ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X66428.1|HVPSANMR H.vulgare mRNA PsaN for photosystem I subu... 827 0.0
2dbj|AK059037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-101
3gb|AF052429.1|AF052429 Zea mays photosystem I complex PsaN subun... 343 3e-91
4gb|AY103702.1| Zea mays PCO139408 mRNA sequence 343 3e-91
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 198 1e-47
7emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa... 198 1e-47
8gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome... 123 5e-25
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
10gb|DQ175832.1| Hordeum vulgare clone DsB30 Ds insertion site fla... 98 3e-17
11gb|AY233207.1| Vitis vinifera putative photosystem I reaction ce... 80 7e-12
12dbj|AK058774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
13gb|DQ124073.1| Coffea arabica clone MN-SSH2-D11 mRNA sequence 54 4e-04
14ref|NM_125800.3| Arabidopsis thaliana PSI-N; calmodulin binding ... 50 0.006
15gb|AY081594.1| Arabidopsis thaliana photosystem I reaction cente... 50 0.006
16gb|AY062835.1| Arabidopsis thaliana photosystem I reaction centr... 50 0.006
17emb|BX829690.1|CNS0A1EX Arabidopsis thaliana Full-length cDNA Co... 50 0.006
18emb|BX834109.1|CNS0A0GR Arabidopsis thaliana Full-length cDNA Co... 50 0.006
19emb|BX830459.1|CNS09YUQ Arabidopsis thaliana Full-length cDNA Co... 50 0.006
20gb|U32176.1|ATU32176 Arabidopsis thaliana photosystem I PSI-N mR... 50 0.006
21ref|NM_001037056.1| Arabidopsis thaliana PSI-N; calmodulin bindi... 48 0.024
22emb|BX833455.1|CNS0A0LJ Arabidopsis thaliana Full-length cDNA Co... 48 0.024
23emb|BX841638.1|CNS09YLQ Arabidopsis thaliana Full-length cDNA Co... 48 0.024
24dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.024
25dbj|AK078482.1| Mus musculus 12 days embryo female mullerian duc... 44 0.37
26gb|AC008136.4|AC008136 Drosophila melanogaster, chromosome 3R, r... 44 0.37
27gb|AC005721.3|AC005721 Drosophila melanogaster, chromosome 3R, r... 44 0.37
28gb|AF492824.1| Phaseolus vulgaris photosystem I-N subunit (PSI-N... 44 0.37
29ref|NM_177656.2| Mus musculus RIKEN cDNA 6820408C15 gene (682040... 44 0.37
30gb|AE003706.5| Drosophila melanogaster chromosome 3R, section 44... 44 0.37
31emb|AL844517.6| Mouse DNA sequence from clone RP23-453K8 on chro... 44 0.37
32ref|XM_482762.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
33emb|AJ719967.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.5
34ref|NM_001006308.1| Gallus gallus WD repeat domain 57 (U5 snRNP ... 42 1.5
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
36dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
37dbj|AK108546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
38dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.5
39gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 5.8
40gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete... 40 5.8
41gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.8
42gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.8
43gb|AC110521.14| Mus musculus chromosome 12, clone RP23-50H15, co... 40 5.8
44gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome... 40 5.8
45ref|XM_853225.1| PREDICTED: Canis familiaris similar to neurobea... 40 5.8
46ref|XM_534497.2| PREDICTED: Canis familiaris similar to neurobea... 40 5.8
47ref|XM_844120.1| PREDICTED: Canis familiaris similar to neurobea... 40 5.8
48ref|XM_542808.2| PREDICTED: Canis familiaris similar to forkhead... 40 5.8
49ref|XM_742731.1| Aspergillus fumigatus Af293 actin associated pr... 40 5.8
50gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosom... 40 5.8
51gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, comple... 40 5.8
52gb|AC161232.7| Mus musculus chromosome 3, clone RP24-369J22, com... 40 5.8
53gb|DQ278876.1| Gallus gallus Lin-41 mRNA, complete cds 40 5.8
54ref|XM_968159.1| PREDICTED: Tribolium castaneum similar to CG587... 40 5.8
55emb|BX050838.1|CNS09BE2 Single read from an extremity of a full-... 40 5.8
56emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.8
57gb|AC177796.2| Mus musculus chromosome 3, clone wi1-1134L22, com... 40 5.8
58emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.8
59emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 5.8
60emb|AJ719919.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.8
61ref|NM_001012835.1| Gallus gallus guanine nucleotide binding pro... 40 5.8
62gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequ... 40 5.8
63dbj|AK128712.1| Homo sapiens cDNA FLJ46879 fis, clone UTERU30150... 40 5.8
64ref|XM_396585.2| PREDICTED: Apis mellifera similar to CG4928-PB,... 40 5.8
65dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
66gb|AY012161.1| Salmonella enterica subsp. V isolate M1656 phosph... 40 5.8
67gb|AY012160.1| Salmonella enterica subsp. V isolate M1633 phosph... 40 5.8
68gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative ary... 40 5.8
69gb|AF543530.1| Pinus taeda (+)-alpha-pinene synthase mRNA, compl... 40 5.8
70gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.8
71gb|AF158634.1|AF158634 Triticum ventricosum Vrga1 (Vrga1) gene, ... 40 5.8
72ref|XM_309714.2| Anopheles gambiae str. PEST ENSANGP00000012581 ... 40 5.8
73dbj|AK107737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
74emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.8
75gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, c... 40 5.8
76gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 40 5.8
77gb|DQ117917.1| Gallus gallus LIN-41 (LIN-41) mRNA, partial cds 40 5.8
78gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 40 5.8
79dbj|AB209034.1| Homo sapiens mRNA for Paxillin variant protein 40 5.8
80emb|AL928840.8| Mouse DNA sequence from clone RP24-233J2 on chro... 40 5.8
81emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chr... 40 5.8
82gb|AF478411.1| Chlamydomonas reinhardtii iron transporter Ftr1 (... 40 5.8
83emb|AL591712.18| Mouse DNA sequence from clone RP23-138C10 on ch... 40 5.8 
>emb|X66428.1|HVPSANMR H.vulgare mRNA PsaN for photosystem I subunit N
          Length = 665

