ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4g17 | 430 | AV910392 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4g16 | 725 | AV910391 | not_full | dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J07, full insert sequence Length = 2462 | 477 | not_full | HSP7S_SPIOL (Q08080) Stromal 70 kDa heat shock-related protein, chloroplast (Fragment) Length = 599 | 500 | -- | --- | - | -- | --- | - |
| baak4g15 | 495 | AV910390 | not_full | ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 | 109 | not_full | S35C2_MOUSE (Q8VCX2) Solute carrier family 35 member C2 (Ovarian cancer overexpressed gene 1 protein) Length = 364 | 25 | -- | --- | - | -- | --- | - |
| baak4g14 | 159 | AV832515 | not_full | ref|NM_190292.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 | 64 | not_full | RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC 2.7.11.1) Length = 423 | 142 | -- | --- | - | -- | --- | - |
| baak4g13 | 434 | AV910389 | not_full | emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 | 90 | not_full | PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 | 32 | -- | --- | - | -- | --- | - |
| baak4g12 | 393 | AV910388 | not_full | gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA, complete cds Length = 990 | 46 | not_full | PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 235 | 33 | -- | --- | - | -- | --- | - |
| baak4g11 | 552 | AV910387 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 416 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| baak4g10 | 231 | AV910386 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 148 | not_full | RR8_WHEAT (Q95H52) Chloroplast 30S ribosomal protein S8 Length = 136 | 352 | -- | --- | - | -- | --- | - |
| baak4g09 | 460 | AV910385 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 408 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 168 | -- | --- | - | -- | --- | - |
| baak4g08 | 475 | AV910384 | not_full | dbj|AK062468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E04, full insert sequence Length = 594 | 126 | not_full | HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 | 10 | -- | --- | - | -- | --- | - |
| baak4g07 | 460 | AV910383 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 378 | full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 161 | -- | --- | - | -- | --- | - |
| baak4g06 | 404 | AV910382 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 48 | not_full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 92 | -- | --- | - | -- | --- | - |
| baak4g05 | 542 | AV910381 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 116 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 40 | -- | --- | - | -- | --- | - |
| baak4g04 | 677 | AV910380 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 263 | -- | --- | - | -- | --- | - |
| baak4g03 | 513 | AV910379 | not_full | ref|XM_472379.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 | 40 | not_full | TSC10_YARLI (Q6CE86) 3-ketodihydrosphingosine reductase TSC10 (EC 1.1.1.102) (3-dehydrosphinganine reductase) (KDS reductase) Length = 372 | 69 | -- | --- | - | -- | --- | - |
| baak4g02 | 464 | AV910378 | not_full | gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds Length = 768 | 96 | not_full | ACP1_HORVU (P02902) Acyl carrier protein 1, chloroplast precursor (Acyl carrier protein I) (ACP I) Length = 149 | 202 | -- | --- | - | -- | --- | - |
| baak4g01 | 480 | AV910377 | not_full | emb|X15233.1|TAPGKCHL Wheat mRNA for chloroplast phosphoglycerate kinase (EC 2.7.2.3) Length = 1605 | 238 | not_full | PGKH_WHEAT (P12782) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 480 | 265 | -- | --- | - | -- | --- | - |
| baak4f24 | 385 | AV910376 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4f23 | 533 | AV910375 | not_full | gb|BT009086.1| Triticum aestivum clone wkm1c.pk005.m4:fis, full insert mRNA sequence Length = 1052 | 46 | not_full | DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta) (DAG kinase theta) Length = 942 | 21 | -- | --- | - | -- | --- | - |
| baak4f22 | 550 | AV910374 | not_full | gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 | 205 | not_full | CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) Length = 270 | 83 | -- | --- | - | -- | --- | - |
| baak4f21 | 418 | AV910373 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 341 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 13 | -- | --- | - | -- | --- | - |
| baak4f20 | 512 | AV910372 | not_full | ref|XM_476717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4245 | 89 | not_full | ALDO1_ARATH (Q7G193) Aldehyde oxidase 1 (EC 1.2.3.1) (AtAO-1) (AtAO1) Length = 1368 | 9 | -- | --- | - | -- | --- | - |
| baak4f19 | 384 | AV910371 | not_full | gb|AF274001.1|AF274001 Triticum aestivum oxidase (IM1) mRNA, partial cds Length = 1073 | 43 | not_full | AOX4_ARATH (Q56X52) Alternative oxidase 4, chloroplast precursor (EC 1.-.-.-) (Protein IMMUTANS) (Plastid terminal oxidase) Length = 351 | 20 | -- | --- | - | -- | --- | - |
| baak4f18 | 423 | AV910370 | not_full | dbj|AK120879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J05, full insert sequence Length = 504 | 42 | not_full | CLPX_MOUSE (Q9JHS4) ATP-dependent Clp protease ATP-binding subunit ClpX-like, mitochondrial precursor Length = 634 | 11 | -- | --- | - | -- | --- | - |
