ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc16 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 285 bits (730), Expect = 6e-77 Identities = 135/154 (87%), Positives = 146/154 (94%) Frame = +3 Query: 165 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 344 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60 Query: 345 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHER 524 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHER Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120 Query: 525 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLV 626 DV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLV Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLV 154
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 282 bits (722), Expect = 5e-76 Identities = 134/154 (87%), Positives = 145/154 (94%) Frame = +3 Query: 165 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 344 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60 Query: 345 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHER 524 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHER Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120 Query: 525 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLV 626 DV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLV Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLV 154
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 202 bits (514), Expect = 7e-52 Identities = 90/149 (60%), Positives = 123/149 (82%) Frame = +3 Query: 180 MLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 359 + +FN DG+LEAI+RG + G+L++ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+ Sbjct: 12 LFTFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPI 71 Query: 360 HTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNEL 539 HTTTI EK T KLV E+ H+ QA EPLSTF+ +I+YG+MIDNVVL++TGTLHERD++EL Sbjct: 72 HTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISEL 131 Query: 540 LEKCHPLGMFDSIASLAVAQNMRELYRLV 626 ++KCHPLG+F S+A+L+V N+ +LY V Sbjct: 132 VDKCHPLGLFKSMATLSVVHNVADLYNNV 160
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 174 bits (441), Expect = 2e-43 Identities = 80/146 (54%), Positives = 108/146 (73%) Frame = +3 Query: 189 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 368 FNI +G+LE + RG + G+L QADY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 8 FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVS 67 Query: 369 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEK 548 I +K KLV E++HM A EPLS FL +ITYG+MIDN++L++TGTLH+R ++EL+ K Sbjct: 68 VIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPK 127 Query: 549 CHPLGMFDSIASLAVAQNMRELYRLV 626 CHPLG F+ + ++ VA ELY V Sbjct: 128 CHPLGSFEQMEAIHVASTPAELYNAV 153
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 171 bits (433), Expect = 2e-42 Identities = 77/148 (52%), Positives = 112/148 (75%) Frame = +3 Query: 183 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 362 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 363 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 542 + I +K K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 543 EKCHPLGMFDSIASLAVAQNMRELYRLV 626 KCHPLG F+ + ++ +AQ ELY + Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAI 154
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 171 bits (432), Expect = 2e-42 Identities = 78/146 (53%), Positives = 108/146 (73%) Frame = +3 Query: 189 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 368 FNI G+LE + RG + G+L Q+DY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 6 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65 Query: 369 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEK 548 TI +K KLV E++H+ + EPLSTFL +ITY +MIDN++L++TGTLH+R ++EL+ K Sbjct: 66 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 125 Query: 549 CHPLGMFDSIASLAVAQNMRELYRLV 626 CHPLG F+ + ++ VA ELY V Sbjct: 126 CHPLGSFEQMEAIHVAATPAELYNAV 151
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 170 bits (430), Expect = 4e-42 Identities = 76/148 (51%), Positives = 112/148 (75%) Frame = +3 Query: 183 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 362 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 363 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 542 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 543 EKCHPLGMFDSIASLAVAQNMRELYRLV 626 KCHPLG F+ + ++ +AQ ELY + Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAI 154
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 170 bits (430), Expect = 4e-42 Identities = 76/148 (51%), Positives = 112/148 (75%) Frame = +3 Query: 183 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 362 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 363 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 542 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 543 EKCHPLGMFDSIASLAVAQNMRELYRLV 626 KCHPLG F+ + ++ +AQ ELY + Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAI 154
