Clone Name | baak4g09 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 817 bits (412), Expect = 0.0 Identities = 448/460 (97%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 137 ggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcgg 196 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 256 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| Sbjct: 257 gaagttcgagaccctgtcttacttgccaccgctcaccacggaggccctcctcaagcaggt 316 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 376 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 377 cttccgtgagcacaacgcgtctcccgggtactacgatggccggtactggacaatgtggaa 436 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 437 gctgcctatgttcgggtgcaccgacgccacacaggtgatcaacgaggtggaggaggtcaa 496 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 497 gaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggtgca 556 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 557 gtgcgtcagcttcatcgccttcaagccaccgggctgcgag 596
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 809 bits (408), Expect = 0.0 Identities = 448/458 (97%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||| |||| Sbjct: 74 ggggctcaagtccaccgccggccttcccgtcagccgccgctccaacg---ctagc-tcgg 129 Query: 61 c-agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ccagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 189 Query: 120 agaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcagg 179 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 190 agaagttcgagaccctgtcttaccttccaccactcagcacggaggccctccttaagcagg 249 Query: 180 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 309 Query: 240 tcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtgga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 tcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtgga 369 Query: 300 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 429 Query: 360 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 489 Query: 420 agtgcgtcagcttcatcgccttcaagccaccaggctgc 457 ||||||||||||||||||| |||||||||||||||||| Sbjct: 490 agtgcgtcagcttcatcgctttcaagccaccaggctgc 527
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 682 bits (344), Expect = 0.0 Identities = 431/460 (93%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 97 ggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcgg 156 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 157 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggtatcaa 216 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 217 gaagttcgagaccctgtcctacttgccaccgctcagcacggagggcctccttaagcaggt 276 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 277 cgactacctgatccgctccaagtgggtgccctgcctcgagtttagaaaggttgggttcat 336 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 337 cttccgtgaacacaacgtatcccctgggtactacgatggccggtactggacaatgtggaa 396 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 || ||||||||||||||| ||| | |||| |||||| || ||||||||||||||||| Sbjct: 397 actccctatgttcggatgccccgcccccacccaggtgatccccgaggtggaggaggtcag 456 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 457 gaaggagtaccctgacccctattgccgcatcatcggattcgacaacatgcgtcaggtgca 516 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 || ||||||||||||||||| ||||||||| ||||||||| Sbjct: 517 gtccgtcagcttcatcgcctccaagccaccgggctgcgag 556
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 666 bits (336), Expect = 0.0 Identities = 360/368 (97%) Strand = Plus / Plus Query: 93 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 152 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 153 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 212 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 473 Query: 213 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 533 Query: 273 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 332 ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 534 acgatggccggtattggacaatgtggaagctgcctatgttcgggtgcactgacgccacac 593 Query: 333 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 392 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 653 Query: 393 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccag 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 654 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgg 713 Query: 453 gctgcgag 460 |||||||| Sbjct: 714 gctgcgag 721 Score = 180 bits (91), Expect = 3e-42 Identities = 97/99 (97%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 51 ggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcgg 110 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||||||||||||||||||||||||| Sbjct: 111 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 149
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 626 bits (316), Expect = e-176 Identities = 355/368 (96%) Strand = Plus / Plus Query: 93 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 152 ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 153 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 212 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 387 Query: 213 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 272 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 388 gcctcgagttcagcaaggttgggtttatcttccgtgagcacaacgcatcccctgggtact 447 Query: 273 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 332 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 448 acgatggccggtactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgc 507 Query: 333 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 392 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 567 Query: 393 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccag 452 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 568 tcggattcgacaacatgcgccaggtgcagtgcgtcagcttcatcgccttcaagccaccgg 627 Query: 453 gctgcgag 460 |||||||| Sbjct: 628 gctgcgag 635 Score = 172 bits (87), Expect = 6e-40 Identities = 96/99 (96%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 51 ggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcgg 110 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||||||||||||||||||| |||||||||| Sbjct: 111 cagcgtcagcaacggtggaaggatcaggcgcatgcaggt 149
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 597 bits (301), Expect = e-167 Identities = 420/460 (91%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||| |||||||||||||||||| |||||||||| | | || ||||| | Sbjct: 118 ggggctcaagtcgaccgccggcctccccgtcggccgccgctccggcagcgccggcctcag 177 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 178 cagcgtcagcaacggcggaaggatcagatgcatgcaggtgtggccaattgagggcatcaa 237 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 238 gaagttcgagaccctgtcttacttgccacccctctccacggaggccctcctgaagcaggt 297 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 298 cgactacctgatccgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgt 357 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 |||||||||||||||| || || ||||||||||| || || ||||||||||||||||| Sbjct: 358 cttccgtgagcacaacaactcccccgggtactacgacggtcgatactggacaatgtggaa 417 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 | ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 418 gttgcctatgttcgggtgcaccgacgccacgcaggtgctcaatgaggtggaggaggtcaa 477 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 |||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 478 gaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacatgcgccaggtgca 537 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||| ||||||| ||||||| |||||||| Sbjct: 538 gtgcgtcagcttcattgccttcaggccaccangctgcgag 577
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 571 bits (288), Expect = e-160 Identities = 417/460 (90%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||| ||||||||||||||| ||||| ||||||| | | | ||||| | Sbjct: 108 ggggctcaagtcgaccgccggcctccccatcagctgccgctccggcagcaccggcctcag 167 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 |||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 168 cagcgtcagcaatggcggaaggatcagatgcatgcaggtgtggccaattgagggcatcaa 227 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||| Sbjct: 228 gaagttcgagaccctgtcttacttgccacccctctccacggaggccctcttgaagcaggt 287 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 288 cgactacttgatccgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgt 347 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 |||||||||||||||| || || ||||||||||| || || ||||||||||||||||| Sbjct: 348 cttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgtggaa 407 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 408 gctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggaggttaa 467 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 468 gaaggagtaccctgatgcgtatgtccgcgtcatcggtttcgacaacatgcgccaggtgca 527 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||||||||||||| ||||||| |||||||||||||||| Sbjct: 528 atgcgtcagcttcattgccttcaggccaccaggctgcgag 567
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 563 bits (284), Expect = e-157 Identities = 413/456 (90%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||| |||| |||||| ||| ||||||||||||| | | | || ||||| ||||| Sbjct: 45 ctcaagtcgaccgacggcctgcccatcagccgccgctccagcagcgccggcctcagcagc 104 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 105 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaag 164 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 |||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 165 ttcgagaccctgtcttacctgccacccctctccacggaggccctcctgaagcaggtcgac 224 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 ||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 225 tacttgatccgctccaagtgggtgccctgcctcgagttcagcaaggttggtttcgtcttc 284 Query: 245 cgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctg 304 ||||||||||| || || || ||||| || || || ||||||||||||||||||||| Sbjct: 285 cgtgagcacaatagctcccccggatactatgacggtcgatactggacaatgtggaagctg 344 Query: 305 cctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaag 364 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 cctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaag 404 Query: 365 gagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgc 424 |||||||||||||| ||||||||| ||||||| ||||||||| |||| |||||||||||| Sbjct: 405 gagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggtgcagtgc 464 Query: 425 gtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||| |||||| || |||||| Sbjct: 465 gtcagcttcatcgccttcaggccaccgggttgcgag 500
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 519 bits (262), Expect = e-144 Identities = 340/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 513 bits (259), Expect = e-142 Identities = 410/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccaattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 |||||||||||||||||| |||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctgtcttacctgccaccactgtcagaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| ||||| |||||| |||||||| |||| |||||||||||||||||||| Sbjct: 339 gcccatgttcggctgcactgacgcctcacaggtgatcaaggaggtggaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 ||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 399 ggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||| ||||||||||||||||||||| Sbjct: 459 cgtcagcttcatcgcattcaagccaccaggctgcgag 495
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 511 bits (258), Expect = e-142 Identities = 339/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 455 tgcgag 460 |||||| Sbjct: 780 tgcgag 785 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| |||||||| ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggcctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 511 bits (258), Expect = e-142 Identities = 339/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 480 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || ||||| ||||| Sbjct: 481 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccctggttactat 540 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 541 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 600 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 601 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcgtcatc 660 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 661 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 720 Query: 455 tgcgag 460 |||||| Sbjct: 721 tgcgag 726 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 511 bits (258), Expect = e-142 Identities = 339/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 478 gtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 511 bits (258), Expect = e-142 Identities = 339/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 359 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 360 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 419 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 420 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 479 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 480 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 539 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 540 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccaggt 599 Query: 455 tgcgag 460 |||||| Sbjct: 600 tgcgag 605 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 511 bits (258), Expect = e-142 Identities = 339/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccgctccaagtgggtgccgtgc 536 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| Sbjct: 537 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaatgcatctcctggatactac 596 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 597 gatggccgttactggacaatgtggaagttgcctatgttcggatgcaccgatgcctcacag 656 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 657 gtgatcaaggagctggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 716 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 717 ggtttcgataacttgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggt 776 Query: 455 tgcgag 460 |||||| Sbjct: 777 tgcgag 782 Score = 103 bits (52), Expect = 5e-19 Identities = 84/95 (88%), Gaps = 6/95 (6%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||||||||| ||||||||||||||||| | || ||||||||||| Sbjct: 44 ctcaagtccaccgccggcctgcccgtcagccgccgctcca------ctggcctcggcagc 97 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||| ||| ||||||||||||||||||||||| Sbjct: 98 gtcagcagcggcggaaggatcaggtgcatgcaggt 132
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 507 bits (256), Expect = e-141 Identities = 331/356 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 541 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 542 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 601 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 602 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccactcag 661 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 662 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 721 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 450 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 722 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 777 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacggccggtctccccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 505 bits (255), Expect = e-140 Identities = 306/323 (94%) Strand = Plus / Plus Query: 138 cttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgct 197 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 198 ccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacg 257 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 62 ccaagtgggtgccttgccttgagttcagcaaggtcgggttcatcttccgtgagcacaatg 121 Query: 258 catctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggat 317 | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 122 cgtctcccgggtactacgacggccgctactggacaatgtggaagctgcctatgttcgggt 181 Query: 318 gcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacg 377 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gcaccgacgccacacaggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacg 241 Query: 378 cgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcg 437 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 242 cgtacgtccgcatcatcggattcgacaacatgcgccaggtgcagtgcgtcagcttcattg 301 Query: 438 ccttcaagccaccaggctgcgag 460 ||||||||||||| ||||||||| Sbjct: 302 ccttcaagccaccgggctgcgag 324
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 505 bits (255), Expect = e-140 Identities = 409/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccaattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 |||||||||||||||||| |||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctgtcttacctgccaccactgtcagaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| ||||| |||||| |||||||| ||| |||||||||||||||||||| Sbjct: 339 gcccatgttcggctgcactgacgcctcacaggtgatcagggaggtggaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 ||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 399 ggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||| ||||||||||||||||||||| Sbjct: 459 cgtcagcttcatcgcattcaagccaccaggctgcgag 495
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 505 bits (255), Expect = e-140 Identities = 409/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 ||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| |||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 339 gcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 | ||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||| Sbjct: 399 gaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||| ||||||||| Sbjct: 459 cgtcagcttcatcgccttcaagccaccgggctgcgag 495
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 505 bits (255), Expect = e-140 Identities = 409/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 ||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| |||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 339 gcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 | ||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||| Sbjct: 399 gaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||| ||||||||| Sbjct: 459 cgtcagcttcatcgccttcaagccaccgggctgcgag 495
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 504 bits (254), Expect = e-139 Identities = 338/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| |||||||||||||| || || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcactacagctcccccgggtactac 599 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 455 tgcgag 460 |||||| Sbjct: 780 tgcgag 785 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| |||||||| ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggcctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 504 bits (254), Expect = e-139 Identities = 338/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 784 Query: 455 tgcgag 460 |||||| Sbjct: 785 tgcgag 790 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||| || ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtcgacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||| ||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtacatgcaggt 135
