ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4g07 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 246 bits (629), Expect = 2e-65 Identities = 117/127 (92%), Positives = 122/127 (96%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 GK+VKN+ SSAL G+ARV MRKTAAKAKQVSS SPWYG+DRVLYLGPLSGEPPSYLTGEF Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKA 134 Query: 439 GSQIFSE 459 GSQIFS+ Sbjct: 135 GSQIFSD 141
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 235 bits (599), Expect = 5e-62 Identities = 118/128 (92%), Positives = 121/128 (94%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+V NV SS+ FGEARVTMRKTAAKAK + SGSPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 133 AGSQIFSE 140
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 234 bits (597), Expect = 8e-62 Identities = 114/120 (95%), Positives = 115/120 (95%), Gaps = 1/120 (0%) Frame = +1 Query: 103 SSALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 279 SSALFGEAR+TMRKTAAK K SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD Sbjct: 21 SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80 Query: 280 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 140
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 233 bits (595), Expect = 1e-61 Identities = 119/128 (92%), Positives = 120/128 (93%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+V NV SS LFGEARVTMRKTAAKAK SSGSPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 133 AGSQIFSE 140
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 231 bits (588), Expect = 9e-61 Identities = 108/120 (90%), Positives = 114/120 (95%) Frame = +1 Query: 100 ASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 279 A++ +FGE R+TMRK+AAK K +SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD Sbjct: 17 AAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 76 Query: 280 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE Sbjct: 77 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 136
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 229 bits (585), Expect = 2e-60 Identities = 111/128 (86%), Positives = 117/128 (91%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 229 bits (584), Expect = 3e-60 Identities = 111/128 (86%), Positives = 117/128 (91%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 134 AGSQIFSE 141
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 229 bits (583), Expect = 3e-60 Identities = 111/128 (86%), Positives = 115/128 (89%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G RVTMRKTA KAK SSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 228 bits (581), Expect = 6e-60 Identities = 111/128 (86%), Positives = 116/128 (90%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 134 AGSQIFSE 141 Score = 31.2 bits (69), Expect = 1.3 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 5/114 (4%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPL-----SGEPPSY 243 G++V A S +F E + + S + W A +V+ +G + +GEP Sbjct: 127 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW--ACQVVLMGAVEGYRVAGEPLGE 184 Query: 244 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 + +D GL+ DPE FA+ + E+ + R AM G L+ G Sbjct: 185 VVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKG 238
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 226 bits (577), Expect = 2e-59 Identities = 109/128 (85%), Positives = 115/128 (89%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKT KAK +SSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 226 bits (575), Expect = 3e-59 Identities = 107/127 (84%), Positives = 111/127 (87%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 GK+V +SS + G + TMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 439 GSQIFSE 459 GSQIFSE Sbjct: 135 GSQIFSE 141
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 225 bits (573), Expect = 5e-59 Identities = 108/128 (84%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK +S + GE R+TMRKTA K K V S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 223 bits (568), Expect = 2e-58 Identities = 108/128 (84%), Positives = 113/128 (88%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G + TMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 223 bits (567), Expect = 2e-58 Identities = 107/128 (83%), Positives = 115/128 (89%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKTA+KAK VSS SPWYG +RV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 GSQIFS+ Sbjct: 135 GGSQIFSQ 142 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +1 Query: 220 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 399 ++GEP + +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 400 NG 405 G Sbjct: 238 KG 239
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 223 bits (567), Expect = 2e-58 Identities = 108/128 (84%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK VK + +SS + G + TMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW K Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 222 bits (565), Expect = 4e-58 Identities = 107/128 (83%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 G +VK + +SS + G + MRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 135 AGSQIFSE 142
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 219 bits (559), Expect = 2e-57 Identities = 102/116 (87%), Positives = 105/116 (90%) Frame = +1 Query: 112 LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 291 +FGE R+TMRKTAAK K SGSPWYGADRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 292 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 SADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKAGSQIFSE Sbjct: 84 SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSE 139
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 219 bits (559), Expect = 2e-57 Identities = 102/115 (88%), Positives = 105/115 (91%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 FGE R+TMRKT K K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSE Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE 137
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 218 bits (556), Expect = 4e-57 Identities = 104/128 (81%), Positives = 111/128 (86%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +SS + G +VTMRKT KAK SS SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFK Sbjct: 75 FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFK 134 Query: 436 AGSQIFSE 459 AG+QIFSE Sbjct: 135 AGAQIFSE 142
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 217 bits (553), Expect = 1e-56 Identities = 106/128 (82%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + +S +FG RVTMRKT SGSPWYG+DRV YLGP SGEPPSYLTGE Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 133 AGSQIFSE 140
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 217 bits (553), Expect = 1e-56 Identities = 103/127 (81%), Positives = 108/127 (85%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 GK+V +SS + +VTMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 439 GSQIFSE 459 GSQIF E Sbjct: 135 GSQIFKE 141
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 215 bits (547), Expect = 5e-56 Identities = 104/127 (81%), Positives = 108/127 (85%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 GK +K SS G AR TMRK+A K SSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 18 GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 78 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 137 Query: 439 GSQIFSE 459 GSQIFSE Sbjct: 138 GSQIFSE 144
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 215 bits (547), Expect = 5e-56 Identities = 106/128 (82%), Positives = 113/128 (88%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK + A+S + G RVTMRKT AK K SGSPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 436 AGSQIFSE 459 AGSQIFS+ Sbjct: 134 AGSQIFSD 141
