ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4g05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1027 bits (518), Expect = 0.0 Identities = 531/534 (99%), Gaps = 1/534 (0%) Strand = Plus / Plus Query: 10 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 989 Query: 70 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 1049 Query: 130 cggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagat 189 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1050 cggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagat 1109 Query: 190 cgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgta 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 cgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgta 1169 Query: 250 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 1229 Query: 310 ggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagct 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 ggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagct 1289 Query: 370 gctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 gctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgc 1349 Query: 430 tgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactgg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 tgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactgg 1409 Query: 490 ttccttctacggttagaaaattctccatac-acacccaccatctcttgctgcat 542 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1410 ttccttctacggttagaaaattctccatacaacacccaccatctcttgctgcat 1463
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 961 bits (485), Expect = 0.0 Identities = 491/493 (99%) Strand = Plus / Plus Query: 10 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 734 Query: 70 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 794 Query: 130 cggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagat 189 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 795 cggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagat 854 Query: 190 cgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgta 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgta 914 Query: 250 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 974 Query: 310 ggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagct 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagct 1034 Query: 370 gctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 gctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgc 1094 Query: 430 tgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactgg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 tgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactgg 1154 Query: 490 ttccttctacggt 502 ||||||||||||| Sbjct: 1155 ttccttctacggt 1167
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 894 bits (451), Expect = 0.0 Identities = 514/535 (96%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| Sbjct: 848 gaggagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcc 907 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 908 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgt 967 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 968 atcggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaag 1027 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1028 atcgtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtg 1087 Query: 248 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 307 |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 1088 tacgacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaag 1147 Query: 308 ctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaag 367 |||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1148 ctggtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaag 1207 Query: 368 ctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagctt 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1208 ctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagctt 1267 Query: 428 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 1327 Query: 488 ggttccttctacggttagaaaattctccatacacacccaccatctcttgctgcat 542 ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1328 ggtaccttctacggttagaacattctccatacacacccaccatctcttgctgcat 1382
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 888 bits (448), Expect = 0.0 Identities = 511/532 (96%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 1 gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 190 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180 Query: 191 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 250 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240 Query: 251 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 310 ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300 Query: 311 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 370 ||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360 Query: 371 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420 Query: 431 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 480 Query: 491 tccttctacggttagaaaattctccatacacacccaccatctcttgctgcat 542 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 481 accttctacggttagaacattctccatacacacccaccatctcttgctgcat 532
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 692 bits (349), Expect = 0.0 Identities = 489/535 (91%), Gaps = 2/535 (0%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||||||||||||||| |||||| |||||||||| ||||| ||||||||||| ||||| Sbjct: 859 gaggagaacccccgtgtccccatcatcgtcaccggcaacgacttctcgacgctgtacgcg 918 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| |||||||||||||||||||||||||| |||||||| || |||||| Sbjct: 919 cccctcatccgtgacggtcgtatggagaagttctactgggcgcccacccgcgaggaccgt 978 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 979 atcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaag 1038 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 1039 atcgtcgacacnttcccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtg 1098 Query: 248 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 307 ||||||| |||||||||||||||||| || |||||||| |||||||| ||||||||| Sbjct: 1099 tacgacgttgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagagg 1158 Query: 308 ctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaag 367 |||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||| Sbjct: 1159 ctggtgaactcgcgggacggacccgtcaccttcgagcagcccaagatgacggtggagaag 1218 Query: 368 ctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagctt 427 |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1219 ttgctggagtacggccacatgcttgtccaggagcaggacaatgtcaagcgtgtgcagctt 1278 Query: 428 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 487 || ||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 1279 gcggacacttacatgagccaggcagctctgggtgatgcgaacaaggatgccatgaagact 1338 Query: 488 ggttccttctacggttagaaaattctccatacacacccaccatctcttgctgcat 542 |||||||||||||||||||| | ||| ||| ||||||||||||||||||||||| Sbjct: 1339 ggttccttctacggttagaacactcttcat--acacccaccatctcttgctgcat 1391