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 504 bits (254), Expect = e-139 Identities = 338/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 784 Query: 455 tgcgag 460 |||||| Sbjct: 785 tgcgag 790 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||| || ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtcgacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 504 bits (254), Expect = e-139 Identities = 338/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 363 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 364 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 423 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 424 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 483 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 484 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 543 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 544 ggcttcgacaacctgcgtcaggtgcagtgcgtcagcttcatcgcctttaggccaccgggt 603 Query: 455 tgcgag 460 |||||| Sbjct: 604 tgcgag 609 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 97 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 504 bits (254), Expect = e-139 Identities = 338/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 500 bits (252), Expect = e-138 Identities = 409/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 4 gctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcag 63 |||||||||||| || ||||| ||||||||||||||| |||| | |||| ||||| Sbjct: 42 gctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttggcag 98 Query: 64 cgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaa 123 |||||||||||||||||| ||| | ||||||||||||||||| || |||||||||||||| Sbjct: 99 cgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatcaagaa 158 Query: 124 gttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcga 183 ||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||| Sbjct: 159 gttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcga 218 Query: 184 ctacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatctt 243 || | ||||||||||||||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 219 cttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcatctt 278 Query: 244 ccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagc 302 ||| |||||| | ||| |||| || |||||||| ||| ||||||||||||||||||||| Sbjct: 279 ccgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagc 337 Query: 303 tgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaaga 362 |||| |||||||| |||||||||||| |||||||| |||| ||||||||||||||||||| Sbjct: 338 tgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtcaaga 397 Query: 363 aggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagt 422 |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 398 aggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgcagt 457 Query: 423 gcgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||||||||||||||||||||||||||| ||||||||| Sbjct: 458 gcgtcagcttcatcgccttcaagccaccgggctgcgag 495
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 498 bits (251), Expect = e-138 Identities = 408/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 4 gctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcag 63 |||||||||||| || ||||| ||||||||||||||| |||| | |||| ||||| Sbjct: 42 gctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttggcag 98 Query: 64 cgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaa 123 |||||||||||||||||| ||| | ||||||||||||||||| || |||||||||||||| Sbjct: 99 cgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatcaagaa 158 Query: 124 gttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcga 183 ||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||| Sbjct: 159 gttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcga 218 Query: 184 ctacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatctt 243 || | ||||||||||||||||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 219 cttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcatctt 278 Query: 244 ccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagc 302 ||| |||||| | ||| |||| || |||||||| ||| ||||||||||||||||||||| Sbjct: 279 ccgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagc 337 Query: 303 tgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaaga 362 |||| |||||||| |||||||||||| |||||||| |||| ||||||||||||||||||| Sbjct: 338 tgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtcaaga 397 Query: 363 aggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagt 422 |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 398 aggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgcagt 457 Query: 423 gcgtcagcttcatcgccttcaagccaccaggctgcga 459 |||||||||||||||||||||||||||| |||||||| Sbjct: 458 gcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 498 bits (251), Expect = e-138 Identities = 411/461 (89%), Gaps = 5/461 (1%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || ||||| ||||||||||||||| |||| | |||| || Sbjct: 39 ggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttgg 95 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||||| Sbjct: 96 cagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatcaa 155 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||| ||||||||||| |||||||||||| |||||| | Sbjct: 156 gaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcagat 215 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||| | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||| Sbjct: 216 cgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcat 275 Query: 241 cttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtgga 299 |||||| ||| || | ||| |||| || |||||||| ||| |||||||||||||||||| Sbjct: 276 cttccgcgagtacggcagca-ctcccggatactacgacggcaggtactggacaatgtgga 334 Query: 300 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 359 ||||||| |||||||| |||||||||||| |||||||| |||| |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 360 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 419 ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgc 454 Query: 420 agtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||| |||||||||||||||||||||||||||||||||||| Sbjct: 455 agtgtgtcagcttcatcgccttcaagccaccaggctgcgag 495
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 498 bits (251), Expect = e-138 Identities = 408/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 ||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| |||||||||||| ||||||| |||| ||||||||||| |||||||| Sbjct: 339 gcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggacgtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 | ||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||| Sbjct: 399 gaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||| ||||||||| Sbjct: 459 cgtcagcttcatcgccttcaagccaccgggctgcgag 495
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 498 bits (251), Expect = e-138 Identities = 411/461 (89%), Gaps = 5/461 (1%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || ||||| ||||||||||||||| |||| | |||| || Sbjct: 39 ggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttgg 95 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||||| Sbjct: 96 cagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatcaa 155 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||| |||||||||||| |||||||||||| |||||| | Sbjct: 156 gaagttcgagaccctgtcttacctgccaccactcacagaggaggccctcctgaagcagat 215 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||| | ||||||||||||||||||| |||||||||||||||||| | | ||| ||||| Sbjct: 216 cgacttcttgatccgctccaagtgggttccttgcctcgagttcagccaaggtggcttcat 275 Query: 241 cttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtgga 299 |||||| |||||| | ||| ||||||| ||||| || ||| |||||||||||||||||| Sbjct: 276 cttccgcgagcacggcagca-ctcctggatactatgacggcaggtactggacaatgtgga 334 Query: 300 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 359 |||| || ||||||||||||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 335 agctccccatgttcggatgcaccgacgcctcccaggtgatcaaggaggtggaggaggtca 394 Query: 360 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 419 ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgc 454 Query: 420 agtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgag 495
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 498 bits (251), Expect = e-138 Identities = 332/359 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccagg 595 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 498 bits (251), Expect = e-138 Identities = 340/367 (92%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 999 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 1000 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 1058 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1059 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 1118 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 1119 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 1178 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| || Sbjct: 1179 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccaccggg 1238 Query: 454 ctgcgag 460 |||||| Sbjct: 1239 ttgcgag 1245 Score = 335 bits (169), Expect = 8e-89 Identities = 295/337 (87%) Strand = Plus / Plus Query: 107 atcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggcc 166 ||||||||||| |||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 167 ctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagc 226 ||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccgctccaagtgggtgccctgcctcgacttcagc 5415 Query: 227 aaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtac 286 ||||| | ||| |||||||||||||||| || ||||||||||| |||||| | ||| Sbjct: 5416 aaggtcagcttcgtcttccgtgagcacaataactcccctgggtactatgatggctgatac 5475 Query: 287 tggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgag 346 |||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 5476 cggacaaagtggaagttgcctatgttcgggtgcactgacgccacacaggtgctcaaggag 5535 Query: 347 gtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaac 406 ||||||||||||||||||||||||| ||||| ||||||| |||| ||| ||||||||| Sbjct: 5536 gtggaggaggtcaagaaggagtaccttgacggctatgtccttatcaacggcttcgacaac 5595 Query: 407 atgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 ||| | |||||||| ||||||| |||||| |||||| Sbjct: 5596 atgtgccaggtgcattgcgtcactttcatcaccttca 5632 Score = 295 bits (149), Expect = 6e-77 Identities = 299/348 (85%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 || |||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcccctccaagtgagtgccctgc 4060 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 ||||||||||| || |||| ||||| |||||||||| ||| || ||||||||||| Sbjct: 4061 ctcgagttcagtaacattggcttcatattccgtgagcgcaataggtcccctgggtactat 4120 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || |||| |||||||||||||| ||||| || || ||||||||| ||| || Sbjct: 4121 gaccgctaatactaaacaatgtggaagctacctatctttgggtgcaccgacaccaagaag 4180 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4181 gtgctcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtctgcatcatc 4240 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 442 || ||||||||| |||| |||||| ||||||||||||||||| ||||| Sbjct: 4241 ggcttcgacaacctgcgccaggtgtagtgcgtcagcttcatcaccttc 4288 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 676 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcgg 732 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 733 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 771
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 498 bits (251), Expect = e-138 Identities = 340/367 (92%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 374 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 375 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 433 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 434 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 493 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 494 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 553 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| || Sbjct: 554 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccaccggg 613 Query: 454 ctgcgag 460 |||||| Sbjct: 614 ttgcgag 620 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 51 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcgg 107 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 108 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 146
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 1245 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1246 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 1305 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1306 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 1365 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1366 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 1425 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 1426 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 1485 Query: 455 tgcgag 460 |||||| Sbjct: 1486 tgcgag 1491 Score = 111 bits (56), Expect = 2e-21 Identities = 87/95 (91%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 ||||||||||| |||||||| ||||||||||||||||| | || || |||||||||||| Sbjct: 750 ctcaagtccacagccggcctgcccgtcagccgccgctcca--ggggc-agcctcggcagc 806 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||| ||||||||||||||||||||||| Sbjct: 807 gtcagcaacggcggaaggatcaggtgcatgcaggt 841
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 660 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 719 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 455 tgcgag 460 |||||| Sbjct: 780 tgcgag 785 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcttatgtccgcgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtactctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccaccaggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 496 bits (250), Expect = e-137 Identities = 337/366 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccaccaggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 494 bits (249), Expect = e-136 Identities = 336/365 (92%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgcc 525 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 ||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||| Sbjct: 526 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactacg 585 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 | || || |||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 586 acggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcagg 645 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 646 tgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 705 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 455 | ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 706 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggtt 765 Query: 456 gcgag 460 ||||| Sbjct: 766 gcgag 770 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| ||||||||| |||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 490 bits (247), Expect = e-135 Identities = 407/457 (89%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| | | || |||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgc---agctccgccagcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggtggaagaatcagatgcatgcaggtgtggccgattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 ||||||||||| |||||| ||||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctttcttacctgccaccactctcagaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgccttgagttcagcaaggttggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| | || || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagcaccccc-ggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| |||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 339 gcccatgttcgggtgcaccgacgcctcacaggtcatcaaggaggtggaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 ||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 399 ggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||||||||||||||||||||||||| ||||||||| Sbjct: 459 tgtcagcttcatcgccttcaagccaccgggctgcgag 495
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 490 bits (247), Expect = e-135 Identities = 410/461 (88%), Gaps = 5/461 (1%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || ||||| ||||||||||||||| |||| | |||| || Sbjct: 39 ggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttgg 95 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||||| Sbjct: 96 cagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatcaa 155 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||| |||| |||||| |||||||||||| |||||| | Sbjct: 156 gaagttcgagaccctgtcttacctgccgccactctcagaggaggccctcctgaagcagat 215 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 216 cgacttcttgatccgctccaagtgggttccttgcctcgagttcagcaaggttggcttcat 275 Query: 241 cttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtgga 299 |||||| |||||| | ||| |||| || |||||||| ||| |||||||||||||||||| Sbjct: 276 cttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggacaatgtgga 334 Query: 300 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 359 ||||||| |||||||| |||||||||||| |||||||| |||| ||||| |||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggttgaggaggtca 394 Query: 360 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 419 ||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 395 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 420 agtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgag 495
