ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baald10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain... 43 7e-04
2RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain... 43 0.001
3RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain... 42 0.002
4RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chai... 40 0.004
5RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chai... 40 0.004
6RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chai... 39 0.013
7RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chai... 39 0.013
8RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chai... 38 0.029
9RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain... 37 0.050
10RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain... 36 0.085
11RPOC_LEPIN (Q8F0S3) DNA-directed RNA polymerase beta' chain (EC ... 35 0.14
12RPOC_LEPIC (Q72UA7) DNA-directed RNA polymerase beta' chain (EC ... 35 0.14
13RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chai... 35 0.14
14RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chai... 35 0.14
15RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chai... 35 0.14
16RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chai... 35 0.19
17RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chai... 35 0.25
18RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chai... 35 0.25
19RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chai... 34 0.32
20RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chai... 30 0.54
21RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chai... 33 0.55
22RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain... 33 0.72
23RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small cha... 33 0.72
24RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small cha... 33 0.72
25RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain ... 33 0.94
26RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small cha... 32 1.2
27RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain... 32 1.6
28RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chai... 32 1.6
29RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chai... 32 1.6
30RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chai... 32 1.6
31RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain ... 32 2.1
32ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disint... 32 2.1
33ALGE_PSEAE (P18895) Alginate production protein algE precursor 31 2.7
34RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain... 31 2.7
35WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... 31 3.6
36RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain,... 31 3.6
37LIPA_HAEIN (P44463) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 30 4.6
38R4RL1_MOUSE (Q8K0S5) Reticulon-4 receptor-like 1 precursor (Nogo... 30 6.1
39DDLB_ECOLI (P07862) D-alanine--D-alanine ligase B (EC 6.3.2.4) (... 30 6.1
40V2R_CANFA (O77808) Vasopressin V2 receptor (Renal-type arginine ... 30 6.1
41RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain... 30 6.1
42M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kina... 30 6.1
43RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain... 30 6.1
44RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chai... 30 6.1
45DDLB_SHIFL (Q83MF7) D-alanine--D-alanine ligase B (EC 6.3.2.4) (... 30 6.1
46RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chai... 30 6.1
47DDLB_ECO57 (Q8X9Y6) D-alanine--D-alanine ligase B (EC 6.3.2.4) (... 30 7.9
48RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain... 30 7.9
49RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chai... 30 7.9
50RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chai... 30 7.9
51RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chai... 30 7.9
52RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chai... 30 7.9
53RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chai... 30 7.9
54RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain... 30 7.9
55RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chai... 30 7.9
56RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain... 30 7.9
57RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chai... 30 7.9
58RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chai... 30 7.9 
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 175

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 47/126 (37%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAGLPVS                 IRCMQVWPIEG    +  S  P    
Sbjct: 13  VAPFQGLKS-TAGLPVSRRSNGASLGSVSNGGR-IRCMQVWPIEGIKKFETLSYLP---- 66

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGFILSVSTTHSPWVLRWARYWTMWEAAL 393
              ST G  L +VDYL        CL  ++ +GFI       SP      RYWTMW+  +
Sbjct: 67  -PLSTEG-LLKQVDYL-IRSKWVPCLEFRK-VGFIFREHNV-SPGYYD-GRYWTMWKLPM 120

Query: 394 MFRDAP 411
               AP
Sbjct: 121 FGCPAP 126
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>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 170

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 49/161 (30%), Positives = 63/161 (39%), Gaps = 22/161 (13%)
 Frame = +1

Query: 10  PTVXGLVRPPXVRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEGHQXS 189
           PTV        V  F G  S TA LPV+                 IRCMQVWP  G++  
Sbjct: 3   PTVMMASSATAVAPFQGLKS-TASLPVARRSSRSLGNVSNGG--RIRCMQVWPAYGNKKF 59

Query: 190 SXTPVFTCHHFSTGGPPLS------RVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPW 348
                          PPLS      +VDYL  L +G + CL   + +GF+   ++T SP 
Sbjct: 60  ETLSYL---------PPLSTDDLLKQVDYL--LRNGWIPCLEFSK-VGFVYRENST-SPC 106