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 170 bits (430), Expect = 4e-42 Identities = 76/148 (51%), Positives = 112/148 (75%) Frame = +3 Query: 183 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 362 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 363 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELL 542 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELV 126 Query: 543 EKCHPLGMFDSIASLAVAQNMRELYRLV 626 KCHPLG F+ + ++ +AQ ELY + Sbjct: 127 PKCHPLGSFEQMEAVNIAQTPAELYNAI 154
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 154 bits (389), Expect = 2e-37 Identities = 73/150 (48%), Positives = 104/150 (69%) Frame = +3 Query: 177 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 356 E L FN+++G++E IVRG R+ LLT +Y N+ QCE++DD+K+ L YG +L + P Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60 Query: 357 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNE 536 T+ + K T KLV E++++ A L+ F+ Y+TYG+MIDNV L++TGTLHERD E Sbjct: 61 PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRE 120 Query: 537 LLEKCHPLGMFDSIASLAVAQNMRELYRLV 626 LLE+CHPLG F+++ L VA N+ ELY V Sbjct: 121 LLERCHPLGWFETMPVLCVATNIEELYNSV 150
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 154 bits (388), Expect = 3e-37 Identities = 74/150 (49%), Positives = 112/150 (74%) Frame = +3 Query: 177 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 356 + LSFN + G++EA+VRG S LL Q Y+NL QCE+L+D ++ LS+T+YG +L N+ S Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60 Query: 357 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNE 536 L ++ I K T KL+DE+ + QA+E LS F+ YITY +MIDN++L++TGT++ +D ++ Sbjct: 61 LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHD 120 Query: 537 LLEKCHPLGMFDSIASLAVAQNMRELYRLV 626 LLE+CHPLG F+++ +L VA N+ ELY +V Sbjct: 121 LLERCHPLGWFETLPALCVATNVEELYSVV 150
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 149 bits (377), Expect = 5e-36 Identities = 69/151 (45%), Positives = 109/151 (72%), Gaps = 1/151 (0%) Frame = +3 Query: 177 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 356 E + FNI +GF+E +VRG R+GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61 Query: 357 LHTTTIVEK-CTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVN 533 TT+++++ + KL E+ ++ Q++ F+ YITYG+MIDNV L++TGT+H+RD Sbjct: 62 SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKG 121 Query: 534 ELLEKCHPLGMFDSIASLAVAQNMRELYRLV 626 E+L++CHPLG FD++ +L+VA ++ LY V Sbjct: 122 EILQRCHPLGWFDTLPTLSVATDLESLYETV 152
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 122 bits (305), Expect = 1e-27 Identities = 59/147 (40%), Positives = 92/147 (62%), Gaps = 1/147 (0%) Frame = +3 Query: 189 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 368 FN G+LEA+ RG ++G+L +DY NL QCE+L+D+ + + T+YG E S + Sbjct: 5 FNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA-PSV 63 Query: 369 TIVEKCTL-KLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLE 545 ++E+C +L+ +Y ++ + EPL+TF+++I Y MIDNV L+V G + R + LL Sbjct: 64 EVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLR 123 Query: 546 KCHPLGMFDSIASLAVAQNMRELYRLV 626 CHPLG FD + ++ VA N EL+ V Sbjct: 124 MCHPLGEFDQLGAIEVASNSAELFDAV 150
>VATC_DESSY (O06502) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 364 Score = 37.0 bits (84), Expect = 0.048 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Frame = +3 Query: 216 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 395 A ++ + LLT+ +N L + TL + ++L T+Y YL + S +T VEK + Sbjct: 38 ARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEKALER 95 Query: 396 -LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MF 569 L Y+ M + F + + G + N+ +V L ++ + + LG M Sbjct: 96 ALAGTYELMFKILPKRSKGFFELLLEGWDVRNIANVVKAKLANEPASDYVVE---LGTML 152 Query: 570 DSIASLAVAQNMREL 614 + ++A A+ + E+ Sbjct: 153 PKVKAMAEAKTLEEI 167
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 33.5 bits (75), Expect = 0.53 Identities = 27/90 (30%), Positives = 32/90 (35%) Frame = +2 Query: 68 PHPQARTPSRICXXXXXXXXXXXXXXXSGENQDVLVGDAVVQHPRWVPGGDRAGEPLGTP 247 P P R P R G++Q V +V Q WVPGG LGTP Sbjct: 753 PRPAERQPLR---AATGTWVEAETIPDKGDSQASQVTTSVTQLSTWVPGG-----ALGTP 804 Query: 248 HPSRLQQPLPVRDPRRHQDAPLRHRVRSIP 337 PS +Q +P AP V P Sbjct: 805 TPSVPEQGIPEAREEAQVTAPTNVLVTPAP 834
>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 420 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/54 (42%), Positives = 27/54 (50%) Frame = -2 Query: 248 EESRAVPPHDRLQEPIVDVERQHLPRVHLGSHRRKDLGRGEGDREAASCRSGRE 87 EE AVP H +PI DVE + +V +GS GR REAA GRE Sbjct: 271 EEQVAVPHHPDNVKPISDVEGTEINQVFIGSCTN---GRLSDLREAAKYLKGRE 321
>CHRD_MOUSE (Q9Z0E2) Chordin precursor| Length = 948 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 114 LPIPLASAEILPPVRTKMYSWEMLSFNIH 200 LP+PLA A +LPPVR++ LS + H Sbjct: 530 LPVPLAGALVLPPVRSQAAGHAWLSLDTH 558