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 488 bits (246), Expect = e-135 Identities = 339/370 (91%) Strand = Plus / Plus Query: 91 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacc 150 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 151 actcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcc 210 ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgcc 352 Query: 211 ttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggta 270 ||||||||||||||||||||||| ||| ||||||||||||||||| || || || || Sbjct: 353 ctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggata 412 Query: 271 ctacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccac 330 |||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 413 ctacgacggccgatactggactatgtggaagctgcctatgttcgggtgcaccgacgccac 472 Query: 331 acaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcat 390 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 473 gcaggtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgt 532 Query: 391 catcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 450 |||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 533 catcggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 592 Query: 451 aggctgcgag 460 || |||||| Sbjct: 593 gggttgcgag 602 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 97 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 488 bits (246), Expect = e-135 Identities = 336/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 488 bits (246), Expect = e-135 Identities = 336/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 417 gacggccgatactggacaatgtggaagctccctatgttcgggtgcaccgacgccacacag 476 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || || |||||| |||| |||||||||||||||||||||| |||||||| |||||| || Sbjct: 537 ggctttgacaacctgcgccaggtgcagtgcgtcagcttcagcgccttcaggccaccgggt 596 Query: 455 tgcgag 460 |||||| Sbjct: 597 tgcgag 602 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 484 bits (244), Expect = e-133 Identities = 328/356 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 540 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||| ||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 541 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 600 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 ||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 601 gatagtcgatactggacaatgtggaagctgcctatgttcggttgcaccgacgccacacag 660 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 661 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 720 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 450 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 721 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 776 Score = 89.7 bits (45), Expect = 7e-15 Identities = 86/99 (86%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| | ||| ||||||||||| |||||||| | || |||||||| Sbjct: 40 ggggctcaagtccacaggcggtctccccgtcagtcgccgctccagaggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 482 bits (243), Expect = e-133 Identities = 409/461 (88%), Gaps = 5/461 (1%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || ||||| ||||||||||||||| |||| | |||| || Sbjct: 39 ggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg---gccttgg 95 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||||| Sbjct: 96 cagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatcaa 155 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||| |||||||||||||||||| |||||||||||| |||||||||||| |||||| | Sbjct: 156 gaaattcgagaccctgtcttacctgccaccactcacagaggaggccctcctgaagcagat 215 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||| | ||||||||||||||||||| || ||||| ||||||||||||||||| ||||| Sbjct: 216 cgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttggcttcat 275 Query: 241 cttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtgga 299 |||||| |||||| | ||| ||||||| ||||| || ||| |||||||||||||||||| Sbjct: 276 cttccgcgagcacggcagca-ctcctggatactatgacggcaggtactggacaatgtgga 334 Query: 300 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 359 ||||||| |||||||| |||||||||||| |||||||| |||| |||||||||||||||| Sbjct: 335 agctgcccatgttcgggtgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 360 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 419 |||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 395 agaaagagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 420 agtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 455 agtgcgtcagtttcatcgccttcaagccaccgggctgcgag 495
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 480 bits (242), Expect = e-132 Identities = 260/266 (97%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 16 ggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcgg 75 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 135 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| Sbjct: 136 gaagttcgagaccctgtcttacctgccaccgctcagcacggaggccctcctcaagcaggt 195 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 255 Query: 241 cttccgtgagcacaacgcatctcctg 266 ||||||||||||||||||||| |||| Sbjct: 256 cttccgtgagcacaacgcatcacctg 281 Score = 224 bits (113), Expect = 2e-55 Identities = 116/117 (99%) Strand = Plus / Plus Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 418 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 419 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgag 475
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || ||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgtttgggtgcaccgacgccacacag 653 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 713 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 773 Query: 455 tgcgag 460 |||||| Sbjct: 774 tgcgag 779 Score = 113 bits (57), Expect = 5e-22 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatgggggaaggatcaggtgcatgcaggt 135
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 ||||||||||||||||| || || ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggtaggcatcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgttcgggtgcaccgacgccacacag 653 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 713 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 773 Query: 455 tgcgag 460 |||||| Sbjct: 774 tgcgag 779 Score = 121 bits (61), Expect = 2e-24 Identities = 90/99 (90%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccaccgccggtctccccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||| || ||||| |||||||||||||||||||| | || | |||||||| Sbjct: 40 ggggctcaagtcgacagccggtctccccgtcagccgccgctccagcg---ccagcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgggtgccctgc 721 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| | ||||||||||||||| || || ||||||||| Sbjct: 722 ctcgagttcagcaaggttggcttcgttttccgtgagcacaacagctcccccgggtactac 781 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 782 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgctacacag 841 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 842 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 901 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| | || ||||||||||||||||||||||| ||||||| |||||| || Sbjct: 902 ggcttcgacaacctacgccaggtgcagtgcgtcagcttcattgccttcaggccaccgggt 961 Query: 455 tgcgag 460 |||||| Sbjct: 962 tgcgag 967 Score = 109 bits (55), Expect = 8e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||| ||||||||||| ||||||||||||||||| | | | || ||||| ||||| Sbjct: 55 ctcaagtcgaccgccggcctgcccgtcagccgccgctccagcagcgccggcctcagcagc 114 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||| ||||||||||||||||||||||| Sbjct: 115 gtcagcaacggcggaaggatcaggtgcatgcaggt 149
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 478 bits (241), Expect = e-132 Identities = 369/409 (90%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 53 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgag 112 ||||||||||||||||||||||||||||| ||| | ||||||||||||||||| || ||| Sbjct: 88 agcctcggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgag 147 Query: 113 ggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctt 172 |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 148 ggcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctg 207 Query: 173 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggtt 232 |||||| |||| | | ||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 208 aagcagatcgaattcttgatccgctccaagtgggttccctgcctggagttcagcaaggtt 267 Query: 233 gggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggac 291 || ||||||||||| |||||| | ||| |||| || |||||||| ||| |||||||||| Sbjct: 268 ggcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggac 326 Query: 292 aatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtgga 351 ||||||||||||||| |||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 327 aatgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtgga 386 Query: 352 ggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcg 411 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 387 ggaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttagacaacatccg 446 Query: 412 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 447 tcaagtgcagtgtgtcagcttcatcgccttcaagccaccaggctgcgag 495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccg 36 |||||||||||||| ||||||||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccg 74
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 474 bits (239), Expect = e-130 Identities = 405/457 (88%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| || |||||||||||||||||| | || | |||||||||| | Sbjct: 43 ctcaagtccaccgcaggactccccgtcagccgccgc---agcgcctccagcctcggcaac 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaag 124 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gtcagcaacggtggaaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaag 159 Query: 125 ttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgac 184 |||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||| Sbjct: 160 ttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgac 219 Query: 185 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttc 244 | | ||||||||||||||||||| || ||||| |||||||||||||| || ||||||||| Sbjct: 220 ttcttgatccgctccaagtgggttccctgccttgagttcagcaaggtgggcttcatcttc 279 Query: 245 cgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 || |||||| | ||| | || || |||||||| ||| |||||||||||||||||||||| Sbjct: 280 cgcgagcacggcagcaccccc-ggatactacgacggcaggtactggacaatgtggaagct 338 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||| |||||||| ||| | ||||| |||| ||||| |||||||||||||| Sbjct: 339 gcccatgttcggctgcaccgatgcctcgcaggtcatcaaggaggtagaggaggtcaagaa 398 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 ||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 399 ggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgcagtg 458 Query: 424 cgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||| ||||||||| Sbjct: 459 cgtcagcttcatcgccttcaagccaccgggctgcgag 495
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 472 bits (238), Expect = e-130 Identities = 334/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 97 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 472 bits (238), Expect = e-130 Identities = 334/366 (91%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 597 Query: 455 tgcgag 460 |||||| Sbjct: 598 tgcgag 603 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||||||| || ||||||||||||||||||||||| Sbjct: 97 ccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 464 bits (234), Expect = e-127 Identities = 309/334 (92%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 524 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 525 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 584 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 585 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 644 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 645 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 704 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtca 428 || || |||||| |||| |||||||||||||||| Sbjct: 705 ggctttgacaacctgcgccaggtgcagtgcgtca 738 Score = 105 bits (53), Expect = 1e-19 Identities = 88/99 (88%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| ||||||||| |||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 464 bits (234), Expect = e-127 Identities = 333/366 (90%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||| |||||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccgctccaagtgggtaccctgc 343 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||||||| ||||||||| || || || |||||| Sbjct: 344 ctcgagttcagcaaggttggcttcgtcttccgcgagcacaacagctcccccggttactac 403 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 404 gacggccggtactggacaatgtggaagctgcctatgttcggctgcacggacgccactcag 463 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 464 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 523 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| || Sbjct: 524 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccgggt 583 Query: 455 tgcgag 460 |||||| Sbjct: 584 tgcgag 589 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | ||| |||||||| Sbjct: 40 ggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---agcctcgg 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || ||||||||||||||||||||||| Sbjct: 97 caacgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 464 bits (234), Expect = e-127 Identities = 333/366 (90%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 365 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 366 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 425 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 426 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 485 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct: 486 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcaac 545 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 546 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 605 Query: 455 tgcgag 460 |||||| Sbjct: 606 tgcgag 611 Score = 77.8 bits (39), Expect = 3e-11 Identities = 85/99 (85%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| || ||||||||||||||||| | || |||||||| Sbjct: 51 ggggctcaagtccacagccggtctgcccgtcagccgccgctcca-----gcgagcctcgg 105 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | |||||| ||| || ||||||||||||||||||||||| Sbjct: 106 ccgcgtca-caatggcggaaggatcaggtgcatgcaggt 143
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 |||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgatcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 455 | ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| || | Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccgggtt 780 Query: 456 gcgag 460 ||||| Sbjct: 781 gcgag 785 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| ||||||||| |||||||||| | ||| |||||| | Sbjct: 40 ggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---agcctcag 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 454 bits (229), Expect = e-124 Identities = 316/345 (91%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 | ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcct 765 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/99 (87%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| ||||| ||||||||| |||||||||| | ||| |||||| | Sbjct: 40 ggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---agcctcag 96 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||||| || ||||||||||||||||||||||| Sbjct: 97 cagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 424 bits (214), Expect = e-115 Identities = 330/366 (90%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccgctccaagtgggttccctgcc 332 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactac 274 | ||||||||||||||||| ||||||||||| |||||| | ||| | || || |||||| Sbjct: 333 ttgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatactac 391 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||| |||||||||||||||||||| |||| |||||||| |||||||||||| ||||| Sbjct: 392 gacggcaggtactggacaatgtggaagttgcccatgttcgggtgcaccgacgcctcacag 451 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 452 gtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 511 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 512 ggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccaggc 571 Query: 455 tgcgag 460 |||||| Sbjct: 572 tgcgag 577 Score = 97.6 bits (49), Expect = 3e-17 Identities = 84/95 (88%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||| ||||||||||||||| | || | |||||||||||| Sbjct: 43 ctcaagtccaccgctggccttcccgtcagccgccgc---agcgcctccagcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||||||||| ||||||||||| Sbjct: 100 gtcagcaacggtggaaggatcagatgcatgcaggt 134
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 410 bits (207), Expect = e-111 Identities = 329/367 (89%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 365 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 366 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 424 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| ||| ||||||||||||||||||||||||| |||||||| ||||| |||||| |||| Sbjct: 425 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactgacgcctcaca 484 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 485 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 544 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 545 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcattcaagccaccggg 604 Query: 454 ctgcgag 460 ||||||| Sbjct: 605 ctgcgag 611 Score = 105 bits (53), Expect = 1e-19 Identities = 85/95 (89%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctccccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||| ||||||||||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggt 134
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 410 bits (207), Expect = e-111 Identities = 329/367 (89%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | |||||||||||| || ||| |||||| | ||||||||||||||||||| || ||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccgctccaagtgggttccctgc 345 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 |||||||||||||||||||| ||||||||||| |||||| | ||| | || || ||||| Sbjct: 346 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatacta 404 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 405 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 464 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 465 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 524 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 525 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccagg 584 Query: 454 ctgcgag 460 ||||||| Sbjct: 585 ctgcgag 591 Score = 73.8 bits (37), Expect = 4e-10 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 ||||||||||| || || |||||||||||||||||| | || | ||||| |||||| Sbjct: 43 ctcaagtccacggcagggctccccgtcagccgccgc---agcgcctccagcctgggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||| ||||| ||||||||||| Sbjct: 100 gtcagcaacggtggaagaatcagatgcatgcaggt 134
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 410 bits (207), Expect = e-111 Identities = 329/367 (89%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 339 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 || ||||||||||||||||| ||||||||||| | |||| | ||| | || || ||||| Sbjct: 340 cttgagttcagcaaggttggcttcatcttccgcgtgcacggcagcaccccc-ggatacta 398 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| ||| |||||||||||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 399 cgacggcaggtactggacaatgtggaagttgcccatgttcggctgcacagacgcctcaca 458 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 459 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 518 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 519 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccagg 578 Query: 454 ctgcgag 460 ||||||| Sbjct: 579 ctgcgag 585 Score = 97.6 bits (49), Expect = 3e-17 Identities = 84/95 (88%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagc 64 |||||||||||||| |||||| |||||||||||||| || ||| ||||||||||| Sbjct: 43 ctcaagtccaccgctggcctcgccgtcagccgccgcagcaa---tgccggcctcggcagc 99 Query: 65 gtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||| ||||||||||||||||||||||| Sbjct: 100 gtcagcaacggcggaaggatcaggtgcatgcaggt 134
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 410 bits (207), Expect = e-111 Identities = 329/367 (89%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||||||| | |||||| |||||| ||||||||||||||||||||| || ||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgc 342 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 || |||||||||||||| || |||||||||||||||||| | ||| |||| || ||||| Sbjct: 343 ctggagttcagcaaggtgggcttcatcttccgtgagcacggcagca-ctcccggatacta 401 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 402 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 461 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 462 ggtcatcaaggaggtggaggaggtgaagaaggagtaccctgacgcctatgtccgcatcat 521 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cggtttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 581 Query: 454 ctgcgag 460 ||||||| Sbjct: 582 ctgcgag 588 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 54 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 90 gcctcggcaacgtcagcaacggtggaaggatcagatgcatgcaggt 135
