ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalc23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel al... 32 1.2
2HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHR... 30 6.0

>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.1)
           (Cav3.1c) (NBR13)
          Length = 2377

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 366 SEPAPHGAADARPQDTLGRGCRRRHRADSHRQAVQPHPHDCHHPYL 503
           S PAP G  + +P  +    C R HR  S    V  H H  HH +L
Sbjct: 466 SSPAPLGGQETQPSSS----CSRSHRRLSVHHLVHHHHHHHHHYHL 507



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>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = +3

Query: 381 HGAADARPQDTLGRGCRRRHRADSHRQAVQPHPHDCHHPYLRVAARFRGARH 536
           H A DA             H AD+H  A   H  D HH +    A    A H
Sbjct: 250 HHATDAHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHH 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,863,935
Number of Sequences: 219361
Number of extensions: 886648
Number of successful extensions: 2891
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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