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 644 bits (325), Expect = 0.0 Identities = 325/325 (100%) Strand = Plus / Plus Query: 218 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 278 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 458 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320 Query: 518 acacacccaccatctcttgctgcat 542 ||||||||||||||||||||||||| Sbjct: 7321 acacacccaccatctcttgctgcat 7345 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Plus Query: 10 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6672 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 6731 Query: 70 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6732 tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 6791 Query: 130 cggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagat 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6792 cggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagat 6851 Query: 190 cgtcgacaccttcccaggacaatccattg 218 ||||||||||||||||||||||||||||| Sbjct: 6852 cgtcgacaccttcccaggacaatccattg 6880 Score = 218 bits (110), Expect = 1e-53 Identities = 230/270 (85%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 |||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||| Sbjct: 3543 gaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgct 3602 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 3603 cccctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcgaggaccgc 3662 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| || |||||||| ||||||| |||||||| ||| |||||| | || || | | Sbjct: 3663 atcggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgtggtgagg 3722 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 | || ||||||||||| || || ||||| ||||| ||||| || ||||| || |||||| Sbjct: 3723 ctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtg 3782 Query: 248 tacgacgatgaggtgcgcaagtgggtcggc 277 |||||||| ||||||||||||||||||||| Sbjct: 3783 tacgacgacgaggtgcgcaagtgggtcggc 3812 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 398 gagcaggacaatgtcaagcgtgtgcagct 426 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 618 bits (312), Expect = e-174 Identities = 449/495 (90%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||||||||||||||| ||||| | |||||||| ||||| || |||||||| ||||| Sbjct: 869 gaggagaacccccgtgttcccattatngtcaccggcaacgacttttcgacgctgtacgcc 928 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || || | ||| ||||||||||||||||| |||||||| |||||||| || |||||| Sbjct: 929 ccccttattcctgacggtcgtatggagaagttttactgggcgcccacccgcgaggaccgt 988 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 989 atcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaag 1048 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 1049 atcgtcgacaccttcccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtg 1108 Query: 248 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 307 |||||||| ||||||||||||||||| || |||||||| |||||||| ||||||||| Sbjct: 1109 tacgacgacgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagagg 1168 Query: 308 ctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaag 367 |||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||| Sbjct: 1169 ctggtgaactcgcgggacggacccgtcaccttcgagcagcccaagatgacggtggagaag 1228 Query: 368 ctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagctt 427 |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1229 ttgctggagtacggccacatgcttgtccaggagcaggacaatgtcaagcgtgtgcagctt 1288 Query: 428 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 487 || ||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 1289 gcggacacttacatgagccaggcagctctgggtgatgcgaacaaggatgccatgaagact 1348 Query: 488 ggttccttctacggt 502 ||||||||||||||| Sbjct: 1349 ggttccttctacggt 1363
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 521 bits (263), Expect = e-145 Identities = 296/307 (96%) Strand = Plus / Plus Query: 218 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 277 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 278 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 337 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 458 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 517 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301 Query: 518 acacacc 524 ||||||| Sbjct: 302 acacacc 308
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 821 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 880 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 881 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 940 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 941 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1000 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1001 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1060 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1061 tacgacgacgaggtgcgcaagtgggt 1086 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 816 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 875 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 876 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 935 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 936 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 995 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 996 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1055 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1056 tacgacgacgaggtgcgcaagtgggt 1081 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 470 caggatgcgatgaagactggttccttctacgg 501 || || ||||||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 70 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 129 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 189 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 190 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 249 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 250 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 309 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 310 tacgacgacgaggtgcgcaagtgggt 335 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 864 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 923 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 924 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 983 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 984 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1043 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1044 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1103 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1104 tacgacgacgaggtgcgcaagtgggt 1129 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 815 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 874 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 875 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 934 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 935 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 