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 402 bits (203), Expect = e-109 Identities = 328/367 (89%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 |||||||||||| |||||| | |||| | ||||||||||||||||||| || ||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccgctccaagtgggttccctgc 338 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 273 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 339 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 397 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 ||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 398 cgatggcaggtactggacaatgtggaagctgcccatgttcggctgcactgatgcctcaca 457 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 458 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 517 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| Sbjct: 518 cggcttcgacaacatccgccaagtgcagtgcgtcagcttcatcgcattcaagccaccagg 577 Query: 454 ctgcgag 460 ||||||| Sbjct: 578 ctgcgag 584 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 54 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatcagatgcatgcaggt 134
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||| ||||||||||| |||||||||||||||||||| ||| | || ||||||| Sbjct: 119 ggggctcaaatccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcgg 178 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 ||||||||||||||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 179 cagcgtcagcaacggtggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaa 238 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||| ||||||||||| ||| ||||||| |||| |||| |||| | |||||| | Sbjct: 239 gaagtttgagaccctgtcgtacctgccaccgctcacggtcgaggacctcttgaagcagat 298 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| ||||| |||||||||||||||||||| || ||||| |||||| | Sbjct: 299 cgagtacctgctccggtccaaatgggtgccttgcctcgagtttagtaaggtcgggttcgt 358 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || |||||||||||||| |||||| |||||||||| |||||||| Sbjct: 359 ctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgtggaa 418 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 ||||||||||||||||||||| || ||||| ||||||||||| ||| | ||||||| ||| Sbjct: 419 gctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggaggccaa 478 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| || || || || | ||| ||||||||||| ||||||||| | | |||||||| Sbjct: 479 gaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcaggtgca 538 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 || | ||||||||||||| |||||| || || |||||| Sbjct: 539 gttgattagcttcatcgcctacaagcccccgggttgcgag 578
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 353 bits (178), Expect = 3e-94 Identities = 390/460 (84%), Gaps = 3/460 (0%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| ||| | ||| |||| Sbjct: 88 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccaact---ccagcttcgg 144 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 145 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 204 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 205 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 264 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || || | Sbjct: 265 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgt 324 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || || ||||| |||||||| ||| |||||||||| |||||||| Sbjct: 325 ctaccgtgagaaccacaagtcccctggatactacgacggcaggtactggaccatgtggaa 384 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| |||||||||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 385 gctgcccatgttcgggtgcaccgacgccacccaggtgctcaaggagctcgaggaggccaa 444 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 445 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggtgca 504 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 505 gctcatcagcttcatcgcctacaagcccccgggctgcgag 544
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 349 bits (176), Expect = 5e-93 Identities = 389/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 261 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 320 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 321 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 380 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 381 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 440 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 441 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 500 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 501 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 560 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 561 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 620 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 621 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 680 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 681 gctcatcagcttcatcgcctacaagcccccgggctgcgag 720
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 349 bits (176), Expect = 5e-93 Identities = 389/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 107 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 166 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 167 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 226 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 227 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 286 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 287 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 346 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 347 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 406 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 407 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 466 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 467 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 526 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 527 gctcatcagcttcatcgcctacaagcccccgggctgcgag 566
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 349 bits (176), Expect = 5e-93 Identities = 389/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 108 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 167 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 168 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 227 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 228 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 287 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 288 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 347 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 348 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 407 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 408 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 467 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 468 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 527 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 528 gctcatcagcttcatcgcctacaagcccccgggctgcgag 567
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 349 bits (176), Expect = 5e-93 Identities = 389/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 110 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 169 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 170 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 229 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 230 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 289 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 290 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 349 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 350 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 409 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 410 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 469 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 470 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 529 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 530 gctcatcagcttcatcgcctacaagcccccgggctgcgag 569
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 349 bits (176), Expect = 5e-93 Identities = 389/460 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 105 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 164 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 165 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 224 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 225 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 284 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 285 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 344 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 345 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 404 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 405 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 464 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 465 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 524 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||||| |||||| || ||||||||| Sbjct: 525 gctcatcagcttcatcgcctacaagcccccgggctgcgag 564
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 347 bits (175), Expect = 2e-92 Identities = 388/459 (84%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 103 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 162 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaag 121 | ||||||||| || |||||||||| |||||||||||||||||| || |||||||||||| Sbjct: 163 aacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaag 222 Query: 122 aagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtc 181 |||||||||||||| || ||| |||||||||||| | ||||| || | |||||| || Sbjct: 223 aagttcgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatc 282 Query: 182 gactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatc 241 || |||||| | || |||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 283 gagtacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtc 342 Query: 242 ttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaag 301 | ||||||| || || ||||| ||||||||||||||| |||| ||||| ||||||||| Sbjct: 343 taccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaag 402 Query: 302 ctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaag 361 ||||| |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||| Sbjct: 403 ctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaag 462 Query: 362 aaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcag 421 |||| ||||| || || | |||||| |||||||| ||||||||| | | ||||||||| Sbjct: 463 aaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcag 522 Query: 422 tgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||| |||||| ||||| |||||| Sbjct: 523 ttgattagcttcatcgcctacaagcccccaggttgcgag 561
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 347 bits (175), Expect = 2e-92 Identities = 388/459 (84%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 120 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 179 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaag 121 | ||||||||| || |||||||||| |||||||||||||||||| || |||||||||||| Sbjct: 180 aacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaag 239 Query: 122 aagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtc 181 |||||||||||||| || ||| |||||||||||| | ||||| || | |||||| || Sbjct: 240 aagttcgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatc 299 Query: 182 gactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatc 241 || |||||| | || |||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 300 gagtacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtc 359 Query: 242 ttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaag 301 | ||||||| || || ||||| ||||||||||||||| |||| ||||| ||||||||| Sbjct: 360 taccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaag 419 Query: 302 ctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaag 361 ||||| |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||| Sbjct: 420 ctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaag 479 Query: 362 aaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcag 421 |||| ||||| || || | |||||| |||||||| ||||||||| | | ||||||||| Sbjct: 480 aaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcag 539 Query: 422 tgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||| |||||| ||||| |||||| Sbjct: 540 ttgattagcttcatcgcctacaagcccccaggttgcgag 578
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 339 bits (171), Expect = 5e-90 Identities = 387/459 (84%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 133 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 192 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 193 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 252 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| |||||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 253 gaagttcgagaccctctcttacctgccaccgctcaccgtggaggacctcctgaagcagat 312 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| ||||| |||| |||||||||||||| |||||||||||||||||||| || || | Sbjct: 313 cgagtacctcctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgt 372 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || |||||||||||| |||||||||| |||||||| Sbjct: 373 ctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtggaa 432 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 433 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 492 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| ||||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 493 gaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 552 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcga 459 | | ||||||||||||||| |||||| || |||||||| Sbjct: 553 gctcatcagcttcatcgcctacaagcccccgggctgcga 591
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 325 bits (164), Expect = 7e-86 Identities = 386/460 (83%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 96 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 155 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || || |||||||||||||||||||||||||| || ||||||||||| Sbjct: 156 caacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaa 215 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 ||||||||||||||| || ||| ||||||| |||| | ||||| |||||| |||||| | Sbjct: 216 gaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagat 275 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| |||||||||||||| |||||||||||||||||||| || ||| | Sbjct: 276 cgagtacctgctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgt 335 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| || || ||| || || || ||||||||| |||||||||| |||||||| Sbjct: 336 ctaccgtgagaaccacagatcccccggatattacgatggcaggtactggaccatgtggaa 395 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||| ||| Sbjct: 396 gctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaa 455 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| | ||||||| || | ||||| |||||||| ||||||||| | | |||||||| Sbjct: 456 gaaggcgaaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgca 515 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | |||| |||||||||| |||||| || ||||||||| Sbjct: 516 gctcatcagtttcatcgcctacaagcccccgggctgcgag 555
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 323 bits (163), Expect = 3e-85 Identities = 385/459 (83%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 118 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 177 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaag 121 | ||||||||| || |||||||||| || ||||||||||||||| || |||||||||||| Sbjct: 178 aacgtcagcaatggcggaaggatcaagttcatgcaggtgtggccaattgagggcatcaag 237 Query: 122 aagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtc 181 |||||||||||||| || ||| |||||||||||| | ||||| || | |||||| || Sbjct: 238 aagttcgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatc 297 Query: 182 gactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatc 241 || |||||| | || |||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 298 gagtacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtc 357 Query: 242 ttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaag 301 | ||| ||| || || ||||| ||||||||||||||| |||| ||||| ||||||||| Sbjct: 358 taccgcgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaag 417 Query: 302 ctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaag 361 ||||| |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||| Sbjct: 418 ctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaag 477 Query: 362 aaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcag 421 |||| ||||| || || | | |||| |||||||| ||||||||| | | ||||||||| Sbjct: 478 aaggcctaccccgatgcctttatccgtatcatcggcttcgacaacgtcaggcaggtgcag 537 Query: 422 tgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 | | ||||||||||||| |||||| ||||| |||||| Sbjct: 538 ttgattagcttcatcgcctacaagcccccaggttgcgag 576
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 303 bits (153), Expect = 3e-79 Identities = 342/405 (84%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 104 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 163 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaag 121 | ||||||||| || |||||||||| |||||||||||||||||| || |||||||||||| Sbjct: 164 aacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaag 223 Query: 122 aagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtc 181 |||||||||||||| || ||| |||||||||||| | ||||| || | |||||| || Sbjct: 224 aagttcgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatc 283 Query: 182 gactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatc 241 || |||||| | || ||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 284 gagtacctgcttcgatccaagtgggtgccttgtctcgagttcagcaaggttgggttcgtc 343 Query: 242 ttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaag 301 | ||||||| || || ||||| || |||||||||||| |||| ||||| ||||||||| Sbjct: 344 taccgtgagaaccacaggtctcccggatactacgatggcaggtattggaccatgtggaag 403 Query: 302 ctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaag 361 ||||| |||||||| |||||||| ||||| ||||||||||| || | || || | |||| Sbjct: 404 ctgcccatgttcggctgcaccgatgccacccaggtgctcaaggaactcgaagatgccaag 463 Query: 362 aaggagtaccctgacgcgtatgtccgcatcatcggattcgacaac 406 |||| |||||||| || | |||||| |||||||| ||||||||| Sbjct: 464 aaggcctaccctgatgcctttgtccgtatcatcggcttcgacaac 508