Query: 349 VLRWARYWTMWEAALM---------------FRDAPDAHHR 426
                RYWTMW+  +                 +  PDA HR
Sbjct: 107 YYD-GRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHR 146
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>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 174

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 42/117 (35%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAGLPVS                 IRCMQVWPIEG    +  S  P  + 
Sbjct: 13  VAPFQGLKS-TAGLPVSRRSNASSASVSNGG--RIRCMQVWPIEGIKKFETLSYLPPLST 69

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L +VDYL        CL   + +GFI       SP      RYWTMW+
Sbjct: 70  EAL------LKQVDYL-IRSKWVPCLEFSK-VGFIFREHNA-SPGYYD-GRYWTMWK 116
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>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PW9)
          Length = 175

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAGLP+S                 IRCMQVWPIEG    +  S  P  + 
Sbjct: 13  VAPFQGLKS-TAGLPISCRSGSTGLSSVSNGGR-IRCMQVWPIEGIKKFETLSYLPPLST 70

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L +VDYL        CL   + +GF+     + SP      RYWTMW+
Sbjct: 71  EAL------LKQVDYL-IRSKWVPCLEFSK-VGFVFREHNS-SPGYYD-GRYWTMWK 117
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>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PWS4.3)
          Length = 174

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAGLPVS                 IRCMQVWPIEG    +  S  P  + 
Sbjct: 13  VAPFQGLKS-TAGLPVSRRSRGSLGSVSNGG--RIRCMQVWPIEGIKKFETLSYLPPLST 69

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
              S       +VDYL        CL   + +GF+     + SP      RYWTMW+
Sbjct: 70  EALS------KQVDYL-IRSKWVPCLEFSK-VGFVFREHNS-SPGYYD-GRYWTMWK 116
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>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 172

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +1

Query: 145 IRCMQVWPIEG---HQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGF 315
           IRCMQVWPIEG    +  S  P  T          L +++YL P      CL   + +GF
Sbjct: 43  IRCMQVWPIEGIKKFETLSYLPPLTVEDL------LKQIEYLAPF-QVVPCLEFSK-VGF 94

Query: 316 ILSVSTTHSPWVLRWARYWTMWE 384
           +      H        RYWTMW+
Sbjct: 95  V--YRENHKSPGYYDGRYWTMWK 115
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>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit C)
          Length = 175

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAG+PV+                 IRCMQVWPIEG    +  S  P  T 
Sbjct: 13  VAPFQGLKS-TAGMPVARRSGNSSFGNVSNGGR-IRCMQVWPIEGIKKFETLSYLPPLTV 70

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L +++YL  L S  + CL   + +GF+       SP      RYWTMW+
Sbjct: 71  EDL------LKQIEYL--LRSKWVPCLEFSK-VGFVYR-ENHRSPGYYD-GRYWTMWK 117
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>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1) (LESS17)
          Length = 181

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
 Frame = +1

Query: 13  TVXGLVRPPXVRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQ 183
           T   + +   V  F G  S  A  PV+                 +RCMQVWP   ++ ++
Sbjct: 13  TRSNVAQASMVAPFTGLKSA-ASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYE 71

Query: 184 XSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRW 360
             S  P  +          LS ++YL  L +G + CL  +   GF+   + + SP     
Sbjct: 72  TLSYLPDLSDEQL------LSEIEYL--LKNGWVPCLEFETERGFVYRENNS-SPGYYD- 121

Query: 361 ARYWTMWE 384
            RYWTMW+
Sbjct: 122 GRYWTMWK 129
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>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 37.0 bits (84), Expect = 0.050
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWP---IEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           +RCMQVWP   ++ ++  S  P  +          LS ++YL  L +G + CL  +   G
Sbjct: 55  VRCMQVWPPINMKKYETLSYLPDLSSEQL------LSEIEYL--LKNGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+    T+ SP      RYWTMW+
Sbjct: 107 FVYREHTS-SPGYYD-GRYWTMWK 128
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>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 168

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
 Frame = +1

Query: 52  FPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEGH---QXSSXTPVFTCHHF 222
           F G  S TA LPV+                 IRCMQVWP  G+   +  S  P  T    
Sbjct: 16  FQGLKS-TASLPVARRSTTSLAKVSNGG--RIRCMQVWPAYGNKKFETLSYLPPLTQEQL 72