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 214 bits (546), Expect = 6e-56 Identities = 107/128 (83%), Positives = 114/128 (89%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VKN++SS+ + G+ARV+MRKTAA K GSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLTGE 71 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 436 AGSQIFSE 459 GSQIFSE Sbjct: 132 KGSQIFSE 139
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 213 bits (543), Expect = 1e-55 Identities = 107/127 (84%), Positives = 111/127 (87%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 GK+VK S+ G RV+MRKT K QVSSGSPWYG DRV YLGP SGEPPSYLTGEF Sbjct: 16 GKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 72 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 131 Query: 439 GSQIFSE 459 GSQIFSE Sbjct: 132 GSQIFSE 138
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 213 bits (543), Expect = 1e-55 Identities = 102/114 (89%), Positives = 106/114 (92%) Frame = +1 Query: 118 GEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 297 G A+ TMRKTA+K+ VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSA Sbjct: 19 GNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 76 Query: 298 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 DPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSE Sbjct: 77 DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE 130
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 213 bits (542), Expect = 2e-55 Identities = 105/128 (82%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+V + A+S + G RVTMRKT AK K SGSPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 436 AGSQIFSE 459 AGSQIFS+ Sbjct: 134 AGSQIFSD 141
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 213 bits (542), Expect = 2e-55 Identities = 102/119 (85%), Positives = 105/119 (88%), Gaps = 1/119 (0%) Frame = +1 Query: 106 SALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 282 + + GEARVTMRK K S S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90 Query: 283 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 149
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 212 bits (540), Expect = 3e-55 Identities = 105/129 (81%), Positives = 109/129 (84%), Gaps = 2/129 (1%) Frame = +1 Query: 79 GKSVKNVA--SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 252 GK V+ A SS G AR TMRK+A K SSGSPWYG DRV YLGP SGE PSYLTG Sbjct: 15 GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74 Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 432 EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF Sbjct: 75 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 134 Query: 433 KAGSQIFSE 459 KAGSQIFSE Sbjct: 135 KAGSQIFSE 143
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 212 bits (540), Expect = 3e-55 Identities = 104/128 (81%), Positives = 111/128 (86%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 G++VK + ++S + G R+TMRK A AK S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 133 AGSQIFSE 140
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 212 bits (540), Expect = 3e-55 Identities = 104/128 (81%), Positives = 112/128 (87%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 G++VK + ++ + G RV+MRKT AK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 133 AGSQIFSE 140
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 212 bits (539), Expect = 4e-55 Identities = 103/119 (86%), Positives = 106/119 (89%) Frame = +1 Query: 103 SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 282 S+ G RV+MRKTA+K VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 4 STPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 61 Query: 283 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQIFSE Sbjct: 62 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSE 120
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 210 bits (535), Expect = 1e-54 Identities = 106/128 (82%), Positives = 109/128 (85%), Gaps = 1/128 (0%) Frame = +1 Query: 79 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 GK+VK SS+ LFG RV+MRKT K S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 436 AGSQIFSE 459 AGSQIFSE Sbjct: 132 AGSQIFSE 139
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 210 bits (534), Expect = 2e-54 Identities = 101/115 (87%), Positives = 104/115 (90%), Gaps = 1/115 (0%) Frame = +1 Query: 118 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 GEAR+TMRK T K+ S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 153
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 209 bits (532), Expect = 3e-54 Identities = 100/115 (86%), Positives = 104/115 (90%), Gaps = 1/115 (0%) Frame = +1 Query: 118 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 GEAR+TMRK T K+ S SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 153
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 196 bits (497), Expect = 3e-50 Identities = 92/115 (80%), Positives = 99/115 (86%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 FGE R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSE 140
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 195 bits (495), Expect = 5e-50 Identities = 96/126 (76%), Positives = 103/126 (81%) Frame = +1 Query: 82 KSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFP 261 K V ++ GEARV M +KA SGS WYG+DR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 262 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 441 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 134 Query: 442 SQIFSE 459 SQIF+E Sbjct: 135 SQIFAE 140
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 190 bits (482), Expect = 2e-48 Identities = 89/100 (89%), Positives = 91/100 (91%) Frame = +1 Query: 160 KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 339 K SS SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 340 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSE Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE 103
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 189 bits (481), Expect = 2e-48 Identities = 90/115 (78%), Positives = 96/115 (83%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 FG R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSE 140
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 189 bits (481), Expect = 2e-48 Identities = 90/115 (78%), Positives = 96/115 (83%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 F R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSE Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSE 140
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 188 bits (477), Expect = 6e-48 Identities = 90/111 (81%), Positives = 95/111 (85%) Frame = +1 Query: 127 RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 306 RV+MR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 307 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 TFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAGSQIF E Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQE 139
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 188 bits (477), Expect = 6e-48 Identities = 90/114 (78%), Positives = 96/114 (84%) Frame = +1 Query: 118 GEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 297 G RV+MR+T A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTVKSAPT----SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 298 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 DPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSE Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSE 140
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 188 bits (477), Expect = 6e-48 Identities = 90/115 (78%), Positives = 96/115 (83%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSE Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSE 112