 Score =  827 bits (417), Expect = 0.0
 Identities = 420/421 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgccgcctccgccggctccgccagggcaagcgtcttcgacgagtacctcgagaagagca 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccgccgcctccgccggctccgccagggcaagcgtcttcgacgagtacctcgagaagagca 261

                                                                       
Query: 62  agctcaacaaggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgc 121
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aactcaacaaggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgc 321

                                                                       
Query: 122 gcgcctacaccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccagg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcgcctacaccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccagg 381

                                                                       
Query: 182 acctcgccaagcagaagaaagtcccgttcatcaccgacgacctcgagatcgagtgcgagg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acctcgccaagcagaagaaagtcccgttcatcaccgacgacctcgagatcgagtgcgagg 441

                                                                       
Query: 242 ggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaagctggtcgatat 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaagctggtcgatat 501

                                                                       
Query: 302 ggcgagtgctgatgtatgtcagtcaggctgtacctagatgtccaaactgcacaagtgttt 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggcgagtgctgatgtatgtcagtcaggctgtacctagatgtccaaactgcacaagtgttt 561

                                                                       
Query: 362 cggctgtgaagtcatcgtctctgtaattttatcatcaagtggaatcctgtttttcacctg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cggctgtgaagtcatcgtctctgtaattttatcatcaagtggaatcctgtttttcacctg 621

            
Query: 422 t 422
           |
Sbjct: 622 t 622
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>dbj|AK059037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C11, full
           insert sequence
          Length = 657

 Score =  375 bits (189), Expect = e-101
 Identities = 240/257 (93%)
 Strand = Plus / Plus