Query: 223 STGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                 L +VDYL  L +  + CL   +  GF+   ++T SP      RYWTMW+
Sbjct: 73  ------LKQVDYL--LRNNWVPCLEFSKE-GFVYRENST-SPCYYD-GRYWTMWK 116
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>RPOC_LEPIN (Q8F0S3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 634 PANGHFICGPHRPV--SLFYALAGLPXQPWVGLKA 536
           PANGH ICGP + +   ++Y  + LP +P V LK+
Sbjct: 482 PANGHPICGPTQDIVLGIYYLTSELPSEPGVPLKS 516
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>RPOC_LEPIC (Q72UA7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 634 PANGHFICGPHRPV--SLFYALAGLPXQPWVGLKA 536
           PANGH ICGP + +   ++Y  + LP +P V LK+
Sbjct: 482 PANGHPICGPTQDIVLGIYYLTSELPSEPGVPLKS 516
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>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 181

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
 Frame = +1

Query: 13  TVXGLVRPPXVRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQ 183
           T   + +   V  F G  S  A  PV+                 +RCMQVWP   ++ ++
Sbjct: 13  TRSNVAQASMVAPFTGLKSA-ASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYE 71

Query: 184 XSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRW 360
             S  P  +          L  V+YL  L +G + CL  +   GF+      H       
Sbjct: 72  TLSYLPDLSDEQL------LKEVEYL--LKNGWVPCLEFETEHGFV--YRENHKSPGYYD 121

Query: 361 ARYWTMWE 384
            RYWTMW+
Sbjct: 122 GRYWTMWK 129
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>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit A)
          Length = 175

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S TAGLPVS                 I+ MQVWPIEG    +  S  P  T 
Sbjct: 13  VAPFQGLKS-TAGLPVSRRSTNSGFGNVSNGGR-IKFMQVWPIEGIKKFETLSYLPPLTV 70

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L +++YL  L S  + CL   + +GF+       SP      RYWTMW+
Sbjct: 71  EDL------LKQIEYL--LRSKWVPCLEFSK-VGFVYR-ENHRSPGYYD-GRYWTMWK 117
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>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit C)
          Length = 181

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
 Frame = +1

Query: 13  TVXGLVRPPXVRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQ 183
           T   + +   V  F G  S  A  PV+                 +RCMQVWP   ++ ++
Sbjct: 13  TRSNVAQASMVAPFTGLKSA-ASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYE 71

Query: 184 XSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRW 360
             S  P  +          L  V+YL  L +G + CL  +   GF+     + SP     
Sbjct: 72  TLSYLPDLSDEQL------LKEVEYL--LKNGWVPCLEFETEHGFVYREHNS-SPGYYD- 121

Query: 361 ARYWTMWE 384
            RYWTMW+
Sbjct: 122 GRYWTMWK 129
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>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 8B)
          Length = 180

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPI---EGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP    + ++  S  P  +          LS ++YL  L SG + CL  +   G
Sbjct: 55  VQCMQVWPPINKKKYETLSYLPDLSQEQL------LSEIEYL--LKSGWVPCLEFETERG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+      HSP      RYWTMW+
Sbjct: 107 FVYR-EHHHSPGYYD-GRYWTMWK 128
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>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2C)
          Length = 180

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQXSSXTPVFTC 213
           V  F G  S TA  PVS                 +RCMQVWP   ++ ++  S  P  + 
Sbjct: 23  VAPFTGLKS-TASFPVSRKQNLDITSIASNGGR-VRCMQVWPPINMKKYETLSYLPDLSD 80

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L  V+YL  L +G + CL  +   GF+       SP      RYWTMW+
Sbjct: 81  EQL------LKEVEYL--LKNGWVPCLEFETEHGFVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 181

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWP---IEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           +RCMQVWP   ++ ++  S  P  T          L  V+YL  L +G + CL  +   G
Sbjct: 56  VRCMQVWPPINMKKYETLSYLPDLTDEQL------LKEVEYL--LKNGWVPCLEFETEHG 107

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+      H        RYWTMW+
Sbjct: 108 FV--YRENHKSPGYYDGRYWTMWK 129
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>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2B)
          Length = 180

