ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4f20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476717.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
2dbj|AK122123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
3gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 64 5e-07
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
5dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
6ref|XM_477481.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
7dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
8dbj|AK105707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
11ref|XM_477483.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
12gb|AC108076.2| Homo sapiens BAC clone RP11-735L15 from 4, comple... 46 0.11
13dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
14dbj|AK058321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
15ref|XM_532065.2| PREDICTED: Canis familiaris similar to Transcri... 44 0.44
16gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, comple... 44 0.44
17emb|CR391992.5| Human DNA sequence from clone RP1-308E4 on chrom... 44 0.44
18emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on ch... 44 0.44
19gb|AC103594.3| Homo sapiens chromosome 1 clone RP11-289A2, compl... 44 0.44
20gb|AF258813.1|AF258813 Lycopersicon esculentum aldehyde oxidase ... 44 0.44
21gb|AC098852.2| Homo sapiens BAC clone RP11-123E11 from 4, comple... 44 0.44
22gb|AF258809.1|AF258809 Lycopersicon esculentum aldehyde oxidase ... 44 0.44
23dbj|AB238208.1| Brassica rapa BrAO1 mRNA for aldehyde oxidase, c... 44 0.44
24ref|XM_515081.1| PREDICTED: Pan troglodytes similar to smootheli... 42 1.8
25gb|BC034237.2| Homo sapiens smoothelin, transcript variant 2, mR... 42 1.8
26gb|BC010599.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:115... 42 1.8
27ref|NM_013870.1| Mus musculus smoothelin (Smtn), mRNA 42 1.8
28gb|BC069839.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:767... 42 1.8
29gb|BC069836.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:766... 42 1.8
30ref|NM_134269.1| Homo sapiens smoothelin (SMTN), transcript vari... 42 1.8
31ref|NM_006932.3| Homo sapiens smoothelin (SMTN), transcript vari... 42 1.8
32ref|NM_134270.1| Homo sapiens smoothelin (SMTN), transcript vari... 42 1.8
33gb|BC066192.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:766... 42 1.8
34gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, compl... 42 1.8
35emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chr... 42 1.8
36gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 42 1.8
37emb|AJ010306.2|HSA010306 Homo sapiens mRNA for smoothelin L1, la... 42 1.8
38emb|AJ010305.1|MMU010305 Mus musculus mRNA for smoothelin L1, la... 42 1.8
39gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosom... 42 1.8
40emb|CR859773.1| Pongo pygmaeus mRNA; cDNA DKFZp468D019 (from clo... 42 1.8
41dbj|AK128719.1| Homo sapiens cDNA FLJ46886 fis, clone UTERU30163... 42 1.8
42dbj|AK128627.1| Homo sapiens cDNA FLJ46786 fis, clone TRACH30288... 42 1.8
43dbj|AK096953.1| Homo sapiens cDNA FLJ39634 fis, clone SMINT20026... 42 1.8
44dbj|AK138898.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 1.8
45dbj|AK166385.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 42 1.8
46dbj|AK170516.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.8
47dbj|AK030932.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 1.8
48emb|BX537138.6| Zebrafish DNA sequence from clone DKEY-52L18 in ... 42 1.8
49gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4,... 42 1.8
50dbj|AK085412.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 1.8
51gb|AF258811.1|AF258811 Lycopersicon esculentum aldehyde oxidase ... 42 1.8
52gb|AF218830.1|AF218830 Mus musculus smoothelin (Smtn) gene, exon... 42 1.8
53gb|AF064238.3|AF064238 Homo sapiens smoothelin large isoform L2 ... 42 1.8
54gb|AF132449.2|AF132449 Mus musculus smoothelin gene, alternative... 42 1.8
55gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22,... 42 1.8
56gb|AF064236.1|AF064236 Mus musculus smoothelin large isoform L2 ... 42 1.8
57dbj|AB209643.1| Homo sapiens mRNA for smoothelin isoform b varia... 42 1.8
58emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chro... 42 1.8
59gb|CP000013.1| Borrelia garinii PBi, complete genome 40 6.9
60gb|AC169699.1| Rhesus Macaque BAC CH250-12P18 (Children's Hospi... 40 6.9
61ref|XM_416364.1| PREDICTED: Gallus gallus similar to dynamin-lik... 40 6.9
62emb|CR933443.1| Paramecium tetraurelia, Small GTPase rab, putati... 40 6.9
63emb|AJ849532.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
64emb|AJ849529.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
65emb|AJ849528.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
66emb|AJ849520.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
67emb|AJ849519.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
68emb|AJ849518.1| Saccharomyces cerevisiae relic-DUP240-XIII gene ... 40 6.9
69ref|XM_761347.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.9
70emb|Z49703.1|SC9796 S.cerevisiae chromosome XIII cosmid 9796 40 6.9
71gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromo... 40 6.9
72emb|CR390128.1| Gallus gallus finished cDNA, clone ChEST160f13 40 6.9
73emb|AL114145.1|CNS01BEX Botrytis cinerea strain T4 cDNA library 40 6.9
74emb|AL112558.1|CNS01A6U Botrytis cinerea strain T4 cDNA library 40 6.9
75dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
76gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Canc... 40 6.9
77gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complet... 40 6.9
78gb|AE000783.1| Borrelia burgdorferi B31, complete genome 40 6.9
79emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, ... 40 6.9
80dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
81emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on ch... 40 6.9
82emb|CR792426.18| Zebrafish DNA sequence from clone DKEY-23A11 in... 40 6.9
83emb|AL357172.3|CNS05TDW Human chromosome 14 DNA sequence BAC R-7... 40 6.9
84emb|AL832718.1|HSM804029 Homo sapiens mRNA; cDNA DKFZp313C149 (f... 40 6.9
85gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, comple... 40 6.9
86gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complet... 40 6.9
87emb|AL929147.7| Mouse DNA sequence from clone RP23-429P18 on chr... 40 6.9
88gb|U24736.1|HIV1U24736 Human immunodeficiency virus type 1 envel... 40 6.9
89gb|U04527.1|BBU04527 Borrelia burgdorferi 212 DNA gyrase b subun... 40 6.9 
>ref|XM_476717.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4245