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 186 bits (472), Expect = 2e-47 Identities = 89/115 (77%), Positives = 96/115 (83%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 FG+AR TMR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 295 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 ADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAGSQIF+E Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAE 140
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 186 bits (472), Expect = 2e-47 Identities = 88/113 (77%), Positives = 96/113 (84%) Frame = +1 Query: 121 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 +AR+TMR+T A + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 301 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 PETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QIFSE Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSE 141
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 184 bits (467), Expect = 9e-47 Identities = 87/111 (78%), Positives = 95/111 (85%) Frame = +1 Query: 127 RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 306 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 307 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSE Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 183 bits (465), Expect = 2e-46 Identities = 96/127 (75%), Positives = 101/127 (79%) Frame = +1 Query: 79 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 258 G+++K S+ G RV+MRKTA K VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72 Query: 259 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 438 G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA Sbjct: 73 HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 124 Query: 439 GSQIFSE 459 GSQIFSE Sbjct: 125 GSQIFSE 131
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 183 bits (465), Expect = 2e-46 Identities = 87/113 (76%), Positives = 98/113 (86%) Frame = +1 Query: 121 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 EARVTMR+T +K+ S + WYGADR +LGP SGE PSYL GEF GDYGWDTAGLS+D Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 90 Query: 301 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 PETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAG+QIFSE Sbjct: 91 PETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSE 143 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 180 bits (457), Expect = 1e-45 Identities = 85/113 (75%), Positives = 95/113 (84%) Frame = +1 Query: 121 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 + R +MR+T Q S WYGADR +LGP S + PSYLTGEFPGDYGWDTAGLSAD Sbjct: 31 DGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86 Query: 301 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 PETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAG+QIFSE Sbjct: 87 PETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSE 139
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 166 bits (421), Expect = 2e-41 Identities = 77/81 (95%), Positives = 78/81 (96%) Frame = +1 Query: 217 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 396 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 397 RNGVKFGEAVWFKAGSQIFSE 459 RNGVKFGEAVWFKAGSQIFSE Sbjct: 61 RNGVKFGEAVWFKAGSQIFSE 81
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 160 bits (405), Expect = 1e-39 Identities = 82/119 (68%), Positives = 93/119 (78%), Gaps = 2/119 (1%) Frame = +1 Query: 109 ALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 282 AL + T +KTAAKA SSG +YG +R +LGP S P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 283 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 459 AGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+QIFSE Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSE 128
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 157 bits (398), Expect = 9e-39 Identities = 86/122 (70%), Positives = 90/122 (73%) Frame = +1 Query: 94 NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 273 N SS L A TM K AAK+K SS RV YLGP SGE PSYLTGEFPGDYG Sbjct: 27 NPISSTLIVTAGFTMLKHAAKSKVSSSTCD----RRVKYLGPFSGEWPSYLTGEFPGDYG 82 Query: 274 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 453 WDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+QIF Sbjct: 83 WDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIF 142 Query: 454 SE 459 SE Sbjct: 143 SE 144
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 157 bits (397), Expect = 1e-38 Identities = 77/106 (72%), Positives = 86/106 (81%), Gaps = 2/106 (1%) Frame = +1 Query: 148 AAKAKQVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 324 AA +++ G+ WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR Sbjct: 37 AATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNR 96 Query: 325 ELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSE 459 LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAGSQIFSE Sbjct: 97 ALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSE 142 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 155 bits (392), Expect = 5e-38 Identities = 79/114 (69%), Positives = 88/114 (77%), Gaps = 1/114 (0%) Frame = +1 Query: 121 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 +A T + AA AK S+G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 301 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSE 459 PETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG+QIFSE Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSE 131 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 154 bits (389), Expect = 1e-37 Identities = 79/127 (62%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Frame = +1 Query: 82 KSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFP 261 K+ + G AR TM S WYG DRV YLGP S + PSYL GEFP Sbjct: 24 KNANPLRDVVAMGSARFTM-----------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFP 72 Query: 262 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKA 438 GDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKA Sbjct: 73 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKA 132 Query: 439 GSQIFSE 459 GSQIFS+ Sbjct: 133 GSQIFSD 139 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 137 bits (345), Expect = 1e-32 Identities = 64/94 (68%), Positives = 79/94 (84%), Gaps = 2/94 (2%) Frame = +1 Query: 184 WYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 360 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 361 GALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSE 459 GALG + PELL++ GV+FGE VWFKAG+QIF++ Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFAD 126 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 115 bits (287), Expect = 7e-26 Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 2/111 (1%) Frame = +1 Query: 133 TMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 312 T + A +K SS + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 313 AKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGSQIFSE 459 + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ IF + Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQD 149 Score = 32.3 bits (72), Expect = 0.59 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 405 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 98.2 bits (243), Expect = 9e-21 Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 4/116 (3%) Frame = +1 Query: 109 ALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 279 ALF + + K+ A ++ + WYG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 280 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGS 444 GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK G+ Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGA 152
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 84.0 bits (206), Expect = 2e-16 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%) Frame = +1 Query: 79 GKSVKNVASSALFGEA-RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 255 G V +S L G RV+ T A+ ++ DR L+ PP +L G Sbjct: 24 GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81 Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 435 PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ Sbjct: 82 LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYT 140 Query: 436 AGSQ 447 AG Q Sbjct: 141 AGEQ 144