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 295 bits (149), Expect = 6e-77 Identities = 311/365 (85%) Strand = Plus / Minus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10080033 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10080032 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079973 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079972 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079913 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079912 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079853 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 455 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 10079852 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 10079793 Query: 456 gcgag 460 ||||| Sbjct: 10079792 gcgag 10079788 Score = 274 bits (138), Expect = 2e-70 Identities = 309/366 (84%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261988 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11262047 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11262048 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11262107 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11262108 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11262167 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11262168 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11262227 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 11262228 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 11262287 Query: 455 tgcgag 460 |||||| Sbjct: 11262288 tgcgag 11262293 Score = 244 bits (123), Expect = 2e-61 Identities = 306/367 (83%) Strand = Plus / Plus Query: 94 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 153 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 154 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 213 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276650 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276709 Query: 214 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 273 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276710 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276769 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276770 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276829 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 11276830 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276889 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 11276890 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 11276949 Query: 454 ctgcgag 460 |||||| Sbjct: 11276950 ttgcgag 11276956 Score = 147 bits (74), Expect = 4e-32 Identities = 293/366 (80%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319797 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319798 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319857 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319858 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319917 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319918 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319977 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 11319978 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 11320037 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 11320038 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 11320097 Query: 455 tgcgag 460 |||||| Sbjct: 11320098 tgcgag 11320103 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||| ||||||||||| |||||||||||||||||||| ||| | || ||||||| Sbjct: 11276380 ggggctcaaatccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcgg 11276439 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||||||||||||| || |||||||| Sbjct: 11276440 cagcgtcagcaacggtggaaggatcagctgtatgcaggt 11276478 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 11261724 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 11261783 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | ||||||||| || |||||||||| |||||||||||| Sbjct: 11261784 aacgtcagcaatggcggaaggatcaagtgcatgcaggt 11261821 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 260 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 319 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266704 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266763 Query: 320 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 365 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266764 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266809 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctc 42 ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 11264761 ggggctcaagtccaccgccggcctcccagtgagccgccgctc 11264802 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || |||||||| || | ||||||||| | | | | ||| | || Sbjct: 11319541 ggggctcaagtccactgcgggcctcccggtgaaccgccgctccagcagctcgagctttgg 11319600 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || ||||||||||| ||||||||||| Sbjct: 11319601 caacgtcagcaatggcggaaggatcagatgcatgcaggt 11319639 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 10080350 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 10080291 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || || |||||||||||||||||||| Sbjct: 10080290 caacgtcagcaatggcggcaggatcaggtgcatgcaggt 10080252
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 295 bits (149), Expect = 6e-77 Identities = 311/365 (85%) Strand = Plus / Minus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10079918 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10079917 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079858 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079857 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079798 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079797 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079738 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 455 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 10079737 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 10079678 Query: 456 gcgag 460 ||||| Sbjct: 10079677 gcgag 10079673 Score = 274 bits (138), Expect = 2e-70 Identities = 309/366 (84%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261659 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11261718 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11261719 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11261778 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11261779 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11261838 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11261839 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11261898 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 11261899 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 11261958 Query: 455 tgcgag 460 |||||| Sbjct: 11261959 tgcgag 11261964 Score = 244 bits (123), Expect = 2e-61 Identities = 306/367 (83%) Strand = Plus / Plus Query: 94 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 153 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 154 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 213 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276321 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276380 Query: 214 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 273 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276381 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276440 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276441 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276500 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 11276501 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276560 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 11276561 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 11276620 Query: 454 ctgcgag 460 |||||| Sbjct: 11276621 ttgcgag 11276627 Score = 147 bits (74), Expect = 4e-32 Identities = 293/366 (80%) Strand = Plus / Plus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319468 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319469 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319528 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319529 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319588 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319589 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319648 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 11319649 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 11319708 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 11319709 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 11319768 Query: 455 tgcgag 460 |||||| Sbjct: 11319769 tgcgag 11319774 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||| ||||||||||| |||||||||||||||||||| ||| | || ||||||| Sbjct: 11276051 ggggctcaaatccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcgg 11276110 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||||||||||||| || |||||||| Sbjct: 11276111 cagcgtcagcaacggtggaaggatcagctgtatgcaggt 11276149 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 11261395 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 11261454 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | ||||||||| || |||||||||| |||||||||||| Sbjct: 11261455 aacgtcagcaatggcggaaggatcaagtgcatgcaggt 11261492 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 260 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 319 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266375 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266434 Query: 320 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 365 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266435 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266480 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctc 42 ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 11264432 ggggctcaagtccaccgccggcctcccagtgagccgccgctc 11264473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || |||||||| || | ||||||||| | | | | ||| | || Sbjct: 11319212 ggggctcaagtccactgcgggcctcccggtgaaccgccgctccagcagctcgagctttgg 11319271 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || ||||||||||| ||||||||||| Sbjct: 11319272 caacgtcagcaatggcggaaggatcagatgcatgcaggt 11319310 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 10080235 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 10080176 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || || |||||||||||||||||||| Sbjct: 10080175 caacgtcagcaatggcggcaggatcaggtgcatgcaggt 10080137
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 295 bits (149), Expect = 6e-77 Identities = 311/365 (85%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 156 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 215 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 82588 Query: 216 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 275 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 82589 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 82648 Query: 276 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 335 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 82649 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 82708 Query: 336 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 395 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 82709 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 82768 Query: 396 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 455 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 82769 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 82828 Query: 456 gcgag 460 ||||| Sbjct: 82829 gcgag 82833 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 |||||||||||||||||||||| | |||||| ||||||||| | | ||| |||| Sbjct: 82271 ggggctcaagtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcgg 82330 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || || |||||||||||||||||||| Sbjct: 82331 caacgtcagcaatggcggcaggatcaggtgcatgcaggt 82369
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 274 bits (138), Expect = 2e-70 Identities = 309/366 (84%) Strand = Plus / Minus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 110066 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 110007 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 110006 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 109947 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 109946 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 109887 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 109886 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 109827 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 109826 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 109767 Query: 455 tgcgag 460 |||||| Sbjct: 109766 tgcgag 109761 Score = 244 bits (123), Expect = 2e-61 Identities = 306/367 (83%) Strand = Plus / Minus Query: 94 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 153 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 154 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 213 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 95404 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 95345 Query: 214 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 273 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 95344 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 95285 Query: 274 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 333 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 95284 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 95225 Query: 334 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 393 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 95224 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 95165 Query: 394 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 453 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 95164 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 95105 Query: 454 ctgcgag 460 |||||| Sbjct: 95104 ttgcgag 95098 Score = 147 bits (74), Expect = 4e-32 Identities = 293/366 (80%) Strand = Plus / Minus Query: 95 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 154 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 52257 Query: 155 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 214 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 52256 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 52197 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 52196 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 52137 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 52136 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 52077 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 52076 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 52017 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 454 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 52016 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 51957 Query: 455 tgcgag 460 |||||| Sbjct: 51956 tgcgag 51951 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||| ||||||||||| |||||||||||||||||||| ||| | || ||||||| Sbjct: 95674 ggggctcaaatccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcgg 95615 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 ||||||||||||||||||||||||||| || |||||||| Sbjct: 95614 cagcgtcagcaacggtggaaggatcagctgtatgcaggt 95576 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 2 gggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggc 61 |||||||||||||||||||| |||||||||||||||||||| | | | || ||||| Sbjct: 110330 gggctcaagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggc 110271 Query: 62 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 | ||||||||| || |||||||||| |||||||||||| Sbjct: 110270 aacgtcagcaatggcggaaggatcaagtgcatgcaggt 110233 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 260 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 319 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 105350 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 105291 Query: 320 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 365 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 105290 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 105245 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctc 42 ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 107293 ggggctcaagtccaccgccggcctcccagtgagccgccgctc 107252 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || |||||||| || | ||||||||| | | | | ||| | || Sbjct: 52513 ggggctcaagtccactgcgggcctcccggtgaaccgccgctccagcagctcgagctttgg 52454 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||| || ||||||||||| ||||||||||| Sbjct: 52453 caacgtcagcaatggcggaaggatcagatgcatgcaggt 52415
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 226 bits (114), Expect = 5e-56 Identities = 290/346 (83%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 551 Query: 156 gcacggaggccctccttaagcaggtcgactacct-gatccgctccaagtgggtgccttgc 214 | ||||| |||||| |||||| |||| ||||| | |||| ||||||||| |||| ||| Sbjct: 552 ccgtggaggacctcctgaagcagatcgagtacctagctccgttccaagtgg-tgccctgc 610 Query: 215 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 274 ||||||||||||||||| || || ||| ||||||| || || || ||||| |||||| Sbjct: 611 ctcgagttcagcaaggtcggatttgtctaccgtgagaaccacaagtcccctggatactac 670 Query: 275 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 334 || ||| |||||||||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 671 gacggcaggtactggaccatgtggaagctgcccatgttcgggtgcaccgacgccacccag 730 Query: 335 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 394 || |||| ||| | ||||||| |||||||| ||||||||| || | ||||| |||||| Sbjct: 731 gtcgtcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatc 790 Query: 395 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 || ||||||||| | | ||||||||| | ||||||||||||||| Sbjct: 791 ggcttcgacaacgttaggcaggtgcagctcatcagcttcatcgcct 836 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gggctcaagtccaccgccggc 22 ||||||||||||||||||||| Sbjct: 311 gggctcaagtccaccgccggc 331 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aggatcaggtgcatgcaggt 99 |||||||||||||||||||| Sbjct: 384 aggatcaggtgcatgcaggt 403
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 198 bits (100), Expect = 1e-47 Identities = 370/460 (80%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || |||||||| || | ||||||||| | | | | ||| | || Sbjct: 115 ggggctcaagtccactgcgggcctcccggtgaaccgccgctccagcagctcgagctttgg 174 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 175 caacgtcagcaatggcggaaggatcagatgcatgcaggtgtggccgattgagggcattaa 234 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||| ||||| |||||||| ||| | | ||||| ||| | |||||| | Sbjct: 235 gaagttcgagactctgtcgtacttgccgccattgacagtggaggaccttttgaagcagat 294 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| || ||||||||||||||| | |||||||||||||| || ||| | Sbjct: 295 cgagtacctgctccgatctaagtgggtgccttgcttggagttcagcaaggtcggattcgt 354 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| | || ||| || || ||||| || || |||||||||| |||||||| Sbjct: 355 ctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgtggaa 414 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 ||||| ||||| ||||||||||| ||||| || |||||||| ||| | ||||||| || Sbjct: 415 actgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggaggcaaa 474 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| |||||||| || | || |||||||| || || |||||| | | |||||||| Sbjct: 475 gaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtgca 534 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 || ||||||||||||| | |||||||| || |||||| Sbjct: 535 gttaatcagcttcatcgcgtataagccaccgggttgcgag 574
