Clone Name	baalc07
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1245	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1245	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	1078	0.0
4	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	835	0.0
5	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	787	0.0
6	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	787	0.0
7	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	735	0.0
8	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	448	e-122
9	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	432	e-118
10	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	424	e-115
11	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	424	e-115
12	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
13	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
14	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
15	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
16	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	424	e-115
17	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	424	e-115
18	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	394	e-106
19	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	389	e-105
20	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
21	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
22	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	383	e-103
23	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	383	e-103
24	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	357	3e-95
25	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	357	3e-95
26	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	349	7e-93
27	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	349	7e-93
28	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	2e-87
29	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	303	4e-79
30	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	295	1e-76
31	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	280	6e-72
32	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	280	6e-72
33	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	280	6e-72
34	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	280	6e-72
35	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	280	6e-72
36	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	280	6e-72
37	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	280	6e-72
38	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	280	6e-72
39	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	280	6e-72
40	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	272	1e-69
41	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	272	1e-69
42	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	272	1e-69
43	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	266	9e-68
44	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	266	9e-68
45	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	264	3e-67
46	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	260	5e-66
47	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	260	5e-66
48	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	260	5e-66
49	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	260	5e-66
50	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	260	5e-66
51	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	260	5e-66
52	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	260	5e-66
53	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	260	5e-66
54	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	252	1e-63
55	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	252	1e-63
56	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	252	1e-63
57	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	252	1e-63
58	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	252	1e-63
59	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	252	1e-63
60	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	252	1e-63
61	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	244	3e-61
62	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	244	3e-61
63	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	242	1e-60
64	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	240	5e-60
65	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	228	2e-56
66	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	198	2e-47
67	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	190	4e-45
68	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	190	4e-45
69	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	188	2e-44
70	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	184	3e-43
71	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	184	3e-43
72	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	180	4e-42
73	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	176	6e-41
74	emb|Y10657.1|CLRCAGENE C.littorale rca gene	168	2e-38
75	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	168	2e-38
76	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	167	6e-38
77	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	165	2e-37
78	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	161	4e-36
79	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	157	6e-35
80	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	145	2e-31
81	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	145	2e-31
82	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	135	2e-28
83	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	8e-28
84	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	119	1e-23
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	107	5e-20
86	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	105	2e-19
87	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	92	3e-15
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	82	3e-12
89	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	80	1e-11
90	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	1e-11
91	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	74	7e-10
92	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	2e-04
93	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	56	2e-04
94	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	56	2e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	2e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	2e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	2e-04
98	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	2e-04
99	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	2e-04
100	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
101	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	52	0.002
102	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	0.59
103	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.3
104	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	2.3
105	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	9.2
106	gb|U60105.1| Bos taurus large conductance calcium-activated pota...	40	9.2
107	ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001...	40	9.2
108	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	9.2
109	gb|AF026000.2| Sus scrofa calcium-activated potassium channel al...	40	9.2
110	gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co...	40	9.2
111	ref|NM_174680.2| Bos taurus potassium large conductance calcium-...	40	9.2
112	gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN...	40	9.2
113	gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN...	40	9.2
114	gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN...	40	9.2
115	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	9.2
116	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	9.2
117	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	9.2
118	gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com...	40	9.2
119	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	9.2
120	ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ...	40	9.2
121	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	9.2

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1245 bits (628), Expect = 0.0
 Identities = 665/674 (98%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 733  cagcggtaccgtgaggctgcag-acatgatcaagaagggtaag-atgtgctgcctcttca 790

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 850

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  accag-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 909

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 910  cctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 969

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 1029

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1030 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgt 1089

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 gacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggt 1149

                                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 1209

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1269

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1329

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1330 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1389

                          
Query: 663  caggatgcgatgaa 676
            ||||||||||||||
Sbjct: 1390 caggatgcgatgaa 1403

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1245 bits (628), Expect = 0.0
 Identities = 665/674 (98%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 478  cagcggtaccgtgaggctgcag-acatgatcaagaagggtaag-atgtgctgcctcttca 535

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 595

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  accag-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 654

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  cctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 714

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 774

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 775  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgt 834

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  gacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggt 894

                                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 954

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 1014

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1074

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1134

                          
Query: 663  caggatgcgatgaa 676
            ||||||||||||||
Sbjct: 1135 caggatgcgatgaa 1148

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1078 bits (544), Expect = 0.0
 Identities = 644/674 (95%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 653  cagcggtaccgtgaggctgcag-acatgatcaagaagggtaag-atgtgctgcctcttca 710

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 711  tcaacgatcttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgtcaaca 770

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 771  accag-atggtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgcagctc 829

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 830  ccaggcatgtacaacaaggaggagaacccacgtgtgcccatcgtcgtcactggtaacgat 889

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890  ttctcgacgttgtacgcccctctgatccgtgatggtcgtatggagaagttctactgggct 949

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 950  cccacccgcgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagc 1009

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1010 gacgagtccgtcgtcaagatcgtcgacaccttcccaggacaatccatcgactttttcggt 1069

                                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 482
            |||||||||||||||||||||||||| |||||||||||||||||   ||||||||| |||
Sbjct: 1070 gctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacctctaccggtatc 1129

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 1130 gagaacattggcaagaagctggtgaactcgcgggacggaccagtgacctttgagcagcca 1189

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 aagatgacagtggagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 1249

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 1309

                          
Query: 663  caggatgcgatgaa 676
            ||||||||||||||
Sbjct: 1310 caggatgcgatgaa 1323

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  835 bits (421), Expect = 0.0
 Identities = 613/674 (90%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||| | ||| |||| ||||||||||| |||| ||| ||||||||||||||||
Sbjct: 664  cagcggtaccgcgaggccgcag-acatgatcaagaagggcaag-atgtgctgcctcttca 721

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            ||||||| || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||
Sbjct: 722  tcaacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaaca 781

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 782  accag-atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctc 840

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||||||||||||||| |||||| |||||||||| ||||| 
Sbjct: 841  ccggggatgtacaacaaggaggagaacccccgtgtccccatcatcgtcaccggcaacgac 900

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||||||||| ||||| || || |||||||| |||||||||||||||||||||||||| 
Sbjct: 901  ttctcgacgctgtacgcgcccctcatccgtgacggtcgtatggagaagttctactgggcg 960

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 961  cccacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagc 1020

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 1021 gacgagtctgtcgtcaagatcgtcgacacnttcccaggacagtccatcgacttcttcggt 1080

                                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 482
            ||||||||||||||||||||||||| ||||||||||||||||||    || |||||||| 
Sbjct: 1081 gctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggtgtcgtccaccggaatt 1140

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 1141 gagaacatcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagccc 1200

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            |||||||| || |||||| |||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 1201 aagatgacggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaat 1260

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1261 gtcaagcgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaac 1320

                          
Query: 663  caggatgcgatgaa 676
             ||||||| |||||
Sbjct: 1321 aaggatgccatgaa 1334

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  787 bits (397), Expect = 0.0
 Identities = 607/674 (90%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||| | ||| |||| ||||||||||| |||| ||| ||||||||||||||||
Sbjct: 674  cagcggtaccgcgaggccgcag-acatgatcaagaagggcaag-atgtgctgcctcttca 731

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            ||||||| || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||
Sbjct: 732  tcaacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaaca 791

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| 
Sbjct: 792  accag-atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctt 850

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||||||||||||||| |||||  | |||||||| ||||| 
Sbjct: 851  ccggggatgtacaacaaggaggagaacccccgtgttcccattatngtcaccggcaacgac 910

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            || |||||||| ||||| || || || | ||| ||||||||||||||||| |||||||| 
Sbjct: 911  ttttcgacgctgtacgccccccttattcctgacggtcgtatggagaagttttactgggcg 970

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 971  cccacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagc 1030

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1031 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtccatcgacttcttcggt 1090

                                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatc 482
            |||||||||||||||||||||||||| |||||||||||||||||    || |||||||| 
Sbjct: 1091 gctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgtcgtccaccggaatt 1150

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 1151 gagaacatcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagccc 1210

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            |||||||| || |||||| |||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 1211 aagatgacggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaat 1270

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1271 gtcaagcgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaac 1330

                          
Query: 663  caggatgcgatgaa 676
             ||||||| |||||
Sbjct: 1331 aaggatgccatgaa 1344

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  787 bits (397), Expect = 0.0
 Identities = 454/473 (95%)
 Strand = Plus / Plus

                                                                       
Query: 204 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 263
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 264 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 323
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 324 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 383
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 384 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 443
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                       
Query: 444 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 503
           ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                                                                       
Query: 504 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 563
           ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360

                                                                       
Query: 564 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420

                                                                
Query: 624 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaa 676
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaa 473

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  735 bits (371), Expect = 0.0
 Identities = 402/409 (98%), Gaps = 3/409 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 6475 cagcggtaccgtgaggctgcag-acatgatcaagaagggtaag-atgtgctgcctcttca 6532

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6533 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 6592

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 accag-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 6651

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6652 cctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 6711

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6712 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 6771