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 77.4 bits (189), Expect = 2e-14 Identities = 43/121 (35%), Positives = 58/121 (47%) Frame = +1 Query: 85 SVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 264 S+ ++ G R+ + K A S AD L PP +L G PG Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84 Query: 265 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 444 D+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Sbjct: 85 DFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGE 143 Query: 445 Q 447 Q Sbjct: 144 Q 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 75.1 bits (183), Expect = 8e-14 Identities = 35/76 (46%), Positives = 48/76 (63%) Frame = +1 Query: 223 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 402 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 403 GVKFGEAVWFKAGSQI 450 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 72.4 bits (176), Expect = 5e-13 Identities = 35/73 (47%), Positives = 45/73 (61%) Frame = +1 Query: 232 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 411 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 412 FGEAVWFKAGSQI 450 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +1 Query: 235 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 414 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 415 GEAVWFKA 438 G+ +W++A Sbjct: 65 GKGIWYEA 72
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +1 Query: 229 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 408 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 409 KFGEAVWFKAGSQI 450 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.008 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +1 Query: 301 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 450 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +1 Query: 220 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 396 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 397 RNGVKFGEAVWFKA 438 G W KA Sbjct: 109 ------GLGNWVKA 116
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/71 (39%), Positives = 40/71 (56%) Frame = +1 Query: 235 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 414 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 415 GEAVWFKAGSQ 447 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 58.2 bits (139), Expect = 1e-08 Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%) Frame = +1 Query: 139 RKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET--- 309 RK + + S+ GA+R L+ S + SYL G PGD+G+D GLS DPE Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89 Query: 310 FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAG 441 F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ G Sbjct: 90 FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTG 138
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 57.4 bits (137), Expect = 2e-08 Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Frame = +1 Query: 91 KNVASSALFGEARV------TMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 252 K + S LF ++V T RK A + W A + G + P +L G Sbjct: 23 KKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDG 78 Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 432 PGD+G+D GL DP RE E+IH RWAML LG + A G+ WF Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP-----WF 131 Query: 433 KAGS 444 +AG+ Sbjct: 132 EAGA 135
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +1 Query: 235 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 414 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 415 GEAVWFKAGS 444 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.7 bits (130), Expect = 1e-07 Identities = 44/119 (36%), Positives = 53/119 (44%), Gaps = 5/119 (4%) Frame = +1 Query: 103 SSALFGEARVTMRKTAAK-----AKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGD 267 + AL G A VT R T K A V+ W A V G L P +L G PGD Sbjct: 24 TQALLG-AHVTARVTTPKRFVVAAAAVAPKKSWIPA--VKSGGNLVD--PEWLDGSLPGD 78 Query: 268 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 444 +G+D GL DP RE E+IH RWAM LG G + WF+AG+ Sbjct: 79 FGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAWSGIPWFEAGA 130
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/25 (88%), Positives = 24/25 (96%) Frame = +1 Query: 385 ELLARNGVKFGEAVWFKAGSQIFSE 459 ELL +NGVKFGEAVWFKAG+QIFSE Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSE 25
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 186 GK+VK + +SS + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 45.1 bits (105), Expect = 9e-05 Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Frame = +1 Query: 79 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPW 186 GK+VK SS+ + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 39.7 bits (91), Expect = 0.004 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +1 Query: 211 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 384 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 385 ELLARN--GVKFGEAVW 429 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 38.9 bits (89), Expect = 0.006 Identities = 40/141 (28%), Positives = 49/141 (34%), Gaps = 44/141 (31%) Frame = +1 Query: 133 TMRKTAAKAKQVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE- 306 T + + KAK V S P W+ + P YL G GDYG+D GL E Sbjct: 37 TKKASPKKAKTVISDRPLWFPG----------AKSPEYLDGSLVGDYGFDPFGLGKPAEY 86 Query: 307 ----------TFAKN--------------------------------RELEVIHCRWAML 360 AKN RE E+IH RWAML Sbjct: 87 LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146 Query: 361 GALGCVFPELLARNGVKFGEA 423 LG + E L GV + +A Sbjct: 147 ATLGAITVEWL--TGVTWQDA 165 Score = 33.5 bits (75), Expect = 0.27 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 202 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 372 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 37.4 bits (85), Expect = 0.018 Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 43/146 (29%) Frame = +1 Query: 115 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 FG+ + +K+A K V++ P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 295 ADPE-----------TFAKN--------------------------------RELEVIHC 345 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 346 RWAMLGALGCVFPELLARNGVKFGEA 423 RWAML LG + E L GV + +A Sbjct: 145 RWAMLATLGALSVEWL--TGVTWQDA 168 Score = 35.4 bits (80), Expect = 0.070 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 202 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 372 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 37.0 bits (84), Expect = 0.024 Identities = 41/143 (28%), Positives = 48/143 (33%), Gaps = 49/143 (34%) Frame = +1 Query: 142 KTAAKAKQVSSGSPWYGADRVLYLGPLSGEP----PSYLTGEFPGDYGWDTAGLSADPE- 306 K K S+G+ G Y G P P +L G PGD G+D GLS E Sbjct: 24 KATTKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEF 83 Query: 307 ----------TFAKN----------------------------------RELEVIHCRWA 354 AKN RE E+IH RWA Sbjct: 84 VVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWA 143 Query: 355 MLGALGCVFPELLARNGVKFGEA 423 ML LG + E A GV + EA Sbjct: 144 MLACLGALVAE--ATTGVSWVEA 164
>HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mobility group| AT-hook protein 2) Length = 109 Score = 35.8 bits (81), Expect = 0.054 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Frame = -1 Query: 349 TCSGSPQAPGSLQRSRGQPRARR-------CPNRSRQGTHRSSSSGAPRKA--DRGRAHG 197 + G P AP +R RG+PR ++ P R R G + S + +P KA + A G Sbjct: 14 SAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPR-GRPKGSKNKSPSKAAQKKAEATG 72 Query: 196 RHRTMGCPMKLAWPLQ 149 R G P K WP Q Sbjct: 73 EKRPRGRPRK--WPQQ 86