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQXSSXTPVFTC 213
           V  F G  S TA  PVS                 +RCMQVWP   ++ ++  S  P  + 
Sbjct: 23  VGPFTGLKS-TASFPVSRKQNLDITSIASNGGR-VRCMQVWPPINMKKYETLSYLPDLSD 80

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    L  V+YL  L +G + CL  +   GF+       SP      RYWTMW+
Sbjct: 81  EQL------LKEVEYL--LKNGWVPCLEFETEHGFVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 183

 Score = 30.0 bits (66), Expect(2) = 0.54
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGL--GFI 318
           ++CMQVWP          PV        G      + YL PL    L  +VQ  L  G+I
Sbjct: 57  VQCMQVWP----------PV--------GKKKFETLSYLPPLSDAQLLAQVQYLLNKGWI 98

Query: 319 LSVS-TTHSPWVLRW---------ARYWTMWE 384
             +      P+V R           RYWTMW+
Sbjct: 99  PCIEFELEHPFVYRENHRSPGYQDGRYWTMWK 130



 Score = 22.3 bits (46), Expect(2) = 0.54
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 473 AYVRIIRIRQHGVRVQCVSFIRLQAHPGL 559
           A++RII    +  +VQCVSFI  +   GL
Sbjct: 156 AFIRIIGF-DNKRQVQCVSFIAYKPAGGL 183
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>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2A)
          Length = 180

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWP---IEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           +RCMQVWP   ++ ++  S  P  +          L  V+YL  L +G + CL  +   G
Sbjct: 55  VRCMQVWPPINMKKYETLSYLPDLSDEQL------LKEVEYL--LKNGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+       SP      RYWTMW+
Sbjct: 107 FVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSR------VDYLDPLPSGCL-CLRVQQ 303
           +RCMQVWP EG +                 PPL+R      VDYL  + +G + C+   +
Sbjct: 54  VRCMQVWPPEGKKKFETLSYL---------PPLTREQLGQEVDYL--IRNGWIPCIEFCK 102

Query: 304 GLGFILSVSTTHSPWVLRWARYWTMWE 384
            +GF+      H+       RYWTMW+
Sbjct: 103 -VGFV--YREYHNSPGYYDGRYWTMWK 126
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>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3B)
          Length = 180

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQXSSXTPVFTC 213
           V  F G  S TA  PVS                 + CMQVWP   ++ ++  S  P  + 
Sbjct: 23  VAPFTGLKS-TASFPVSRKQNLDITSIASNGGR-VSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    LS ++YL  L +G + CL  +   GF+   +  H        RYWTMW+
Sbjct: 81  EQL------LSEIEYL--LKNGWVPCLEFETEHGFVYREN--HKSPGYYDGRYWTMWK 128
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>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3A/3C)
          Length = 180

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWP---IEGHQXSSXTPVFTC 213
           V  F G  S TA  PVS                 + CMQVWP   ++ ++  S  P  + 
Sbjct: 23  VAPFTGLKS-TASFPVSRKQNLDITSIASNGGR-VSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
                    LS ++YL  L +G + CL  +   GF+   +  H        RYWTMW+
Sbjct: 81  EQL------LSEIEYL--LKNGWVPCLEFETEHGFVYREN--HKSPGYYDGRYWTMWK 128
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>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3A)
          Length = 180

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 37/126 (29%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
 Frame = +1

Query: 28  VRPPXVRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEGHQXSSXTPVF 207
           V+   V  F G  S T G PV                  ++CMQVWP  G +        
Sbjct: 19  VQSAAVAPFGGLKSMT-GFPVKKVNTDITSITSNGG--RVKCMQVWPPIGKKKFETLSYL 75

Query: 208 TCHHFSTGGPPLSR------VDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWAR 366
                    PPL+R      V+YL  L  G + CL  +   GF+       SP      R
Sbjct: 76  ---------PPLTRDQLLKEVEYL--LRKGWVPCLEFELEKGFVYR-EHNKSPGYYD-GR 122

Query: 367 YWTMWE 384
           YWTMW+
Sbjct: 123 YWTMWK 128
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>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2A) (LESS 5)
          Length = 180