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6772 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 6831

                                                             
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 411
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6832 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 6880



 Score =  527 bits (266), Expect = e-146
 Identities = 266/266 (100%)
 Strand = Plus / Plus

                                                                        
Query: 411  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                                        
Query: 471  tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200

                                                                        
Query: 591  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260

                                      
Query: 651  ggtgatgctaaccaggatgcgatgaa 676
            ||||||||||||||||||||||||||
Sbjct: 7261 ggtgatgctaaccaggatgcgatgaa 7286



 Score =  389 bits (196), Expect = e-105
 Identities = 368/424 (86%), Gaps = 1/424 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            ||||||||||||||||||||||| || ||||| || |||||  |||||||||| || |||
Sbjct: 3390 atgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacg 3449

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            |||||||| || ||||||||| ||||||||||||||||||||||||||||| || || ||
Sbjct: 3450 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgcggacgcgcc 3508

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| |
Sbjct: 3509 caccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatcat 3568

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            ||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||||
Sbjct: 3569 cgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgga 3628

                                                                        
Query: 287  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            ||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| 
Sbjct: 3629 gaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccg 3688

                                                                        
Query: 347  gaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 406
             |||||||| |||   |||||| | || || | | | || ||||||||||| || || ||
Sbjct: 3689 caccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagtc 3748

                                                                        
Query: 407  cattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 3749 catcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 3808

                
Query: 467  cggc 470
            ||||
Sbjct: 3809 cggc 3812



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932

                                         
Query: 591  gagcaggacaatgtcaagcgtgtgcagct 619
            |||||||| || |||||||||||||||||
Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  448 bits (226), Expect = e-122
 Identities = 256/266 (96%)
 Strand = Plus / Plus

                                                                       
Query: 411 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 470
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2   gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                                       
Query: 471 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 530
           |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 62  tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121

                                                                       
Query: 531 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181

                                                                       
Query: 591 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241

                                     
Query: 651 ggtgatgctaaccaggatgcgatgaa 676
           ||||||||||||||||||||||||||
Sbjct: 242 ggtgatgctaaccaggatgcgatgaa 267

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  432 bits (218), Expect = e-118
 Identities = 405/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 657  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 714

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 715  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 774

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 775  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 833

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            ||||| ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 834  cctgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 893

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 894  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 953

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 954  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 1013

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 1014 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1073

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1074 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 626  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 683

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 684  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 743

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 744  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 802

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 803  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 862

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 863  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 922

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 923  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 982

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 983  gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1042

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1043 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 621  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 678

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 679  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 738

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 739  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 797

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 798  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 857

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 858  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 917

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 918  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 977

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 978  gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1037

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1038 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 669  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 726

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 727  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 786

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 787  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 845

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 846  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 905

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 906  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 965

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 966  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 1025

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 1026 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1085

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1086 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 620  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 677

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 678  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 737

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 738  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 796

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 797  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 856

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 857  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 916

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 917  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 976

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 977  gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1036

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1037 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 658  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 715

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 716  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 775

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 776  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 834

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 835  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 894

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 895  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 954

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 955  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 1014

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 1015 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1074

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1075 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
           ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 441 cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 498

                                                                       
Query: 63  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
           |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 499 tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 558

                                                                       
Query: 123 accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
           ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 559 accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 617

                                                                       
Query: 183 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
           || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 618 cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 677

                                                                       
Query: 243 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
           ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 678 ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 737

                                                                       
Query: 303 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
           |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 738 cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 797

                                                                       
Query: 363 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
           ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 798 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 857

                                                       
Query: 423 gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
           ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 858 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 918  gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 978  aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 662  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 719

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 720  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 779

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 780  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 838

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 839  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 898

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 899  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 958

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 959  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 1018

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 1019 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1078

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1079 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  424 bits (214), Expect = e-115
 Identities = 404/464 (87%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 656  cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 713

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 714  tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 773

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 774  accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 832

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 833  cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 892

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 893  ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 952

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 953  cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 1012

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            ||||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| 
Sbjct: 1013 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggc 1072

                                                        
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1073 gctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 483  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192

                                                                        
Query: 543  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252

                                                                        
Query: 603  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  394 bits (199), Expect = e-106
 Identities = 497/594 (83%), Gaps = 2/594 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   acatgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcg 85
            |||| |||||| |||| ||| ||||||||||||||||||||||| || ||||| || |||
Sbjct: 651  acattatcaagaagggcaag-atgtgctgcctcttcatcaacgacctggacgccggcgcg 709

                                                                        
Query: 86   ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccct 145
            ||  |||||||||| || ||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 710  gggcggatgggcgggacgacgcagtacacggtgaacaaccag-atggtgaacgccaccct 768

                                                                        
Query: 146  gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 205
            |||||||||||| || || ||||||||||||||| |||| || |||||||||||||||||
Sbjct: 769  gatgaacatcgcggacgcgcccaccaacgtgcagttcccggggatgtacaacaaggagga 828

                                                                        
Query: 206  gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 265
            |||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| || ||
Sbjct: 829  gaacccacgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccct 888

                                                                        
Query: 266  gatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcgg 325
             ||||| || || || |||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 889  catccgggacggccgcatggagaagttctactgggcgcccacccgggaggaccgcatcgg 948

                                                                        
Query: 326  tgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgt 385
             || |||||||| |||||||  |||||||| |||   |||||| | || || | | | ||
Sbjct: 949  cgtgtgcaagggcatcttccgcaccgacaacgtccccgacgaggccgtggtgaggctggt 1008

                                                                        
Query: 386  cgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacga 445
             ||||||||||| || || ||||| ||||| ||||| || ||||| || |||||||||||
Sbjct: 1009 ggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggcgcgggtgtacga 1068

                                                                        
Query: 446  cgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggt 505
            ||| |||||||||||||||||||||   | |||  ||||||||||   |||| |||| ||
Sbjct: 1069 cgacgaggtgcgcaagtgggtcggcgagatcggcgtcgagaacatctccaagcggctcgt 1128

                                                                        
Query: 506  gaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgct 565
             |||||  |||| |||||   ||| ||||| ||||| ||||||||  ||||||||||  |
Sbjct: 1129 caactccagggaggggccgccgacgttcgaccagcccaagatgaccatcgagaagctcat 1188

                                                                  
Query: 566  agagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagct 619
             |||||||| |||||||| |||||||||||||| || || ||||| ||||||||
Sbjct: 1189 ggagtacggccacatgctggtccaggagcaggagaacgtgaagcgcgtgcagct 1242

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  389 bits (196), Expect = e-105
 Identities = 368/424 (86%), Gaps = 1/424 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            ||||||||||||||||||||||| || ||||| || |||||  |||||||||| || |||
Sbjct: 821  atgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacg 880

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            |||||||| || ||||||||| ||||||||||||||||||||||||||||| || || ||
Sbjct: 881  cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgcggacgcgcc 939

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| |
Sbjct: 940  caccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatcat 999

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            ||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||||
Sbjct: 1000 cgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgga 1059

                                                                        
Query: 287  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            ||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| 
Sbjct: 1060 gaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccg 1119

                                                                        
Query: 347  gaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 406
             |||||||| |||   |||||| | || || | | | || ||||||||||| || || ||
Sbjct: 1120 caccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagtc 1179

                                                                        
Query: 407  cattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
            ||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1180 catcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 1239

                
Query: 467  cggc 470
            ||||
Sbjct: 1240 cggc 1243



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363

                                         
Query: 591  gagcaggacaatgtcaagcgtgtgcagct 619
            |||||||| || |||||||||||||||||
Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  383 bits (193), Expect = e-103
 Identities = 356/407 (87%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
              ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 109091 cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 109034

                                                                          
Query: 63     tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
              |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 109033 tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 108974

                                                                          
Query: 123    accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
              ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 108973 accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 108915

                                                                          
Query: 183    cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
              || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 108914 cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 108855

                                                                          
Query: 243    ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
              ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 108854 ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 108795

                                                                          
Query: 303    cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
              |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 108794 cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 108735

                                                             
Query: 363    gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 409
              ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 108734 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 108688



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                          
Query: 94     gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 153
              |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 112621

                                                          
Query: 154    tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 197
              |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112620 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                          
Query: 483    gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
              |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463

                                                                          
Query: 543    aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
              ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403

                                                                          
Query: 603    gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
              ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 282    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 341
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 342    ttcc 345
              ||||
Sbjct: 112459 ttcc 112456



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 417    ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 483    gagaacattggcaagaggctggtgaactc 511
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  383 bits (193), Expect = e-103
 Identities = 356/407 (87%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
             ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 30968 cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 30911

                                                                         
Query: 63    tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
             |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 30910 tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 30851

                                                                         
Query: 123   accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
             ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 30850 accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 30792

                                                                         
Query: 183   cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
             || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 30791 cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 30732

                                                                         
Query: 243   ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
             ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 30731 ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 30672

                                                                         
Query: 303   cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
             |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 30671 cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 30612

                                                            
Query: 363   gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 409
             ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 30611 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 30565