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 35.8 bits (81), Expect = 0.054 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 14/78 (17%) Frame = -1 Query: 379 RRIRAHRAWPTCSGSPQAPG---SLQRSRGQPRARRCPNRSRQGTH--------RSSSSG 233 RR+ HR +G +APG L++ PR R +R + G H + +G Sbjct: 108 RRVGGHRGRNRHAGDRRAPGVDSRLRQQHQHPRGRHASDRVQDGAHPRRQRLREQPRHAG 167 Query: 232 APRKAD---RGRAHGRHR 188 PR+ RGR+ G HR Sbjct: 168 RPRRRQPPRRGRSRGTHR 185 Score = 33.1 bits (74), Expect = 0.35 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 310 RSRGQPRARRCPNRSR-QGTHRSSSSGAPRKADRG 209 R G+PR R+ P R R +GTHR APR A RG Sbjct: 164 RHAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRG 198
>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)| Length = 392 Score = 35.8 bits (81), Expect = 0.054 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = -1 Query: 379 RRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAH 200 RR R+H P S S + RS + R RR ++SR+ HR S + R R Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318 Query: 199 GRH 191 RH Sbjct: 319 SRH 321
>LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2| Length = 392 Score = 35.8 bits (81), Expect = 0.054 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = -1 Query: 379 RRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAH 200 RR R+H P S S + RS + R RR ++SR+ HR S + R R Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318 Query: 199 GRH 191 RH Sbjct: 319 SRH 321
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 35.4 bits (80), Expect = 0.070 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%) Frame = +1 Query: 232 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 321 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 322 -------------RELEVIHCRWAMLGALGCVFPELL 393 RE E+IH RWAMLG LG + E L Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 202 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 369 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 34.7 bits (78), Expect = 0.12 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 14/84 (16%) Frame = -1 Query: 394 QEARGRRIRAHRAWPTCSGSPQA-----------PGSLQRSRG---QPRARRCPNRSRQG 257 +E+R +R + HR + S S + P S RS QPR+ R R+ Sbjct: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRRPRSESRSWSRDRQPRSHSYERRRRRR 69 Query: 256 THRSSSSGAPRKADRGRAHGRHRT 185 + SSS G+ RK R R+ GR ++ Sbjct: 70 SSSSSSYGSRRKRSRSRSRGRGKS 93
>HMGA2_MOUSE (P52927) High mobility group protein HMGI-C (High mobility group| AT-hook protein 2) Length = 108 Score = 34.7 bits (78), Expect = 0.12 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Frame = -1 Query: 349 TCSGSPQAPGSLQRSRGQPRARR-------CPNRSRQGTHRSSSSGAPRKADRGRAH--G 197 + G P AP +R RG+PR ++ P R R G + S + +P KA + +A G Sbjct: 14 SAQGQPAAPVPQKRGRGRPRKQQQEPTCEPSPKRPR-GRPKGSKNKSPSKAAQKKAETIG 72 Query: 196 RHRTMGCPMKLAWPLQ 149 R G P K WP Q Sbjct: 73 EKRPRGRPRK--WPQQ 86
>RSRC1_HUMAN (Q96IZ7) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 34.3 bits (77), Expect = 0.16 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 14/84 (16%) Frame = -1 Query: 394 QEARGRRIRAHRAWPTCSGSPQAP-------GSLQRSRG-------QPRARRCPNRSRQG 257 +E+R +R + HR + S S + G RS+ QPR+ R R Sbjct: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHR 69 Query: 256 THRSSSSGAPRKADRGRAHGRHRT 185 + SSS G+ RK R R+ GR ++ Sbjct: 70 SSSSSSYGSRRKRSRSRSRGRGKS 93 Score = 30.4 bits (67), Expect = 2.3 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 12/78 (15%) Frame = -1 Query: 376 RIRAHRAWPTCSGSPQAPGSLQRSRGQ------------PRARRCPNRSRQGTHRSSSSG 233 R R HR+ + S + S RSRG+ R RR +R R +H SS Sbjct: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123 Query: 232 APRKADRGRAHGRHRTMG 179 + + R R+ R R G Sbjct: 124 SSHRRTRSRSRDRERRKG 141 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = -1 Query: 385 RGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGR 206 RG+ R R+ ++ +RSR +PR R S + +HR + S R DR R Sbjct: 90 RGKSYRVQRS--------RSKSRTRRSRSRPRLRSHSRSSERSSHRRTRS---RSRDRER 138 Query: 205 AHGRHR 188 GR + Sbjct: 139 RKGRDK 144
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 34.3 bits (77), Expect = 0.16 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Frame = -3 Query: 434 LNHTASPNLTPLRARSSGKTHPSAPSMAHLQWITSSSRFFAKVSGSAESPAVSQP*SPGN 255 L+ +P L + + SAP+ HLQ + S+S+ ++ S+ SP+ +P +P Sbjct: 1325 LSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLL 1384 Query: 254 SPVK*LGG----SPES-GPR*S-TRSAPYHG 180 P LG SPE+ GPR + +A +HG Sbjct: 1385 YPQMALGTSSAISPETDGPRVTEPEAASFHG 1415
>TRSF_DROSI (Q24669) Female-specific protein transformer| Length = 184 Score = 33.5 bits (75), Expect = 0.27 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 304 RGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 R Q R R R+ Q T R+ S + +DRG H RHR Sbjct: 52 REQDRIRSLRQRAHQSTRRTRSRSRSQSSDRGSRHRRHR 90
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 33.1 bits (74), Expect = 0.35 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -1 Query: 328 APGSLQRSRGQPRARRCPNRSRQGTHRS---SSSGAPRKADRGRAHGRH 191 APGS QRSR R+ +RSR G+ S S SG+PR A G A RH Sbjct: 30 APGS-QRSR---RSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRH 74
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 33.1 bits (74), Expect = 0.35 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +1 Query: 118 GEARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 294 G A +R T + VS+ PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 295 ADPETFAKNRELEVIHCR 348 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.7 bits (73), Expect = 0.45 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 342 VSS PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 343 --CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 429 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 32.3 bits (72), Expect = 0.59 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 2/104 (1%) Frame = +2 Query: 113 SLVRPASLCGRPLQRPSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGS 292 S P+S G P P H + T PTV S+ SP + +L +T TP + Sbjct: 3678 STATPSSTQGPPAGTP---HVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTAT 3734 Query: 293 RLTPRPLQRTGS--LR*STAGGPCSVRSDASSPSFLRAMESSSV 418 T P G+ R S P + S A+ S + +S+V Sbjct: 3735 SFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTV 3778 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +2 Query: 188 TVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--LR*STAGGPCS 361 T PTV S+ SP + +L +T TP + +TP P G+ R S P + Sbjct: 2473 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTA 2532 Query: 362 VRSDASSPSFLRAMESSSV 418 S A+ S +S+V Sbjct: 2533 TMSTATPSSTPETAHTSTV 2551
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 32.0 bits (71), Expect = 0.78 Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 12/124 (9%) Frame = -3 Query: 440 PALNHTASPNLTPLRARSSGKTHPSAPSMAHLQWIT---------SSSRFFAKVSGSAES 288 P+L HT P +TP + + T PS P + Q T + ++ V +A++ Sbjct: 867 PSLQHTTPPGMTP--PQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQA 924 Query: 287 PAVSQP*SPGNSPVK*LGGSPESGPR*STRSAPYHGLPDETCLAFAAVF---RIVTRASP 117 QP +P P +P+S + + P H P T L+ AA R+ T +S Sbjct: 925 QVTPQPQTPVQPPSV---ATPQSSQQ---QPTPVHAQPPGTPLSQAAASIDNRVPTPSSV 978 Query: 116 KRAE 105 AE Sbjct: 979 ASAE 982
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 32.0 bits (71), Expect = 0.78 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 124 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 A +R T K + V+ PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 124 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 301 PETFAKNRELEVIHCR 348 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 124 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167 Query: 301 PETFAKNRELEVIHCR 348 A R++ H R Sbjct: 168 K---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 124 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 301 PETFAKNRELEVIHCR 348 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 31.6 bits (70), Expect = 1.0 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Frame = -1 Query: 391 EARGRRIR--------AHRAWP-TCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSS 239 E GRRIR AH P G P P +RSR + + R +RSR+ SS Sbjct: 170 EVDGRRIRVDYSITQRAHTPTPGVYMGRPSRPLG-RRSRERDYSTRDTSRSRRRHRDESS 228 Query: 238 SGAPRKADRGRAHGRHR 188 S +P ++R + RHR Sbjct: 229 SVSPYDSNRRKYRSRHR 245