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWP---IEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           + CMQVWP   ++ ++  S  P  +          LS ++YL  L +G + CL  +   G
Sbjct: 55  VSCMQVWPPINMKKYETLSYLPDLSDEQL------LSEIEYL--LKNGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+       SP      RYWTMW+
Sbjct: 107 FVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
           (TSSU3-8)
          Length = 180

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPI---EGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP    + ++  S  P  +          LS V+YL  L +G + CL  +   G
Sbjct: 55  VQCMQVWPPINKKKYETLSYLPDLSQEQL------LSEVEYL--LKNGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+       SP      RYWTMW+
Sbjct: 107 FVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU11A)
          Length = 180

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPIEG---HQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP  G   ++  S  P  T          L  ++YL  L  G + CL  +   G
Sbjct: 55  VQCMQVWPPYGKKKYETLSYLPDLTDEQL------LKEIEYL--LNKGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+      H+       RYWTMW+
Sbjct: 107 FV--YREYHASPRYYDGRYWTMWK 128
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>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU8)
          Length = 180

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPIEG---HQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP  G   ++  S  P  T          L  ++YL  L  G + CL  +   G
Sbjct: 55  VQCMQVWPPYGKKKYETLSYLPDLTDEQL------LKEIEYL--LNKGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+      H+       RYWTMW+
Sbjct: 107 FV--YREYHASPRYYDGRYWTMWK 128
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>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPI---EGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP    + ++  S  P  +          LS V+YL  L +G + CL  +   G
Sbjct: 55  VQCMQVWPPINKKKYETLSYLPDLSQEQL------LSEVEYL--LKNGWVPCLEFETEHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+       SP      RYWTMW+
Sbjct: 107 FVYR-ENNKSPGYYD-GRYWTMWK 128
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>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3C) (PSS15)
          Length = 180

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSR------VDYLDPLPSGCL-CLRVQQ 303
           ++CMQVWP  G +                 PPL+R      V+YL  L  G + CL  + 
Sbjct: 55  VKCMQVWPPIGKKKFETLSYL---------PPLTRDQLLKEVEYL--LRKGWVPCLEFEL 103

Query: 304 GLGFILSVSTTHSPWVLRWARYWTMWE 384
             GF+       SP      RYWTMW+
Sbjct: 104 EKGFVYR-EHNKSPGYYD-GRYWTMWK 128
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>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1224

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = +1

Query: 337  HSPWVLRW-ARYWTMWEAALMFRDAPDAHHRCSTRWREGQXREYPGRVCPHHSDSTTWRQ 513
            H P  L+W    W+        R       +C+ ++  G+ RE   + C H    +   +
Sbjct: 1048 HKPKKLQWLVSAWSQCSVTCE-RGTQKRFLKCAEKYVSGKYRELASKKCSHLPKPSLELE 1106

Query: 514  GAVRQLHSPSSPPRAAXGVRQG 579
             A   L  P  PP AA G  +G
Sbjct: 1107 RACAPLPCPRHPPFAAAGPSRG 1128
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>ALGE_PSEAE (P18895) Alginate production protein algE precursor|
          Length = 490

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 240 FKQGRLP*SASKWVPLPSSSARFGFHSFREHNAFSLGT 353
           FKQG LP S S++V  PS+  RF    F+  +A+  GT
Sbjct: 438 FKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGT 475
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>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEGH---QXSSXTPVFTC 213
           V  F G  S +AG PV+                 + CMQVWP  G    +  S  P  T 
Sbjct: 23  VAPFTGLKS-SAGFPVTKKTNNDITSIASNGGR-VNCMQVWPPVGKKKFETLSYLPPLTE 80

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWEAA 390
              +        V+YL  +  G + CL  +   GF+       SP      RYWTMW   
Sbjct: 81  EQLA------KEVEYL--IRKGWIPCLEFELEKGFVYR-ENHRSPGYYD-GRYWTMWRLP 130

Query: 391 L 393
           L
Sbjct: 131 L 131
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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein|
            kinase with no lysine 2) (Protein kinase,
            lysine-deficient 2)
          Length = 2297