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                         
Query: 94    gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 153
             |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 34498

                                                         
Query: 154   tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 197
             |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34497 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                         
Query: 483   gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
             |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340

                                                                         
Query: 543   aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
             ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280

                                                                         
Query: 603   gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
             ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 282   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 341
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 342   ttcc 345
             ||||
Sbjct: 34336 ttcc 34333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 417   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 483   gagaacattggcaagaggctggtgaactc 511
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  383 bits (193), Expect = e-103
 Identities = 356/407 (87%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
                ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 28304230 cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 28304173

                                                                            
Query: 63       tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
                |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 28304172 tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 28304113

                                                                            
Query: 123      accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
                ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 28304112 accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 28304054

                                                                            
Query: 183      cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
                || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 28304053 cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 28303994

                                                                            
Query: 243      ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
                ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 28303993 ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 28303934

                                                                            
Query: 303      cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
                |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 28303933 cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 28303874

                                                               
Query: 363      gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 409
                ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28303873 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28303827



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 94       gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 153
                |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 28307760

                                                            
Query: 154      tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 197
                |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307759 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                            
Query: 483      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602

                                                                            
Query: 543      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542

                                                                            
Query: 603      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 282      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 341
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 342      ttcc 345
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 417      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 483      gagaacattggcaagaggctggtgaactc 511
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  383 bits (193), Expect = e-103
 Identities = 356/407 (87%), Gaps = 3/407 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
                ||||||||||||| ||| |||| |||| |||||| |||| ||| ||||||||||||||||
Sbjct: 28286679 cagcggtaccgtgaggcggcag-acatcatcaagaaggggaag-atgtgctgcctcttca 28286622

                                                                            
Query: 63       tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
                |||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||
Sbjct: 28286621 tcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaaca 28286562

                                                                            
Query: 123      accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
                ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||||
Sbjct: 28286561 accag-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctc 28286503

                                                                            
Query: 183      cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
                || || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| 
Sbjct: 28286502 cccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgac 28286443

                                                                            
Query: 243      ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
                ||||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 28286442 ttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggct 28286383

                                                                            
Query: 303      cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
                |||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   
Sbjct: 28286382 cccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtcccc 28286323

                                                               
Query: 363      gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 409
                ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28286322 gacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28286276



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 94       gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 153
                |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 28290209

                                                            
Query: 154      tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 197
                |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290208 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                            
Query: 483      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051

                                                                            
Query: 543      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991

                                                                            
Query: 603      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 282      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 341
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 342      ttcc 345
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 417      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 466
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 483      gagaacattggcaagaggctggtgaactc 511
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  357 bits (180), Expect = 3e-95
 Identities = 394/462 (85%), Gaps = 3/462 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
           ||||||||||||| ||| || | |||| |||| | |||| ||| ||||||||||||||||
Sbjct: 315 cagcggtaccgtgaggccgccg-acatcatcaggaaggggaag-atgtgctgcctcttca 372

                                                                       
Query: 63  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 373 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 432

                                                                       
Query: 123 accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
           ||||| ||||||||||||||||| ||||||||||||||   |||||||||||| ||||||
Sbjct: 433 accag-atggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctc 491

                                                                       
Query: 183 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
           || ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| 
Sbjct: 492 cccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgac 551

                                                                       
Query: 243 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
           ||||| || |||||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct: 552 ttctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggct 611

                                                                       
Query: 303 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
           |||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||   
Sbjct: 612 cccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccc 671

                                                                       
Query: 363 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            | |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||
Sbjct: 672 aaggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggt 731

                                                     
Query: 423 gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 464
           || ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 732 gcactgagggcgagggtctacgacgacgaggtgaggaagtgg 773



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 492 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 551
           |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860

                                                                       
Query: 552 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 611
            | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920

                                                                       
Query: 612 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 671
           |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980

             
Query: 672 at 673
           ||
Sbjct: 981 at 982

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  357 bits (180), Expect = 3e-95
 Identities = 394/462 (85%), Gaps = 3/462 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
           ||||||||||||| ||| || | |||| |||| | |||| ||| ||||||||||||||||
Sbjct: 509 cagcggtaccgtgaggccgccg-acatcatcaggaaggggaag-atgtgctgcctcttca 566

                                                                       
Query: 63  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 567 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 626

                                                                       
Query: 123 accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
           ||||| ||||||||||||||||| ||||||||||||||   |||||||||||| ||||||
Sbjct: 627 accag-atggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctc 685

                                                                       
Query: 183 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
           || ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| 
Sbjct: 686 cccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgac 745

                                                                       
Query: 243 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
           ||||| || |||||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct: 746 ttctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggct 805

                                                                       
Query: 303 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
           |||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||   
Sbjct: 806 cccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccc 865

                                                                       
Query: 363 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            | |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||
Sbjct: 866 aaggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggt 925

                                                     
Query: 423 gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 464
           || ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 926 gcactgagggcgagggtctacgacgacgaggtgaggaagtgg 967



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                        
Query: 492  ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 551
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 995  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054

                                                                        
Query: 552  gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 611
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114

                                                                        
Query: 612  gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 671
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174

              
Query: 672  at 673
            ||
Sbjct: 1175 at 1176

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  349 bits (176), Expect = 7e-93
 Identities = 393/462 (85%), Gaps = 3/462 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
            ||||||||||||| ||| || | |||| |||| | |||| ||| ||||||||||||||||
Sbjct: 616  cagcggtaccgtgaggccgccg-acatcatcaggaaggggaag-atgtgctgcctcttca 673

                                                                        
Query: 63   tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
            |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 674  tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 733

                                                                        
Query: 123  accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
            ||||| ||||||||||||||||| ||||||||||||||   |||||||||||| ||||||
Sbjct: 734  accag-atggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctc 792

                                                                        
Query: 183  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
            || ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| 
Sbjct: 793  cccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgac 852

                                                                        
Query: 243  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
            ||||| || |||||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct: 853  ttctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggct 912

                                                                        
Query: 303  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
            |||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||   
Sbjct: 913  cccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccc 972

                                                                        
Query: 363  gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
             | |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||
Sbjct: 973  aaggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggt 1032

                                                      
Query: 423  gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 464
            || ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 1033 gcactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 495  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 554
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164

                                                                        
Query: 555  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 614
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224

                                                                       
Query: 615  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 673
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||||
Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgat 1283

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  349 bits (176), Expect = 7e-93
 Identities = 393/462 (85%), Gaps = 3/462 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cagcggtaccgtgnggctgcagnacatgatcaagnagggtaagnatgtgctgcctcttca 62
           ||||||||||||| ||| || | |||| |||| | |||| ||| ||||||||||||||||
Sbjct: 479 cagcggtaccgtgaggccgccg-acatcatcaggaaggggaag-atgtgctgcctcttca 536

                                                                       
Query: 63  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 122
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 537 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 596

                                                                       
Query: 123 accagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 182
           ||||| ||||||||||||||||| ||||||||||||||   |||||||||||| ||||||
Sbjct: 597 accag-atggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctc 655

                                                                       
Query: 183 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 242
           || ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| 
Sbjct: 656 cccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgac 715

                                                                       
Query: 243 ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 302
           ||||| || |||||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct: 716 ttctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggct 775

                                                                       
Query: 303 cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagt 362
           |||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||   
Sbjct: 776 cccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccc 835

                                                                       
Query: 363 gacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggt 422
            | |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||
Sbjct: 836 aaggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggt 895

                                                     
Query: 423 gctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 464
           || ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 896 gcactgagggcgagggtctacgacgacgaggtgaggaagtgg 937



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 495  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 554
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 968  aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027

                                                                        
Query: 555  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 614
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087

                                                                       
Query: 615  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 673
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||||
Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgat 1146

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 132 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 191
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 192 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 251
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 252 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 311
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 312 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 371
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 372 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 431
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                              
Query: 432 gctcgggtgtacgacgatgaggtgcgcaagtgggt 466
           || || || |||||||| |||||||||||||||||
Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                       
Query: 483 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 542
           |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411

                                                                       
Query: 543 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 602
           ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471

                                                                       
Query: 603 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 662
           ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  303 bits (153), Expect = 4e-79
 Identities = 358/424 (84%), Gaps = 2/424 (0%)
 Strand = Plus / Plus

                                                                       
Query: 31  atcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtag 90
           |||||| |||| ||| |||| ||||||||||||||||||  | ||||| || |||||| |
Sbjct: 262 atcaagaagggcaag-atgtcctgcctcttcatcaacgacttggacgccggcgcgggtcg 320

                                                                       
Query: 91  gatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatga 150
            |||||||| ||||| |||||||| || ||||||||| ||||| ||||||||||||||||
Sbjct: 321 catgggcggcaccacccagtacacggtgaacaaccag-atggtcaacgccaccctgatga 379

                                                                       
Query: 151 acatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacc 210
           ||||||||||   ||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 380 acatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacc 439

                                                                       
Query: 211 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 270
           |||| ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||
Sbjct: 440 cccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatcc 499