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 352  agtggcgacagcctgtgcacttgcagcatttaagttgcgtcgtcctgttcgaatgtatct 411
            |||||| ||||| ||||||||| |||||||||||||||  |||||||| ||||| |||||
Sbjct: 2685 agtggcaacagcttgtgcactttcagcatttaagttgcagcgtcctgtccgaatatatct 2744

                 
Query: 412  ggatc 416
             ||||
Sbjct: 2745 tgatc 2749



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                        
Query: 417  atcttcgccttctttctttgagttggaagttccagcaatcatgcctgtggtgaaggagtt 476
            |||||| ||| | ||||||||  | |||||||| || ||||||||   |||||||||| |
Sbjct: 4134 atcttcacctcccttctttgatcttgaagttcctgccatcatgcccacggtgaaggagct 4193

                                             
Query: 477  gtgtggcttggacaatgtggagaagtatttgga 509
             || ||||| ||||| |||||||||||||||||
Sbjct: 4194 atgcggcttagacaacgtggagaagtatttgga 4226



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 1    gttggtggtggcttcggaggaaaagctgttagatc 35
            |||||||||||||| ||||| |||||||| |||||
Sbjct: 2644 gttggtggtggctttggaggcaaagctgtcagatc 2678
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>dbj|AK122123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131J21, full
           insert sequence
          Length = 2663

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 352 agtggcgacagcctgtgcacttgcagcatttaagttgcgtcgtcctgttcgaatgtatct 411
           |||||| ||||| ||||||||| |||||||||||||||  |||||||| ||||| |||||
Sbjct: 547 agtggcaacagcttgtgcactttcagcatttaagttgcagcgtcctgtccgaatatatct 606

                
Query: 412 ggatc 416
            ||||
Sbjct: 607 tgatc 611



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                        
Query: 417  atcttcgccttctttctttgagttggaagttccagcaatcatgcctgtggtgaaggagtt 476
            |||||| ||| | ||||||||  | |||||||| || ||||||||   |||||||||| |
Sbjct: 2274 atcttcacctcccttctttgatcttgaagttcctgccatcatgcccacggtgaaggagct 2333