994 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 995 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1054 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1055 tacgacgacgaggtgcgcaagtgggt 1080 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 853 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 912 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 913 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 972 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 973 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1032 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1033 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1092 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1093 tacgacgacgaggtgcgcaagtgggt 1118 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 852 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 911 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 912 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 971 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 972 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1031 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1032 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1091 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1092 tacgacgacgaggtgcgcaagtgggt 1117 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 636 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 695 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 696 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 755 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 756 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 815 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 816 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 875 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 876 tacgacgacgaggtgcgcaagtgggt 901 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 857 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 916 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 917 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 976 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 977 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1036 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1037 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1096 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1097 tacgacgacgaggtgcgcaagtgggt 1122 Score = 123 bits (62), Expect = 6e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 470 caggatgcgatgaagactggttccttctacggtt 503 || || ||||||||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 851 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 910 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 911 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 970 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 971 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1030 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 1031 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1090 Query: 248 tacgacgatgaggtgcgcaagtgggt 273 |||||||| ||||||||||||||||| Sbjct: 1091 tacgacgacgaggtgcgcaagtgggt 1116 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 470 caggatgcgatgaagactggttccttctacgg 501 || || ||||||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 228 bits (115), Expect = 1e-56 Identities = 343/419 (81%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||||||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| Sbjct: 824 gaggagaacccacgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcg 883 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 884 cccctcatccgggacggccgcatggagaagttctactgggcgcccacccgggaggaccgc 943 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| || |||||||| ||||||| |||||||| ||| |||||| | || || | | Sbjct: 944 atcggcgtgtgcaagggcatcttccgcaccgacaacgtccccgacgaggccgtggtgagg 1003 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 | || ||||||||||| || || ||||| ||||| ||||| || ||||| || |||||| Sbjct: 1004 ctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggcgcgggtg 1063 Query: 248 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 307 |||||||| ||||||||||||||||||||| | ||| |||||||||| |||| || Sbjct: 1064 tacgacgacgaggtgcgcaagtgggtcggcgagatcggcgtcgagaacatctccaagcgg 1123 Query: 308 ctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaag 367 || || ||||| |||| ||||| ||| ||||| ||||| |||||||| |||||||| Sbjct: 1124 ctcgtcaactccagggaggggccgccgacgttcgaccagcccaagatgaccatcgagaag 1183 Query: 368 ctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagct 426 || | |||||||| |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 1184 ctcatggagtacggccacatgctggtccaggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 218 bits (110), Expect = 1e-53 Identities = 230/270 (85%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 |||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||| Sbjct: 974 gaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgct 1033 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 1034 cccctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcgaggaccgc 1093 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| || |||||||| ||||||| |||||||| ||| |||||| | || || | | Sbjct: 1094 atcggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgtggtgagg 1153 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 | || ||||||||||| || || ||||| ||||| ||||| || ||||| || |||||| Sbjct: 1154 ctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggcacgggtg 1213 Query: 248 tacgacgatgaggtgcgcaagtgggtcggc 277 |||||||| ||||||||||||||||||||| Sbjct: 1214 tacgacgacgaggtgcgcaagtgggtcggc 1243 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 398 gagcaggacaatgtcaagcgtgtgcagct 426 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 200 bits (101), Expect = 3e-48 Identities = 182/209 (87%) Strand = Plus / Minus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 108896 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 108837 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 108836 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 108777 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 108776 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 108717 Query: 188 atcgtcgacaccttcccaggacaatccat 216 |||||||||| ||||||||| |||||||| Sbjct: 108716 atcgtcgacagcttcccaggccaatccat 108688 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 470 caggatgcgatgaagactggttccttctacggttaga 506 || || |||||||||||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 89 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 148 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 149 ttcc 152 |||| Sbjct: 112459 ttcc 112456 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 273 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactc 318 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 200 bits (101), Expect = 3e-48 