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 493  PNDADIRVQGTPXLDPPSTSLSTCGGRRVHPET*G 389
            P D D    G    +PP + + T GG+  HP+T G
Sbjct: 1725 PTDRDGGEAGESSAEPPPSDMGTVGGQASHPQTLG 1759
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>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1)
           (Fragment)
          Length = 136

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSR------VDYLDPLPSGCL-CLRVQQ 303
           ++CMQVWP  G +                 PPL+R      V+YL  L  G + CL  + 
Sbjct: 11  VKCMQVWPPIGKKKFETLSYL---------PPLTRDQLLKEVEYL--LRKGWVPCLEFEL 59

Query: 304 GLGFILSVSTTHSPWVLRWARYWTMWE 384
             GF+       SP      RYWTMW+
Sbjct: 60  LKGFVYG-EHNKSPRYYD-GRYWTMWK 84
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>LIPA_HAEIN (P44463) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)|
           (Lipoate synthase) (Lipoyl-acyl-carrier protein
           synthase) (Sulfur insertion protein lipA) (Lip-syn)
          Length = 320

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
 Frame = +3

Query: 147 QVHAGVAHRGASXKFEXPCLYLPPLQH--GRPSFKQGRLP*SASKWVPLPSSSARFGFHS 320
           ++  GV +R A+     P   + P Q    +P + + +LP S++K   + +   R G HS
Sbjct: 6   KMERGVKYRDAAKTSIIPVKNIDPNQDLLKKPEWMKIKLPASSAKIESIKNGMRRHGLHS 65

Query: 321 FRE-------HNAFSLGTTMGPVLDNVGSCPYVSGCTRRPP 422
             E       H  F+ GT    +L  +        CTRR P
Sbjct: 66  VCEEASCPNLHECFNHGTATFMILGAI--------CTRRCP 98
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>R4RL1_MOUSE (Q8K0S5) Reticulon-4 receptor-like 1 precursor (Nogo-66 receptor|
           homolog 2) (Nogo-66 receptor-related protein 3) (NgR3)
           (Nogo receptor-like 2)
          Length = 445

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
 Frame = +1

Query: 373 TMWEAALMFRDAPDAHHRCSTRWREGQX---------REYPGRVCPHH--SDSTTWRQGA 519
           ++WE    FR +  A    +   R+GQ          R   G V PH   S + T    A
Sbjct: 265 SLWEWLRRFRGSSSAVPCATPELRQGQDLKLLRVEDFRNCTGPVSPHQIKSHTLTTSDRA 324

Query: 520 VRQLHSPSSPPRAAXGVRQGHKTGS 594
            R+ H PS       G   GH  GS
Sbjct: 325 ARKEHHPSHGASRDKGHPHGHPPGS 349
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>DDLB_ECOLI (P07862) D-alanine--D-alanine ligase B (EC 6.3.2.4)|
           (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B)
          Length = 305

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -1

Query: 589 LFYALAGLPXQPWVGLKANEADALHPDAMLSNPNDADIRVQGTPXLDPPSTSLSTCGGRR 410
           L +  AGLP  PWV L   E      +  LS+   A+I   G P +  PS   S+ G  +
Sbjct: 101 LLWQGAGLPVAPWVALTRAEF-----EKGLSDKQLAEISALGLPVIVKPSREGSSVGMSK 155

Query: 409 VHPE 398
           V  E
Sbjct: 156 VVAE 159
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>V2R_CANFA (O77808) Vasopressin V2 receptor (Renal-type arginine vasopressin|
           receptor) (Antidiuretic hormone receptor) (AVPR V2)
          Length = 370

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 523 RQLHSP--SSPPRAAXGVRQGHKTGSLDDGAHI*SA 624
           R++HS     P   A G R GH+TGS  +GA + +A
Sbjct: 229 REIHSSLVPGPAERAGGCRGGHRTGSPSEGARVSAA 264
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>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
 Frame = +1

Query: 52  FPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEGH---QXSSXTPVFTCHHF 222
           F G  S +AG PV+                 + CMQVWP  G    +  S  P  T    
Sbjct: 25  FTGLKS-SAGFPVTKKNNDITSITSNGS--RVNCMQVWPPVGKKKFETLSYLPPLTDEQL 81