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 31.2 bits (69), Expect = 1.3 Identities = 28/97 (28%), Positives = 34/97 (35%) Frame = +2 Query: 158 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR* 337 P A T PT + R AT S ATT P TPRP+ R Sbjct: 408 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSSATTTRRPTKKPRTPRPVPRV----- 462 Query: 338 STAGGPCSVRSDASSPSFLRAMESSSVRLYGSRQAPK 448 T P + AS P+ +R S R Q P+ Sbjct: 463 -TTKAPITRLETASPPTRIRTTTSGVPRGGEPNQRPE 498
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 127 RVTMRKTAAKA-KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 273 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 342 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 343 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 429 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 124 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 300 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 301 PETFAKNRELEVIHCR 348 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 342 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 343 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 429 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>CS029_HUMAN (Q8WUQ7) Protein C19orf29 (NY-REN-24 antigen)| Length = 690 Score = 31.2 bits (69), Expect = 1.3 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -1 Query: 355 WPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRA 203 W + GS Q+ ++SRGQ RR RS + +SSS +P ++ RA Sbjct: 11 WHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRA 61
>LAD1_MOUSE (P57016) Ladinin 1 (Lad-1) (Linear IgA disease autoantigen)| Length = 528 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADR 212 S PQ G Q + +PR R P++S + S+ P KA R Sbjct: 303 SEQPQTTGGSQATTREPRGRALPDKSPPSSAEQSTPAPPTKASR 346
>BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12| Length = 1151 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -1 Query: 352 PTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 P+ +P +PG+ S G+ + R P+R G H SS AP RAH R Sbjct: 638 PSSCLTPVSPGT---SDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRR 689
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -1 Query: 319 SLQRSRGQPRARRCPNRSRQGTH-RSSSSGAPRKADRGRAHGRHRTMGCP 173 S RSRG+ R +RSR+ RS SS R R R+ R RT+ P Sbjct: 430 SRDRSRGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGNRDRTVQSP 479
>PININ_PONPY (Q5R5X0) Pinin| Length = 719 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -1 Query: 343 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 594 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 646
>RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING finger protein)| Length = 352 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Frame = -1 Query: 346 CSGSPQAPGSLQRSRGQP-RARRCPNRSRQGTHRSS-----SSGAPRK-ADRGRAHGRHR 188 C GSP APGS + + P + CP RS + R + S G K A+ G GR R Sbjct: 47 CWGSPAAPGSEEATPSCPCCGQPCPRRSLRSNVRLAVEVRISRGLREKLAEPGARTGRRR 106 Query: 187 -----TMGC 176 TMGC Sbjct: 107 GGRIPTMGC 115
>PININ_HUMAN (Q9H307) Pinin (140 kDa nuclear and cell adhesion-related| phosphoprotein) (Domain-rich serine protein) (DRS-protein) (DRSP) (Melanoma metastasis clone A protein) (Desmosome-associated protein) (SR-like protein) (Nuclear protein SDK3) Length = 717 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -1 Query: 343 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 592 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 644
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -1 Query: 343 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 600 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 652
>ARNT_MOUSE (P53762) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 791 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 104 PQLSLVRPASLCGRPLQRPSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATT 271 P +++V+P+S G+ L + S+ A G+ PT STS PG P + A T Sbjct: 609 PPVTIVQPSSSAGQILAQISRHSNPAQGSAPTWTSTS--RPGFAAQQVPTQATAKT 662
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = -1 Query: 388 ARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRG 209 ARGR + R+ G Q S RSR + R+ R P + + R + +P + G Sbjct: 146 ARGRSRPSPRSSRDARGRQQRAQSSSRSRSRSRS-RSPTKGPHSSGRDTRLPSPGRPPGG 204 Query: 208 RAHGRHRTMGCP 173 R G CP Sbjct: 205 RRRGTPERERCP 216
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 79 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 186 G++VK + ++S + G R+TMRK A AK S SPW Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>TIMD2_RAT (Q5FVR0) T-cell immunoglobulin and mucin domain-containing protein| 2 precursor (TIMD-2) (T-cell membrane protein 2) (TIM-2) Length = 349 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = -1 Query: 334 PQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMGCPMKLAWP 155 P +P + + G+P R N R T R +++G P +R GR T P P Sbjct: 129 PTSPPTRPTNTGRPTTTRPTNTGRPTTTRPTNTGRPTTTERPTTTGRPTTTERPTTTGRP 188
>VE2_HPV38 (Q80910) Regulatory protein E2| Length = 441 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -1 Query: 340 GSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHG 197 G + G+ +R + + R+R NR + T RSSS G+ RGR G Sbjct: 254 GQRETTGTQRRRKSRSRSRST-NRGGRDTRRSSSRGSSVSPTRGRRRG 300
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/69 (26%), Positives = 28/69 (40%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 345 +S PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 346 RWAMLGALG 372 +A + G Sbjct: 221 LYAGIDFAG 229
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 30.0 bits (66), Expect = 2.9 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Frame = +1 Query: 139 RKTAAK---AKQVSSGSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 306 R AAK + +V+S PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKS 166 Query: 307 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 453 + C +A + G + + + G +V AG Q++ Sbjct: 167 FGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVW 215
>KIN25_CAEEL (Q10925) Probable tyrosine-protein kinase kin-25 (EC 2.7.10.2)| Length = 1237 Score = 30.0 bits (66), Expect = 2.9 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 13/123 (10%) Frame = +2 Query: 104 PQLSLVRPASLCGRPLQRPSKFHRAAHGTV-PTV---CSTSVRFPGSPRAT*PVSS---- 259 PQ + P++ P+Q+P + H V PT S R P P+ + PVS+ Sbjct: 828 PQQVRIPPSTA---PVQKPVQVSAPTHSNVAPTTSSQASADARNPLPPKTSPPVSNTPIT 884 Query: 260 -----LATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVRSDASSPSFLRAMESSSVRL 424 A T P S +T RP T + S + D SS A+ + S L Sbjct: 885 VAPVHAAPTTSAPSTSVVTRRPTSTTAQM--SDEERRSRIAMDISS-----ALPAPSALL 937 Query: 425 YGS 433 YGS Sbjct: 938 YGS 940
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 29.6 bits (65), Expect = 3.8 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = +2 Query: 188 TVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGS----RLTPRPLQRTGSLR*STAGGP 355 T +V ++S + G AT ++T GT PGS + RP+ G STAGG Sbjct: 194 TKVSVAASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGA 253 Query: 356 CSVRSDASSP 385 S+ ++ P Sbjct: 254 PSIPPISTMP 263
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -1 Query: 310 RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 185 RS+G+ R R R+G S+ S P RGR GR T Sbjct: 280 RSKGRTETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGPT 321
