>FAHD1_PONPY (Q5RDW0) Fumarylacetoacetate hydrolase domain-containing protein 1|
           (EC 3.-.-.-)
          Length = 224

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           ISY+S I+TL EGD+ILTG P+GVGPV+    I+AGI GL+   F V
Sbjct: 173 ISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMRFKV 219

>FAHD1_HUMAN (Q6P587) Fumarylacetoacetate hydrolase domain-containing protein 1|
           (EC 3.-.-.-) (YISK-like)
          Length = 224

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           ISY+S I+TL EGD+ILTG P+GVGPV+    I+AGI GL+   F V
Sbjct: 173 ISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKV 219

>FAHD1_MOUSE (Q8R0F8) Fumarylacetoacetate hydrolase domain-containing protein 1|
           (EC 3.-.-.-)
          Length = 227

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           ISY+S I+TL EGD+ILTG P+GVGPV+    I+AGI G++   F V
Sbjct: 176 ISYVSKIITLEEGDLILTGTPKGVGPVKENDEIEAGIDGVVSMRFKV 222

>Y643_PYRHO (O58377) Hypothetical protein PH0643|
          Length = 230

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           I YIS IMTL  GD+I TG P GVGP+R G  I+A I G+ + EFDV
Sbjct: 176 IEYISHIMTLEPGDIIATGTPPGVGPLRHGDRIEAWIEGIGKMEFDV 222

>FAHD1_RAT (Q6AYQ8) Fumarylacetoacetate hydrolase domain-containing protein 1|
           (EC 3.-.-.-)
          Length = 221

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           ISY+S I+TL EGD+ILTG P+GVG V+    I+AGI G++   F V
Sbjct: 170 ISYVSKIITLEEGDLILTGTPKGVGAVKENDEIEAGIDGVVSMRFKV 216

>Y1397_PYRAB (Q9UYW0) Hypothetical protein PYRAB13970|
          Length = 225

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           I YISSIMTL  GD+I TG P GVGP+R G  I+A + G+   E +V
Sbjct: 171 IEYISSIMTLEPGDIIATGTPPGVGPLRHGDKIEAWVEGIGVLEEEV 217

>Y1656_METJA (Q59050) Hypothetical protein MJ1656|
          Length = 237

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGL 196
           + +++SIMTL  GD+I TG P GVG ++ G  ++  I G+
Sbjct: 187 VEFVASIMTLYPGDIISTGTPPGVGELKAGDVVECEIEGI 226

>YCGM_ECOLI (P76004) Protein ycgM|
          Length = 219

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITG 193
           I+Y+S   TL  GDV+LTG P+GVGP++ G  +     G
Sbjct: 173 IAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDG 211

>Y2225_ARCFU (O28058) Hypothetical protein AF2225|
          Length = 250

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGI 187
           +S++SS+MTL  GDVI TG P GVG ++ G  ++  I
Sbjct: 193 VSFVSSVMTLKAGDVIATGTPAGVGMLKDGDVVEVEI 229

>YO23_CAEEL (P34673) Hypothetical protein ZK688.3 in chromosome III|
          Length = 214

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAEFDV 217
           + Y +   TL  GDV+LTG P GV  +  G  I+ G+T  + ++F+V
Sbjct: 167 LEYTTQFFTLEVGDVVLTGTPAGVTKINSGDVIEFGLTDKLNSKFNV 213

>YOS9_SCHPO (Q9P7L4) Protein C21C3.09c in chromosome II|
          Length = 221

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 80  SYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGLIEAE 208
           S I+  M+L  GD++LTG P+GVGPV  G  + A +    E E
Sbjct: 165 SSITEAMSLNPGDLVLTGTPKGVGPVVPGDILSARLLTAQEQE 207

>HPAG_SALDU (Q9RPU5) 4-hydroxyphenylacetate degradation bifunctional|
           isomerase/decarboxylase [Includes:
           2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC
           5.3.3.10) (HHDD isomerase)
           (5-carboxymethyl-2-hydroxymuconate delta-isomerase);
           5-carboxymethyl-2-oxo
          Length = 429

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGL 196
           ISY+S  MTL  GD+I TG P+G+  V  G  +   I G+
Sbjct: 376 ISYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVVLEIKGV 415

>HPAG_ECOLI (Q46978) 4-hydroxyphenylacetate degradation bifunctional|
           isomerase/decarboxylase [Includes:
           2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC
           5.3.3.10) (HHDD isomerase)
           (5-carboxymethyl-2-hydroxymuconate delta-isomerase);
           5-carboxymethyl-2-oxo
          Length = 429

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXIKAGITGL 196
           I+Y+S  MTL  GD+I TG P+G+  V  G  +   + G+
Sbjct: 376 IAYLSEFMTLNPGDMIATGTPKGLSDVVPGDEVVVEVEGV 415

>YNQ8_YEAST (P53889) Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic|
           region
          Length = 259

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPVRIGXXI 175
           + +IS++++L  GD+ILTG P GVG ++ G  +
Sbjct: 197 LQHISTMISLEPGDIILTGTPAGVGELKPGDRV 229

>HPCE_ECOLI (P37352) Homoprotocatechuate catabolism bifunctional|
           isomerase/decarboxylase [Includes:
           2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC
           5.3.3.10) (HHDD isomerase)
           (5-carboxymethyl-2-hydroxymuconate delta-isomerase);
           5-carboxymethyl-2-oxo-hex
          Length = 427

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +2

Query: 77  ISYISSIMTLMEGDVILTGXPEGVGPV 157
           I+Y+S  MTL  GD+I TG P+G+  V
Sbjct: 376 IAYLSEFMTLNPGDMIATGTPKGLSDV 402

>GIDB_XANAC (Q8PF23) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited|
           division protein B)
          Length = 212

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 210 NSASMRPVIPALXXCPIRTGPTPSGXPVNITSPSINVMI 94
           +S +M+P I +     + TGP   G P+ IT P + V +
Sbjct: 63  DSLAMQPYIASGALADLGTGPGLPGIPLAITRPQLQVTL 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,477,092
Number of Sequences: 219361
Number of extensions: 235971
Number of successful extensions: 574
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)