Clone Name | baak4f14 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds | 48 | 0.011 | 2 | gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306, secti... | 44 | 0.18 | 3 | ref|XM_547974.2| PREDICTED: Canis familiaris similar to CG32732-... | 40 | 2.8 | 4 | emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... | 40 | 2.8 |
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>gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds Length = 842 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 27 ggtgctcctccagatcgctctcttcgtc 54 ||||||||| |||||||||||||||||| Sbjct: 200 ggtgctcctgcagatcgctctcttcgtc 227
>gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306, section 321 of 469 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gacggtgcgcgcctggccagcc 173 |||||||||||||||||||||| Sbjct: 738 gacggtgcgcgcctggccagcc 759
>ref|XM_547974.2| PREDICTED: Canis familiaris similar to CG32732-PA (LOC490852), mRNA Length = 2695 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 caggactcggtggtggtgctctgg 124 ||||||| |||||||||||||||| Sbjct: 2164 caggactgggtggtggtgctctgg 2187
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccaggactcggtggtggtgc 119 |||||||||||||||||||| Sbjct: 236077 ccaggactcggtggtggtgc 236096 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,151,756 Number of Sequences: 3902068 Number of extensions: 1151756 Number of successful extensions: 89326 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89319 Number of HSP's gapped (non-prelim): 7 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)