>VATC_METJA (Q57672) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 381 Score = 32.0 bits (71), Expect = 1.5 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 3/141 (2%) Frame = +3 Query: 207 FLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKC 386 ++ A +R + L A N L + +L+++ L T+YG Y+ + L VEK Sbjct: 39 YVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEKA 98 Query: 387 -TLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG 563 + L D Y + + + L+ I N+ ++ E PLG Sbjct: 99 LDMYLADLYGLIYRISPDSAKKVLKVFAKKFDIKNIKTLIRAKFVGLSAEETYALLIPLG 158 Query: 564 MF--DSIASLAVAQNMRELYR 620 + + LA + + E+ R Sbjct: 159 NIPVEKLKELAEVKTVEEVVR 179
>RUMA_PSEPK (Q88MB9) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 452 Score = 31.6 bits (70), Expect = 2.0 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -2 Query: 176 PRVHLGSHRRKDLGRGEGDREAASCRSGREFALADAVEIFXLSARIRXSQGKVV 15 P+V +G +R D+ R GD + GR + ++ A+ + AR+ ++GKVV Sbjct: 21 PQVPVGKKQRLDIERLAGDGRGIAFLDGRTWFVSGALAGEAVEARVLNARGKVV 74
>VATC_PYRKO (Q5JDR9) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 365 Score = 31.2 bits (69), Expect = 2.6 Identities = 29/133 (21%), Positives = 52/133 (39%) Frame = +3 Query: 216 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 395 A VR + LLT+ +N L + TL + L T+Y L N S I Sbjct: 39 ARVRAMEAKLLTEQRFNELAESRTLQNFVASLEDTDYKETLSN-VSSYSVEEIERALDAS 97 Query: 396 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 575 L Y+ M + F + + + N+ +V L ++ + + P M Sbjct: 98 LAKTYELMFKILPKRSRDFFRLMMEEWDVRNIANVVKAKLANEPASDYIIELGP--MLPK 155 Query: 576 IASLAVAQNMREL 614 + ++A A+ + E+ Sbjct: 156 VKAMAEAKTLEEI 168
>VATC_PYRAB (Q9UXU5) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.8 bits (68), Expect = 3.4 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%) Frame = +3 Query: 216 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 395 A +R + LLT ++ L + ++L + + L T+YG L + S + + L Sbjct: 40 ARIRAMEARLLTDQRFSELAESKSLQNFVVSLEDTDYGKRLTSLQS-YNIEDVERALDLS 98 Query: 396 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MFD 572 LVD + M+ + + + + + N++ +V L + + P G M Sbjct: 99 LVDVIELMVKIMPKRIKGLFEIMLEEWDVRNIINVVKAKLSNMPPQDFI---MPAGKMLQ 155 Query: 573 SIASLAVAQNMREL 614 + ++A A+ M E+ Sbjct: 156 KVKAMAEAKTMEEM 169
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 30.8 bits (68), Expect = 3.4 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 114 LPIPLASAEILPPVRTKMYSWEMLSFNIH 200 LP+PLA A +LPPV+++ LS + H Sbjct: 534 LPVPLAGALVLPPVKSQAAGHAWLSLDTH 562
>SIM_DROME (P05709) Protein single-minded| Length = 697 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +2 Query: 227 GEPLGTPHPSRLQ-QPLPVRDPRRHQDAPLRHRVRSIPPERTFSLAHNNNRREVH 388 G+P+G P L P DP + PL+ V +PP S + NNN H Sbjct: 466 GQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSSSSSNNNNGVWH 520
>VATC_PYRHO (O57726) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%) Frame = +3 Query: 216 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 395 A +R + LLT ++ L + +TL + + L T+Y P L + S + I L Sbjct: 40 ARIRAMEARLLTDQRFSELAESKTLQNFVVSLEDTDYSPRLASLQS-YNLYEIERALDLS 98 Query: 396 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLG-MFD 572 LVD + M+ + + + + + N+ ++ L + + P G MF Sbjct: 99 LVDLVELMIKIMPKRIRGLFEILLEEWDVRNITNVIKAKLSNLPPQDFI---IPAGRMFP 155 Query: 573 SIASLAVAQNMREL 614 + ++ ++ M E+ Sbjct: 156 KVKAMVESKTMEEI 169
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 884 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = -2 Query: 617 VKLTHILSNCKRC----------NAIKHAQWMAFLQQFIDISFMQCPSNNKDNIIDHVSI 468 +++ H++ N C N ++ Q+ +FLQ+ I+++ CP D +I++ + Sbjct: 781 MQIDHVVKNISECYKSAFKDLSINVTQNMQFHSFLQRIIEMTVSGCPITKCDPLIEY-EV 839 Query: 467 RYVL 456 R+ + Sbjct: 840 RFTI 843
>PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 775 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = +2 Query: 164 DVLVGDAVVQHPRWVPGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQ 301 D LV A + PRW+P G AGE L +PLP R P RH+ Sbjct: 565 DALVMQAAMPDPRWMP-GQAAGERL---------EPLPPR-PGRHR 599
>CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144)| Length = 246 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Frame = +2 Query: 212 GGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAP------LRHRVRSIPPE 343 GGD +P GTP PS+ + D R +AP LRHR ++ PE Sbjct: 36 GGDPLPQPSGTPTPSQPSAAMAATDSMR-GEAPGAETPSLRHRGQAAQPE 84
>COPG_SCHPO (P87140) Probable coatomer subunit gamma (Gamma-coat protein)| (Gamma-COP) Length = 905 Score = 29.3 bits (64), Expect = 10.0 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = +3 Query: 276 QCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDE-YKHMLCQANEPLSTF 452 + E L+ ++ EYGP L++ PSP+ T + +K+V +K L + +T Sbjct: 642 ETEFLNALESVSEFNEYGPVLKSSPSPIELTEQETEFVVKVVKHVFKDHLVVQFQLHNTL 701 Query: 453 LQYITYGHMIDNVVLIVTGTLHERDVNELLEKC 551 + I ++N V++ T + ++L+E+C Sbjct: 702 SEVI-----LENAVVVSTPS-----TDDLVEEC 724 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,694,374 Number of Sequences: 219361 Number of extensions: 2092985 Number of successful extensions: 6639 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6627 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