                                                                       
Query: 271 gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 330
           | || || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||
Sbjct: 500 gcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtct 559

                                                                       
Query: 331 gcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgaca 390
           ||||||| |||||||  ||||||   |||   || |||   |||||| || | |||||||
Sbjct: 560 gcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgaca 619

                                                                       
Query: 391 ccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatg 450
           ||||||| || || ||||| ||||| ||||| || |||||||| ||||| |||||||| |
Sbjct: 620 ccttccctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtctacgacgacg 679

               
Query: 451 aggt 454
           ||||
Sbjct: 680 aggt 683



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                       
Query: 531 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
           ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819

                                                
Query: 591 gagcaggacaatgtcaagcgtgtgcagcttgctgaca 627
           |||||||| || |||||||||||||||||||||||||
Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgaca 856

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  295 bits (149), Expect = 1e-76
 Identities = 357/424 (84%), Gaps = 2/424 (0%)
 Strand = Plus / Plus

                                                                        
Query: 31   atcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtag 90
            |||||| |||| ||| |||| ||||||||||||||||||  | ||||| || |||||| |
Sbjct: 657  atcaagaagggcaag-atgtcctgcctcttcatcaacgacttggacgccggcgcgggtcg 715

                                                                        
Query: 91   gatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatga 150
             |||||||| ||||| |||||||| || ||||||||| ||||| ||||||||||||||||
Sbjct: 716  catgggcggcaccacccagtacacggtgaacaaccag-atggtcaacgccaccctgatga 774

                                                                        
Query: 151  acatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacc 210
            ||||||||||   ||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 775  acatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaacc 834

                                                                        
Query: 211  cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 270
            |||| ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||
Sbjct: 835  cccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatcc 894

                                                                        
Query: 271  gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 330
            | || || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||
Sbjct: 895  gcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtct 954

                                                                        
Query: 331  gcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgaca 390
            ||||||| |||||||  ||||||   |||   || |||   |||||| || | |||||||
Sbjct: 955  gcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggtcgaca 1014

                                                                        
Query: 391  ccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatg 450
            ||||||| || || ||||| || || ||||| || |||||||| ||||| |||||||| |
Sbjct: 1015 ccttccctggccagtccatcgatttcttcggcgcgctgcgtgcccgggtctacgacgacg 1074

                
Query: 451  aggt 454
            ||||
Sbjct: 1075 aggt 1078



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                 
Query: 591  gagcaggacaatgtcaagcgtgtgcagcttgctgaca 627
            |||||||| || |||||||||||||||||||||||||
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgaca 1251

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 821  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 879

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 880  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 938

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 939  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 998

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 999  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 1058

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1059 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1118

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1119 ctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 821  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 879

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 880  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 938

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 939  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 998

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 999  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 1058

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1059 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1118

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1119 ctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 850  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 908

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 909  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 967

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 968  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 1027

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 1028 cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 1087

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1088 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1147

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1148 ctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 732  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 790

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 791  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 849

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 850  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 909

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 910  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 969

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 970  ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1029

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1030 ctgcaagggtatcttc 1045

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Minus

                                                                         
Query: 29    tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
             |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 14467 tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 14409

                                                                         
Query: 89    aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
              | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 14408 cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 14350

                                                                         
Query: 149   gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
             |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 14349 gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 14290

                                                                         
Query: 209   cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
             | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 14289 cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 14230

                                                                         
Query: 269   ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
             ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 14229 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 14170

                             
Query: 329   ctgcaagggtatcttc 344
             ||||||||||||||||
Sbjct: 14169 ctgcaagggtatcttc 14154

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 735  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 793

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 794  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 852

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 853  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 912

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 913  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 972

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 973  ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1032

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1033 ctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 732  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 790

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 791  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 849

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 850  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 909

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 910  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 969

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 970  ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1029

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1030 ctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 735  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 793

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 794  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 852

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 853  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 912

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 913  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 972

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 973  ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1032

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1033 ctgcaagggtatcttc 1048

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  280 bits (141), Expect = 6e-72
 Identities = 274/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2816 tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 2874

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 2875 cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 2933

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 2934 gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 2993

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 2994 cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 3053

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 3054 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 3113

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 3114 ctgcaagggtatcttc 3129

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  272 bits (137), Expect = 1e-69
 Identities = 273/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
           |||||||| |||| ||| ||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 647 tgatcaagaagggaaag-atgtgttgtctcctcatcaacgatcttgacgctggtgcgggt 705

                                                                       
Query: 89  aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
            | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 706 cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 764

                                                                       
Query: 149 gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
           |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 765 gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 824

                                                                       
Query: 209 cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
           | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 825 cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 884

                                                                       
Query: 269 ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
           ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 885 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 944

                           
Query: 329 ctgcaagggtatcttc 344
           ||||||||||||||||
Sbjct: 945 ctgcaagggtatcttc 960

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  272 bits (137), Expect = 1e-69
 Identities = 273/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 724  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 782

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 783  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 841

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 842  gaacattgctgataacccaaccaacgtccagcttccaggaatgtacaacaaggaagagaa 901

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 902  cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 961

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 962  ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1021

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1022 ctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  272 bits (137), Expect = 1e-69
 Identities = 273/316 (86%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 850  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 908

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||| ||| ||||| ||||| || || ||
Sbjct: 909  cgtatgggtggtactactcagtacactgtcaacaatcag-atggttaacgcaacactcat 967

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 968  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 1027

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| || || ||||||||||| ||
Sbjct: 1028 cgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcctctcat 1087

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgt 328
            ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1088 ccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatcggtgt 1147

                            
Query: 329  ctgcaagggtatcttc 344
            ||||||||||||||||
Sbjct: 1148 ctgcaagggtatcttc 1163

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  266 bits (134), Expect = 9e-68
 Identities = 336/402 (83%), Gaps = 1/402 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 218 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 277

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 278 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 336

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||||||
Sbjct: 337 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgt 396

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 397 cgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgcatgga 456

                                                                       
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| 
Sbjct: 457 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttccg 516

                                                                       
Query: 347 gaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 406
            ||||||   |||   ||||||   |||||| || |||||||| ||||||| || || ||
Sbjct: 517 caccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtc 576

                                                     
Query: 407 cattgactttttcggtgctctgcgtgctcgggtgtacgacga 448
           ||| ||||| ||||| || || || || ||||||||||||||
Sbjct: 577 catcgacttcttcggcgccctccgcgcccgggtgtacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  266 bits (134), Expect = 9e-68
 Identities = 336/402 (83%), Gaps = 1/402 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 226 atgtcctgcctgttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacc 285

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 286 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 344

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| ||||||||||||||
Sbjct: 345 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgt 404

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 405 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 464

                                                                       
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| 
Sbjct: 465 caagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttccg 524

                                                                       
Query: 347 gaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 406
            ||||||   |||   ||||||   |||||| || |||||||| ||||||| || || ||
Sbjct: 525 caccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtc 584

                                                     
Query: 407 cattgactttttcggtgctctgcgtgctcgggtgtacgacga 448
           ||| ||||| ||||| || || || || ||||||||||||||
Sbjct: 585 catcgacttcttcggcgccctccgcgcccgggtgtacgacga 626

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  264 bits (133), Expect = 3e-67
 Identities = 270/315 (85%), Gaps = 2/315 (0%)
 Strand = Plus / Plus

                                                                       
Query: 31  atcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtag 90
           |||||| |||| ||| |||||||||||||||||||||||  | ||||| || |||||| |
Sbjct: 657 atcaagaagggcaag-atgtgctgcctcttcatcaacgacttggacgccggcgcgggtcg 715

                                                                       
Query: 91  gatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatga 150
            |||||||| ||||| |||||||| || ||||||||| ||||| ||||||||||||||||
Sbjct: 716 catgggcggcaccacccagtacacggtgaacaaccag-atggtcaacgccaccctgatga 774

                                                                       
Query: 151 acatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacc 210
           ||||||||||   ||||||||||||||||||||| || ||||||||||||||||| ||  
Sbjct: 775 acatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggaggacaann 834

                                                                       
Query: 211 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 270
              | ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||
Sbjct: 835 nnngcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatcc 894

                                                                       
Query: 271 gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 330
           | || || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||
Sbjct: 895 gcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtct 954

                          
Query: 331 gcaagggtatcttcc 345
           ||||||| |||||||
Sbjct: 955 gcaagggcatcttcc 969



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                 
Query: 591  gagcaggacaatgtcaagcgtgtgcagcttgctgaca 627
            |||||||| || |||||||||||||||||||||||||
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgaca 1251

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 232 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 291

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 292 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 350

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 351 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 410

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 411 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 470

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 471 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 238 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 297

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 298 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 356

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 357 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 416

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 417 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 476

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 477 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  260 bits (131), Expect = 5e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 236 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 295

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 296 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 354

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 355 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 414

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || |||||
Sbjct: 415 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgga 474

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 475 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 236 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 295

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 296 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 354

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 355 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 414

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 415 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 474

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 475 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 232 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 291