                                             
Query: 477  gtgtggcttggacaatgtggagaagtatttgga 509
             || ||||| ||||| |||||||||||||||||
Sbjct: 2334 atgcggcttagacaacgtggagaagtatttgga 2366



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 1   gttggtggtggcttcggaggaaaagctgttagatc 35
           |||||||||||||| ||||| |||||||| |||||
Sbjct: 506 gttggtggtggctttggaggcaaagctgtcagatc 540
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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 70/80 (87%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                          
Query: 227    ccattttctta-tgacatacttcatatgaagttttcaagtgctacatataggaggaggca 285
              ||||||||||| |||||  |||||| ||||| |||||||| |||||||||||||||| ||
Sbjct: 107495 ccattttcttaatgacagtcttcatgtgaaggtttcaagtactacatataggaggagcca 107436

                                  
Query: 286    ggggtgg-tgcagtcttgct 304
              || |||| |||| |||||||
Sbjct: 107435 ggagtggctgcaatcttgct 107416
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                           
Query: 353     gtggcgacagcctgtgcacttgcagcatttaagttgcgtcgtcctgttcgaatgtatctg 412
               ||||| ||||| ||||||||| |||||||||||||||  |||||||| ||||| ||||| 
Sbjct: 3506891 gtggcaacagcttgtgcactttcagcatttaagttgcagcgtcctgtccgaatatatctt 3506832

                   
Query: 413     gatc 416
               ||||
Sbjct: 3506831 gatc 3506828



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                           
Query: 417     atcttcgccttctttctttgagttggaagttccagcaatcatgcctgtggtgaaggagtt 476
               |||||| ||| | ||||||||  | |||||||| || ||||||||   |||||||||| |
Sbjct: 3504375 atcttcacctcccttctttgatcttgaagttcctgccatcatgcccacggtgaaggagct 3504316

                                                
Query: 477     gtgtggcttggacaatgtggagaagtatttgga 509
                || ||||| ||||| |||||||||||||||||
Sbjct: 3504315 atgcggcttagacaacgtggagaagtatttgga 3504283



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 463      gtggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
                |||||||||||  ||||||||||||| | |||||||||||| ||||||
Sbjct: 10769772 gtggtgaaggaactgtgtggcttggatattgtggagaagtacttggaa 10769819



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 464      tggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
                ||||||||||  |||| |||||||| | |||||||||||| ||||||
Sbjct: 10798874 tggtgaaggaactgtgcggcttggatattgtggagaagtacttggaa 10798920



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 1       gttggtggtggcttcggaggaaaagctgttagatc 35
               |||||||||||||| ||||| |||||||| |||||
Sbjct: 3507308 gttggtggtggctttggaggcaaagctgtcagatc 3507274
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>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 353   gtggcgacagcctgtgcacttgcagcatttaagttgcgtcgtcctgttcgaatgtatctg 412
             ||||| ||||| ||||||||| |||||||||||||||  |||||||| ||||| ||||| 
Sbjct: 44841 gtggcaacagcttgtgcactttcagcatttaagttgcagcgtcctgtccgaatatatctt 44782

                 
Query: 413   gatc 416
             ||||
Sbjct: 44781 gatc 44778



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                         
Query: 417   atcttcgccttctttctttgagttggaagttccagcaatcatgcctgtggtgaaggagtt 476
             |||||| ||| | ||||||||  | |||||||| || ||||||||   |||||||||| |
Sbjct: 42325 atcttcacctcccttctttgatcttgaagttcctgccatcatgcccacggtgaaggagct 42266

                                              
Query: 477   gtgtggcttggacaatgtggagaagtatttgga 509
              || ||||| ||||| |||||||||||||||||
Sbjct: 42265 atgcggcttagacaacgtggagaagtatttgga 42233



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 1     gttggtggtggcttcggaggaaaagctgttagatc 35
             |||||||||||||| ||||| |||||||| |||||
Sbjct: 45258 gttggtggtggctttggaggcaaagctgtcagatc 45224
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>ref|XM_477481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4029