Query: 223 STGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWEAAL 393
                 L  V+YL  L  G + C+  +   GF+     + SP      RYWTMW   L
Sbjct: 82  ------LKEVEYL--LRKGWVPCVEFELEKGFVHRQYNS-SPGYYD-GRYWTMWRLPL 129
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>M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kinase 1 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
           (MEKK 1)
          Length = 1493

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 13/74 (17%)
 Frame = +1

Query: 418 HHRCSTRWREGQXREYPGRVCP-------------HHSDSTTWRQGAVRQLHSPSSPPRA 558
           HH C + W E   R     +CP             H   S      ++R +  PSSP + 
Sbjct: 463 HHHCMSIWAEECRRNREPLICPLCRSKWRSHDFYSHELSSPVESPASLRAVQQPSSPQQP 522

Query: 559 AXGVRQGHKTGSLD 600
             G ++ ++  S +
Sbjct: 523 VAGSQRRNQESSFN 536
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>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 183

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYLDPLPSGCLCLRVQQG 306
           ++CMQVWP  G +                 PPLS       VDYL    +   CL  +  
Sbjct: 58  VQCMQVWPPLGLKKFETLSYL---------PPLSSESLAKEVDYL-LRKNWVPCLEFELE 107

Query: 307 LGFILSVSTTHSPWVLRWARYWTMWE 384
            GF+       SP      RYWTMW+
Sbjct: 108 TGFVYR-ENHRSPGYYD-GRYWTMWK 131
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>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 180

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGL--GFI 318
           ++CMQVWP          PV        G      + YL PL    L  +VQ  L  G+I
Sbjct: 55  VQCMQVWP----------PV--------GKKKFETLSYLPPLSDAQLLAQVQYLLNNGWI 96

Query: 319 LSVS-TTHSPWVLRW---------ARYWTMWE 384
             +      P+V R           RYWTMW+
Sbjct: 97  PCIEFELEHPFVYRENHRSPGYQDGRYWTMWK 128
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>DDLB_SHIFL (Q83MF7) D-alanine--D-alanine ligase B (EC 6.3.2.4)|
           (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B)
          Length = 306

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -1

Query: 589 LFYALAGLPXQPWVGLKANEADALHPDAMLSNPNDADIRVQGTPXLDPPSTSLSTCGGRR 410
           L +  AGLP  PWV L   E      +  LS+   A+I   G P +  PS   S+ G  +
Sbjct: 102 LLWQGAGLPVAPWVALTRAEF-----EKGLSDKQLAEISALGLPVIVKPSREGSSVGMSK 156

Query: 409 VHPE 398
           V  E
Sbjct: 157 VVAE 160
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>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 184

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGL--GFI 318
           ++CMQVWP          PV        G      + YL PL    L  +VQ  L  G+I
Sbjct: 58  VQCMQVWP----------PV--------GKKKFETLSYLPPLSDAQLLAQVQYLLNKGWI 99

Query: 319 LSVS-TTHSPWVLRW---------ARYWTMWE 384
             +      P+V R           RYWTMW+
Sbjct: 100 PCIEFELEHPFVYRENHRSPGYQDGRYWTMWK 131
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>DDLB_ECO57 (Q8X9Y6) D-alanine--D-alanine ligase B (EC 6.3.2.4)|
           (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B)
          Length = 305

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -1

Query: 589 LFYALAGLPXQPWVGLKANEADALHPDAMLSNPNDADIRVQGTPXLDPPSTSLSTCGGRR 410
           L +  AGLP  PWV L   E      +  LS+   A+I   G P +  PS   S+ G  +
Sbjct: 101 LLWQGAGLPVAPWVALTRVEF-----EKGLSDKQLAEISALGLPVIVKPSREGSSVGMSK 155

Query: 409 VHPE 398
           V  E
Sbjct: 156 VVAE 159
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>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 189

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
 Frame = +1

Query: 43  VRSFPGXSSXTAGLPVSXXXXXXXXXXXXXXWXGIRCMQVWPIEG---HQXSSXTPVFTC 213
           V  F G  S +AG P++                 ++CM+VWP  G    +  S  P  + 
Sbjct: 25  VAPFTGLKS-SAGFPITRKNNVDITTLASNAGK-VQCMKVWPPLGLRKFETLSYLPDMSN 82