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 198 bits (100), Expect = 1e-47 Identities = 370/460 (80%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||| || |||||||| || | ||||||||| | | | | ||| | || Sbjct: 117 ggggctcaagtccactgcgggcctcccggtgaaccgccgctccagcagctcgagctttgg 176 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || ||||||||| || ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 177 caacgtcagcaatggcggaaggatcagatgcatgcaggtgtggccgattgagggcattaa 236 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||| ||||| |||||||| ||| | | ||||| ||| | |||||| | Sbjct: 237 gaagttcgagactctgtcgtacttgccgccattgacagtggaggaccttttgaagcagat 296 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||| |||||| |||| || ||||||||||||||| | |||||||||||||| || ||| | Sbjct: 297 cgagtacctgctccgatctaagtgggtgccttgcttggagttcagcaaggtcggattcgt 356 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 || ||||||| | || ||| || || ||||| || || |||||||||| |||||||| Sbjct: 357 ctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgtggaa 416 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 ||||| ||||| ||||||||||| ||||| || |||||||| ||| | ||||||| || Sbjct: 417 actgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggaggcaaa 476 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 ||||| |||||||| || | || |||||||| || || |||||| | | |||||||| Sbjct: 477 gaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtgca 536 Query: 421 gtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 || ||||||||||||| | |||||||| || |||||| Sbjct: 537 gttaatcagcttcatcgcgtataagccaccgggttgcgag 576
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 145 bits (73), Expect = 1e-31 Identities = 354/447 (79%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 119 ggggctcaagtccaccgccagcctccccgtcgcccgccgctcctccaga---agcctcgg 175 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || |||||||||||| ||||||||| ||||||||||||||||||| | | |||| ||| Sbjct: 176 caacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacggcaacaa 235 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||| ||||| ||| |||| || || ||||| | ||| || |||||||| Sbjct: 236 gaagttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctgaagcaggt 295 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||||||| | ||| | ||| | || |||||||||||||||||||| || ||| | Sbjct: 296 ggactacctgctgcgcaacggctggataccctgcctcgagttcagcaaggtcggcttcgt 355 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 | ||| ||| || | | || || | |||||||| ||||| |||||||| |||||||| Sbjct: 356 gtaccgcgagaactccacctccccgtgctactacgacggccgctactggaccatgtggaa 415 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| |||| ||||||||| |||||| ||| ||| || |||||| || Sbjct: 416 gctgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcaggaggccat 475 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 || ||||| ||||| | |||| ||||||| ||||||||||| ||| ||| Sbjct: 476 caaatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaagcagacgca 535 Query: 421 gtgcgtcagcttcatcgccttcaagcc 447 |||||||||||||||||||| |||||| Sbjct: 536 gtgcgtcagcttcatcgcctacaagcc 562
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 145 bits (73), Expect = 1e-31 Identities = 354/447 (79%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 119 ggggctcaagtccaccgccagcctccccgtcgcccgccgctcctccaga---agcctcgg 175 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 120 || |||||||||||| ||||||||| ||||||||||||||||||| | | |||| ||| Sbjct: 176 caacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacggcaacaa 235 Query: 121 gaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggt 180 |||||||||||| ||||| ||| |||| || || ||||| | ||| || |||||||| Sbjct: 236 gaagttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctgaagcaggt 295 Query: 181 cgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcat 240 ||||||||| | ||| | ||| | || |||||||||||||||||||| || ||| | Sbjct: 296 ggactacctgctgcgcaacggctggataccctgcctcgagttcagcaaggtcggcttcgt 355 Query: 241 cttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaa 300 | ||| ||| || | | || || | |||||||| ||||| |||||||| |||||||| Sbjct: 356 gtaccgcgagaactccacctccccgtgctactacgacggccgctactggaccatgtggaa 415 Query: 301 gctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaa 360 |||||| |||||||| |||| ||||||||| |||||| ||| ||| || |||||| || Sbjct: 416 gctgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcaggaggccat 475 Query: 361 gaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgca 420 || ||||| ||||| | |||| ||||||| ||||||||||| ||| ||| Sbjct: 476 caaatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaagcagacgca 535 Query: 421 gtgcgtcagcttcatcgccttcaagcc 447 |||||||||||||||||||| |||||| Sbjct: 536 gtgcgtcagcttcatcgcctacaagcc 562
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 139 bits (70), Expect = 9e-30 Identities = 154/182 (84%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 417 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 476 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 || |||||| || |||||||||||| ||||||||||||||| |||| | || Sbjct: 477 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 536 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 ||||||||||| |||||||||| || |||||||||||| |||| |||||||||| |||| Sbjct: 537 cgcatcatcggcttcgacaacaaccgccaggtgcagtgcatcagtttcatcgcctacaag 596 Query: 446 cc 447 || Sbjct: 597 cc 598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 138 ||||||| |||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 137 bits (69), Expect = 4e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 203 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 262 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 286 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 345 Query: 263 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 322 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 346 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 405 Query: 323 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 382 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 406 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 465 Query: 383 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 442 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 466 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 525 Query: 443 aagcc 447 ||||| Sbjct: 526 aagcc 530 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 89 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 144 ||||||||||||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 137 bits (69), Expect = 4e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 203 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 262 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 271 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 330 Query: 263 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 322 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 331 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 390 Query: 323 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 382 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 391 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 450 Query: 383 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 442 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 451 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 510 Query: 443 aagcc 447 ||||| Sbjct: 511 aagcc 515
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 133 bits (67), Expect = 6e-28 Identities = 313/395 (79%) Strand = Plus / Plus Query: 53 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgag 112 |||||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | Sbjct: 288 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctac 347 Query: 113 ggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctt 172 |||| ||||||||||||||| ||||| ||| |||| || || ||||| | ||| || Sbjct: 348 ggcaacaagaagttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctg 407 Query: 173 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggtt 232 |||||||| ||||||||| | ||| | ||| | || |||||||||||||||||| | Sbjct: 408 aagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaagctc 467 Query: 233 gggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggaca 292 |||||| | | ||| ||| || | | || || | |||||||| ||||| |||||||| Sbjct: 468 gggttcgtgtaccgcgagaactccacctccccgtgctactacgacggccgctactggacc 527 Query: 293 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 352 |||||||||||||| |||||||| |||| ||||||||| |||||| ||| ||| || || Sbjct: 528 atgtggaagctgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcag 587 Query: 353 gaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgt 412 |||| || || ||||| ||||| | |||| ||||||| ||||||||||| Sbjct: 588 gaggccatcaaatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaag 647 Query: 413 caggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||| ||||||||||||||||||||||| |||||| Sbjct: 648 cagacgcagtgcgtcagcttcatcgcctacaagcc 682 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgc 40 ||||||||| ||||| ||||||||||| ||||||| Sbjct: 243 ctcaagtccgccgccagcctccccgtcgcccgccgc 278
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 2e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 428 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 487 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 488 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 547 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 548 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 607 Query: 446 cc 447 || Sbjct: 608 cc 609 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 67 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 126 ||||||||| || ||| | || ||||||||||||||||| |||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 127 cgagaccct 135 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 2e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 426 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 485 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 486 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 545 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 546 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 605 Query: 446 cc 447 || Sbjct: 606 cc 607 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 89 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 131 bits (66), Expect = 2e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 447 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 506 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 507 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 566 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 567 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 626 Query: 446 cc 447 || Sbjct: 627 cc 628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 67 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 126 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 127 cgagaccct 135 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 131 bits (66), Expect = 2e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 423 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 482 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 483 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 542 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 543 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 602 Query: 446 cc 447 || Sbjct: 603 cc 604 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 67 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 126 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 127 cgagaccct 135 ||||||||| Sbjct: 207 cgagaccct 215
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 129 bits (65), Expect = 9e-27 Identities = 145/169 (85%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 161 gaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgag 220 ||||||||||| |||||| |||||| ||||||||||||| ||||| || ||| | ||| Sbjct: 28 gaggccctcctgaagcagatcgactttttgatccgctccaaatgggttccctgcttggag 87 Query: 221 ttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactacgatgg 279 |||||||||||||| ||||||||||||||| | | ||| |||| || |||||||| || Sbjct: 88 ttcagcaaggttggcttcatcttccgtgagttcggcagca-ctcccggatactacgacgg 146 Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 | ||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 147 caggtactggacaatgtggaagctgcccatgttcggctgcactgacgcc 195
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 123 bits (62), Expect = 5e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 282 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 341 |||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||| || Sbjct: 416 ggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccaggttgtcg 475 Query: 342 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 401 |||| | ||||||| ||||||| ||||| | || | |||||||| |||||||||| Sbjct: 476 ccgagctcgaggaggctaagaaggcttacccacatgctttcgtccgcattatcggattcg 535 Query: 402 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||| | ||||| ||||||||||||||||||||||||| |||||| Sbjct: 536 acaacgtccgtcaagtgcagtgcgtcagcttcatcgcctacaagcc 581
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || |||||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 404 gggtactacgacgggaggtactggacgatgtggaagttgcccatgttcggctgcaccgac 463 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 464 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 523 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 524 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 583 Query: 446 cc 447 || Sbjct: 584 cc 585 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 89 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 101 bits (51), Expect = 2e-18 Identities = 171/211 (81%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||| ||||| ||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 349 ccgtgagaacaacagatccccaggatactatgatggaaggtactggacaatgtggaagct 408 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 ||| |||||||||||||||||| | | |||||| | || ||| |||| |||| |||||| Sbjct: 409 gcccatgttcggatgcaccgactcttcccaggtgttgaaagagctggaagaggccaagaa 468 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 || ||||| | | | |||| ||||||||||||||||| | ||||| |||||||| Sbjct: 469 ggcctacccccaatccttcatccgtatcatcggattcgacaatgtccgtcaagtgcagtg 528 Query: 424 cgtcagcttcatcgccttcaagccaccaggc 454 | |||| |||||||| | |||||| |||||| Sbjct: 529 catcagtttcatcgcttacaagcctccaggc 559 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 ||||||||||||||||| |||||| Sbjct: 221 aagaagttcgagaccctctcttac 244
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 2349 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 2408 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| || ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 2409 tcccaggtggtcgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 2468 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 |||||||||||||||||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 2469 atcatcggattcgacaacgtgcgtcaagtacagtgtatcagtttcatcgcctacaagcc 2527
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 97.6 bits (49), Expect = 3e-17 Identities = 151/185 (81%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||| || || || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 392 gggtactatgacggacgttactggacaatgtggaagctgcccatgtttggatgcactgat 451 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 | | |||||| | || || || |||||| ||||||||||||||| | || || || Sbjct: 452 tcatctcaggtgttgaaagaagtagaggagtgcaagaaggagtacccaaatgcatacatc 511 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 || || || |||||||||||| | ||||| ||||||||| |||| ||||| ||||||||| Sbjct: 512 cgaattattggattcgacaacgtccgtcaagtgcagtgcatcagtttcattgccttcaag 571 Query: 446 ccacc 450 ||||| Sbjct: 572 ccacc 576 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||||||| ||||||||| | |||| ||||| Sbjct: 242 aagaagttcgagactctgtcttacctcccacaactca 278
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatggacggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 363 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 419 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| ||| || || ||||| ||||| || |||||||| ||||||||| | Sbjct: 379 ccgtgagcacaacaaatcgccaggatactatgatggtcgctactggactatgtggaagtt 438 Query: 304 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 363 |||||||||||| ||||| ||| | | |||||| | || ||||| |||||||||||||| Sbjct: 439 gcctatgttcgggtgcactgacccagctcaggtggtgaatgaggttgaggaggtcaagaa 498 Query: 364 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 423 || |||||||| || | ||| | ||||| || |||||||||| ||||| ||||| || Sbjct: 499 ggcttaccctgatgcttttgttaggatcattgggttcgacaacaaacgtcaagtgcaatg 558 Query: 424 cgtcagcttcatcgccttcaagcc 447 | | || ||||| |||| |||||| Sbjct: 559 cattagtttcattgcctacaagcc 582 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttacttgccaccactca 155 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 251 aagaagttcgagaccctctcttaccttccacctctca 287
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 95.6 bits (48), Expect = 1e-16 Identities = 156/192 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 632 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaccgacgcc 691 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 || |||||| ||| ||| || |||||| || | |||||| ||||| | |||| Sbjct: 692 acgcaggtgtacaaggagctgcaggaggccatcgccgcgtacccggacgccttccaccgc 751 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||| ||||||||| | | ||| ||||||||||||||||||||||| |||||| Sbjct: 752 gtcatcggcttcgacaacgtcaggcagacgcagtgcgtcagcttcatcgcctacaagccc 811 Query: 449 ccaggctgcgag 460 || ||| ||||| Sbjct: 812 cccggcagcgag 823 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 53 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 298 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggt 344 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 5 ctcaagtccaccgccggcctccccgtcagccgccgc 40 ||||||||| ||||| ||||||||||| ||||||| Sbjct: 253 ctcaagtccgccgccagcctccccgtcgcccgccgc 288
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 406 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 465 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 466 tcccaggtgttgaaggagctggaagaggccaagaaggcttacccccagtccttcatccgt 525 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 526 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 584 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 ||||||||||||||||| |||||| Sbjct: 253 aagaagttcgagaccctctcttac 276
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 410 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 469 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 470 tcccaggtgttgaaagagctggaagaggccaagaaggcctacccccaatccttcatccgt 529 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 530 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 588 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 ||||||||||||||||| |||||| Sbjct: 257 aagaagttcgagaccctctcttac 280