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 463  gtggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
            |||||||||||  ||||||||||||| | |||||||||||| ||||||
Sbjct: 3946 gtggtgaaggaactgtgtggcttggatattgtggagaagtacttggaa 3993
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>dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0557D09
          Length = 135315

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 463   gtggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
             |||||||||||  ||||||||||||| | |||||||||||| ||||||
Sbjct: 99218 gtggtgaaggaactgtgtggcttggatattgtggagaagtacttggaa 99265



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 464    tggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
              ||||||||||  |||| |||||||| | |||||||||||| ||||||
Sbjct: 128320 tggtgaaggaactgtgcggcttggatattgtggagaagtacttggaa 128366
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>dbj|AK105707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E04, full
            insert sequence
          Length = 1472

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 463  gtggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
            |||||||||||  ||||||||||||| | |||||||||||| ||||||
Sbjct: 1068 gtggtgaaggaactgtgtggcttggatattgtggagaagtacttggaa 1115
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 79    caaataagaagatagaacatctgt 102
             ||||||||||||||||||||||||
Sbjct: 59432 caaataagaagatagaacatctgt 59455



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    ataagaagatagaacatctgt 102
             |||||||||||||||||||||
Sbjct: 59395 ataagaagatagaacatctgt 59415
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 79      caaataagaagatagaacatctgt 102
               ||||||||||||||||||||||||
Sbjct: 1397770 caaataagaagatagaacatctgt 1397793



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 82      ataagaagatagaacatctgt 102
               |||||||||||||||||||||
Sbjct: 1397733 ataagaagatagaacatctgt 1397753
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>ref|XM_477483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 464 tggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
           ||||||||||  |||| |||||||| | |||||||||||| ||||||
Sbjct: 776 tggtgaaggaactgtgcggcttggatattgtggagaagtacttggaa 822
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>gb|AC108076.2| Homo sapiens BAC clone RP11-735L15 from 4, complete sequence
          Length = 81891

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 309   aagtgctaaaaacttgaagaacatact 335
             |||||||||||| ||||||||||||||
Sbjct: 37763 aagtgctaaaaatttgaagaacatact 37789
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>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0018O23
          Length = 142143

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 464  tggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
            ||||||||||  |||| |||||||| | |||||||||||| ||||||
Sbjct: 9633 tggtgaaggaactgtgcggcttggatattgtggagaagtacttggaa 9679
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>dbj|AK058321.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B01, full
           insert sequence
          Length = 1187

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 464 tggtgaaggagttgtgtggcttggacaatgtggagaagtatttggaa 510
           ||||||||||  |||| |||||||| | |||||||||||| ||||||
Sbjct: 776 tggtgaaggaactgtgcggcttggatattgtggagaagtacttggaa 822
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>ref|XM_532065.2| PREDICTED: Canis familiaris similar to Transcription factor 19
           (Transcription factor SC1) (LOC474835), mRNA
          Length = 1823

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 273 ataggaggaggcaggggtggtg 294
           ||||||||||||||||||||||
Sbjct: 816 ataggaggaggcaggggtggtg 837
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>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence
          Length = 164194

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 227    ccattttcttatgacatacttc 248
              ||||||||||||||||||||||
Sbjct: 160574 ccattttcttatgacatacttc 160595
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>emb|CR391992.5| Human DNA sequence from clone RP1-308E4 on chromosome 1 Contains a
             novel gene (FLJ13171) and a DnaJ (Hsp40) homolog subfamily
             C member 8 (DNAJC8) pseudogene, complete sequence
          Length = 32906

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 426   ttctttctttgagttggaagtt 447
             ||||||||||||||||||||||
Sbjct: 15084 ttctttctttgagttggaagtt 15105
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>emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on chromosome 1 Contains part
              of a novel gene and a novel gene, complete sequence
          Length = 136856

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 334    ctcatttaaacattgttaagtg 355
              ||||||||||||||||||||||
Sbjct: 129891 ctcatttaaacattgttaagtg 129870
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>gb|AC103594.3| Homo sapiens chromosome 1 clone RP11-289A2, complete sequence
          Length = 51254