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Frame = -1 Query: 370 RAHRAW----PTCSGSPQAPGSLQRSRGQPRARRCPNRSR---QGTHRSSSSGAPRKADR 212 R+ AW P C P+ P + +R A CP SR + ++GA + R Sbjct: 139 RSSPAWEPRSPRCPSGPEPPEDPRGARSSQGAA-CPLMSRPEGKAGDGCGTAGAHKGPPR 197 Query: 211 GRAHGRHRTMGCPMKLAWP 155 G + R CP AWP Sbjct: 198 GLSPSRQPLPLCPGAHAWP 216
>HXA10_HETFR (Q9IA27) Homeobox protein Hox-A10| Length = 271 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 275 GTPPGSRLTPRPLQRTGSLR*STAGGPC-SVRSDASSPSFLRAMESSSVRLYGSRQAPKS 451 GTPP S TP L R GS S C S R +A + + ESS V ++ +P+ Sbjct: 118 GTPPSSASTPTELGRKGSEGTSPGHLTCSSEREEAEAAASSANEESSPVPSESNKNSPEK 177 Query: 452 SAR 460 + Sbjct: 178 ETK 180
>RECF_HAHCH (Q2SQZ4) DNA replication and repair protein recF| Length = 375 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -2 Query: 387 LGEDASERTEHGPPAVDHLKLPVLCKGLGVSREPGGVPTV-VARELTGQVAR 235 LG AS RT+ AV HL ++C G V+ + G + V+R+ TG++ R Sbjct: 46 LGRGASFRTKELDYAVSHLSDEMVCFGEAVNEDAGKSFRIGVSRQKTGKLTR 97
>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)| Length = 749 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 313 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 +RSR + R+R C R R H+ S R R+ R R Sbjct: 695 KRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDR 736
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = -1 Query: 400 CAQEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRK 221 C + +R RR R+ + S + S RSRG+ P RSR + R S S + R+ Sbjct: 119 CHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRR 178 Query: 220 ADRGRAHG 197 + G G Sbjct: 179 SRSGSIKG 186 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 Query: 337 SPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKA 218 SP S RS +PR+ R +RS S SG+PR++ Sbjct: 192 SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRS 231
>ABFA_STRLI (P53627) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)| (ABF) (Alpha-L-AF) Length = 662 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Frame = -1 Query: 406 LHCAQEARGRRIRAHRAWPTCSGSPQA--PGSLQRSRGQPRARRCPNRSRQGTHRSSSSG 233 + CA A G+ R +G+P A P S R P ARR P+R T R+ Sbjct: 498 IRCADPAPGQPPRRPGEGTGFTGTPPAAPPSSSSAPRPDPTARRSPDR----TARARVLA 553 Query: 232 APRKADRGRAHGRHRTMGCPMK 167 A R R GR + G P++ Sbjct: 554 AARV--RRMPFGRTKVCGAPVR 573
>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich| protein 1) Length = 254 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/108 (24%), Positives = 42/108 (38%) Frame = -3 Query: 440 PALNHTASPNLTPLRARSSGKTHPSAPSMAHLQWITSSSRFFAKVSGSAESPAVSQP*SP 261 P + P L L +S PS+ + SSS + S+ S A S +P Sbjct: 96 PWYSSRLEPALKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAP 155 Query: 260 GNSPVK*LGGSPESGPR*STRSAPYHGLPDETCLAFAAVFRIVTRASP 117 +S K +P S S+ +AP + A ++ +T A+P Sbjct: 156 SSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAPSSTEAKITSAAP 203
>PININ_BOVIN (P79122) Pinin| Length = 703 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 188 SGS + GS + + SR + ++SS R RGR H R R Sbjct: 605 SGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDR 656
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 345 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 124 VSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 180 Query: 346 R 348 R Sbjct: 181 R 181
>DAG1_CANFA (Q9TSZ6) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 892 Score = 29.6 bits (65), Expect = 3.8 Identities = 27/97 (27%), Positives = 33/97 (34%) Frame = +2 Query: 158 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR* 337 P A T PT + R AT S TT P TPRP+ R Sbjct: 405 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSSTTTTRRPTKKPRTPRPVPRV----- 459 Query: 338 STAGGPCSVRSDASSPSFLRAMESSSVRLYGSRQAPK 448 T P + AS P+ +R S R Q P+ Sbjct: 460 -TTKAPITRLETASPPTRIRTTTSGVPRGGEPNQRPE 495
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 29.6 bits (65), Expect = 3.8 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = -1 Query: 397 AQEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKA 218 ++ R R R+ R+ + S S S RSR + R+R +RS+ RS S P K+ Sbjct: 198 SRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSR---SRSKGRKSRSKSKSKP-KS 253 Query: 217 DRG-RAHGRHRT 185 DRG +H R R+ Sbjct: 254 DRGSHSHSRSRS 265
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 5.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 304 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 414 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 5.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 304 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 414 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>SFRS7_MOUSE (Q8BL97) Splicing factor, arginine/serine-rich 7| Length = 267 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = -1 Query: 400 CAQEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRK 221 C + +R RR R+ + S + S RSRG+ P RSR + R S S + R+ Sbjct: 148 CHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRR 207 Query: 220 ADRGRAHG 197 + G G Sbjct: 208 SRSGSIIG 215
>TIM50_EMENI (Q5B4P0) Import inner membrane translocase subunit tim50,| mitochondrial precursor Length = 532 Score = 29.3 bits (64), Expect = 5.0 Identities = 30/119 (25%), Positives = 45/119 (37%) Frame = -3 Query: 419 SPNLTPLRARSSGKTHPSAPSMAHLQWITSSSRFFAKVSGSAESPAVSQP*SPGNSPVK* 240 +P P +SS P+ PS ++ A+ AE S P + + Sbjct: 40 TPYKLPESVKSSKPEQPAKPSQ--------QEQYAAE---QAEFETTSDPQANTANTTSQ 88 Query: 239 LGGSPESGPR*STRSAPYHGLPDETCLAFAAVFRIVTRASPKRAEEATFFTDLPAKAEE 63 SPES P S + AP LPD T + + + S K T+ P++ EE Sbjct: 89 ASSSPESSPSQSEQDAPQRPLPDLTQGIPSTLAAELEARSKKSGSGTLNLTEDPSRFEE 147
>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1| (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) Length = 618 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -3 Query: 443 EPALNHTASPNLTPLRARSSGKTHPSAPSMAHLQWITSSSRFFAKVSGS 297 EP L+H A + P++ S+ SAP + L+ I SS FF V + Sbjct: 230 EPPLDHLAGSHHEPMKRNSNPAQFSSAPKKSRLK-IGESSAFFTYVKST 277
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +2 Query: 224 PGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVRSDASSP 385 PG+P T P +S ++ G PG PR L R+ SL GG A+ P Sbjct: 342 PGTPGTTPPAAS--SSRGGEPGPGPLPRSLSRSNSLPHPAGGGKAGGPGVAAEP 393
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.3 bits (64), Expect = 5.0 Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Frame = +1 Query: 130 VTMRKTAAKAKQVSSGSPWYG--ADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 303 V+ KT + K V S S A+ YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASAESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAATA 83 Query: 304 ET--FAKNRELEVIHCRWAMLGALGCVFPELL 393 + RE E+ H R AML ALG V E L Sbjct: 84 TVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>ULK2_HUMAN (Q8IYT8) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) Length = 1036 Score = 29.3 bits (64), Expect = 5.0 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -3 Query: 305 SGSAESPAVSQP*SPGNSPVK*LGGSPES 219 +G + SP S+P S G SP K LG SP S Sbjct: 557 AGYSYSPQPSRPGSLGTSPTKHLGSSPRS 585
>VE2_HPV17 (P36785) Regulatory protein E2| Length = 452 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/74 (25%), Positives = 29/74 (39%) Frame = -1 Query: 394 QEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKAD 215 Q RR R + PT + + ++RSR R R+ +R + R R + Sbjct: 237 QRTSPRRYRRKASSPTATTTRHKRQDIRRSRSTSRGRQAISRGGERRQRRRERSYSRDSS 296 Query: 214 RGRAHGRHRTMGCP 173 R GR + G P Sbjct: 297 RSPNRGRGGSSGGP 310
>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22| Length = 954 Score = 29.3 bits (64), Expect = 5.0 Identities = 22/68 (32%), Positives = 33/68 (48%) Frame = -1 Query: 397 AQEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKA 218 +++ RGRR R ++PGS R R +PR+R +RSR R + PR Sbjct: 795 SEDDRGRR-RRRGVGSRRRSLTRSPGSRSRPRSRPRSR---SRSR-SLSRDRTGSPPRGR 849 Query: 217 DRGRAHGR 194 R R++ R Sbjct: 850 RRSRSYSR 857