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 292 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 350

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 351 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 410

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 411 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 470

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 471 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 232 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 291

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 292 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 350

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 351 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 410

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 411 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 470

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 471 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 234 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 293

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 294 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 352

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 353 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 412

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 413 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 472

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 473 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  252 bits (127), Expect = 1e-63
 Identities = 257/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           |||| |||||| |||||||||||||| ||||| || || ||  | |||||||| ||||| 
Sbjct: 238 atgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacc 297

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   |||
Sbjct: 298 cagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaaccc 356

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
           |||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| |
Sbjct: 357 caccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcat 416

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           ||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || |||||
Sbjct: 417 cgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgga 476

                                                                      
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 345
            |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 477 caagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  252 bits (127), Expect = 1e-63
 Identities = 254/295 (86%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
           ||||| || ||||| || |||||||| ||| | ||||| |||||||| || |||||||||
Sbjct: 560 ttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtc 619

                                                                       
Query: 119 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
           ||||||||| ||||| ||||| ||||| |||||||||||||||  |||||||||||| ||
Sbjct: 620 aacaaccag-atggttaacgctaccctcatgaacatcgccgataaccccaccaacgtcca 678

                                                                       
Query: 179 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
           |||||| || |||||||||||||| |||||||||||||| |||||| ||||||| |||||
Sbjct: 679 gctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggtaa 738

                                                                       
Query: 239 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
           ||||||||| || || || |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 739 cgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttactg 798

                                                                  
Query: 299 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 353
           ||| || ||  | ||||||||||||||||| ||||| ||||| |||  |||||||
Sbjct: 799 ggcaccaactagggacgaccgtatcggtgtttgcaaaggtattttcaggaccgac 853



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 441
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

               
Query: 442 acga 445
           ||||
Sbjct: 942 acga 945

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  244 bits (123), Expect = 3e-61
 Identities = 256/299 (85%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 114
           ||||||||| |||||||| || |||||||| ||| | ||||| |||||||| || |||||
Sbjct: 555 cctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacac 614

                                                                       
Query: 115 cgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacg 174
           ||||||||||||| ||||| || || ||||| |||||||||||||||  |||||||||||
Sbjct: 615 cgtcaacaaccag-atggttaatgctaccctcatgaacatcgccgataaccccaccaacg 673

                                                                       
Query: 175 tgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccg 234
           | |||||||| || |||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 674 tccagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactg 733

                                                                       
Query: 235 gtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttct 294
           ||||||||||||| || || || |||||||| |||||||| |||||||||||||| || |
Sbjct: 734 gtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaatttt 793

                                                                      
Query: 295 actgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 353
           ||||||| || ||  | ||||||||| ||||||| ||||| ||||| |||  |||||||
Sbjct: 794 actgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttcaggaccgac 852



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 441
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

               
Query: 442 acga 445
           ||||
Sbjct: 941 acga 944

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  244 bits (123), Expect = 3e-61
 Identities = 282/333 (84%), Gaps = 2/333 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   acatgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcg 85
            |||| |||||| |||||||  ||||||||||| |||||||||||||| |||||||| || 
Sbjct: 713  acattatcaagaagggtaa-aatgtgctgcctgttcatcaacgatctcgacgctggagct 771

                                                                        
Query: 86   ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccct 145
            ||| | ||||| ||||| || || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 772  ggtcgtatgggtggaacaactcaatacactgttaacaaccag-atggtgaatgccaccct 830

                                                                        
Query: 146  gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 205
             |||||||| || ||   ||| || || || ||||||||||| |||||||||||||| ||
Sbjct: 831  catgaacattgctgacaacccaacaaatgtccagctccctggtatgtacaacaaggaaga 890

                                                                        
Query: 206  gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 265
            |||||| |||||||| ||| | ||||| |||||||| ||||||||  | |||||||||||
Sbjct: 891  gaaccctcgtgtgcctatcattgtcactggtaacgacttctcgacattgtacgctcctct 950

                                                                        
Query: 266  gatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcgg 325
             |||||||||||||||||||| || |||||||||||||| ||| | || |||||||| ||
Sbjct: 951  tatccgtgatggtcgtatggaaaaattctactgggctcctaccagggaagaccgtattgg 1010

                                             
Query: 326  tgtctgcaagggtatcttccagaccgacaatgt 358
            ||||||||||||||| |||  ||| ||||||||
Sbjct: 1011 tgtctgcaagggtattttcaggactgacaatgt 1043



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 621  gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 670
            |||||||  ||||||||  |||| || || ||||||||||||||||||||
Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  242 bits (122), Expect = 1e-60
 Identities = 306/366 (83%), Gaps = 1/366 (0%)
 Strand = Plus / Plus

                                                                        
Query: 59   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
            |||||||||||||| ||||| ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 800  ttcatcaacgatctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtg 859

                                                                        
Query: 119  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
            ||||||||| ||||| ||||||||||| |||||||| || ||   ||||||||| || ||
Sbjct: 860  aacaaccag-atggttaacgccaccctcatgaacattgctgacaaccccaccaatgtcca 918

                                                                        
Query: 179  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
             |||||||| |||||||||||| | |||||| ||||||| |||||  ||||||| |||||
Sbjct: 919  actccctggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaa 978

                                                                        
Query: 239  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
            ||| ||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 979  cgacttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1038

                                                                        
Query: 299  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 358
            ||||||||||||||| ||||||||||||||   ||  |||||||||  ||||||||||||
Sbjct: 1039 ggctcccacccgtgaggaccgtatcggtgttgccaccggtatcttcaggaccgacaatgt 1098

                                                                        
Query: 359  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 418
               ||| ||    || |||||| |||||||||||||||| || ||||| ||||| || ||
Sbjct: 1099 tcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaatctattgatttctt 1158

                  
Query: 419  cggtgc 424
            ||||||
Sbjct: 1159 cggtgc 1164

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  240 bits (121), Expect = 5e-60
 Identities = 265/312 (84%), Gaps = 1/312 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            ||||| |||||||| ||||||||||| |||||||| || ||| | ||||| |||||||| 
Sbjct: 733  atgtgttgcctctttatcaacgatctcgacgctggagccggtcgtatgggaggaaccaca 792

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            || ||||| || ||||||||  |||||||||||||| || ||||||||||| |||  |||
Sbjct: 793  caatacacagtgaacaacca-aatggtgaacgccacactcatgaacatcgctgataaccc 851

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            ||||||||| |||||||| || |||||||||||||| |||||||| ||||| || ||| |
Sbjct: 852  caccaacgttcagctccccggtatgtacaacaaggaagagaaccctcgtgttccgatcat 911

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
             |||||||||||||||||||||||||| ||||| || || |||||||| |||||||||||
Sbjct: 912  tgtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatgga 971

                                                                        
Query: 287  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            |||||| |||||||| |||||| | || ||  | |||||||| ||||  ||||| |||  
Sbjct: 972  gaagttttactgggcacccaccagggaagataggatcggtgtttgcacaggtattttcag 1031

                        
Query: 347  gaccgacaatgt 358
            ||||||||||||
Sbjct: 1032 gaccgacaatgt 1043



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 387  gacaccttcccaggacaatccattgactttttcggtgctctg 428
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  228 bits (115), Expect = 2e-56
 Identities = 238/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 56   ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 115
            |||||||||||||||||||| || || || ||| || | || |||||||| || ||||| 
Sbjct: 758  ctcttcatcaacgatcttgatgcaggagctggtcggcttggtggaaccacccaatacact 817

                                                                        
Query: 116  gtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgt 175
            |||||||||||  |||||||| |||||||| |||||||| || |||  ||| || |||||
Sbjct: 818  gtcaacaacca-aatggtgaatgccaccctcatgaacattgctgataacccgacaaacgt 876

                                                                        
Query: 176  gcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 235
             ||||| || || ||||||||||||||||||||||||||||| || ||| | ||||||||
Sbjct: 877  ccagcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtcaccgg 936

                                                                        
Query: 236  taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttcta 295
            |||||||||||| ||  | ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 937  taacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaagttcta 996

                                                  
Query: 296  ctgggctcccacccgtgacgaccgtatcggtgtctgca 333
            ||||||||||||||| || || ||||| || |||||||
Sbjct: 997  ctgggctcccacccgcgaagatcgtattggagtctgca 1034



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                        
Query: 531  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 590
            ||||||||||| ||||||||  |||| ||||| || ||||||||  ||||||| ||||| 
Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291

                                                                        
Query: 591  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 650
            ||||| || ||||| ||| | || ||  | ||||| |  ||| ||||| |||| ||||| 
Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351

                        
Query: 651  ggtgatgctaac 662
            ||||||||||||
Sbjct: 1352 ggtgatgctaac 1363



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 387  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 446
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 447  gatgaggtgcgcaagtgg 464
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  198 bits (100), Expect = 2e-47
 Identities = 232/274 (84%), Gaps = 2/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 31  atcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtag 90
           |||||| |||||||  ||||||||| | ||||||||||||||||| |||||||| |||||
Sbjct: 148 atcaagaagggtaa-aatgtgctgcttgttcatcaacgatcttgatgctggtgcaggtag 206

