ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalb22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468115.1| Oryza sativa (japonica cultivar-group), mRNA 434 e-118
2dbj|AK061791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3gb|AY224477.1| Oryza sativa (japonica cultivar-group) isolate 29... 373 e-100
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
5dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
6ref|XM_450925.1| Oryza sativa (japonica cultivar-group), mRNA 101 3e-18
7dbj|AK109671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
9dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
10gb|AY104988.1| Zea mays PCO117307 mRNA sequence 62 2e-06
11gb|BT017915.1| Zea mays clone EL01N0518E08.c mRNA sequence 50 0.009
12emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome;... 44 0.54
13dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 2.1
14ref|NM_118592.2| Arabidopsis thaliana unknown protein AT4G24590 ... 40 8.5
15gb|AC113446.10| Mus musculus chromosome 5, clone RP23-258C6, com... 40 8.5
16gb|AC144927.5| Mus musculus chromosome 5, clone RP23-464P20, com... 40 8.5
17ref|XM_510424.1| PREDICTED: Pan troglodytes similar to unc-13 ho... 40 8.5
18ref|XM_426625.1| PREDICTED: Gallus gallus similar to Ras GTPase-... 40 8.5
19gb|BC073208.1| Xenopus laevis LIM protein prickle b, mRNA (cDNA ... 40 8.5
20gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete se... 40 8.5
21gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, com... 40 8.5
22gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, co... 40 8.5
23gb|AC183669.3| Pan troglodytes BAC clone CH251-549L23 from chrom... 40 8.5
24emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.5
25emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 i... 40 8.5
26gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome... 40 8.5
27gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosom... 40 8.5
28gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, co... 40 8.5
29gb|AY894981.1| Climacteris picumnus clone Cpi1 microsatellite se... 40 8.5
30emb|AL831720.4| Human DNA sequence from clone RP11-441K23 on chr... 40 8.5
31emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chro... 40 8.5
32emb|AL645800.5| Zebrafish DNA sequence from clone XX-184L24 Cont... 40 8.5
33emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ... 40 8.5
34emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, B... 40 8.5
35gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome... 40 8.5
36emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in ... 40 8.5
37emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 i... 40 8.5
38ref|NM_001016939.1| Xenopus tropicalis PRICKLE1 protein (PRICKLE... 40 8.5
39gb|BC098954.1| Xenopus laevis LIM protein prickle, mRNA (cDNA cl... 40 8.5
40emb|BX510938.11| Zebrafish DNA sequence from clone DKEY-92K1 in ... 40 8.5
41gb|AC151819.2| Xenopus tropicalis BAC clone ISB1-243M8 containin... 40 8.5
42dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, c... 40 8.5
43dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, c... 40 8.5
44gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.5
45gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete s... 40 8.5
46gb|AC098827.3| Homo sapiens BAC clone RP11-640B6 from 4, complet... 40 8.5
47ref|XM_939802.1| PREDICTED: Homo sapiens similar to Unc-13 homol... 40 8.5
48ref|XM_085234.6| PREDICTED: Homo sapiens similar to Unc-13 homol... 40 8.5
49gb|AC016546.6| Homo sapiens chromosome 5 clone CTC-232H10, compl... 40 8.5
50gb|AC010867.8| Homo sapiens chromosome 15 clone RP11-390M11 map ... 40 8.5
51gb|AY055473.1| Xenopus laevis LIM protein prickle b mRNA, comple... 40 8.5
52gb|AF387815.1|AF387815 Xenopus laevis LIM protein prickle (PRICK... 40 8.5
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
54gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y... 40 8.5
55dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
56emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, co... 40 8.5
57dbj|AK117386.1| Arabidopsis thaliana At4g24590 mRNA for unknown ... 40 8.5
58emb|BX470160.9| Zebrafish DNA sequence from clone DKEY-25F3 in l... 40 8.5
59gb|AY106369.1| Zea mays PCO141497 mRNA sequence 40 8.5
60dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
61emb|CR761986.2| Xenopus tropicalis finished cDNA, clone TEgg011j18 40 8.5
62emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chr... 40 8.5
63emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 i... 40 8.5 
>ref|XM_468115.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1331