Identities = 182/209 (87%) Strand = Plus / Minus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 30773 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 30714 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 30713 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 30654 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 30653 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 30594 Query: 188 atcgtcgacaccttcccaggacaatccat 216 |||||||||| ||||||||| |||||||| Sbjct: 30593 atcgtcgacagcttcccaggccaatccat 30565 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 470 caggatgcgatgaagactggttccttctacggttaga 506 || || |||||||||||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 89 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 148 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 149 ttcc 152 |||| Sbjct: 34336 ttcc 34333 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 273 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactc 318 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 200 bits (101), Expect = 3e-48 Identities = 182/209 (87%) Strand = Plus / Minus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 28304035 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 28303976 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 28303975 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 28303916 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 28303915 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 28303856 Query: 188 atcgtcgacaccttcccaggacaatccat 216 |||||||||| ||||||||| |||||||| Sbjct: 28303855 atcgtcgacagcttcccaggccaatccat 28303827 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 470 caggatgcgatgaagactggttccttctacggttaga 506 || || |||||||||||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 89 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 148 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 149 ttcc 152 |||| Sbjct: 28307598 ttcc 28307595 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 273 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactc 318 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 200 bits (101), Expect = 3e-48 Identities = 182/209 (87%) Strand = Plus / Minus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| Sbjct: 28286484 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 28286425 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 28286424 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 28286365 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| Sbjct: 28286364 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 28286305 Query: 188 atcgtcgacaccttcccaggacaatccat 216 |||||||||| ||||||||| |||||||| Sbjct: 28286304 atcgtcgacagcttcccaggccaatccat 28286276 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 349 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 350 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 409 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 410 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 469 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 470 caggatgcgatgaagactggttccttctacggttaga 506 || || |||||||||||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 89 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 148 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 149 ttcc 152 |||| Sbjct: 28290047 ttcc 28290044 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 273 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 gagaacattggcaagaggctggtgaactc 318 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 180 bits (91), Expect = 3e-42 Identities = 220/263 (83%) Strand = Plus / Plus Query: 9 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 68 ||||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| | Sbjct: 511 aggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccc 570 Query: 69 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 128 | || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 571 ccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccggg 630 Query: 129 tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 188 |||| ||||||| ||||||||| | ||||||| ||| | ||| |||| ||||| Sbjct: 631 tcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagc 690 Query: 189 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 248 |||||||||||||||| || |||||||||||||| |||||||| ||| | || |||| | Sbjct: 691 tcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtct 750 Query: 249 acgacgatgaggtgcgcaagtgg 271 ||||||| |||||| | |||||| Sbjct: 751 acgacgacgaggtgaggaagtgg 773 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 299 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 358 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 359 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 418 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 419 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 478 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 479 atgaagactggttccttctacggttag 505 || |||||||| |||||||| |||||| Sbjct: 981 atcaagactggatccttctatggttag 1007
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 180 bits (91), Expect = 3e-42 Identities = 220/263 (83%) Strand = Plus / Plus Query: 9 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 68 ||||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| | Sbjct: 705 aggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccc 764 Query: 69 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 128 | || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 765 ccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccggg 824 Query: 129 tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 188 |||| ||||||| ||||||||| | ||||||| ||| | ||| |||| ||||| Sbjct: 825 tcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagc 884 Query: 189 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 248 |||||||||||||||| || |||||||||||||| |||||||| ||| | || |||| | Sbjct: 885 tcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtct 944 Query: 249 acgacgatgaggtgcgcaagtgg 271 ||||||| |||||| | |||||| Sbjct: 945 acgacgacgaggtgaggaagtgg 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 299 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 358 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 359 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 418 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 419 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 478 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 479 atgaagactggttccttcta 498 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 176 bits (89), Expect = 5e-41 Identities = 218/261 (83%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || Sbjct: 814 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 873 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| || Sbjct: 874 ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 933 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 190 || ||||||| ||||||||| | ||||||| ||| | ||| |||| ||||| || Sbjct: 934 ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 993 Query: 191 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 250 |||||||||||||| || |||||||||||||| |||||||| ||| | || |||| ||| Sbjct: 994 gtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtctac 1053 Query: 251 gacgatgaggtgcgcaagtgg 271 ||||| |||||| | |||||| Sbjct: 1054 gacgacgaggtgaggaagtgg 1074 Score = 103 bits (52), Expect = 6e-19 Identities = 166/204 (81%) Strand = Plus / Plus Query: 302 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 361 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 362 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 421 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 422 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 481 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 482 aagactggttccttctacggttag 505 |||||||| |||||||| |||||| Sbjct: 1285 aagactggatccttctatggttag 1308