                                                                       
Query: 91  gatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatga 150
            ||||| ||||| || || ||||| |||||||| ||| ||||| || || || || ||||
Sbjct: 207 aatgggaggaactacacaatacacagtcaacaatcag-atggttaatgctacactcatga 265

                                                                       
Query: 151 acatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacc 210
           |||| || |||  ||| ||||| || || |||||||| |||||| |||||||||||||||
Sbjct: 266 acattgctgataacccaaccaatgtccaactccctggaatgtacgacaaggaggagaacc 325

                                                                       
Query: 211 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 270
           |||||||||||||| ||||||| || |||||||||||  | || || ||||| || ||||
Sbjct: 326 cccgtgtgcccatcatcgtcacaggaaacgatttctcagcactatatgctccccttatcc 385

                                             
Query: 271 gtgatggtcgtatggagaagttctactgggctcc 304
           | |||||||||||||| |||||||||||||||||
Sbjct: 386 gcgatggtcgtatggaaaagttctactgggctcc 419

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  190 bits (96), Expect = 4e-45
 Identities = 231/275 (84%), Gaps = 1/275 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
           |||||||||||||| || || || || ||| | ||||| |||||||| || ||||| |||
Sbjct: 183 ttcatcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtc 242

                                                                       
Query: 119 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
           ||||||||  |||||||| ||||| || |||||||| || |||  ||||||||| || ||
Sbjct: 243 aacaacca-aatggtgaatgccacactcatgaacattgctgataaccccaccaatgtcca 301

                                                                       
Query: 179 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
            |||||||| |||||||||||||| || ||  | |||||||||||| | |||||||||||
Sbjct: 302 actccctggtatgtacaacaaggaagacaatgctcgtgtgcccatcattgtcaccggtaa 361

                                                                       
Query: 239 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
            |||||||| || || || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 362 tgatttctcaacactttatgctcctctcatccgtgatggtcgtatggagaagttctactg 421

                                              
Query: 299 ggctcccacccgtgacgaccgtatcggtgtctgca 333
           |||||| ||  | || || ||||| ||||||||||
Sbjct: 422 ggctcctactagagaagatcgtattggtgtctgca 456



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 375 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 434
           |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                           
Query: 435 cgggtgtacgacgatgaggtgcgcaagtgggt 466
            | |||||||| ||||| ||| | ||||||||
Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  190 bits (96), Expect = 4e-45
 Identities = 256/305 (83%), Gaps = 6/305 (1%)
 Strand = Plus / Plus

                                                                        
Query: 29   tgatcaagnagggtaagnatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 88
            |||||||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 716  tgatcaagaagggaaag-atgtgttgtctcttcatcaacgatcttgacgctggtgcgggt 774

                                                                        
Query: 89   aggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgat 148
             | ||||| || || || |||||||| |||||||||||| ||||| ||||| || || ||
Sbjct: 775  cgtatgggtggtactactcagtacactgtcaacaaccag-atggttaacgcaacactcat 833

                                                                        
Query: 149  gaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 208
            |||||| || |||  ||| |||||||| |||||||| || |||||||||||||| |||||
Sbjct: 834  gaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaagagaa 893

                                                                        
Query: 209  cccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgat 268
            | | ||||| |||||| |   ||| |||||||||||||| ||  | |||| |||||| ||
Sbjct: 894  cgcacgtgtccccatcatttgcactggtaacgatttctccaccttatacggtcctctcat 953

                                                                        
Query: 269  ccgtgatggtcgtatggagaagttct--actgggctcccacccgtgacgaccgtatcggt 326
            || |||||| ||||||||||||||||  |||||   || |||||||| ||||||||||||
Sbjct: 954  ccttgatggacgtatggagaagttcttgactgg--cccgacccgtgaagaccgtatcggt 1011

                 
Query: 327  gtctg 331
            |||||
Sbjct: 1012 gtctg 1016

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  188 bits (95), Expect = 2e-44
 Identities = 216/255 (84%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                        
Query: 98   ggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgc 157
            |||||||| || ||||| || ||||||||| |||||||| ||||| || |||||||| ||
Sbjct: 789  ggaaccacccaatacactgtgaacaaccag-atggtgaatgccactctcatgaacattgc 847

                                                                        
Query: 158  cgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgt 217
             |||  |||||| || |||||||| ||||| |||||||||||||| || ||| |||||||
Sbjct: 848  tgataaccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgt 907

                                                                        
Query: 218  gcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatgg 277
            ||||||| | ||||| |||||||||||||| || || || |||||||| |||||||||||
Sbjct: 908  gcccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatgg 967

                                                                        
Query: 278  tcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaaggg 337
            |||||||||||||||||||||||| || ||  | || ||||| || ||||| ||||||||
Sbjct: 968  tcgtatggagaagttctactgggcaccaacaagggaagaccgcattggtgtttgcaaggg 1027

                           
Query: 338  tatcttccagaccga 352
             || |||| ||||||
Sbjct: 1028 aattttccggaccga 1042

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  184 bits (93), Expect = 3e-43
 Identities = 229/273 (83%), Gaps = 1/273 (0%)
 Strand = Plus / Plus

                                                                        
Query: 59   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
            |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 2542 ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 2601

                                                                        
Query: 119  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
            ||||||||| ||||| |||||||| || |||||||| || ||   ||| ||||| || ||
Sbjct: 2602 aacaaccag-atggttaacgccacactcatgaacattgctgacaacccaaccaatgtcca 2660

                                                                        
Query: 179  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 2661 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 2720

                                                                        
Query: 239  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 2721 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 2780

                                             
Query: 299  ggctcccacccgtgacgaccgtatcggtgtctg 331
            ||||||||||||||| |||||||| ||||||||
Sbjct: 2781 ggctcccacccgtgaggaccgtattggtgtctg 2813

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  184 bits (93), Expect = 3e-43
 Identities = 331/409 (80%), Gaps = 1/409 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           || ||||| |||||||||||| |||||||| ||||| || ||||||||||| |||  |||
Sbjct: 115 caatacactgtcaacaaccag-atggtgaatgccactctcatgaacatcgctgataaccc 173

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            || || || |||||||| || |||||||||||| | |||||| || | || |||||  |
Sbjct: 174 gacaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattat 233

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            ||||| |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||
Sbjct: 234 tgtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatgga 293

                                                                       
Query: 287 gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
           ||||||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  
Sbjct: 294 gaagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcag 353

                                                                       
Query: 347 gaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatc 406
           ||||||||| ||   ||| ||  |||| || ||||| ||||| |||||||| ||||||||
Sbjct: 354 gaccgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatc 413

                                                            
Query: 407 cattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 455
            |||||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 414 tattgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  180 bits (91), Expect = 4e-42
 Identities = 206/243 (84%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
           ||||||||||||||||| || || || ||| |  | || |||||||| || ||||| || 
Sbjct: 754 ttcatcaacgatcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtg 813

                                                                       
Query: 119 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
           ||||||||| |||||||| ||||| || |||||||| || |||  ||| || || |||||
Sbjct: 814 aacaaccag-atggtgaatgccactctcatgaacattgctgataaccctacaaatgtgca 872

                                                                       
Query: 179 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
           ||| ||||| |||||||||||||| |||||| |||||||||||||| | |||||||||||
Sbjct: 873 gcttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaa 932

                                                                       
Query: 239 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
            |||||||| ||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 933 tgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaagttctactg 992

              
Query: 299 ggc 301
           |||
Sbjct: 993 ggc 995

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  176 bits (89), Expect = 6e-41
 Identities = 228/273 (83%), Gaps = 1/273 (0%)
 Strand = Plus / Plus

                                                                        
Query: 59   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
            |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 914  ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 973

                                                                        
Query: 119  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
            ||||||||| ||||| |||||||| ||  ||||||| || ||   ||| ||||| || ||
Sbjct: 974  aacaaccag-atggttaacgccacactcctgaacattgctgacaacccaaccaatgtcca 1032

                                                                        
Query: 179  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 1033 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 1092

                                                                        
Query: 239  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1093 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1152

                                             
Query: 299  ggctcccacccgtgacgaccgtatcggtgtctg 331
            ||||||||||||||| |||||||| ||||||||
Sbjct: 1153 ggctcccacccgtgaggaccgtattggtgtctg 1185



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 382  tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 441
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 442  acgacgatga 451
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  168 bits (85), Expect = 2e-38
 Identities = 248/301 (82%), Gaps = 1/301 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            ||||||| |||||||||||||||||| ||||||||||| ||  | ||||||     ||| 
Sbjct: 1562 atgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcacc 1621

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            |||||||| |||||||||||| ||||| ||||| ||||| ||||||||||| |||  |||
Sbjct: 1622 cagtacactgtcaacaaccag-atggtcaacgctaccctcatgaacatcgctgataaccc 1680

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
             |||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| ||
Sbjct: 1681 taccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgt 1740