 Score =  434 bits (219), Expect = e-118
 Identities = 387/442 (87%), Gaps = 7/442 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gataacattcagnaagtcagtataccaacatggtgcagtagatgaaaccatatcatggga 60
           ||||| |||||| ||||| ||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 505 gataatattcag-aagtcggtatatcaaaatggtgcagtagatgaaactatatcatggga 563

                                                                       
Query: 61  tatcgtaagtgcagcagatatatggga------tgataagagtatgaatgtaagtgatga 114
           |||| ||||||| ||||| ||||||||      ||| ||| |||||||  | ||||||||
Sbjct: 564 tatcataagtgcggcagacatatgggacgacattgacaagggtatgaacattagtgatga 623

                                                                       
Query: 115 ttcagaggatggatatgttctagttaagcaagaggatatagttgatgggattgcatgctt 174
           |||||||||||||||||||||  |||| |||||||| ||||||||||| |||||| ||||
Sbjct: 624 ttcagaggatggatatgttctcattaaacaagaggacatagttgatggtattgcaagctt 683

                                                                       
Query: 175 catggctgcatacctgctgtcgctgaaagaaactaaggaattgacgcccaatcaacttca 234
           ||||||||||||| |||||||||||||| |||||||||| ||||| || |||||||||||
Sbjct: 684 catggctgcatacttgctgtcgctgaaacaaactaaggacttgacacctaatcaacttca 743

                                                                       
Query: 235 agaagcccttagcaagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatg 294
           | |||| ||||||||||| |||||| |||| ||||||||| |||| |||||||| |||||
Sbjct: 744 acaagctcttagcaagaccttttcagctaagaagaggaaaagcaagcttcagaaagcatg 803

                                                                       
Query: 295 ggctggaacacaagttatttataatgtagcatcatggagtgcgacagctattggtatcta 354
           || ||||||| |||||||||||||| |||||||||||||||| || |||||||| |||||
Sbjct: 804 ggatggaacaaaagttatttataatatagcatcatggagtgcaactgctattggcatcta 863

                                                                       
Query: 355 ccagaatccggcgattctaaaagcagcaacagcggccttctggacatcctgccgcgtggt 414
           ||||||||| || ||||||||||||||||| || ||||||||||| |||||||| || | 
Sbjct: 864 ccagaatccagcaattctaaaagcagcaactgctgccttctggacttcctgccgtgtagc 923

                                 
Query: 415 gtccaagttcctgtgaatagtc 436
            |||||||| ||||||||||||
Sbjct: 924 atccaagtttctgtgaatagtc 945
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>dbj|AK061791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F04, full
           insert sequence
          Length = 1331

 Score =  434 bits (219), Expect = e-118
 Identities = 387/442 (87%), Gaps = 7/442 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gataacattcagnaagtcagtataccaacatggtgcagtagatgaaaccatatcatggga 60
           ||||| |||||| ||||| ||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 505 gataatattcag-aagtcggtatatcaaaatggtgcagtagatgaaactatatcatggga 563

                                                                       
Query: 61  tatcgtaagtgcagcagatatatggga------tgataagagtatgaatgtaagtgatga 114
           |||| ||||||| ||||| ||||||||      ||| ||| |||||||  | ||||||||
Sbjct: 564 tatcataagtgcggcagacatatgggacgacattgacaagggtatgaacattagtgatga 623

                                                                       
Query: 115 ttcagaggatggatatgttctagttaagcaagaggatatagttgatgggattgcatgctt 174
           |||||||||||||||||||||  |||| |||||||| ||||||||||| |||||| ||||
Sbjct: 624 ttcagaggatggatatgttctcattaaacaagaggacatagttgatggtattgcaagctt 683

                                                                       
Query: 175 catggctgcatacctgctgtcgctgaaagaaactaaggaattgacgcccaatcaacttca 234
           ||||||||||||| |||||||||||||| |||||||||| ||||| || |||||||||||
Sbjct: 684 catggctgcatacttgctgtcgctgaaacaaactaaggacttgacacctaatcaacttca 743

                                                                       
Query: 235 agaagcccttagcaagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatg 294
           | |||| ||||||||||| |||||| |||| ||||||||| |||| |||||||| |||||
Sbjct: 744 acaagctcttagcaagaccttttcagctaagaagaggaaaagcaagcttcagaaagcatg 803