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 380 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 439 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 440 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 499 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 500 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 558 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 |||||||||||||| ||||||||| Sbjct: 227 aagaagttcgagactctgtcttac 250
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || || |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 383 gggtactacgacgggcgctactggaccatgtggaagttgcccatgttcgggtgcaccgac 442 Query: 326 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 385 || | ||||||||||| |||||||| ||| || |||| |||||| ||| | | Sbjct: 443 tcctcccaggtgctcaaggaggtggacgagtgcagtaaggcgtaccccgactacttcaac 502 Query: 386 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 445 || |||||||| |||||||||| ||| || ||||||||| |||||||| || ||| |||| Sbjct: 503 cggatcatcggcttcgacaacacgcgccaagtgcagtgcatcagcttcctcacctacaag 562 Query: 446 cc 447 || Sbjct: 563 cc 564 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 87 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgc 146 ||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 147 caccactca 155 ||||||||| Sbjct: 264 caccactca 272
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 89.7 bits (45), Expect = 7e-15 Identities = 156/193 (80%) Strand = Plus / Plus Query: 263 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 322 ||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |||| Sbjct: 372 cctggatactatgatggacgctactggaccatgtggaagctgcctatgtttgggtgcagt 431 Query: 323 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 382 || || |||||||| | || ||| | |||||| ||||||||| ||||| || | Sbjct: 432 gatgcttcacaggtgatgaaggagcttgaggagtgcaagaaggaataccccactgctttc 491 Query: 383 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 442 ||||| ||||| ||||||||||||| ||||| || |||||| |||| ||||| |||| | Sbjct: 492 gtccgaatcattggattcgacaacaaacgtcaagttcagtgcatcagtttcattgcctac 551 Query: 443 aagccaccaggct 455 ||||||||||||| Sbjct: 552 aagccaccaggct 564 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttacttgccaccactc 154 |||||||||||||| || || ||| ||||||||||| Sbjct: 225 aagaagttcgagactctttcctacctgccaccactc 260
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 89.7 bits (45), Expect = 7e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 89.7 bits (45), Expect = 7e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 412 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgag 460 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgag 49
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgttgaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 358 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 414 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 357 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 413 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.2 mRNA, complete cds Length = 871 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 367 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 426 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 427 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 486 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 487 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 546 Query: 449 cca 451 ||| Sbjct: 547 cca 549
>ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.1 mRNA, complete cds Length = 878 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 449 cca 451 ||| Sbjct: 554 cca 556
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 78365 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 78306 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 78305 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 78246 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 78245 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 78186 Query: 449 cca 451 ||| Sbjct: 78185 cca 78183
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1751 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 1810 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| | || || || || || ||||||||||||||| | ||| | | | Sbjct: 1811 gctcaggtgttgaaggaagttgaagaatgcaagaaggagtacccgggcgccttcattagg 1870 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 1871 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 1929
>gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 449 cca 451 ||| Sbjct: 526 cca 528
>gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 543 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 449 cca 451 ||| Sbjct: 526 cca 528
>gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 449 cca 451 ||| Sbjct: 526 cca 528
>gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 617 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 368 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 427 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 428 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 487 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 488 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 547 Query: 449 cca 451 ||| Sbjct: 548 cca 550
>gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 772 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 449 cca 451 ||| Sbjct: 552 cca 554
>gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 750 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 449 cca 451 ||| Sbjct: 552 cca 554
>gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 721 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 449 cca 451 ||| Sbjct: 555 cca 557
>gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 788 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 449 cca 451 ||| Sbjct: 552 cca 554
>gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 711 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 449 cca 451 ||| Sbjct: 554 cca 556
>gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 702 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 449 cca 451 ||| Sbjct: 555 cca 557
>gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 752 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 449 cca 451 ||| Sbjct: 553 cca 555
>gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds Length = 3162 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 449 cca 451 ||| Sbjct: 554 cca 556
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2254 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2195 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2194 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2135 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 2134 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 2075 Query: 449 cca 451 ||| Sbjct: 2074 cca 2072
>gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete cds Length = 754 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 449 cca 451 ||| Sbjct: 553 cca 555
>gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 632 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 197 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 256 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 257 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 316 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 317 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 376 Query: 449 cca 451 ||| Sbjct: 377 cca 379
>emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 449 cca 451 ||| Sbjct: 532 cca 534
>emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 449 cca 451 ||| Sbjct: 532 cca 534
>emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 697 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 314 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 373 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 374 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 433 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 434 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 493 Query: 449 cca 451 ||| Sbjct: 494 cca 496
>emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 347 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 406 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 407 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 466 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 467 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 526 Query: 449 cca 451 ||| Sbjct: 527 cca 529
>gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds Length = 825 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 449 cca 451 ||| Sbjct: 553 cca 555
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 969 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 1028 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 || |||||| ||| ||| || |||||| || || ||||| ||||| | |||| Sbjct: 1029 acccaggtgtacaaggagctgcaggaggccatcaaatcctacccggacgccttccaccgc 1088 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 1089 gtcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 1147 Score = 81.8 bits (41), Expect = 2e-12 Identities = 85/99 (85%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 544 ggggctcaagtccaccgccagcctccccgtcgcccgccgctcctccaga---agcctcgg 600 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || |||||||||||| ||||||||| ||||||||||||| Sbjct: 601 caacgtcagcaacggcggaaggatccggtgcatgcaggt 639
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 282 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 341 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 342 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 401 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 402 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||| || | |||||||| ||||||| |||||| |||||||||| ||||||||||| Sbjct: 972 ccgtgagtaccatgcatctccaaggtactatgatggcaggtactggaccatgtggaagct 1031 Query: 304 gcctatgttcggatgcaccgacgccac 330 ||| |||||||| |||||||| ||||| Sbjct: 1032 gcccatgttcgggtgcaccgatgccac 1058 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||| |||||||||||| ||||||| ||||| ||| |||| ||||| |||| |||||| Sbjct: 1117 atcattggattcgacaacgtgcgtcaagtgcaatgcatcagtttcattgcctacaagccc 1176 Query: 449 ccaggct 455 ||||||| Sbjct: 1177 ccaggct 1183
>gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 1e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 449 cca 451 ||| Sbjct: 526 cca 528
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgc 327 |||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1582 tactacgacggccggtactggaccatgtggaagctgcccatgttcggctgcaccgacgc 1640 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 1 ggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcgg 60 ||||||||||||||||||| ||||||||||| ||| ||||| | | | ||||||| Sbjct: 1222 ggggctcaagtccaccgccagcctccccgtcgcccgacgctccacca---ccagcctcgc 1278 Query: 61 cagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 || ||||||||||| ||||||||| ||||||||||||| Sbjct: 1279 caaagtcagcaacggcggaaggatccggtgcatgcaggt 1317 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 173 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaagg 230 |||||||| ||||||||| | ||| ||| |||||||| ||||||||||||||||||| Sbjct: 1486 aagcaggtggactacctgctgcgcaacaactgggtgccctgcctcgagttcagcaagg 1543
>emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) Length = 9647 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 9047 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 9106 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || ||||| || || ||||||||||||||| | ||| | | | Sbjct: 9107 gctcaagtgttgaaggaggttgaagaatgcaagaaggagtacccgggcgccttcattagg 9166 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 9167 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 9225 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2200 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 2256 Score = 69.9 bits (35), Expect = 7e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 5348 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 5407 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 5408 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 5467 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 5468 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 5526 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| |||||| Sbjct: 2320 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcc 2378
>gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene, complete cds Length = 2293 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 282 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 341 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 342 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 401 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 402 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 373 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 432 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 433 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 492 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 493 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 551
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 7511 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 7570 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 7571 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 7630 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 7631 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 7689 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 3529 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 3588 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 3589 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 3648 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 3649 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 3707 Score = 71.9 bits (36), Expect = 2e-09 Identities = 132/164 (80%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||||||||||||| |||| |||||||| ||||| ||| | | ||||| | Sbjct: 1178 tactggacaatgtggaagttgcccatgttcggttgcactgacccatcccaggttgttgct 1237 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | ||||||| |||||||| |||||||| || | |||| ||||||||||||||| Sbjct: 1238 gagctcgaggaggccaagaaggcttaccctgaggccttcatccgtatcatcggattcgac 1297 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 1298 aacgtgcgtcaagtccagtgtatcagtttcatcgcctacaagcc 1341 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 |||||||||||||| ||||||||| Sbjct: 895 aagaagttcgagactctgtcttac 918
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 1862 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 1921 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | |||||| | ||| | ||||||| |||||||| |||||||| || | ||| Sbjct: 1922 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcacccgt 1981 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 1982 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 2040 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aagaagttcgagaccctgtcttac 142 |||||||||||||| ||||||||| Sbjct: 1499 aagaagttcgagactctgtcttac 1522
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 312 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 312 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 312 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525
>gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds Length = 212 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 257 gcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgga 316 |||||||| |||||||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 4 gcatctccagggtactatgatggcaggtactggaccatgtggaagctgcccatgttcggg 63 Query: 317 tgcaccgacgccac 330 ||||| || ||||| Sbjct: 64 tgcactgatgccac 77
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 375 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 431
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 435 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 491
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 399 tactggacaatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 458 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 459 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 518 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 519 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 555
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 398 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 454
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 81.8 bits (41), Expect = 2e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1808 tactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttggct 1867 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 |||||||| |||| ||||||| ||||| | || | |||| ||||| ||||||||| Sbjct: 1868 gaggtggaagaggcgaagaaggcatacccacaggcctggatccgtatcattggattcgac 1927 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1928 aacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1972
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 81.8 bits (41), Expect = 2e-12 Identities = 155/193 (80%) Strand = Plus / Plus Query: 263 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 322 ||||| ||||| || || || |||||||||||||||||||| || ||||||||||||||| Sbjct: 373 cctggatactatgacggacgctactggacaatgtggaagctacccatgttcggatgcacc 432 Query: 323 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 382 || |||| || || | ||| |||||||| ||||||||| ||||| |||| | Sbjct: 433 gatgccagccaagtcattgctgagctggaggagtgcaagaaggaataccccaacgcctgg 492 Query: 383 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 442 ||| | |||||||| ||||||||| | || || || |||||| |||| ||||| |||| | Sbjct: 493 gtcaggatcatcggcttcgacaacgttcgccaagtccagtgcatcagtttcattgcctcc 552 Query: 443 aagccaccaggct 455 ||||||||||||| Sbjct: 553 aagccaccaggct 565 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 180 tcgactacctgatccgctccaagtgggtgccttgcctcgagttc 223 |||||||||| |||||||||||||| | |||||||| |||||| Sbjct: 287 tcgactaccttctccgctccaagtggattccttgccttgagttc 330
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 21 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 77
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 389 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 445
>gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 652 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 372 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 428
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacgatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 373 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 429
>emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 355 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 411
>emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 79 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 135
>emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 385 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 441
>emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 706 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 374 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 430
>emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 368 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 424
>emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 440
>emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 379 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 435
>gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676) Length = 1794 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 392 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 448
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10 Length = 83646 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 57682 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 57626 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 50833 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 50777 Score = 69.9 bits (35), Expect = 7e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 54535 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 54476 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 54475 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 54416 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 54415 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 54357
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 479 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 535 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 81.8 bits (41), Expect = 2e-12 Identities = 54/57 (94%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgt-gaagctgcccatgttcgg 538 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 144 |||| |||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccctctcctactt 292
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 259 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 385 atctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 441 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 444 agccaccaggct 455 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 304 gcctatgttcggatgcac 321 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 444 agccaccaggct 455 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 304 gcctatgttcggatgcac 321 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 444 agccaccaggct 455 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 304 gcctatgttcggatgcac 321 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 492 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 551 Query: 444 agccaccaggct 455 |||| ||||||| Sbjct: 552 agcccccaggct 563 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 352 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 411 Query: 304 gcctatgttcggatgcac 321 ||||||||| || ||||| Sbjct: 412 gcctatgtttggttgcac 429
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 260 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 315 |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 362 tctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 417 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 88 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 135 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene) Length = 459 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 393 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 451 ||||||||||||||| |||||| ||||||||| |||| |||||||||| |||||||||| Sbjct: 401 tcggattcgacaacaagcgtcaagtgcagtgcatcagtttcatcgcctacaagccacca 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||||||||| || |||| ||||||||| Sbjct: 292 tactggacaatgtggaagcttcccatgtacggatgcac 329
>emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate carboxylase small subunit (EC 4.1.1.39) Length = 2821 Score = 77.8 bits (39), Expect = 3e-11 Identities = 147/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2319 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2378 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2379 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2438 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| ||| | |||| ||||||| Sbjct: 2439 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcgttgcctacaagcca 2498 Query: 449 cca 451 ||| Sbjct: 2499 cca 2501
>gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 77.8 bits (39), Expect = 3e-11 Identities = 147/183 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattaga 465 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 || |||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 ataatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 449 cca 451 ||| Sbjct: 526 cca 528
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 77.8 bits (39), Expect = 3e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || ||||||||||||||||||||||| |||| || ||||| || || Sbjct: 184 tactacgatggacgctactggacaatgtggaagctgcccatgtatgggtgcacagatgca 243 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 || ||||| | || ||||| | ||||||| ||||||| ||||| | | | ||||| Sbjct: 244 acccaggttttgaaggaggttggggaggtccagaaggaatacccacattcattcgtccga 303 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 435 || |||||||| ||||||| |||||| ||||||||| |||| ||||| Sbjct: 304 attatcggatttgacaacaagcgtcaagtgcagtgcatcagtttcat 350
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| |||||||| |||||| |||| |||||||||| ||||||| Sbjct: 1454 atcatcggattcgacaacaaccgtcaggtccagtgcatcagtttcatcgcctacaagcca 1513 Query: 449 cca 451 ||| Sbjct: 1514 cca 1516 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 1334 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 1386
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||||||||| || ||||||||||||||||||||||| ||||| || ||||| || || Sbjct: 199 tactacgatggacgctactggacaatgtggaagctgcccatgtttgggtgcacagatgca 258 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaagga 366 |||||||| | || ||||| | ||||||| ||||||| Sbjct: 259 acacaggttttgaaggaggttggggaggtccagaagga 296
>gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate carboxylase/oxygenase small subunit mRNA, complete cds Length = 543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 248 gagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcct 307 ||||||||| |||||| || |||||||| || |||||||||| |||||||||||||| Sbjct: 337 gagcacaacagatctccaggatactacgacggaaggtactggaccatgtggaagctgccc 396 Query: 308 atgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggag 367 |||||||| ||||| ||| | | |||||| | || |||||| | || | || || |||| Sbjct: 397 atgttcgggtgcactgactcagcccaggtgattaaggaggtgcaagaagccaggacggag 456 Query: 368 taccctgacgcgtatgtccgcatcatcggattcgacaa 405 |||||| |||| | |||| ||||||||||||||||| Sbjct: 457 taccctaacgcccacatccgaatcatcggattcgacaa 494
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 358 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 417 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaagt 353 Query: 418 gcagtgcgtcagcttcat 435 ||| |||||||| ||||| Sbjct: 354 gcaatgcgtcagtttcat 371
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 46.1 bits (23), Expect = 0.10 Identities = 68/83 (81%) Strand = Plus / Plus Query: 358 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 417 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaagt 353 Query: 418 gcagtgcgtcagcttcatcgcct 440 ||| ||| |||| ||||| |||| Sbjct: 354 gcaatgcatcagtttcattgcct 376
>emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 322 ||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcacc 437 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 504 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 562
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 379 tactggacaatgtggaagttgcctatgttcggatgcaccgac 420
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 364 tactggacaatgtggaagttgcctatgttcggatgcaccgac 405 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 358 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 417 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 438 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgtccgtcaagt 497 Query: 418 gcagtgcgtcagcttcat 435 ||| ||| |||| ||||| Sbjct: 498 gcaatgcatcagtttcat 515
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 367 tactggacaatgtggaagttgcctatgttcggatgcaccgac 408
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 396 tactggacaatgtggaagttgcctatgttcggatgcaccgac 437
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 381 tactggacaatgtggaagttgcctatgttcggatgcaccgac 422
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 393 tactggacaatgtggaagttgcctatgttcggatgcaccgac 434 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 358 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 417 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 467 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgttcgtcaagt 526 Query: 418 gcagtgcgtcagcttcatcgccttcaagcca 448 |||||| |||| |||||||| | ||||||| Sbjct: 527 tcagtgcatcagtttcatcgcttccaagcca 557
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 527 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 586 Query: 444 agcca 448 ||||| Sbjct: 587 agcca 591 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 412 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 471 Query: 329 ac 330 || Sbjct: 472 ac 473
>emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 203 tactacgatggacggtactggacaatgtggaggcttccattgttcggatgcaccgac 259
>emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 172 tactacgatggacggtactggacaatgtggaagcttccatttttcggatgcaccgac 228
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||||||||| |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 407 tactacgatggccgatactggaccatgtggaagttgcccatgttcgggtgcaccgac 463
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 1774 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 1833 Query: 344 gaggt 348 ||||| Sbjct: 1834 gaggt 1838 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 1879 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 1938
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 377 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 429 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 ||||||||||||||||||| ||||| || |||||| |||| |||||||||| ||||||| Sbjct: 497 atcatcggattcgacaacaaccgtcaagtccagtgcatcagtttcatcgcctacaagcca 556 Query: 449 cca 451 ||| Sbjct: 557 cca 559
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 73.8 bits (37), Expect = 4e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 371 tactggacgatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 430 Query: 344 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 403 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 431 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 490 Query: 404 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 440 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 491 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 527
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 343 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 344 gaggt 348 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 448 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 185 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 244 Query: 444 agcca 448 ||||| Sbjct: 245 agcca 249 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 70 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 129 Query: 329 ac 330 || Sbjct: 130 ac 131
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 462 tactacgatgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 518
>gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 562 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||| ||||| || |||||| |||||||||||||| ||||| ||||||||||| Sbjct: 356 gggtactatgatggacgttactgggtgatgtggaagctgcccatgtttggatgcaccgat 415 Query: 326 gccacacaggtg 337 |||||||||||| Sbjct: 416 gccacacaggtg 427 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 435 |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||| Sbjct: 474 tccgaatcatcggattcgacaacaagcgtcaagtgcagtgcatcagtttcat 525
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 96 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 155 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 232 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 57 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 99 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 31 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 410
>gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 793 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 396 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 451
>gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 811 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 410
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 992 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1051 Query: 444 agcc 447 |||| Sbjct: 1052 agcc 1055 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 263 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 ||||| ||||| ||||| || |||||||| ||||||||||||||| |||| || ||||| Sbjct: 871 cctggatactatgatggacgctactggaccatgtggaagctgcctgtgtttggctgcac 929
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1012 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1071 Query: 444 agcc 447 |||| Sbjct: 1072 agcc 1075 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 244 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 303 ||||||||||||| || || || ||||||||||| || | |||||| ||||||||||| Sbjct: 872 ccgtgagcacaacaggtcaccaggatactacgatggacgctgctggaccatgtggaagct 931 Query: 304 gcctatgttcggatgcac 321 ||||||||| || ||||| Sbjct: 932 gcctatgtttggttgcac 949
>emb|X17546.1|EGRBCS Euglena gracilis rbcS mRNA for the small subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase (EC 4.1.1.39) Length = 4300 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3679 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3738 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2818 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2877 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2383 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2442 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1954 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2013 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 661 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 720 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcca 329 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1093 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgcca 1142 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3251 tactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3306 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 284 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1526 tactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 1581
>emb|X79152.1|EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19 Length = 4446 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3768 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3827 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3336 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3395 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2472 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2531 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2040 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2099 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1608 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 1667 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 744 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 803 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcca 329 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1176 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgcca 1225 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 280 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 339 |||||||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||| Sbjct: 2904 ccggtactggaccatgtggaagctgcccatgtttggctgcacggacgccagccaggtgct 2963
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1663 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1722 Query: 444 agcc 447 |||| Sbjct: 1723 agcc 1726 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 ||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 1548 tactacgatggacgctactggaccatgtggaagctgcctatgtttggttgcac 1600
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 443 |||| |||||||||||||||||| ||||||| ||||| || ||||| |||||||||| || Sbjct: 2584 tccgtatcatcggattcgacaacgtgcgtcaagtgcaatgtgtcagtttcatcgcctaca 2643 Query: 444 agcc 447 |||| Sbjct: 2644 agcc 2647 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 321 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| Sbjct: 2469 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcac 2521
>dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase, complete cds Length = 789 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 266 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 325 |||||||| ||||| || |||||| |||||||||||||| ||||| ||||||||||| Sbjct: 392 gggtactatgatggacgttactgggtgatgtggaagctgcccatgtttggatgcaccgat 451 Query: 326 gccacacaggtg 337 |||||||||||| Sbjct: 452 gccacacaggtg 463 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 384 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 435 |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||| Sbjct: 510 tccgaatcatcggattcgacaacaagcgtcaagtgcagtgcatcagtttcat 561
>ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420 mRNA, complete cds Length = 837 Score = 69.9 bits (35), Expect = 7e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 397 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 456 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 457 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 516 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 517 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 575
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 69.9 bits (35), Expect = 7e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 269 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 328 |||||||||||| | |||||||| ||||||||| |||| |||||||| ||||| || || Sbjct: 938 tactacgatggcagatactggaccatgtggaagttgcccatgttcgggtgcactgatgca 997 Query: 329 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 388 || ||||| | |||||| |||||| ||||||| ||||| | || | ||||| Sbjct: 998 acccaggtcttggctgaggtgcaggaggcaaagaaggcttacccacaggcatgggtccgt 1057 Query: 389 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 447 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 1058 atcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgcttacaagcc 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 68 agcaacggtggaaggatcaggtgcatgcaggtgtggcc 105 |||||||||||||| |||| ||||||||||||||||| Sbjct: 734 agcaacggtggaagagtcagttgcatgcaggtgtggcc 771 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,178,416 Number of Sequences: 3902068 Number of extensions: 3178416 Number of successful extensions: 65078 Number of sequences better than 10.0: 408 Number of HSP's better than 10.0 without gapping: 408 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63744 Number of HSP's gapped (non-prelim): 1230 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)