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 334  ctcatttaaacattgttaagtg 355
            ||||||||||||||||||||||
Sbjct: 1710 ctcatttaaacattgttaagtg 1689
to top
>gb|AF258813.1|AF258813 Lycopersicon esculentum aldehyde oxidase TAO2 gene, complete cds
          Length = 9775

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 359  acagcctgtgcacttgcagcat 380
            ||||||||||||||||||||||
Sbjct: 5568 acagcctgtgcacttgcagcat 5589
to top
>gb|AC098852.2| Homo sapiens BAC clone RP11-123E11 from 4, complete sequence
          Length = 193927

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 67     tatcctcacacccaaataagaa 88
              ||||||||||||||||||||||
Sbjct: 145205 tatcctcacacccaaataagaa 145184
to top
>gb|AF258809.1|AF258809 Lycopersicon esculentum aldehyde oxidase (AO2) mRNA, complete cds
          Length = 4631

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 359  acagcctgtgcacttgcagcat 380
            ||||||||||||||||||||||
Sbjct: 2871 acagcctgtgcacttgcagcat 2892
to top
>dbj|AB238208.1| Brassica rapa BrAO1 mRNA for aldehyde oxidase, complete cds
          Length = 4378

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 445  gttccagcaatcatgcctgtggtgaaggagttgtgtgg 482
            ||||||||||  |||||||| ||||||||||| |||||
Sbjct: 4116 gttccagcaacaatgcctgttgtgaaggagttttgtgg 4153
to top
>ref|XM_515081.1| PREDICTED: Pan troglodytes similar to smoothelin isoform c
           (LOC458765), mRNA
          Length = 1893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 aggaggaggcaggggtggtgc 295
           |||||||||||||||||||||
Sbjct: 829 aggaggaggcaggggtggtgc 809
to top
>gb|BC034237.2| Homo sapiens smoothelin, transcript variant 2, mRNA (cDNA clone
            MGC:9460 IMAGE:3912887), complete cds
          Length = 3300

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1341 aggaggaggcaggggtggtgc 1321
to top
>gb|BC010599.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:11581 IMAGE:3709078),
            complete cds
          Length = 3285

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1314 aggaggaggcaggggtggtgc 1294
to top
>ref|NM_013870.1| Mus musculus smoothelin (Smtn), mRNA
          Length = 3307

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1320 aggaggaggcaggggtggtgc 1300
to top
>gb|BC069839.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:76727 IMAGE:30431675),
            complete cds
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1302 aggaggaggcaggggtggtgc 1282
to top
>gb|BC069836.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:76604 IMAGE:30456568),
            complete cds
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1302 aggaggaggcaggggtggtgc 1282
to top
>ref|NM_134269.1| Homo sapiens smoothelin (SMTN), transcript variant 2, mRNA
          Length = 3294

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>ref|NM_006932.3| Homo sapiens smoothelin (SMTN), transcript variant 3, mRNA
          Length = 3129

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>ref|NM_134270.1| Homo sapiens smoothelin (SMTN), transcript variant 1, mRNA
          Length = 3198

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>gb|BC066192.1| Mus musculus smoothelin, mRNA (cDNA clone MGC:76672 IMAGE:30433616),
            complete cds
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1302 aggaggaggcaggggtggtgc 1282
to top
>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 211  attccttctgatctagccattttct 235
            |||||||||| ||||||||||||||
Sbjct: 3502 attccttctgttctagccattttct 3478
to top
>emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chromosome 9 Contains the
             5' end of the gene for coiled-coil protein (BICD2)
             (KIAA0699), a novel gene, a eukaryotic translation
             elongation factor 1 delta (guanine nucleotide exchange
             protein) (EEF1D) pseudogene, the gene for a novel KRAB
             box-containing C2H2 type zinc finger protein, a novel
             gene, a pseudogene similar to part of sorting nexin
             associated golgi protein 1 (SNAG1), a novel pseudogene, a
             melanoma antigen pseudogene and three CpG islands,
             complete sequence
          Length = 182280