                                                                       
Query: 295 ggctggaacacaagttatttataatgtagcatcatggagtgcgacagctattggtatcta 354
           || ||||||| |||||||||||||| |||||||||||||||| || |||||||| |||||
Sbjct: 804 ggatggaacaaaagttatttataatatagcatcatggagtgcaactgctattggcatcta 863

                                                                       
Query: 355 ccagaatccggcgattctaaaagcagcaacagcggccttctggacatcctgccgcgtggt 414
           ||||||||| || ||||||||||||||||| || ||||||||||| |||||||| || | 
Sbjct: 864 ccagaatccagcaattctaaaagcagcaactgctgccttctggacttcctgccgtgtagc 923

                                 
Query: 415 gtccaagttcctgtgaatagtc 436
            |||||||| ||||||||||||
Sbjct: 924 atccaagtttctgtgaatagtc 945
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>gb|AY224477.1| Oryza sativa (japonica cultivar-group) isolate 29089 unknown mRNA
          Length = 1132

 Score =  373 bits (188), Expect = e-100
 Identities = 374/443 (84%), Gaps = 8/443 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gataacattcagnaagtcagtataccaacatggtgcagtagatgaaaccatatcatggga 60
           ||||| |||||| ||||| ||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 532 gataatattcag-aagtcggtatatcaaaatggtgcagtagatgaaactatatcatggga 590

                                                                       
Query: 61  tatcgtaagtgcagcagatatatggga------tgataagagtatgaatgtaagtgatga 114
           |||| ||||||| ||||| ||||||||      ||| ||| |||||||  | ||||||||
Sbjct: 591 tatcataagtgcggcagacatatgggacgacattgacaagggtatgaacattagtgatga 650

                                                                       
Query: 115 ttcagaggatggatatgttctagttaagcaagaggatatagttgatgggattgcatgctt 174
           |||||||||||||||||||||  |||| || ||||| ||||||||||| |||||  ||||
Sbjct: 651 ttcagaggatggatatgttctcattaaacamgaggacatagttgatggtattgcmagctt 710

                                                                       
Query: 175 catggctgcatacctgctgtcgctgaaagaaactaaggaattgacgcccaatcaacttca 234
            |||||||||||| |||||||||||||| ||||||| || ||| | || |||||||||||
Sbjct: 711 satggctgcatacttgctgtcgctgaaacaaactaargacttgrcmcctaatcaacttca 770

                                                                       
Query: 235 agaagcccttagcaagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatg 294
           | |||| ||||||||||| |||| | |||| |||||||||  ||  ||||||||  |  |
Sbjct: 771 acaagctcttagcaagaccttttyagctaagaagaggaaaascamgcttcagaarscwkg 830

                                                                       
Query: 295 ggctggaacacaagttatttataatgtagcatcat-ggagtgcgacagctattggtatct 353
           || ||||||| |||||||||||||| || |||| | ||||||| || |||||||| ||||
Sbjct: 831 ggatggaacaaaagttatttataatatascatcwtgggagtgcaactgctattggcatct 890

                                                                       
Query: 354 accagaatccggcgattctaaaagcagcaacagcggccttctggacatcctgccgcgtgg 413
           |||||||||| || ||||||||||||||||| || ||||||||||| |||||||| || |
Sbjct: 891 accagaatccagcaattctaaaagcagcaactgctgccttctggacttcctgccgtgtag 950

                                  
Query: 414 tgtccaagttcctgtgaatagtc 436
             |||||||| ||||||||||||
Sbjct: 951 catccaagtttctgtgaatagtc 973
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  182 bits (92), Expect = 9e-43
 Identities = 160/183 (87%), Gaps = 6/183 (3%)
 Strand = Plus / Minus

                                                                            
Query: 36       cagtagatgaaaccatatcatgggatatcgtaagtgcagcagatatatggga------tg 89
                ||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||      ||
Sbjct: 33144634 cagtagatgaaactatatcatgggatatcataagtgcggcagacatatgggacgacattg 33144575

