ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4g06 |
|---|---|
| Clone Library Name | barley_pub |
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 64.7 bits (156), Expect = 5e-11 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = +2 Query: 2 YVTGEGPFENLCAHLSDPFGNNLLTVISGAAERVPS 109 YVTGEGP ENL HLSDPFGNNLLTVI+G AER P+ Sbjct: 244 YVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPT 279
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 37.4 bits (85), Expect = 0.009 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNNLLT 76 VTG GP++NL HL+DP NN+LT Sbjct: 245 VTGVGPYQNLLDHLADPVNNNVLT 268
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 37.4 bits (85), Expect = 0.009 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNNLL 73 VTG+GPFENL HLSDP+ N ++ Sbjct: 225 VTGKGPFENLLQHLSDPWHNTIV 247
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 36.2 bits (82), Expect = 0.019 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HLSDP NN Sbjct: 236 VTGKGPLENLADHLSDPVNNN 256
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 84 VTGKGPLENLADHLADPVNNN 104
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPLENLADHLADPVNNN 255
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPIENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 235 VTGKGPIENLADHLADPVNNN 255
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 174 VTGKGPLENLADHLADPVNNN 194
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 223 VTGKGPLENLADHLADPVNNN 243
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 246 VTGKGPIENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 246 VTGKGPIENLADHLADPVNNN 266
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 224 VTGKGPLENLADHLADPVNNN 244
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 237 VTGKGPLENLADHLADPVNNN 257
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 92 VTGKGPLENLADHLADPVNNN 112
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPLENLADHLADPVNNN 254
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPLENLADHLADPVNNN 254
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 229 VTGKGPLENLADHLADPVNNN 249
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPLENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPLENLADHLADPVNNN 254
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 242 VTGKGPIENLADHLADPVNNN 262
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 196 VTGKGPLENLADHLADPVNNN 216
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPLENLADHLADPVNNN 253
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 232 VTGKGPIENLADHLTDPVNNN 252
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 232 VTGKGPLENLADHLADPVNNN 252
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 232 VTGKGPLENLADHLADPVNNN 252
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 34.3 bits (77), Expect = 0.073 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 235 VTGKGPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 34.3 bits (77), Expect = 0.073 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 235 VTGKGPLENLADHIADPVNNN 255
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.073 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 233 VTGKGPLENLADHIADPVNNN 253
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 34.3 bits (77), Expect = 0.073 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 230 VTGKGPLENLADHIADPVNNN 250
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.073 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPIENLFDHLADPVANN 253
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 34.3 bits (77), Expect = 0.073 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 232 VTGKGPIENLADHIADPVANN 252
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 34.3 bits (77), Expect = 0.073 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 234 VTGKGPIENLYDHLADPVANN 254
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 34.3 bits (77), Expect = 0.073 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 118 VTGKGPIENLYDHLADPVANN 138
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 33.9 bits (76), Expect = 0.095 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL DP NN Sbjct: 235 VTGKGPLENLADHLVDPVNNN 255
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 33.9 bits (76), Expect = 0.095 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 236 VTGKGPLENLNDHLADPVANN 256
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 33.9 bits (76), Expect = 0.095 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 205 VTGKGPIENLSDHIADPVANN 225
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 33.9 bits (76), Expect = 0.095 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 233 VTGKGPIENLSDHINDPVANN 253
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 33.9 bits (76), Expect = 0.095 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL DP NN Sbjct: 236 VTGKGPLENLFDHLDDPVANN 256
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNNLLTVI 82 VTGEGP EN HL DP +N LT + Sbjct: 90 VTGEGPVENWLYHLQDPSAHNGLTAL 115
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 33.5 bits (75), Expect = 0.12 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +2 Query: 11 GEGPFENLCAHLSDPFGNNLLTVI 82 G GP ENL HL+DP+ NN+ VI Sbjct: 215 GTGPLENLATHLADPWHNNIGDVI 238
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 33.5 bits (75), Expect = 0.12 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP +NL HL+DP NN Sbjct: 235 VTGKGPLDNLVDHLADPVNNN 255
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 33.5 bits (75), Expect = 0.12 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL++P NN Sbjct: 213 VTGKGPLENLADHLAEPVNNN 233
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 33.1 bits (74), Expect = 0.16 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 231 VTGKGPIENLFDHVADPVANN 251
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.16 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 233 VTGKGPIENLYDHVADPVANN 253
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.16 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL H++DP NN Sbjct: 233 VTGKGPIENLFDHVADPVANN 253
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+DP NN Sbjct: 233 VTGKGPIENLSDHLADPAVNN 253