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 176 bits (89), Expect = 5e-41 Identities = 218/261 (83%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || Sbjct: 677 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 736 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| || Sbjct: 737 ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 796 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 190 || ||||||| ||||||||| | ||||||| ||| | ||| |||| ||||| || Sbjct: 797 ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 856 Query: 191 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 250 |||||||||||||| || |||||||||||||| |||||||| ||| | || |||| ||| Sbjct: 857 gtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtctac 916 Query: 251 gacgatgaggtgcgcaagtgg 271 ||||| |||||| | |||||| Sbjct: 917 gacgacgaggtgaggaagtgg 937 Score = 97.6 bits (49), Expect = 4e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 302 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 361 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 362 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 421 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 422 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 481 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 482 aagactggttccttcta 498 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 161 bits (81), Expect = 3e-36 Identities = 186/221 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||| ||||||| ||||| ||||||| |||||||| ||||| || | |||||||| Sbjct: 944 gagaacgcccgtgttcccattatcgtcactggtaacgacttctccaccttgtacgctccc 1003 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1004 cttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtatc 1063 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 190 ||||| || ||||||||| |||||||||||| ||| || || |||||| || Sbjct: 1064 ggtgttgccaccggtatcttcaggaccgacaatgttcctgaggaccacgttgtcaagctc 1123 Query: 191 gtcgacaccttcccaggacaatccattgactttttcggtgc 231 |||||||||||||| || ||||| ||||| || |||||||| Sbjct: 1124 gtcgacaccttccctggccaatctattgatttcttcggtgc 1164
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 850 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 909 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 910 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 14264 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 14205 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14204 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 927 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 986 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 987 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3019 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 3078 Query: 101 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 151 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3079 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 155 bits (78), Expect = 2e-34 Identities = 210/254 (82%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 430 gaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcg 489 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 490 ccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgc 549 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| ||||||||||| ||||||| |||||| ||| || ||| |||||| || Sbjct: 550 atcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccag 609 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 | |||||||||||||| || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 610 ctggtcgacaccttccctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtc 669 Query: 248 tacgacgatgaggt 261 |||||||| ||||| Sbjct: 670 tacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 458 ggtgatgctaaccaggatgcgatgaagactggttccttct 497 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 147 bits (74), Expect = 4e-32 Identities = 209/254 (82%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 825 gaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcg 884 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 885 ccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgc 944 Query: 128 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 187 ||||| ||||||||||| ||||||| |||||| ||| || ||| |||||| || Sbjct: 945 atcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccag 1004 Query: 188 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 247 | |||||||||||||| || || ||||| || || ||||| || |||||||| ||||| Sbjct: 1005 ctggtcgacaccttccctggccagtccatcgatttcttcggcgcgctgcgtgcccgggtc 1064 Query: 248 tacgacgatgaggt 261 |||||||| ||||| Sbjct: 1065 tacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 458 ggtgatgctaaccaggatgcgatgaagactggttccttct 497 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 ||||||||||||||||| || ||| | |||||||||||||||||||| || | |||||| Sbjct: 902 gaggagaacccccgtgtcccaatcattgtcaccggtaacgatttctcaacattgtacgct 961 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 127 ||||| |||||||| ||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 962 cctctcatccgtgacggtcgtatggagaagttctactgggctcccacccgcgaagatcgt 1021 Query: 128 atcggtgtctgca 140 || || ||||||| Sbjct: 1022 attggagtctgca 1034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 458 ggtgatgctaac 469 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Plus Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 253 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 254 gatgaggtgcgcaagtgg 271 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||| |||||||| ||| | ||||| |||||||| |||||||| | ||||||||| Sbjct: 889 gagaaccctcgtgtgcctatcattgtcactggtaacgacttctcgacattgtacgctcct 948 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||||||||||||||| || |||||||||||||| ||| | || |||||||| Sbjct: 949 cttatccgtgatggtcgtatggaaaaattctactgggctcctaccagggaagaccgtatt 1008 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgt 165 ||||||||||||||||| ||| ||| |||||||| Sbjct: 1009 ggtgtctgcaagggtattttcaggactgacaatgt 1043 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 428 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 477 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Plus Query: 18 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 77 ||||||| |||||| | || || |||||||||||||| || | |||||||| || |||| Sbjct: 2693 cccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccccttatcc 2752 Query: 78 gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2753 gtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtattggtgtct 2812 Query: 138 g 138 | Sbjct: 2813 g 2813