                                                                            
Query: 90       ataagagtatgaatgtaagtgatgattcagaggatggatatgttctagttaagcaagagg 149
                | ||| |||||||  | |||||||||||||||||||||||||||||  |||| |||||||
Sbjct: 33144574 acaagggtatgaacattagtgatgattcagaggatggatatgttctcattaaacaagagg 33144515

                                                                            
Query: 150      atatagttgatgggattgcatgcttcatggctgcatacctgctgtcgctgaaagaaacta 209
                | ||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 33144514 acatagttgatggtattgcaagcttcatggctgcatacttgctgtcgctgaaacaaacta 33144455

                   
Query: 210      agg 212
                |||
Sbjct: 33144454 agg 33144452



 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                            
Query: 242      cttagcaagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctgga 301
                ||||||||||| |||||| |||| ||||||||| |||| |||||||| ||||||| ||||
Sbjct: 33144052 cttagcaagaccttttcagctaagaagaggaaaagcaagcttcagaaagcatgggatgga 33143993

                                                               
Query: 302      acacaagttatttataatgtagcatcatggagtgcgacagctattgg 348
                ||| |||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 33143992 acaaaagttatttataatatagcatcatggagtgcaactgctattgg 33143946



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                            
Query: 350      atctaccagaatccggcgattctaaaagcagcaacagcggccttctggacatcctgccgc 409
                |||||||||||||| || ||||||||||||||||| || ||||||||||| |||||||| 
Sbjct: 33143463 atctaccagaatccagcaattctaaaagcagcaactgctgccttctggacttcctgccgt 33143404

                                           
Query: 410      gtggtgtccaagttcctgtgaatagtc 436
                || |  |||||||| ||||||||||||
Sbjct: 33143403 gtagcatccaagtttctgtgaatagtc 33143377
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score =  182 bits (92), Expect = 9e-43
 Identities = 160/183 (87%), Gaps = 6/183 (3%)
 Strand = Plus / Minus

                                                                         
Query: 36    cagtagatgaaaccatatcatgggatatcgtaagtgcagcagatatatggga------tg 89
             ||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||      ||
Sbjct: 60294 cagtagatgaaactatatcatgggatatcataagtgcggcagacatatgggacgacattg 60235

                                                                         
Query: 90    ataagagtatgaatgtaagtgatgattcagaggatggatatgttctagttaagcaagagg 149
             | ||| |||||||  | |||||||||||||||||||||||||||||  |||| |||||||
Sbjct: 60234 acaagggtatgaacattagtgatgattcagaggatggatatgttctcattaaacaagagg 60175

                                                                         
Query: 150   atatagttgatgggattgcatgcttcatggctgcatacctgctgtcgctgaaagaaacta 209
             | ||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 60174 acatagttgatggtattgcaagcttcatggctgcatacttgctgtcgctgaaacaaacta 60115

                
Query: 210   agg 212
             |||
Sbjct: 60114 agg 60112



 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                         
Query: 242   cttagcaagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctgga 301
             ||||||||||| |||||| |||| ||||||||| |||| |||||||| ||||||| ||||
Sbjct: 59712 cttagcaagaccttttcagctaagaagaggaaaagcaagcttcagaaagcatgggatgga 59653

                                                            
Query: 302   acacaagttatttataatgtagcatcatggagtgcgacagctattgg 348
             ||| |||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 59652 acaaaagttatttataatatagcatcatggagtgcaactgctattgg 59606



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 350   atctaccagaatccggcgattctaaaagcagcaacagcggccttctggacatcctgccgc 409
             |||||||||||||| || ||||||||||||||||| || ||||||||||| |||||||| 
Sbjct: 59123 atctaccagaatccagcaattctaaaagcagcaactgctgccttctggacttcctgccgt 59064

                                        
Query: 410   gtggtgtccaagttcctgtgaatagtc 436
             || |  |||||||| ||||||||||||
Sbjct: 59063 gtagcatccaagtttctgtgaatagtc 59037
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>ref|XM_450925.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1093

 Score =  101 bits (51), Expect = 3e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 248 aagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctggaacacaa 307
           ||||| |||||| ||  |||||| ||||| ||||||| ||||||||||  ||| ||| ||
Sbjct: 715 aagacattttcatctcgaaagagaaaaggtaaacttcggaaggcatggaatgggacaaaa 774