Query: 214 HHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLGFILSVSTTHSPWVLRWARYWTMWE 384
              S         DYL  L +G + C+    G GF+   +  H        RYWTMW+
Sbjct: 83  EQLS------KECDYL--LRNGWVPCVEFDIGSGFVYREN--HRSPGFYDGRYWTMWK 130
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>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU5B)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 55  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 101

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+      H+       RYWTMW+
Sbjct: 102 SKE-GFV--YRENHASPGYYDGRYWTMWK 127
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>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU5A)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 55  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 101

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+      H+       RYWTMW+
Sbjct: 102 SKE-GFV--YRENHASPGYYDGRYWTMWK 127
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>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU40B)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 55  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 101

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+      H+       RYWTMW+
Sbjct: 102 SKE-GFV--YRENHASPGYYDGRYWTMWK 127
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>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU40A)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 55  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 101

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+      H+       RYWTMW+
Sbjct: 102 SKE-GFV--YRENHASPGYYDGRYWTMWK 127
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>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU26)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 55  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 101

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+      H+       RYWTMW+
Sbjct: 102 SKE-GFV--YRENHASPGYYDGRYWTMWK 127
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>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 181

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +1

Query: 145 IRCMQVWP---IEGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCLCLRVQQGLGF 315
           ++CM+VWP   ++ ++  S  P  +    S        +DYL        CL  +   GF
Sbjct: 55  VQCMKVWPPIGLKKYETLSYLPPLSDEALS------KEIDYLIR-NKWIPCLEFELEHGF 107

Query: 316 ILSVSTTHSPWVLRWARYWTMWE 384
           +      HSP      RYWTMW+
Sbjct: 108 VYR-EHHHSPGYYD-GRYWTMWK 128
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>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit S41)
          Length = 181

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPI---EGHQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CMQVWP    + ++  S  P  +          L  V+YL  L +G + CL  +   G
Sbjct: 56  VQCMQVWPPINKKKYETLSYLPDLSEEQL------LREVEYL--LKNGWVPCLEFETEHG 107

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+       SP      RYWTMW+
Sbjct: 108 FVYR-ENNKSPGYYD-GRYWTMWK 129
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>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYLDPLPSGCL-CLRVQQ 303
           ++CMQVWP  G +                 PPLS       VDYL  L    + CL  + 
Sbjct: 57  VQCMQVWPPLGLKKFETLSYL---------PPLSSEQLAKEVDYL--LRKNLIPCLEFEL 105

Query: 304 GLGFILSVSTTHSPWVLRWARYWTMWE 384
             GF+       SP      RYWTMW+
Sbjct: 106 EHGFVYR-EHNRSPGYYD-GRYWTMWK 130
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>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 180

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +1

Query: 145 IRCMQVWPIEG---HQXSSXTPVFTCHHFSTGGPPLSRVDYLDPLPSGCL-CLRVQQGLG 312
           ++CM+VWP +    ++  S  P  T    +       +VDYL  L +  + CL  +   G
Sbjct: 55  VQCMKVWPTQNMKRYETLSYLPPLTTDQLAR------QVDYL--LNNKWVPCLEFETDHG 106

Query: 313 FILSVSTTHSPWVLRWARYWTMWE 384
           F+      H+       RYWTMW+
Sbjct: 107 FVYREH--HNSPGYYDGRYWTMWK 128
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>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU1)
          Length = 173

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
 Frame = +1

Query: 145 IRCMQVWPIEGHQXSSXTPVFTCHHFSTGGPPLS------RVDYL---DPLPSGCLCLRV 297
           + CMQVWP EG +                 PPLS       VDYL   D +P    C+  
Sbjct: 51  VSCMQVWPPEGLKKFETLSYL---------PPLSVEDLAKEVDYLLRNDWVP----CIEF 97

Query: 298 QQGLGFILSVSTTHSPWVLRWARYWTMWE 384
            +  GF+   +   SP      RYWTMW+
Sbjct: 98  SKE-GFVYRENNA-SPGYYD-GRYWTMWK 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,463,023
Number of Sequences: 219361
Number of extensions: 2104320
Number of successful extensions: 5298
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 5012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5213
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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