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    gccgtgatcctgaagttttga 65
             |||||||||||||||||||||
Sbjct: 10148 gccgtgatcctgaagttttga 10128
to top
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1       gttggtggtggcttcggagga 21
               |||||||||||||||||||||
Sbjct: 1419239 gttggtggtggcttcggagga 1419259
to top
>emb|AJ010306.2|HSA010306 Homo sapiens mRNA for smoothelin L1, large isoform
          Length = 3152

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>emb|AJ010305.1|MMU010305 Mus musculus mRNA for smoothelin L1, large isoform
          Length = 3142

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1320 aggaggaggcaggggtggtgc 1300
to top
>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete
             sequence
          Length = 170988

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 211   attccttctgatctagccattttct 235
             |||||||||| ||||||||||||||
Sbjct: 57946 attccttctgttctagccattttct 57922
to top
>emb|CR859773.1| Pongo pygmaeus mRNA; cDNA DKFZp468D019 (from clone DKFZp468D019)
          Length = 3310

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>dbj|AK128719.1| Homo sapiens cDNA FLJ46886 fis, clone UTERU3016308, moderately
            similar to Smoothelin
          Length = 4493

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1219 aggaggaggcaggggtggtgc 1199
to top
>dbj|AK128627.1| Homo sapiens cDNA FLJ46786 fis, clone TRACH3028837, moderately
            similar to Smoothelin
          Length = 4954

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 2918 aggaggaggcaggggtggtgc 2898
to top
>dbj|AK096953.1| Homo sapiens cDNA FLJ39634 fis, clone SMINT2002689, highly similar to
            SMOOTHELIN
          Length = 3560

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1408 aggaggaggcaggggtggtgc 1388
to top
>dbj|AK138898.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430107E06 product:smoothelin, full insert
            sequence
          Length = 3397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1438 aggaggaggcaggggtggtgc 1418
to top
>dbj|AK166385.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length
            enriched library, clone:G930006M01 product:smoothelin,
            full insert sequence
          Length = 3400

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1441 aggaggaggcaggggtggtgc 1421
to top
>dbj|AK170516.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630106G12
            product:smoothelin, full insert sequence
          Length = 3291

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1333 aggaggaggcaggggtggtgc 1313
to top
>dbj|AK030932.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830462O20 product:smoothelin, full insert
            sequence
          Length = 3332

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1374 aggaggaggcaggggtggtgc 1354
to top
>emb|BX537138.6| Zebrafish DNA sequence from clone DKEY-52L18 in linkage group 15,
             complete sequence
          Length = 144274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 364   ctgtgcacttgcagcatttaagttg 388
             |||||||||| ||||||||||||||
Sbjct: 34751 ctgtgcactttcagcatttaagttg 34775
to top
>gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4, complete sequence
          Length = 194206

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   ctaaaagcatattgttatacc 177
             |||||||||||||||||||||
Sbjct: 46063 ctaaaagcatattgttatacc 46083
to top
>dbj|AK085412.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630023C05 product:smoothelin, full insert
            sequence
          Length = 3355

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1388 aggaggaggcaggggtggtgc 1368
to top
>gb|AF258811.1|AF258811 Lycopersicon esculentum aldehyde oxidase (AO4) pseudogene, mRNA
            sequence
          Length = 4273

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 360  cagcctgtgcacttgcagcat 380
            |||||||||||||||||||||
Sbjct: 2596 cagcctgtgcacttgcagcat 2616
to top
>gb|AF218830.1|AF218830 Mus musculus smoothelin (Smtn) gene, exons 9 and 10, alternatively
           spliced
          Length = 915

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 aggaggaggcaggggtggtgc 295
           |||||||||||||||||||||
Sbjct: 550 aggaggaggcaggggtggtgc 530
to top
>gb|AF064238.3|AF064238 Homo sapiens smoothelin large isoform L2 (SMTN) mRNA, complete cds
          Length = 3316

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1350 aggaggaggcaggggtggtgc 1330
to top
>gb|AF132449.2|AF132449 Mus musculus smoothelin gene, alternatively spliced, complete cds
          Length = 26927