                                                                  
Query: 308 gttatttataatgtagcatcatggagtgcgacagctattggtatctaccagaatc 362
           ||||||||||||||||  ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 775 gttatttataatgtagattcatggagtgccacagctattggaatctaccataatc 829
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>dbj|AK109671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B02, full
           insert sequence
          Length = 1093

 Score =  101 bits (51), Expect = 3e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 248 aagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctggaacacaa 307
           ||||| |||||| ||  |||||| ||||| ||||||| ||||||||||  ||| ||| ||
Sbjct: 715 aagacattttcatctcgaaagagaaaaggtaaacttcggaaggcatggaatgggacaaaa 774

                                                                  
Query: 308 gttatttataatgtagcatcatggagtgcgacagctattggtatctaccagaatc 362
           ||||||||||||||||  ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 775 gttatttataatgtagattcatggagtgccacagctattggaatctaccataatc 829
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 248      aagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctggaacacaa 307
                ||||| |||||| ||  |||||| ||||| ||||||| ||||||||||  ||| ||| ||
Sbjct: 17592991 aagacattttcatctcgaaagagaaaaggtaaacttcggaaggcatggaatgggacaaaa 17593050

                                                         
Query: 308      gttatttataatgtagcatcatggagtgcgacagctattgg 348
                ||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 17593051 gttatttataatgtagattcatggagtgccacagctattgg 17593091
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1005_D12
          Length = 150588

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                         
Query: 248   aagactttttcaactaaaaagaggaaaggcaaacttcagaaggcatgggctggaacacaa 307
             ||||| |||||| ||  |||||| ||||| ||||||| ||||||||||  ||| ||| ||
Sbjct: 41713 aagacattttcatctcgaaagagaaaaggtaaacttcggaaggcatggaatgggacaaaa 41772

                                                      
Query: 308   gttatttataatgtagcatcatggagtgcgacagctattgg 348
             ||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 41773 gttatttataatgtagattcatggagtgccacagctattgg 41813
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>gb|AY104988.1| Zea mays PCO117307 mRNA sequence
          Length = 610

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 89/107 (83%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                       
Query: 225 atcaacttcaagaagcccttagcaagactttttcaactaaaaagaggaaaggcaaacttc 284
           ||||||||||| |||| ||||| ||||| |||||| || |||||| |||| | ||| | |
Sbjct: 309 atcaacttcaa-aagcgcttaggaagacgttttcagctgaaaagaagaaaagtaaaatcc 367

                                                          
Query: 285 agaaggcatgggctggaacacaagttatttataatgtagcatcatgg 331
            ||||||||||| ||||||  |||| ||||||||||| || ||||||
Sbjct: 368 ggaaggcatgggatggaactaaagtcatttataatgttgcttcatgg 414
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>gb|BT017915.1| Zea mays clone EL01N0518E08.c mRNA sequence
          Length = 1130

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 117 cagaggatggatatgttctagttaagcaagaggatatagttgatgggat 165
           |||| |||||||||||||| |||||||| || ||| | |||||||||||
Sbjct: 496 cagatgatggatatgttcttgttaagcaggaagatgtggttgatgggat 544
to top
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7
          Length = 346683

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 551    agatcatgcgtcagctcaaacc 572
              ||||||||||||||||||||||
Sbjct: 289221 agatcatgcgtcagctcaaacc 289200
to top
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b,
             complete sequence
          Length = 68747

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    atgataagagtatgaatgtaa 107
             |||||||||||||||||||||
Sbjct: 54674 atgataagagtatgaatgtaa 54654
to top
>ref|NM_118592.2| Arabidopsis thaliana unknown protein AT4G24590 mRNA, complete cds
          Length = 1021

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 306 aagttatttataatgtagcatcatggag 333
           |||||||||| || ||||||||||||||
Sbjct: 715 aagttatttacaacgtagcatcatggag 742
to top
>gb|AC113446.10| Mus musculus chromosome 5, clone RP23-258C6, complete sequence
          Length = 158563