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            |  ||| |||||||||||||| || || ||||| || || |||||||| || || |||||
Sbjct: 1741 ctgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatgga 1800

                                                                        
Query: 287  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcca 346
            ||||| |||||||   ||||||||||| ||||| ||||| ||||||| ||| ||||||||
Sbjct: 1801 gaagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttcca 1860

             
Query: 347  g 347
            |
Sbjct: 1861 g 1861



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 591  gagcaggacaatgtcaagcgtgtgcagct 619
            |||||||| ||||||||||| ||||||||
Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  168 bits (85), Expect = 2e-38
 Identities = 209/249 (83%), Gaps = 1/249 (0%)
 Strand = Plus / Plus

                                                                       
Query: 111 acaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccacc 170
           |||| |||||||||||| ||||| ||||||||||| |||||||| || ||   ||| |||
Sbjct: 1   acactgtcaacaaccag-atggttaacgccaccctcatgaacattgctgacaacccaacc 59

                                                                       
Query: 171 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 230
           || || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| 
Sbjct: 60  aatgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtt 119

                                                                       
Query: 231 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 290
           || |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| 
Sbjct: 120 actggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaa 179

                                                                       
Query: 291 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 350
           ||||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| 
Sbjct: 180 ttctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggact 239

                    
Query: 351 gacaatgtc 359
           |||||||||
Sbjct: 240 gacaatgtc 248

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  167 bits (84), Expect = 6e-38
 Identities = 238/288 (82%), Gaps = 1/288 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            ||||||||||| || ||||||||||| || || || || ||| | ||||| ||||| || 
Sbjct: 733  atgtgctgcctgtttatcaacgatctcgatgccggagctggtcgtatgggtggaacaact 792

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            || ||||| || ||||| ||| |||||||| |||||||| |||||||| || ||   |||
Sbjct: 793  caatacactgttaacaatcag-atggtgaatgccaccctcatgaacatagctgacaaccc 851

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
             || || || ||||| |||||||||||||||||||| |||||||| ||||| |||||| |
Sbjct: 852  aacaaatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcat 911

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
             ||||| |||||||| ||||| ||  | || || ||||| ||||||||||| ||||||||
Sbjct: 912  tgtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatgga 971

                                                            
Query: 287  gaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 334
            ||| ||||||||||| |||||| | || |||||||| |||||||||||
Sbjct: 972  gaaattctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 68/84 (80%)
 Strand = Plus / Plus

                                                                        
Query: 578  catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 637
            |||||| |||||||||||||| || |||||| | || ||  | |||||||  ||||||  
Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322

                                    
Query: 638  ccaggcagctctgggtgatgctaa 661
            | |||| ||||| |||||||||||
Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  165 bits (83), Expect = 2e-37
 Identities = 324/403 (80%), Gaps = 1/403 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 112
            |||||||||||||||||||| || || || || ||||| ||||| ||||| || || |||
Sbjct: 705  tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764

                                                                        
Query: 113  accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 172
            || |||||||||||| |||||||| ||||| || |||||||| || |||  ||| || ||
Sbjct: 765  actgtcaacaaccag-atggtgaatgccactctcatgaacattgctgataacccgacaaa 823

                                                                        
Query: 173  cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 232
            ||| |||||||| || |||||||||||| | |||||| || | || |||||  | |||||
Sbjct: 824  cgtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcac 883

                                                                        
Query: 233  cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 292
             |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||||||
Sbjct: 884  tggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagtt 943

                                                                        
Query: 293  ctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccga 352
            ||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  ||||||
Sbjct: 944  ctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggaccga 1003

                                                                        
Query: 353  caatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattga 412
            ||| ||   ||| ||  | ||  | ||||| ||||| |||||||| |||||||| |||||
Sbjct: 1004 caacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctattga 1063

                                                       
Query: 413  ctttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 455
            ||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 1064 cttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  161 bits (81), Expect = 4e-36
 Identities = 238/289 (82%), Gaps = 1/289 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
           |||||||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| 
Sbjct: 645 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 704

                                                                       
Query: 119 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 178
           ||||||||| ||||||||||||||||||||||||||||||||   ||| |||||||| ||
Sbjct: 705 aacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacccgaccaacgtcca 763

                                                                       
Query: 179 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 238
           ||| || ||  ||||||| || ||||||| ||| || |||||||| ||   ||| || ||
Sbjct: 764 gctgcccggtgtgtacaagaacgaggagatccctcgcgtgcccattgtgtgcacgggcaa 823

                                                                       
Query: 239 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 298
           ||| ||||| || || ||||| || |||||||| ||||| || |||||||||| ||||||
Sbjct: 824 cgacttctccaccctgtacgcgcccctgatccgcgatggccgcatggagaagtactactg 883

                                                            
Query: 299 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 347
           |   |||||||| || ||||| ||||| || |||| ||| |||||||||
Sbjct: 884 gaaccccacccgcgaggaccgcatcggcgtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 387  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 446
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 447  ga 448
            ||
Sbjct: 1032 ga 1033

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  157 bits (79), Expect = 6e-35
 Identities = 212/255 (83%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           ||||| || ||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 710 atgtgttgtctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 769

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           || |||||||||||||||||| |||||||| |||||||| |||||||| || ||   |||
Sbjct: 770 caatacaccgtcaacaaccag-atggtgaatgccaccctcatgaacattgctgacaaccc 828

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            || || || |||||||| || |||||||||||| | |||||| || | || |||||  |
Sbjct: 829 aacaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattat 888

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            ||||| |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||
Sbjct: 889 tgtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatgga 948

                          
Query: 287 gaagttctactgggc 301
           |||||||||||||||
Sbjct: 949 gaagttctactgggc 963

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  145 bits (73), Expect = 2e-31
 Identities = 238/292 (81%), Gaps = 1/292 (0%)
 Strand = Plus / Plus

                                                                       
Query: 53  tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 112
           ||||| || ||||| |||||||| || ||||| |||||| | || || || || || |||
Sbjct: 582 tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 641

                                                                       
Query: 113 accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 172
           || || ||||||||  |||||||| || ||||| |||||||| || ||    || |||||
Sbjct: 642 actgtgaacaacca-aatggtgaatgctaccctcatgaacattgctgacaatccaaccaa 700

                                                                       
Query: 173 cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 232
            || |||||||| || |||||||||||||| ||||| || ||||| || ||| |||||||
Sbjct: 701 tgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcac 760

                                                                       
Query: 233 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 292
            ||||| || ||||||||  | ||||||||||| || |||||||||||||||||||| ||
Sbjct: 761 aggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaatt 820

                                                               
Query: 293 ctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 344
           ||||||||| |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 821 ctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  145 bits (73), Expect = 2e-31
 Identities = 238/292 (81%), Gaps = 1/292 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 112
            ||||| || ||||| |||||||| || ||||| |||||| | || || || || || |||
Sbjct: 755  tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 814

                                                                        
Query: 113  accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 172
            || || ||||||||  |||||||| || ||||| |||||||| || ||    || |||||
Sbjct: 815  actgtgaacaacca-aatggtgaatgctaccctcatgaacattgctgacaatccaaccaa 873

                                                                        
Query: 173  cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 232
             || |||||||| || |||||||||||||| ||||| || ||||| || ||| |||||||
Sbjct: 874  tgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcac 933

                                                                        
Query: 233  cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 292
             ||||| || ||||||||  | ||||||||||| || |||||||||||||||||||| ||
Sbjct: 934  aggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaatt 993

                                                                
Query: 293  ctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 344
            ||||||||| |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 994  ctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  135 bits (68), Expect = 2e-28
 Identities = 209/255 (81%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 729 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 788

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           || ||||| |||||||||||  |||||||| ||||| || |||||||| || ||   |||
Sbjct: 789 caatacactgtcaacaacca-aatggtgaatgccactctcatgaacattgctgacaaccc 847

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            || || || |||||||| || |||||||||||| | |||||  || | || || ||  |
Sbjct: 848 gacaaatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattat 907

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
           |||||| |||||||||||||| ||  | || ||||| || ||||||||||||||||||||
Sbjct: 908 cgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgga 967

                          
Query: 287 gaagttctactgggc 301
           |||||||||||||||
Sbjct: 968 gaagttctactgggc 982

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 8e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 191 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 250
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 251 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 310
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 311 tgacgaccgtatcggtgtctgca 333
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  119 bits (60), Expect = 1e-23
 Identities = 207/255 (81%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
           ||||| ||||||||||||||||||||||| || || || ||||| ||||| ||||| || 
Sbjct: 746 atgtgttgcctcttcatcaacgatcttgatgcaggagccggtagaatgggtggaactaca 805

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           || ||||| |||||||||||  |||||||| || || || |||||||| || |||  |||
Sbjct: 806 caatacactgtcaacaacca-aatggtgaatgctacactcatgaacattgctgataaccc 864

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            || || || || ||||| || |||||||||||| | |||||  || | || || ||  |
Sbjct: 865 gacgaatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacctattat 924