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 275   aggaggaggcaggggtggtgc 295
             |||||||||||||||||||||
Sbjct: 12507 aggaggaggcaggggtggtgc 12487
to top
>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence
          Length = 133893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   aggaggaggcaggggtggtgc 295
             |||||||||||||||||||||
Sbjct: 86954 aggaggaggcaggggtggtgc 86974
to top
>gb|AF064236.1|AF064236 Mus musculus smoothelin large isoform L2 (SMsmo) mRNA, complete cds
          Length = 3307

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  aggaggaggcaggggtggtgc 295
            |||||||||||||||||||||
Sbjct: 1320 aggaggaggcaggggtggtgc 1300
to top
>dbj|AB209643.1| Homo sapiens mRNA for smoothelin isoform b variant protein
          Length = 5290

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 aggaggaggcaggggtggtgc 295
           |||||||||||||||||||||
Sbjct: 946 aggaggaggcaggggtggtgc 926
to top
>emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chromosome 11, complete
              sequence
          Length = 201123

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    aggaggaggcaggggtggtgc 295
              |||||||||||||||||||||
Sbjct: 183753 aggaggaggcaggggtggtgc 183773
to top
>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    gctgtaacagaactaaaagcatat 168
              ||||||||| ||||||||||||||
Sbjct: 459830 gctgtaacaaaactaaaagcatat 459853
to top
>gb|AC169699.1| Rhesus Macaque  BAC CH250-12P18 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 209387

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gaagccgaattgtctctttt 204
              ||||||||||||||||||||
Sbjct: 135816 gaagccgaattgtctctttt 135835
to top
>ref|XM_416364.1| PREDICTED: Gallus gallus similar to dynamin-like protein DYNIV-11
            (LOC418132), mRNA
          Length = 5078

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  aagttttcaagtgctacata 273
            ||||||||||||||||||||
Sbjct: 4295 aagttttcaagtgctacata 4314
to top
>emb|CR933443.1| Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   acccaaataagaagatagaa 95
            ||||||||||||||||||||
Sbjct: 1086 acccaaataagaagatagaa 1067
to top
>emb|AJ849532.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, haplotype Hal2, strain YIIc17
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1874 tgctgctaaagtgctaaaaa 1893
to top
>emb|AJ849529.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, haplotype Hal, strain YIIc12
          Length = 1975

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1875 tgctgctaaagtgctaaaaa 1894
to top
>emb|AJ849528.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, haplotype Hal2, strain CLIB630 (TL229)
          Length = 1975

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1875 tgctgctaaagtgctaaaaa 1894
to top
>emb|AJ849520.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, strain CLIB413
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1874 tgctgctaaagtgctaaaaa 1893
to top
>emb|AJ849519.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, strain CLIB410
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1874 tgctgctaaagtgctaaaaa 1893
to top
>emb|AJ849518.1| Saccharomyces cerevisiae relic-DUP240-XIII gene and tRNA-Val gene for
            transfer RNA-Val, strain CLIB388 (ATCC 10615)
          Length = 1975

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 1875 tgctgctaaagtgctaaaaa 1894
to top
>ref|XM_761347.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0919) partial mRNA
          Length = 3369

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ctaaaaacttgaagaacata 333
            ||||||||||||||||||||
Sbjct: 2659 ctaaaaacttgaagaacata 2640
to top
>emb|Z49703.1|SC9796 S.cerevisiae chromosome XIII cosmid 9796
          Length = 29421

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgctgctaaagtgctaaaaa 320
            ||||||||||||||||||||
Sbjct: 5504 tgctgctaaagtgctaaaaa 5523
to top
>gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromosome unknown, complete
             sequence
          Length = 216963

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gaagccgaattgtctctttt 204
             ||||||||||||||||||||
Sbjct: 80306 gaagccgaattgtctctttt 80325
to top
>emb|CR390128.1| Gallus gallus finished cDNA, clone ChEST160f13
          Length = 936

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 254 aagttttcaagtgctacata 273
           ||||||||||||||||||||
Sbjct: 843 aagttttcaagtgctacata 862
to top
>emb|AL114145.1|CNS01BEX Botrytis cinerea strain T4 cDNA library
          Length = 410