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    aagactttttcaactaaaaa 267
              ||||||||||||||||||||
Sbjct: 145729 aagactttttcaactaaaaa 145710
to top
>gb|AC144927.5| Mus musculus chromosome 5, clone RP23-464P20, complete sequence
          Length = 192593

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   aagactttttcaactaaaaa 267
             ||||||||||||||||||||
Sbjct: 34070 aagactttttcaactaaaaa 34051
to top
>ref|XM_510424.1| PREDICTED: Pan troglodytes similar to unc-13 homolog C; Munc13-3
            (LOC453453), mRNA
          Length = 6486

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  aagtgatgattcagaggatg 125
            ||||||||||||||||||||
Sbjct: 2256 aagtgatgattcagaggatg 2275
to top
>ref|XM_426625.1| PREDICTED: Gallus gallus similar to Ras GTPase-activating protein
           nGAP (RAS protein activator like 1) (LOC429069), mRNA
          Length = 7494

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 168 catgcttcatggctgcatacctgctgtc 195
           |||||||| | |||||||||||||||||
Sbjct: 865 catgcttctttgctgcatacctgctgtc 892
to top
>gb|BC073208.1| Xenopus laevis LIM protein prickle b, mRNA (cDNA clone MGC:80487
            IMAGE:5156646), complete cds
          Length = 4186

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 3705 caagttatttataatgtagc 3724
to top
>gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete sequence
          Length = 161088

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   caagttatttataatgtagc 324
             ||||||||||||||||||||
Sbjct: 41324 caagttatttataatgtagc 41305
to top
>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence
          Length = 182113

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 526   tcatcataggttactttcaactgt 549
             ||||| ||||||||||||||||||
Sbjct: 73647 tcatcttaggttactttcaactgt 73670
to top
>gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, complete sequence
          Length = 232054

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ggcatgggctggaacacaag 308
             ||||||||||||||||||||
Sbjct: 92967 ggcatgggctggaacacaag 92948
to top
>gb|AC183669.3| Pan troglodytes BAC clone CH251-549L23 from chromosome 19, complete
             sequence
          Length = 139061

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   aaaagaggaaaggcaaactt 283
             ||||||||||||||||||||
Sbjct: 51657 aaaagaggaaaggcaaactt 51676
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 405     gccgcgtggtgtccaagttcctgt 428
               |||||| |||||||||||||||||
Sbjct: 4514193 gccgcgcggtgtccaagttcctgt 4514216
to top
>emb|BX908750.17| Zebrafish DNA sequence from clone DKEY-193E13 in linkage group 2,
             complete sequence
          Length = 171327

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gcagatatatgggatgataa 93
             ||||||||||||||||||||
Sbjct: 95405 gcagatatatgggatgataa 95386
to top
>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    tgtacacattgtatgataat 465
              ||||||||||||||||||||
Sbjct: 158361 tgtacacattgtatgataat 158342
to top
>gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosome 7, complete sequence
          Length = 179943

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    gttgatgggattgcatgctt 174
              ||||||||||||||||||||
Sbjct: 111771 gttgatgggattgcatgctt 111790
to top
>gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, complete sequence
          Length = 176345

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 526  tcatcataggttactttcaactgt 549
            ||||| ||||||||||||||||||
Sbjct: 3341 tcatcttaggttactttcaactgt 3364
to top
>gb|AY894981.1| Climacteris picumnus clone Cpi1 microsatellite sequence
          Length = 452

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  atgggatgataagagtatga 101
           ||||||||||||||||||||
Sbjct: 137 atgggatgataagagtatga 118
to top
>emb|AL831720.4| Human DNA sequence from clone RP11-441K23 on chromosome 1, complete
             sequence
          Length = 109218

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gattctaaaagcagcaacag 386
             ||||||||||||||||||||
Sbjct: 11760 gattctaaaagcagcaacag 11779
to top
>emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chromosome 6, complete
             sequence
          Length = 149849

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   gattctaaaagcagcaacag 386
             ||||||||||||||||||||
Sbjct: 78247 gattctaaaagcagcaacag 78228
to top
>emb|AL645800.5| Zebrafish DNA sequence from clone XX-184L24 Contains three novel genes
             and the spi1 gene for transcription factor spi1, complete
             sequence
          Length = 98204