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Plus Query: 18 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 77 ||||||| |||||| | || || |||||||||||||| || | |||||||| || |||| Sbjct: 1065 cccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccccttatcc 1124 Query: 78 gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1125 gtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtattggtgtct 1184 Query: 138 g 138 | Sbjct: 1185 g 1185 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 189 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 248 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 249 acgacgatga 258 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 131 bits (66), Expect = 3e-27 Identities = 198/242 (81%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 377 aacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctc 436 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 || || || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 437 attcgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 496 Query: 134 gtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtc 193 || |||||||| ||||||| |||||| ||| |||||| |||||| || ||||| Sbjct: 497 gtgtgcaagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtc 556 Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 253 ||| ||||||| || || ||||| ||||| ||||| || || || || |||||||||||| Sbjct: 557 gacgccttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgac 616 Query: 254 ga 255 || Sbjct: 617 ga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 131 bits (66), Expect = 3e-27 Identities = 198/242 (81%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 385 aacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctc 444 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 445 atccgcgacgggcgcatggacaagttctactgggcgcccacccgggaggaccgcatcggc 504 Query: 134 gtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtc 193 || |||||||| ||||||| |||||| ||| |||||| |||||| || ||||| Sbjct: 505 gtgtgcaagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtc 564 Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 253 ||| ||||||| || || ||||| ||||| ||||| || || || || |||||||||||| Sbjct: 565 gacgccttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgac 624 Query: 254 ga 255 || Sbjct: 625 ga 626
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||||||||| |||||| ||||||| |||||||||||||| || || || |||||| Sbjct: 704 gagaacccccgtgtccccatcatcgtcactggtaacgatttctccacactgtatgctcct 763 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||| |||||||||||||| || |||||||| || || | |||||||||||| Sbjct: 764 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtatc 823 Query: 131 ggtgtctgcaagggtatcttccagaccgac 160 ||||| ||||| ||||| ||| ||||||| Sbjct: 824 ggtgtttgcaaaggtattttcaggaccgac 853 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Plus Query: 189 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 248 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 249 acga 252 |||| Sbjct: 942 acga 945
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 391 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 450 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 451 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 510 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 511 gtgtgcaagggcatcttcc 529
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 397 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 456 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 457 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 516 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 517 gtgtgcaagggcatcttcc 535
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 395 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 454 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 |||||||| || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 455 atccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 514 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 515 gtgtgcaagggcatcttcc 533
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||||||||||||| || | ||||||||||| |||||||| || | || ||||| Sbjct: 14 gagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccaccttgtatgctccc 73 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || ||||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 74 cttatccgtgatggtcgtatggagaaattctactgggcaccaacccgcgacgatcgtatt 133 Query: 131 ggtgtctgca 140 |||||||||| Sbjct: 134 ggtgtctgca 143
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 23 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 82 ||||||||| |||||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct: 840 gtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgac 899 Query: 83 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 142 || || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 900 ggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaag 959 Query: 143 ggtatcttcc 152 || ||||||| Sbjct: 960 ggcatcttcc 969 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 338 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 397 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 398 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 457 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 458 ggtgatgctaaccaggatgcgatgaagactggttccttct 497 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 123 bits (62), Expect = 6e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 18 cccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatcc 77 |||||||||||||| | ||||| |||||||||||||| || || || |||||||| |||| Sbjct: 901 cccgtgtgcccatcattgtcactggtaacgatttctcaacactttatgctcctctcatcc 960 Query: 78 gtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtct 137 ||||||||||||||||||||||||||||||| || || | || ||||| || ||||| | Sbjct: 961 gtgatggtcgtatggagaagttctactgggcaccaacaagggaagaccgcattggtgttt 1020 Query: 138 gcaagggtatcttccagaccga 159 ||||||| || |||| |||||| Sbjct: 1021 gcaagggaattttccggaccga 1042