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gtatctggatcatcttcgcc 425
           ||||||||||||||||||||
Sbjct: 69  gtatctggatcatcttcgcc 50
to top
>emb|AL112558.1|CNS01A6U Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 gtatctggatcatcttcgcc 425
           ||||||||||||||||||||
Sbjct: 631 gtatctggatcatcttcgcc 612
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 449      cagcaatcatgcctgtggtg 468
                ||||||||||||||||||||
Sbjct: 13256457 cagcaatcatgcctgtggtg 13256438
to top
>gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128729

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgtggagaagtatttggaaa 511
             ||||||||||||||||||||
Sbjct: 26271 tgtggagaagtatttggaaa 26252
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>gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complete sequence
          Length = 158813

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   gaagccgaattgtctctttt 204
             ||||||||||||||||||||
Sbjct: 92497 gaagccgaattgtctctttt 92478
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    gctgtaacagaactaaaagcatat 168
              ||||||||| ||||||||||||||
Sbjct: 457623 gctgtaacaaaactaaaagcatat 457646
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>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence
          Length = 177531

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     agaagatagaacatctgtac 104
              ||||||||||||||||||||
Sbjct: 157491 agaagatagaacatctgtac 157510
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   cagcaatcatgcctgtggtg 468
             ||||||||||||||||||||
Sbjct: 77891 cagcaatcatgcctgtggtg 77872
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>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete
              sequence
          Length = 219412

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gggtggtgcagtcttgctgc 306
              ||||||||||||||||||||
Sbjct: 177808 gggtggtgcagtcttgctgc 177827
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>emb|CR792426.18| Zebrafish DNA sequence from clone DKEY-23A11 in linkage group 3, complete
              sequence
          Length = 210874

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ggcaggggtggtgcagtctt 301
              ||||||||||||||||||||
Sbjct: 137589 ggcaggggtggtgcagtctt 137608
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>emb|AL357172.3|CNS05TDW Human chromosome 14 DNA sequence BAC R-789A21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 198714

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    taaaaacttgaagaacatac 334
              ||||||||||||||||||||
Sbjct: 169049 taaaaacttgaagaacatac 169030
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>emb|AL832718.1|HSM804029 Homo sapiens mRNA; cDNA DKFZp313C149 (from clone DKFZp313C149)
          Length = 4340

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  tgtggagaagtatttggaaa 511
            ||||||||||||||||||||
Sbjct: 1794 tgtggagaagtatttggaaa 1813
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>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence
          Length = 225687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    aggaggaggcaggggtggtg 294
              ||||||||||||||||||||
Sbjct: 223096 aggaggaggcaggggtggtg 223115
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>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence
          Length = 186518

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  aggaggaggcaggggtggtg 294
            ||||||||||||||||||||
Sbjct: 2179 aggaggaggcaggggtggtg 2198
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>emb|AL929147.7| Mouse DNA sequence from clone RP23-429P18 on chromosome 2, complete
             sequence
          Length = 155602

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   catatgaagttttcaagtgc 267
             ||||||||||||||||||||
Sbjct: 95749 catatgaagttttcaagtgc 95768
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>gb|U24736.1|HIV1U24736 Human immunodeficiency virus type 1 envelope glycoprotein (env)
           gene, V3 region, clone Mbu2.37, partial cds
          Length = 319

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 tacagattgcttcagctgta 150
           ||||||||||||||||||||
Sbjct: 90  tacagattgcttcagctgta 71
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>gb|U04527.1|BBU04527 Borrelia burgdorferi 212 DNA gyrase b subunit (gyrB) and ribonuclease
            P protein component (rnpA) genes, partial cds, DnaA
            protein (dnaA), DNA  polymerase III beta subunit (dnaN),
            and ribosomal protein L34 (rpmH) genes,  complete cds
          Length = 4943

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 145  gctgtaacagaactaaaagcatat 168
            ||||||||| ||||||||||||||
Sbjct: 2379 gctgtaacaaaactaaaagcatat 2402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,399,753
Number of Sequences: 3902068
Number of extensions: 5399753
Number of successful extensions: 112439
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112094
Number of HSP's gapped (non-prelim): 345
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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