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   agaggaaaggcaaacttcag 286
             ||||||||||||||||||||
Sbjct: 36229 agaggaaaggcaaacttcag 36248
to top
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
          Length = 198402

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 306    aagttatttataatgtagcatcatggag 333
              |||||||||| || ||||||||||||||
Sbjct: 165508 aagttatttacaacgtagcatcatggag 165535
to top
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22K18 (ESSAII
             project)
          Length = 125803

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 306   aagttatttataatgtagcatcatggag 333
             |||||||||| || ||||||||||||||
Sbjct: 83402 aagttatttacaacgtagcatcatggag 83375
to top
>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence
          Length = 201524

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tgtacacattgtatgataat 465
             ||||||||||||||||||||
Sbjct: 53555 tgtacacattgtatgataat 53536
to top
>emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in linkage group 4
           Contains the gene for a novel protein similar to
           vertebrate selenoprotein family, the gene for a novel
           protein similar to vertebrate vascular endothelial
           growth factor (VEGF), the gene for a novel protein
           similar to vertebrate mitogen-activated protein kinase
           family, the gene for a novel protein similar to
           vertebrate mitogen-activated protein kinase family, the
           gene for a novel protein similar to vertebrate scavenger
           receptor protein, two genes for novel proteins similar
           to vertebrate protein deleted in malignant brain tumors
           1, fifteen novel genes and three CpG islands, complete
           sequence
          Length = 264155

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  gcagatatatgggatgataa 93
           ||||||||||||||||||||
Sbjct: 947 gcagatatatgggatgataa 928
to top
>emb|BX649467.5| Zebrafish DNA sequence from clone CH211-117L16 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate mitochondrial ribosomal protein S18A (MRPS18A)
             and two novel genes, complete sequence
          Length = 74769

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gcagatatatgggatgataa 93
             ||||||||||||||||||||
Sbjct: 73716 gcagatatatgggatgataa 73697
to top
>ref|NM_001016939.1| Xenopus tropicalis PRICKLE1 protein (PRICKLE1), mRNA
          Length = 4361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 3844 caagttatttataatgtagc 3863
to top
>gb|BC098954.1| Xenopus laevis LIM protein prickle, mRNA (cDNA clone MGC:114591
            IMAGE:6631640), complete cds
          Length = 4517

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 4023 caagttatttataatgtagc 4042
to top
>emb|BX510938.11| Zebrafish DNA sequence from clone DKEY-92K1 in linkage group 21, complete
              sequence
          Length = 230957

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tttcaactaaaaagaggaaa 274
              ||||||||||||||||||||
Sbjct: 222366 tttcaactaaaaagaggaaa 222385
to top
>gb|AC151819.2| Xenopus tropicalis BAC clone ISB1-243M8 containing hairy2 gene,
             complete cds, complete sequence
          Length = 91756

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   tgaaagaaactaaggaattg 217
             ||||||||||||||||||||
Sbjct: 31293 tgaaagaaactaaggaattg 31312
to top
>dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, complete sequence
          Length = 219969

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 526   tcatcataggttactttcaactgt 549
             ||||| ||||||||||||||||||
Sbjct: 22756 tcatcttaggttactttcaactgt 22779
to top
>dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, complete sequences
          Length = 204391

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 526   tcatcataggttactttcaactgt 549
             ||||| ||||||||||||||||||
Sbjct: 47246 tcatcttaggttactttcaactgt 47223
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 526      tcatcataggttactttcaactgt 549
                ||||| ||||||||||||||||||
Sbjct: 20936241 tcatcttaggttactttcaactgt 20936218
to top
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence
          Length = 128806

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tatgaatgtaagtgatgatt 116
             ||||||||||||||||||||
Sbjct: 93393 tatgaatgtaagtgatgatt 93374
to top
>gb|AC098827.3| Homo sapiens BAC clone RP11-640B6 from 4, complete sequence
          Length = 200914