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 28.9 bits (63), Expect = 6.6 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Frame = +2 Query: 158 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--- 328 P A T PT + R AT S TT P TPRP+ R + Sbjct: 408 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRTPRPVPRVTTKVS 467 Query: 329 -LR*STAGGPCSVRSDAS 379 R TA P +R+ S Sbjct: 468 ITRLETASPPTRIRTTTS 485
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 367 AHRAWPTCSGSPQAPGSLQRSRGQPRARRCP-NRSRQGTHRSSSSGAPRK 221 +H A +P PG ++R RG+PR +R P + G PRK Sbjct: 1772 SHTAPAVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRK 1821
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 233 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 2530 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 2565 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 233 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 2060 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 2095 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 233 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 1590 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 1625 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -1 Query: 343 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 233 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 1120 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 1155
>NLTP4_ARATH (Q9LLR6) Nonspecific lipid-transfer protein 4 precursor (LTP 4)| Length = 112 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -1 Query: 352 PTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRK 221 P C+G + G Q + + +A RC + +G + S +SG P K Sbjct: 50 PCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGVNPSLASGLPGK 93
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/85 (25%), Positives = 43/85 (50%) Frame = -3 Query: 437 ALNHTASPNLTPLRARSSGKTHPSAPSMAHLQWITSSSRFFAKVSGSAESPAVSQP*SPG 258 +L + S +L P + SSG ++ S P Q ++S++ S S+ + + ++ SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 257 NSPVK*LGGSPESGPR*STRSAPYH 183 N+ + +GG+ S +T +A H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 313 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 179 +RSR + R RR +RSR RSSS G K R+ + +T G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDG 126
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 313 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 179 +RSR + R RR +RSR RSSS G K R+ + +T G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDG 126
>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3| Length = 944 Score = 28.9 bits (63), Expect = 6.6 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = -3 Query: 422 ASPNLTPLRARSSGKTHPSAPSMAHLQWITSS---SRFFAKVSGSAESPAVSQP*SPGNS 252 +SP LTP ++ PS S +Q +S+ + A S +SPA + P +P Sbjct: 805 SSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPTTRLAAAGRSVQSPASTPPPTP-TP 863 Query: 251 PVK*LGGSPESGPR*STRSAPYHGLPDETCLAFAAV 144 P G + P + RS G P E A + Sbjct: 864 PSAPSAGQTRAMPLAANRSTDAAGDPAEPTAALPII 899
>YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III| Length = 938 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 176 PDETCLAFAAVFRIVTRASPKRAEEATFFTDLPAK-AEERDMVVVAIALLRLEVCRVFS 3 P E F FRIV K EEA F P + E+ D+ + A L L++ R+F+ Sbjct: 108 PIEGGSLFVTNFRIVVILKDKEVEEALRFLVFPLQDIEQIDLAIPAFIHLSLKIGRMFT 166
>ASCL2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)| Length = 263 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -1 Query: 361 RAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGA--PRKADRGR 206 R PT SG A + +R + P RC R R G +SSS A R+ +R R Sbjct: 76 RLMPTSSGVAGACAA-RRRQASPELLRCSRRRRSGATEASSSSAAVARRNERER 128
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.9 bits (63), Expect = 6.6 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Frame = -1 Query: 397 AQEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAP--- 227 AQ ARG R R R G A G R PR R P R G + GAP Sbjct: 134 AQPARGGR-RGRRRGRGRGGPGAADGLSDPRRRAPRTNRNPGGPRPGAGWTDGPGAPHGE 192 Query: 226 --RKADRGRAHGRHRTMG 179 R +++ G RT G Sbjct: 193 AWRGSEQPDPPGGQRTRG 210
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = +2 Query: 236 RAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVRSDASSPSFL 394 + T P +SL + PP ++ +P P L T G P + SP+ + Sbjct: 392 QTTIPATSLFPAMSLPPQAQFSPYPAVAPSPLALQTRGAPIGMEISIGSPALV 444
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 440 PALNHTASPNLTPLRARSSGKTHPSAPSMA 351 P HT+SP+ T ++ S+ T SAPS A Sbjct: 65 PTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 127 RVTMRKTAAKAKQVSSGS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 273 R R AK +++ PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -1 Query: 313 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 179 +RSR + R RR +RSR RSSS G+ K R+ + + G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGSKTKKTENRSRSKEKAEG 126
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 11/99 (11%) Frame = +1 Query: 166 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 342 +++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 343 --CRWAMLGALGCVFPELLAR--------NGVKFGEAVW 429 C +A + G + A+ G++ G+ +W Sbjct: 210 RACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>PRM2_HUMAN (P04554) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| Basic nuclear protein HPI1; Basic nuclear protein HPI2; Basic nuclear protein HPS1; Basic nuclear protein HPS2; Sperm histone HP4 (Sperm protamine P4); Sperm histone HP2 (Sperm Length = 102 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = -1 Query: 337 SPQAPGSLQRSRGQP--RARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMGC 176 SP+ +R+ GQ R R C R HR R+ R H R GC Sbjct: 37 SPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGC 92
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 440 PALNHTASPNLTPLRARSSGKTHPSAPSMA 351 P HT+SP+ T ++ S+ T SAPS A Sbjct: 65 PTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>VE2_HPV49 (P36795) Regulatory protein E2| Length = 488 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = -1 Query: 376 RIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHG 197 R R R + S S +A S RSR R +R G+ +S +P++ RGR G Sbjct: 286 RTRTRRREASTSRSQKASRSRSRSRSTSRG----SRGSGGSVTTSRDSSPKRTRRGRGRG 341
>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)| Length = 1073 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +2 Query: 254 SSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGP 355 ++ A TVG PP R P+QRT S STA P Sbjct: 661 AAAAATVGGPPPVRRASLPVQRTVSPAGSTAQSP 694
>DAG1_MOUSE (Q62165) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 893 Score = 28.5 bits (62), Expect = 8.6 Identities = 25/87 (28%), Positives = 31/87 (35%) Frame = +2 Query: 188 TVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVR 367 T PT + R AT S TT P TPRP+ R T P + Sbjct: 416 TPPTTTTKKPRVSTPKPATPSTDSSTTTTRRPTKKPRTPRPVPRV------TTKAPITRL 469 Query: 368 SDASSPSFLRAMESSSVRLYGSRQAPK 448 AS P+ +R S R Q P+ Sbjct: 470 ETASPPTRIRTTTSGVPRGGEPNQRPE 496
>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25| Length = 444 Score = 28.5 bits (62), Expect = 8.6 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = -1 Query: 394 QEARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKAD 215 ++ RR R+ + S SP+ + R + R R P+R+R+ S S R D Sbjct: 218 RDRHSRRRRSDSRDRSRSRSPRRRSDSEEDRSKQRRRDSPDRTRRRDRDQSRSRGNRDRD 277 Query: 214 RGRAHGRHR 188 R+ RHR Sbjct: 278 DDRSR-RHR 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,774,825 Number of Sequences: 219361 Number of extensions: 1639445 Number of successful extensions: 6839 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 6252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6776 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