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 20 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 79 |||||||||||| | ||||||||||| |||||||| || || || |||||||| |||||| Sbjct: 336 cgtgtgcccatcattgtcaccggtaatgatttctcaacactttatgctcctctcatccgt 395 Query: 80 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 139 |||||||||||||||||||||||||||||||| || | || || ||||| ||||||||| Sbjct: 396 gatggtcgtatggagaagttctactgggctcctactagagaagatcgtattggtgtctgc 455 Query: 140 a 140 | Sbjct: 456 a 456 Score = 48.1 bits (24), Expect = 0.030 Identities = 75/92 (81%) Strand = Plus / Plus Query: 182 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 241 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 242 cgggtgtacgacgatgaggtgcgcaagtgggt 273 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 395 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 454 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 455 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 514 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 515 gtgtgcaagggcatcttcc 533
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 391 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 450 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 451 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 510 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 511 gtgtgcaagggcatcttcc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 391 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 450 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 451 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 510 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 511 gtgtgcaagggcatcttcc 529
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 393 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 452 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 453 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 512 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 513 gtgtgcaagggcatcttcc 531
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 14 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 73 ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 397 aacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctc 456 Query: 74 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 133 ||||| || || || ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 457 atccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggc 516 Query: 134 gtctgcaagggtatcttcc 152 || |||||||| ||||||| Sbjct: 517 gtgtgcaagggcatcttcc 535
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||| ||||| || ||| | |||||||||||||||||||||||||| ||||| || Sbjct: 889 gagaaccctcgtgttccgatcattgtcaccggtaacgatttctcgacgctgtacgcgccg 948 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||| ||||||||||||||||| |||||||| |||||| | || || | ||| Sbjct: 949 ctcatccgtgacggtcgtatggagaagttttactgggcacccaccagggaagataggatc 1008 Query: 131 ggtgtctgcaagggtatcttccagaccgacaatgt 165 ||||| |||| ||||| ||| |||||||||||| Sbjct: 1009 ggtgtttgcacaggtattttcaggaccgacaatgt 1043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctg 235 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 117 bits (59), Expect = 4e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 20 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 79 ||||| |||||| |||| || |||||||| ||||| || | || |||||||| |||||| Sbjct: 102 cgtgtacccatcatcgttactggtaacgacttctctaccttgtatgctcctctcatccgt 161 Query: 80 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 139 ||||||||||||||||| ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct: 162 gatggtcgtatggagaaattctactgggcacccactcgtgaggaccgtattggtgtttgc 221 Query: 140 aagggtatcttccagaccgacaatgtc 166 | ||||||||| ||| ||||||||| Sbjct: 222 actggtatcttcaggactgacaatgtc 248
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 115 bits (58), Expect = 2e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||||||||| ||||| ||||||| |||||||||||||| || || || |||||| Sbjct: 703 gagaacccccgtgtccccattatcgtcactggtaacgatttctccacactgtatgctcct 762 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || |||||||| |||||||||||||| || |||||||| || || | ||||||||| || Sbjct: 763 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtgtc 822 Query: 131 ggtgtctgcaagggtatcttccagaccgac 160 ||||| ||||| ||||| ||| ||||||| Sbjct: 823 ggtgtttgcaaaggtattttcaggaccgac 852 Score = 48.1 bits (24), Expect = 0.030 Identities = 54/64 (84%) Strand = Plus / Plus Query: 189 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 248 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 249 acga 252 |||| Sbjct: 941 acga 944
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||| |||||||||||||| | ||||||||||| |||||||| ||||| || |||||| Sbjct: 898 gagaacgcccgtgtgcccatcattgtcaccggtaatgatttctcaacgctgtatgctcct 957 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggc 108 || || |||||||| ||||||||||||||||||||||| Sbjct: 958 ctcattcgtgatgggcgtatggagaagttctactgggc 995
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 8 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 67 |||||||||||||||||||||||| ||||||| || ||||||||||| | || || ||| Sbjct: 316 gaggagaacccccgtgtgcccatcatcgtcacaggaaacgatttctcagcactatatgct 375 Query: 68 cctctgatccgtgatggtcgtatggagaagttctactgggctcc 111 || || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 376 ccccttatccgcgatggtcgtatggaaaagttctactgggctcc 419
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 ||||| || ||||| || ||| ||||||| ||||| || |||||||| | ||||||||| Sbjct: 732 gagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcct 791 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || Sbjct: 792 ctcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaatt 851 Query: 131 ggtgtctgcaagggtatcttc 151 |||||||||| ||||||||| Sbjct: 852 ggtgtctgcactggtatcttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 ||||| || ||||| || ||| ||||||| ||||| || |||||||| | ||||||||| Sbjct: 905 gagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcct 964 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || Sbjct: 965 ctcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaatt 1024 Query: 131 ggtgtctgcaagggtatcttc 151 |||||||||| ||||||||| Sbjct: 1025 ggtgtctgcactggtatcttc 1045
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 103 bits (52), Expect = 6e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294 Query: 95 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 154 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354 Query: 155 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 214 |||||||| || ||| || |||| || ||||| ||||| |||||||| |||||||| Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414 Query: 215 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 262 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 415 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 11 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 70 |||||||| ||||| |||||| | ||||| |||||||| ||||| || | || || ||| Sbjct: 889 gagaaccctcgtgttcccatcattgtcactggtaacgacttctcaacattgtatgcccct 948 Query: 71 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 130 || ||||||||||| ||||||||||| ||||||||||| |||||| | || |||||||| Sbjct: 949 cttatccgtgatggccgtatggagaaattctactgggcacccaccagggaggaccgtatt 1008 Query: 131 ggtgtctgcaa 141 ||||||||||| Sbjct: 1009 ggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 7.