| baak4f17 | 365 | AV910369 | not_full | gb|AY838897.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 1 (NCED1) mRNA, complete cds Length = 2119 | 61 | not_full | RPE65_MOUSE (Q91ZQ5) Retinal pigment epithelium-specific 65 kDa protein Length = 532 | 14 | -- | --- | - | -- | --- | - |
| baak4f16 | 531 | AV910368 | not_full | ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2178 | 61 | not_full | YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor Length = 995 | 38 | -- | --- | - | -- | --- | - |
| baak4f14 | 218 | AV910367 | not_full | gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds Length = 842 | 4 | not_full | WIR1A_WHEAT (Q01482) WIR1A protein Length = 88 | 17 | -- | --- | - | -- | --- | - |
| baak4f13 | 440 | AV832514 | not_full | emb|Z15116.1|HVPAZXG H.vulgare pazx gene encoding protein zx Length = 3283 | 114 | not_full | PRTZ_HORVU (P06293) Protein Z (Z4) (Major endosperm albumin) Length = 399 | 201 | -- | --- | - | -- | --- | - |
| baak4f12 | 565 | AV910366 | not_full | ref|XM_463918.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2037 | 29 | not_full | SCS_SALOF (O81191) 1,8-cineole synthase, chloroplast precursor (EC 4.2.3.-) (SCS) Length = 591 | 36 | -- | --- | - | -- | --- | - |
| baak4f11 | 432 | AV910365 | not_full | emb|X66428.1|HVPSANMR H.vulgare mRNA PsaN for photosystem I subunit N Length = 665 | 83 | not_full | PSAN_HORVU (P31093) Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) Length = 145 | 12 | -- | --- | - | -- | --- | - |
| baak4f10 | 477 | AV910364 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 44 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 24 | -- | --- | - | -- | --- | - |
| baak4f09 | 503 | AV910363 | not_full | ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 | 244 | not_full | CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 | 107 | -- | --- | - | -- | --- | - |
| baak4f08 | 430 | AV910362 | not_full | ref|XM_463527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 | 62 | not_full | BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript 2) Length = 2157 | 3 | -- | --- | - | -- | --- | - |
| baak4f07 | 206 | AV910361 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 477 | -- | --- | - | -- | --- | - |
| baak4f06 | 603 | AV910360 | not_full | ref|XM_465573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 12573 | 79 | not_full | CP126_MYCTU (P63711) Putative cytochrome P450 126 (EC 1.14.-.-) Length = 414 | 8 | -- | --- | - | -- | --- | - |
| baak4f04 | 444 | AV910359 | not_full | emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl-ACP synthase Length = 2380 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4f03 | 565 | AV910358 | not_full | dbj|AB218888.1| Hordeum vulgare CAX mRNA for cation/H+ exchanger, complete cds Length = 1300 | 112 | not_full | CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) Length = 417 | 13 | -- | --- | - | -- | --- | - |
| baak4f02 | 496 | AV910357 | not_full | gb|BT018346.1| Zea mays clone EL01T0403D12.c mRNA sequence Length = 681 | 52 | not_full | SYM_STRCO (Q9F2I9) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) Length = 538 | 5 | -- | --- | - | -- | --- | - |
| baak4e24 | 694 | AV910356 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 424 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 166 | -- | --- | - | -- | --- | - |
| baak4e23 | 510 | AV910355 | full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 343 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 16 | -- | --- | - | -- | --- | - |
| baak4e22 | 522 | AV910354 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 244 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 33 | -- | --- | - | -- | --- | - |
| baak4e21 | 531 | AV910353 | not_full | ref|XM_468402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1592 | 44 | not_full | NDUA9_NEUCR (P25284) NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-40KD) (CI-40KD) Length = 375 | 33 | -- | --- | - | -- | --- | - |
| baak4e20 | 243 | AV910352 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 314 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 11 | -- | --- | - | -- | --- | - |
| baak4e19 | 320 | AV910351 | not_full | ref|XM_468577.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 | 51 | not_full | RK11_ARATH (Q9MAP3) 50S ribosomal protein L11, chloroplast precursor (CL11) Length = 222 | 252 | -- | --- | - | -- | --- | - |
| baak4e18 | 599 | AV910350 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4e17 | 532 | AV910349 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 407 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 159 | -- | --- | - | -- | --- | - |
| baak4e16 | 491 | AV910348 | not_full | emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 | 488 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 163 | -- | --- | - | -- | --- | - |
| baak4e15 | 593 | AV910347 | full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 406 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| baak4e14 | 216 | AV832513 | not_full | ref|XM_472768.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 | 11 | not_full | PA2A_PSEAU (P20255) Phospholipase A2 isozyme PA-12A (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase) Length = 118 | 5 | -- | --- | - | -- | --- | - |
| baak4e13 | 219 | AV832512 | not_full | ref|NM_185109.1| Oryza sativa (japonica cultivar-group), mRNA Length = 681 | 11 | not_full | FAHD1_PONPY (Q5RDW0) Fumarylacetoacetate hydrolase domain-containing protein 1 (EC 3.-.-.-) Length = 224 | 16 | -- | --- | - | -- | --- | - |