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gattctaaaagcagcaacag 386
             ||||||||||||||||||||
Sbjct: 95327 gattctaaaagcagcaacag 95346
to top
>ref|XM_939802.1| PREDICTED: Homo sapiens similar to Unc-13 homolog C (Munc13-3)
            (LOC650716), mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  aagtgatgattcagaggatg 125
            ||||||||||||||||||||
Sbjct: 2301 aagtgatgattcagaggatg 2320
to top
>ref|XM_085234.6| PREDICTED: Homo sapiens similar to Unc-13 homolog C (Munc13-3)
            (LOC645760), mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  aagtgatgattcagaggatg 125
            ||||||||||||||||||||
Sbjct: 2301 aagtgatgattcagaggatg 2320
to top
>gb|AC016546.6| Homo sapiens chromosome 5 clone CTC-232H10, complete sequence
          Length = 109918

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 185   tacctgctgtcgctgaaagaaact 208
             ||||||||||| ||||||||||||
Sbjct: 62941 tacctgctgtccctgaaagaaact 62964
to top
>gb|AC010867.8| Homo sapiens chromosome 15 clone RP11-390M11 map 15q21.3, complete
             sequence
          Length = 221631

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aagtgatgattcagaggatg 125
             ||||||||||||||||||||
Sbjct: 28277 aagtgatgattcagaggatg 28296
to top
>gb|AY055473.1| Xenopus laevis LIM protein prickle b mRNA, complete cds
          Length = 4174

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 3694 caagttatttataatgtagc 3713
to top
>gb|AF387815.1|AF387815 Xenopus laevis LIM protein prickle (PRICKLE) mRNA, complete cds
          Length = 4579

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 4082 caagttatttataatgtagc 4101
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     attcagaggatggatatgtt 133
               ||||||||||||||||||||
Sbjct: 6826814 attcagaggatggatatgtt 6826795
to top
>gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y, complete sequence
          Length = 176524

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 526   tcatcataggttactttcaactgt 549
             ||||| ||||||||||||||||||
Sbjct: 67289 tcatcttaggttactttcaactgt 67312
to top
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0592C06
          Length = 160071

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    attcagaggatggatatgtt 133
              ||||||||||||||||||||
Sbjct: 120948 attcagaggatggatatgtt 120929
to top
>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    aagactttttcaactaaaaa 267
              ||||||||||||||||||||
Sbjct: 120398 aagactttttcaactaaaaa 120379
to top
>dbj|AK117386.1| Arabidopsis thaliana At4g24590 mRNA for unknown protein, complete
           cds, clone: RAFL16-97-A12
          Length = 1021

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 306 aagttatttataatgtagcatcatggag 333
           |||||||||| || ||||||||||||||
Sbjct: 715 aagttatttacaacgtagcatcatggag 742
to top
>emb|BX470160.9| Zebrafish DNA sequence from clone DKEY-25F3 in linkage group 18, complete
              sequence
          Length = 207501

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    agactttttcaactaaaaag 268
              ||||||||||||||||||||
Sbjct: 178332 agactttttcaactaaaaag 178313
to top
>gb|AY106369.1| Zea mays PCO141497 mRNA sequence
          Length = 669

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 116 tcagaggatggatatgttctagttaagcaagaggat 151
           ||||| ||||||||||| || |||||||| ||||||
Sbjct: 628 tcagatgatggatatgtactggttaagcaggaggat 663
to top
>dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-25I9, complete
              sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gattctaaaagcagcaacag 386
              ||||||||||||||||||||
Sbjct: 149316 gattctaaaagcagcaacag 149297
to top
>emb|CR761986.2| Xenopus tropicalis finished cDNA, clone TEgg011j18
          Length = 4361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  caagttatttataatgtagc 324
            ||||||||||||||||||||
Sbjct: 3844 caagttatttataatgtagc 3863
to top
>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete
              sequence
          Length = 178673

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    gttgatgggattgcatgctt 174
              ||||||||||||||||||||
Sbjct: 166331 gttgatgggattgcatgctt 166312
to top
>emb|BX465204.5| Zebrafish DNA sequence from clone CH211-160N19 in linkage group 22,
             complete sequence
          Length = 168776

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gcagatatatgggatgataa 93
             ||||||||||||||||||||
Sbjct: 94745 gcagatatatgggatgataa 94726


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,495,240
Number of Sequences: 3902068
Number of extensions: 5495240
Number of successful extensions: 95237
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95033
Number of HSP's gapped (non-prelim): 203
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top