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 385 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 444 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 445 ccaggcagctctgggtgatgctaa 468 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 17 ccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatc 76 |||||||| ||||| ||| ||| |||||||||||||| || || ||||| || || ||| Sbjct: 1724 ccccgtgttcccattgtctgcacgggtaacgatttctccaccctgtacgcccccctcatc 1783 Query: 77 cgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtc 136 ||||| || || |||||||||| ||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1784 cgtgacggccgcatggagaagtactactggaaccccacccgtgaggaccgcatcggcgtc 1843 Query: 137 tgcaagggtatcttccag 154 |||| ||| ||||||||| Sbjct: 1844 tgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 gagcaggacaatgtcaagcgtgtgcagct 426 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 33 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 92 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 147 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 206 Query: 93 agaagttctactgggc 108 |||||||||||||||| Sbjct: 207 agaagttctactgggc 222 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 182 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 231 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 87.7 bits (44), Expect = 3e-14 Identities = 182/228 (79%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 879 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 938 Query: 95 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 154 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 939 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 998 Query: 155 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 214 |||||||| || ||| || | || | ||||| ||||| |||||||| |||||||| Sbjct: 999 accgacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatct 1058 Query: 215 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 262 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 1059 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 33 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 92 ||||||| |||||||||||||| || | || ||||| || ||||||||||||||||||| Sbjct: 907 tcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgg 966 Query: 93 agaagttctactgggc 108 |||||||||||||||| Sbjct: 967 agaagttctactgggc 982
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949 Query: 95 aagttctactgggc 108 |||||||||||||| Sbjct: 950 aagttctactgggc 963
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 365 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 424 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 425 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 480 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| |||||||||||||| || | || || ||||| ||||||||||||||||||||| Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985 Query: 95 aagttctactgggc 108 || ||||||||||| Sbjct: 986 aaattctactgggc 999 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 182 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 235 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 67.9 bits (34), Expect = 3e-08 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||||||||| || | |||| |||||| |||| |||||| ||||||||||||||| Sbjct: 919 ggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagttc 978 Query: 101 t--actgggctcccacccgtgacgaccgtatcggtgtctg 138 | ||||| || |||||||| ||||||||||||||||| Sbjct: 979 ttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 253 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 254 ga 255 || Sbjct: 2722 ga 2723
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 194 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 253 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 254 ga 255 || Sbjct: 1032 ga 1033
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 41 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 100 |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| || ||| Sbjct: 930 ggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattc 989 Query: 101 tactgggctcccacccgtgacgaccgtat 129 ||||||||||| || ||||| || ||||| Sbjct: 990 tactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 191 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 250 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 251 gacgatgaggtgcgcaagtggg 272 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 933 aagttctactgg 944
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 35 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 94 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 95 aagttctactgg 106 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 72 tgatccgtgatggtcgtatggagaagttctactgg 106 |||| |||||||| ||||||||||||||||||||| Sbjct: 644 tgattcgtgatgggcgtatggagaagttctactgg 678
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 44 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 103 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 104 tgg 106 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 65 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 108 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 65 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 108 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 77 cgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 123 |||||||| |||||||| || ||||||||||| || || |||||||| Sbjct: 6938 cgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 agccaggcagctctgggtgatg 464 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 caagatcgtcgacaccttccc 204 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 1.9 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 35 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 93 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 94 gaagttctactgg 106 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 acccaccatctcttgctgcat 542 ||||||||||||||||||||| Sbjct: 63550 acccaccatctcttgctgcat 63530
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 ggtgtctgcaagggtatcttccag 154 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 agcgtgtgcagcttgctgac 433 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 agtgacgagtctgtcgtcaa 186 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 caggagcaggacaatgtcaa 414 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cgtgacgaccgtatcggtgt 135 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 caggagcaggacaatgtcaa 414 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tgagccaggcagctctgggtgatg 464 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,084,129 Number of Sequences: 3902068 Number of extensions: 3084129 Number of successful extensions: 53597 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53293 Number of HSP's gapped (non-prelim): 265 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
