXXXXXXXXXXXXSQVL 381
           L+YEE L+ S  T+     DG       + G+ +FV  NPL               SQVL
Sbjct: 70  LTYEEALQQSMTTSSSFDSDGL------IEGISNFVTDNPLVIAGGVAALAVPFVLSQVL 123

Query: 382 GGAPKPYETVSGKAAYRRLLEEPDAQLVDIRPLKDAREVGSPDI 513
              PK +   S K AY +L  + +AQL+DIR   D R+VGSP+I
Sbjct: 124 NKKPKSWGVESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNI 167

>MARH4_MOUSE (Q80TE3) Membrane-associated RING finger protein 4|
           (Membrane-associated RING-CH protein IV) (MARCH-IV)
          Length = 408

 Score = 30.8 bits (68), Expect(2) = 0.045
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -1

Query: 465 DELRVRLLQKPPVRGLPGHGFVRLGGAAKNLGNDKRHGDHGEA--RGDDERVLRD 307
           ++L+V LL++PP   LP HG  +L G A N       G  G A  RG  E V R+
Sbjct: 46  NDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGWRGPREAVGRE 100



 Score = 24.6 bits (52), Expect(2) = 0.045
 Identities = 17/52 (32%), Positives = 17/52 (32%)
 Frame = -2

Query: 290 PRPRSGRENPSPPPPXXXXXXXXXXXXXXXXXXXALPPFNPSVAKRPAVGPP 135
           PR   GRE P  PPP                    LPP        PA GPP
Sbjct: 93  PREAVGRETPPLPPP------------------PPLPPSGDDDWDGPATGPP 126

>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide
           HQ-34; Peptide KR-11]
          Length = 668

 Score = 35.4 bits (80), Expect = 0.096
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 168 ERGEEA-RRGASKGEAPSPARMFGPXGRAEESASLARRKRRWRPLHYRWR 22
           E GEE   + A+ GE  SP         ++E ASL   KRRWRP H+  R
Sbjct: 233 ESGEETGSQDAAPGEPESPPEGQEAPEESQEDASLEVDKRRWRPRHHHGR 282

>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4|
           (KAISO-like zinc finger protein 1) (KAISO-L1)
          Length = 1013

 Score = 27.7 bits (60), Expect(2) = 0.68
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 299 TNPPRPRSGRENPSPPP 249
           T PPRP   RE P PPP
Sbjct: 511 TAPPRPPKKREYPPPPP 527



 Score = 23.5 bits (49), Expect(2) = 0.68
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = -1

Query: 159 EEARRGASKGEAPSPARMFGPXGRAEESASLARRKRRWRPLHYRWRPAMXAG 4
           E A    S   A SPA   GP        +  R  R  R L Y  +P    G
Sbjct: 528 EPAATPTSPATAVSPATAAGPAMATTTEEAKGRNPRAGRTLTYTAKPVGGIG 579

>PHR_SYNLE (P05327) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 483

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -1

Query: 225 QHLLVGERSGESGAAAIQSERGEEARRGASKGEAPSPARMFGPXGRAEESASLARRKRRW 46
           QHL+ G+ +  +G            +  AS G  P P R+F P  +A++  + A   +RW
Sbjct: 375 QHLVDGDLAANNGGW----------QWSASSGMDPKPLRIFNPASQAKKFDATATYIKRW 424

Query: 45  RP 40
            P
Sbjct: 425 LP 426

>MAML1_HUMAN (Q92585) Mastermind-like protein 1 (Mam-1)|
          Length = 1016

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +3

Query: 6    PPXSPGATGNAMAAIVSSAAPTKLTPPRARXAQTCAQD*APPPWRPHGG 152
            P  S       MA + S+AA   L PP +   +T A   APPP  P  G
Sbjct: 879  PQFSQAVPNRPMAPMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTAPQQG 927

>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 302 STNPPRPRSGRENPSPPPP 246
           S+ PP P  GR  P PPPP
Sbjct: 343 SSTPPLPSPGRSGPLPPPP 361

>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4|
           (Membrane-associated RING-CH protein IV) (MARCH-IV)
           (RING finger protein 174)
          Length = 410

 Score = 26.6 bits (57), Expect(2) = 4.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 465 DELRVRLLQKPPVRGLPGHGFVRLGGAAKN 376
           ++L+V LL++PP   LP HG  +  G A N
Sbjct: 47  NDLKVFLLRRPPQAPLPMHGDPQPPGLAAN 76



 Score = 21.9 bits (45), Expect(2) = 4.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 290 PRPRSGRENPSPPPP 246
           PR   GRE P  PPP
Sbjct: 93  PREVVGREPPPVPPP 107

>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor|
          Length = 910

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
 Frame = -1

Query: 210 GERSG-ESGAAAIQSERGEEARRGASK-------GEAPSPARMFGPXGRAEESASL 67
           GE  G E+G    + E GE++  GAS        GEA  P +  G  G  EE   L
Sbjct: 365 GEEDGSENGEVPFKEESGEDSGDGASSEEEGSTPGEAGEPQKTPGATGHEEEGPQL 420