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            ||||| |||||||||||||| ||  | || || ||||| ||||||||||||||||||||
Sbjct: 925 tgtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatgga 984

                          
Query: 287 gaagttctactgggc 301
           ||| |||||||||||
Sbjct: 985 gaaattctactgggc 999



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 375  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 428
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  107 bits (54), Expect = 5e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                        
Query: 59   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 118
            |||||||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| 
Sbjct: 1857 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 1916

                                                      
Query: 119  aacaaccagnatggtgaacgccaccctgatgaacatcgccga 160
            ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1917 aacaaccag-atggtgaacgccaccctgatgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 387  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 446
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 447  ga 448
            ||
Sbjct: 2722 ga 2723

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  105 bits (53), Expect = 2e-19
 Identities = 176/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 86  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccct 145
           ||||| ||||| ||||| || || ||||| |||||||||||  |||||||| ||||| ||
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaacca-aatggtgaatgccactct 66

                                                                       
Query: 146 gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 205
            |||||||| || ||   ||| || || || |||||||| || |||||||||||| | ||
Sbjct: 67  catgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaaga 126

                                                                       
Query: 206 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 265
           |||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| ||
Sbjct: 127 gaatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccact 186

                                               
Query: 266 gatccgtgatggtcgtatggagaagttctactgggc 301
            |||||||||||||||||||||||||||||||||||
Sbjct: 187 tatccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 375 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 424
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 215/270 (79%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
            |||||||| ||||||||||| |||||||| || || || ||||| ||||| || || || 
Sbjct: 7160 atgtgctgtctcttcatcaatgatcttgatgcaggagctggtagaatgggtggcactact 7101

                                                                        
Query: 107  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
            || ||||| |||||||||||| ||||| || || ||||| |||||||| || ||   |||
Sbjct: 7100 caatacacagtcaacaaccag-atggtaaatgcaaccctcatgaacattgctgacaaccc 7042

                                                                        
Query: 167  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
             ||||| || || || || || ||||||||||| || |||||  |||| || || ||| |
Sbjct: 7041 taccaatgttcaacttcccggtatgtacaacaaagaagagaatgcccgcgtccctatcat 6982

                                                                        
Query: 227  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            |||||| || || || ||||| ||| | || |||||| | || |||||||| ||||||||
Sbjct: 6981 cgtcactggcaatgacttctctacgttgtatgctcctttaattcgtgatggacgtatgga 6922

                                          
Query: 287  gaagttctactgggctcccacccgtgacga 316
             || ||||||||||| || || ||||||||
Sbjct: 6921 aaaattctactgggcacctactcgtgacga 6892

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 207/261 (79%), Gaps = 1/261 (0%)
 Strand = Plus / Plus

                                                                        
Query: 62   atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 121
            |||||||||||||| ||||| || || ||| | || || || || |||||||| || || 
Sbjct: 759  atcaacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaat 818

                                                                        
Query: 122  aaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagct 181
            |||||| ||||| || || || || |||||||| || ||   ||| ||||| ||||||||
Sbjct: 819  aaccag-atggtaaatgctactcttatgaacattgctgacaacccaaccaatgtgcagct 877

                                                                        
Query: 182  ccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacga 241
             || |||||||| |||||||| || || ||| | || |||||| | || || ||||||||
Sbjct: 878  accaggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacga 937

                                                                        
Query: 242  tttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 301
             ||||| ||| | || || ||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 938  cttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattctactgggc 997

                                 
Query: 302  tcccacccgtgacgaccgtat 322
            ||| || ||||| || |||||
Sbjct: 998  tccaactcgtgaagatcgtat 1018



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 384  gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 443
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 444  gacgatgaggtgcgcaagtggg 465
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                          
Query: 107    cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
              |||||||||||||||| |||   |||||| ||||||||||||||||||||||||   |||
Sbjct: 445720 cagtacaccgtcaacacccaac-tggtgagcgccaccctgatgaacatcgccgacaaccc 445662

                             
Query: 167    caccaacgtgcagct 181
              |||||||||||||||
Sbjct: 445661 caccaacgtgcagct 445647

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                       
Query: 558 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 617
           |||||||||||||| ||  ||||||| |||||||||||||||||||| ||| | || || 
Sbjct: 3   aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62

                                                                   
Query: 618 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 673
           || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| ||||
Sbjct: 63  ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 155/193 (80%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                       
Query: 107 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
           |||||||| || ||||||||| ||||| || |||||||| |||||||| || |||  |||
Sbjct: 487 cagtacactgtgaacaaccag-atggtcaatgccaccctcatgaacattgctgataaccc 545

                                                                       
Query: 167 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
            || || || ||| | ||||| |||||||||||||| || || || ||||| || || ||
Sbjct: 546 aacgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgt 605

                                                                       
Query: 227 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
            || || || || |||||||| ||  | || |||||  |||| |||||||| ||||||||
Sbjct: 606 tgtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatgga 665

                        
Query: 287 gaagttctactgg 299
           |||||||||||||
Sbjct: 666 gaagttctactgg 678

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 288 aagttctactgg 299
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 199/255 (78%), Gaps = 1/255 (0%)
 Strand = Plus / Minus

                                                                          
Query: 47     atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 107    cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
              |||||||| || ||||| ||  ||||| || || || || |||||||| || |||  |||
Sbjct: 104018 cagtacacagtgaacaatca-aatggtaaatgcaacacttatgaacattgctgataaccc 103960

                                                                          
Query: 167    caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
               || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| |
Sbjct: 103959 aacaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcat 103900

                                                                          
Query: 227    cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
               || || ||||| ||||| || ||  | || |||||||| || ||||| |||||||||||
Sbjct: 103899 tgttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatgga 103840

                             
Query: 287    gaagttctactgggc 301
              ||| ||||| |||||
Sbjct: 103839 gaaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 199/255 (78%), Gaps = 1/255 (0%)
 Strand = Plus / Minus

                                                                         
Query: 47    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 106
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 107   cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 166
             |||||||| || ||||| ||  ||||| || || || || |||||||| || |||  |||
Sbjct: 83043 cagtacacagtgaacaatca-aatggtaaatgcaacacttatgaacattgctgataaccc 82985

                                                                         
Query: 167   caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 226
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| |
Sbjct: 82984 aacaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcat 82925

                                                                         
Query: 227   cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 286
              || || ||||| ||||| || ||  | || |||||||| || ||||| |||||||||||
Sbjct: 82924 tgttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatgga 82865

                            
Query: 287   gaagttctactgggc 301
             ||| ||||| |||||
Sbjct: 82864 gaaattctattgggc 82850

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 288 aagttctactgg 299
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 288 aagttctactgg 299
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 288 aagttctactgg 299
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 288 aagttctactgg 299
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 228   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 287
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 288   aagttctactgg 299
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 237 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 296
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 297 tgg 299
           |||
Sbjct: 996 tgg 998

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 123/154 (79%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 114
           |||||||||||| |||||||| || || || |||||  | || ||||| || || || ||
Sbjct: 36  cctcttcatcaatgatcttgatgcaggggctggtagacttggtggaactacacaatatac 95

                                                                       
Query: 115 cgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacg 174
            ||||| |||||| |||||||| || ||||| |||||||| || |||   || || || |
Sbjct: 96  agtcaataaccag-atggtgaatgcaacccttatgaacattgctgataatccaactaatg 154

                                             
Query: 175 tgcagctccctggcatgtacaacaaggaggagaa 208
           | ||||||||||| |||||||||||  |||||||
Sbjct: 155 ttcagctccctggtatgtacaacaaacaggagaa 188

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 636   agccaggcagctctgggtgatg 657
             ||||||||||||||||||||||
Sbjct: 51254 agccaggcagctctgggtgatg 51275

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 377  caagatcgtcgacaccttccc 397
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 228 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 286
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 287 gaagttctactgg 299
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 324   ggtgtctgcaagggtatcttccag 347
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1565 tgagccaggcagctctgggcgatg 1542

---

>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 607 agcgtgtgcagcttgctgac 626
           ||||||||||||||||||||
Sbjct: 223 agcgtgtgcagcttgctgac 242

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 agtgacgagtctgtcgtcaa 379
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 588    caggagcaggacaatgtcaa 607
              ||||||||||||||||||||
Sbjct: 126419 caggagcaggacaatgtcaa 126438

---

>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1659 tgagccaggcagctctgggcgatg 1636

---

>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 2026 tgagccaggcagctctgggcgatg 2003

---

>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     cgtgacgaccgtatcggtgt 328
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgatgaacatcgccgatgcc 164
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgatgaacatcgccgatgcc 164
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    caggagcaggacaatgtcaa 607
              ||||||||||||||||||||
Sbjct: 106979 caggagcaggacaatgtcaa 106960

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tgatgaacatcgccgatgcc 164
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 634  tgagccaggcagctctgggtgatg 657
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgatgaacatcgccgatgcc 164
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,439,828
Number of Sequences: 3902068
Number of extensions: 3439828
Number of successful extensions: 65823
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65365
Number of HSP's gapped (non-prelim): 324
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---