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 32.7 bits (73), Expect = 0.21 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%) Frame = +2 Query: 8 TGEGPFENLCAHLSDPFGNNLLTVI-----SGAAE 97 TGE P NL AHL++P G N+ T + SGA E Sbjct: 335 TGESPLANLSAHLANPIGANITTNLAMFASSGAKE 369
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP +NL HL+DP NN Sbjct: 224 VTGKGPIQNLADHLADPGTNN 244
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL+ P NN Sbjct: 231 VTGKGPLENLADHLAGPVNNN 251
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL +P NN Sbjct: 233 VTGKGPLENLLDHLDNPVANN 253
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 32.3 bits (72), Expect = 0.28 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP E+L H++DP NN Sbjct: 234 VTGKGPLEDLADHIADPVNNN 254
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP +NL H++DP NN Sbjct: 233 VTGKGPIQNLYDHVADPVANN 253
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 8 TGEGPFENLCAHLSDPFGNNLLTVIS 85 TGE P NL AH ++P G N+ T ++ Sbjct: 306 TGESPLANLAAHFANPVGANITTTLA 331
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 31.6 bits (70), Expect = 0.47 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP ENL HL++P NN Sbjct: 242 VTGKGPIENLTDHLANPAENN 262
>DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC| 3.1.3.16) (Mitogen-activated protein kinase phosphatase 5) (MAP kinase phosphatase 5) (MKP-5) Length = 483 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 196 STSCCIARTHAAEHQQPTAADGQSTASSQAG 104 STSCC T+ +HQ T A TA++ G Sbjct: 77 STSCCTVATYDKDHQAQTQAIAAGTATTAIG 107
>DA_DROME (P11420) Protein daughterless| Length = 710 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/55 (23%), Positives = 25/55 (45%) Frame = -2 Query: 244 HTAHSYSHTFPR*NSHSTSCCIARTHAAEHQQPTAADGQSTASSQAGHPLGGAGD 80 HT H++SHT P ++ + H ++ P + + + A + GAG+ Sbjct: 224 HTPHAHSHTLPLPHALPHGHTLPHPHHSQQNSPAVQSSDAFSGAGASVKVAGAGN 278
>USE1_HUMAN (Q9NZ43) USE1-like protein (Hematopoietic stem/progenitor cells| protein MDS032) (Putative MAPK-activating protein PM26) (Protein p31) Length = 259 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 219 LFPGKIHTAHHAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSR 67 L PG++ T A + + SR R T R + LGT SA PEM V + Sbjct: 90 LAPGRVPTTARERVPATKTVHLQSRARYTSEMR-SELLGTDSAEPEMDVRK 139
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGN 64 VTG+GP +NL HL+DP N Sbjct: 221 VTGKGPVQNLTDHLADPTVN 240
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 8 TGEGPFENLCAHLSDPFGNNLLTVISGA 91 TG+GP N HLSDP ++ S + Sbjct: 263 TGKGPLNNWATHLSDPLHTTIIDTFSSS 290
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 8 TGEGPFENLCAHLSDPFGNNLLTVISGA 91 TG+GP N HLSDP ++ S + Sbjct: 260 TGKGPLNNWATHLSDPLHTTIIDTFSSS 287
>NMDE1_RAT (Q00959) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_PANTR (Q5IS45) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_MOUSE (P35436) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_HUMAN (Q12879) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) (hNR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 5 VTGEGPFENLCAHLSDPFGNN 67 VTG+GP +NL HL++P NN Sbjct: 221 VTGKGPVQNLDDHLANPTVNN 241
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 8 TGEGPFENLCAHLSDP 55 TG GP +NL AHL+DP Sbjct: 243 TGTGPIDNLFAHLADP 258
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 8 TGEGPFENLCAHLSDP 55 TG GP +NL AHL+DP Sbjct: 243 TGTGPIDNLFAHLADP 258
>NMDE2_RAT (Q00960) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 195 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>NMDE2_MOUSE (Q01097) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 195 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>NMDE2_HUMAN (Q13224) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) (N-methyl-D-aspartate receptor subunit 3) (NR3) (hNR3) Length = 1484 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -1 Query: 290 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 195 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>CIN_DROME (P39205) Molybdenum cofactor synthesis protein cinnamon| Length = 674 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 387 YSSSSGPKLPSEIRTMMKTFEKLLK*QW 304 +SS+SG K+P+ +++ K+FE+ QW Sbjct: 30 HSSTSGEKVPTPCQSLRKSFEQSCPGQW 57
>GLMS_PYRFU (Q8U4D1) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 597 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -1 Query: 302 PKLPSEIRTVMFLLPLIIYTYGTFVLSYFSP 210 PKLP EI +++++PL + Y VL +P Sbjct: 554 PKLPEEITPIVYIVPLQLLAYHLAVLRGNNP 584
>MURD_XYLFA (Q9PEB0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 468 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -3 Query: 189 HAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSRLLPKGSLRWAHR 31 H H Q IN + RP R+ L+AA S LP+ LRW +R Sbjct: 198 HLDWHGSEQRYINDKLSLVTVTRP--RIALLNAADPRLASLALPQSDLRWFNR 248
>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 280 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Frame = -2 Query: 235 HSYSHTFPR*N--------SHSTSCCIARTHAAEHQQPTAADGQSTASSQ 110 H HT R N SH T+CC + ++PTA D S S+ Sbjct: 21 HKIYHTLHRLNLTEDVGPESHGTACCSRAMPPRKKRRPTAGDDLSAKKSR 70
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 275 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>NMDE3_HUMAN (Q14957) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1233 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 275 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 275 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 189 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite repressor)| Length = 430 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%) Frame = -3 Query: 240 RHIRT-------LILFPG---KIHTAHHAASHARMQLSINSRRRRTGNQRPAHRL 106 RHIRT FPG K + H+R+ + NSRR G Q+ H L Sbjct: 95 RHIRTHTGEKPHACQFPGCSKKFSRSDELTRHSRIHSNPNSRRGNKGQQQQQHPL 149
>DLG7_HUMAN (Q15398) Discs large homolog 7 (Hepatoma up-regulated protein)| (HURP) Length = 846 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = -3 Query: 306 WSETPIRNQNGHVSSALDNLHIRHIRTLILFPGKIHTAHHAASHAR 169 W E + N+N + L+ L I+ + +L G+I HH + R Sbjct: 389 WHEEHVLNKNEATTKNLNGLPIKEVPSLERNEGRIAQPHHGVPYFR 434 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,890,705 Number of Sequences: 219361 Number of extensions: 1017422 Number of successful extensions: 2706 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 2612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2706 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