>CNTN2_CHICK (P28685) Contactin-2 precursor (Axonin-1)|
          Length = 1036

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 117 PARMFGPXGRAEESASLARRKRRWRPLHYRWR 22
           PA    P G AEE  +L  R R   P  YRW+
Sbjct: 38  PAHTLFPEGSAEEKVTLTCRARANPPATYRWK 69

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 71  EADSSARPXGPNMRAGLGAS---PLEAPRRASSPRSD*MAAAPLSPLLSPTR 217
           E D   RP  P  RAG   S   P  APR ++S  S   AA+P +P   P R
Sbjct: 400 EEDEGVRPGAPLARAGPPPSPPAPAAAPRPSASSASSSAAASP-APAPEPAR 450

>AAD16_YEAST (P43546) Putative aryl-alcohol dehydrogenase AAD16 (EC 1.1.1.-)|
          Length = 152

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 148 PWGLQGGGA*SCAHVWAXRARGGV---SFVGAAEETMAAIALPVA 23
           PW + GGG          R + G    SFVGA+E+T A I +  A
Sbjct: 11  PWDVMGGGRFQSKKAMEERRKNGEGIRSFVGASEQTDAEIKISEA 55

>Y4XJ_RHISN (P55702) Hypothetical 44.3 kDa protein y4xJ|
          Length = 423

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 18  PGATGNAMAAIVSSAAPTKLTPPRARXA 101
           PG+  N M+A     AP   TPPRAR A
Sbjct: 379 PGSNPNQMSAPTDRMAPALGTPPRARAA 406

>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 302 STNPPRPRSGRENPSPPPP 246
           S  PP P  GR  P PPPP
Sbjct: 327 SPTPPLPSPGRSGPLPPPP 345

>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 302 STNPPRPRSGRENPSPPPP 246
           S+ PP P  GR  P PPPP
Sbjct: 333 SSAPPLPSPGRSGPLPPPP 351

>AAD15_YEAST (Q08361) Putative aryl-alcohol dehydrogenase AAD15 (EC 1.1.1.-)|
          Length = 143

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 148 PWGLQGGGA*SCAHVWAXRARGGV---SFVGAAEETMAAIALPVA 23
           PW + GGG          R + G    SFVGA+E+T A I +  A
Sbjct: 11  PWDVMGGGRFQSKKAMEERRKNGECIRSFVGASEQTDAEIKISEA 55

>AAD3_YEAST (P25612) Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-)|
          Length = 363

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 148 PWGLQGGGA*SCAHVWAXRARGGV---SFVGAAEETMAAIALPVA 23
           PW + GGG          R + G    SFVGA+E+T A I +  A
Sbjct: 231 PWDVMGGGRFQSKKAMEERRKNGEGIRSFVGASEQTDAEIKISEA 275

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 25.8 bits (55), Expect(2) = 8.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 305 KSTNPPRPRSGRENPSPPP 249
           K    P PR  R +PSPPP
Sbjct: 530 KRQKEPSPRRRRRSPSPPP 548



 Score = 21.6 bits (44), Expect(2) = 8.3
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = -1

Query: 153 ARRGASKGEAPSPARMFGPXGRAEESASLARRKRRWRPLHY 31
           ARR  S    P P R   P      S S   R+R   P  Y
Sbjct: 549 ARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRY 589

>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/62 (27%), Positives = 22/62 (35%)
 Frame = -2

Query: 290 PRPRSGRENPSPPPPXXXXXXXXXXXXXXXXXXXALPPFNPSVAKRPAVGPPRGRRLVLR 111
           P PR+    P+PPPP                    LPP  P+  +     PP   R +  
Sbjct: 178 PAPRATAARPAPPPPPEEAGEDEEGDRPEDDAAPLLPPRAPAKTR-----PPEKARRLAE 232

Query: 110 AC 105
           AC
Sbjct: 233 AC 234

>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 293 PPRPRSGRENPSPPPP 246
           PP P +GR  P PPPP
Sbjct: 369 PPPPATGRSGPLPPPP 384

>GIDA_SYMTH (Q67J34) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 630

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 376 VLGGAPKPYETVSGKAAYRRLLEEPDAQLVDIRPLKDAREVGSPD 510
           V  G+P+PY  ++ +A +R +L + +A L   R  +  RE G  D
Sbjct: 417 VTKGSPEPYRMLTSRAEFRMMLRQDNAHL---RLTEKGREYGLVD 458

>NR1D1_RAT (Q63503) Orphan nuclear receptor NR1D1 (V-erbA-related protein|
           EAR-1) (Rev-erbA-alpha)
          Length = 508

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 323 SGFCATKSTNPPRPRSGRENPSPPP 249
           S  C  +++  P P SG   PSPPP
Sbjct: 126 SSLCPLETSPAPHPTSGSVGPSPPP 150

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 162 GEEARRGASKGEAPSPARMFGPXGRAEESASLARRKRR 49
           G E   G S+G APS A         E+ A++  RKRR
Sbjct: 469 GVEGGHGPSRGAAPSGAAPLPSAASVEQEAAVRPRKRR 506


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.139    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,080,359
Number of Sequences: 219361
Number of extensions: 1404081
Number of successful extensions: 7396
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7279
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)