                                                                       
Query: 32  gcgtcttcgacgagtacctcgagaagagcaagctcaacaaggagctgaacgacaagaaga 91
           |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 243 gcgtgttcgacgagtacctcgagaagagcaaggccaacaaggagctgaacgacaagaaga 302

                                                                       
Query: 92  gggcggcgacgagcggcgccaacttcgcgcgcgcctacaccgtccagttcggcagctgca 151
           ||  ||||||||||||||||||||||||| | || ||||||||| |||||||||||||| 
Sbjct: 303 ggctggcgacgagcggcgccaacttcgcgagggcgtacaccgtcgagttcggcagctgcc 362

                                                                       
Query: 152 agttcccctacaacttcaccggctgccaggacctcgccaagcagaagaaagtcccgttca 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 363 agttcccctacaacttcaccggctgccaggacctcgccaagcagaagaaagtcccattca 422

                                                                       
Query: 212 tcaccgacgacctcgagatcgagtgcgaggggaaggagaagttcaagtgcgggtccaacg 271
           || | || || ||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 423 tctcagatgatctcgagatcgagtgcgaggggaaggagaagtacaagtgcggatccaacg 482

                            
Query: 272 tcttctggaaatggtga 288
           |||||||||||||||||
Sbjct: 483 tcttctggaaatggtga 499
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>gb|AF052429.1|AF052429 Zea mays photosystem I complex PsaN subunit precursor (psaN) mRNA,
           nuclear gene encoding chloroplast protein, partial cds
          Length = 518

 Score =  343 bits (173), Expect = 3e-91
 Identities = 236/257 (91%)
 Strand = Plus / Plus

                                                                       
Query: 35  tcttcgacgagtacctcgagaagagcaagctcaacaaggagctgaacgacaagaagaggg 94
           ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| 
Sbjct: 87  tcttcgatgagtacctcgagaagagcaaggccaacaaggagctgaacgacaagaagaggc 146

                                                                       
Query: 95  cggcgacgagcggcgccaacttcgcgcgcgcctacaccgtccagttcggcagctgcaagt 154
            ||| || || || |||||||| |||||||||||||||||  |||||||||||||| |||
Sbjct: 147 tggccaccagtggagccaactttgcgcgcgcctacaccgtggagttcggcagctgccagt 206

                                                                       
Query: 155 tcccctacaacttcaccggctgccaggacctcgccaagcagaagaaagtcccgttcatca 214
           |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 207 tcccctacaacttcactgggtgccaggacctcgccaagcagaagaaagtccccttcatca 266

                                                                       
Query: 215 ccgacgacctcgagatcgagtgcgaggggaaggagaagttcaagtgcgggtccaacgtct 274
            ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 267 gcgacgacctcgagattgagtgcgaggggaaggagaagttcaagtgcggctccaacgttt 326

                            
Query: 275 tctggaaatggtgaagc 291
           ||||||| |||||||||
Sbjct: 327 tctggaagtggtgaagc 343
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>gb|AY103702.1| Zea mays PCO139408 mRNA sequence
          Length = 756

 Score =  343 bits (173), Expect = 3e-91
 Identities = 236/257 (91%)
 Strand = Plus / Plus

                                                                       
Query: 35  tcttcgacgagtacctcgagaagagcaagctcaacaaggagctgaacgacaagaagaggg 94
           ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| 
Sbjct: 302 tcttcgatgagtacctcgagaagagcaaggccaacaaggagctgaacgacaagaagaggc 361

                                                                       
Query: 95  cggcgacgagcggcgccaacttcgcgcgcgcctacaccgtccagttcggcagctgcaagt 154
            ||| || || || |||||||| |||||||||||||||||  |||||||||||||| |||
Sbjct: 362 tggccaccagtggagccaactttgcgcgcgcctacaccgtggagttcggcagctgccagt 421

                                                                       
Query: 155 tcccctacaacttcaccggctgccaggacctcgccaagcagaagaaagtcccgttcatca 214
           |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 422 tcccctacaacttcactgggtgccaggacctcgccaagcagaagaaagtccccttcatca 481

                                                                       
Query: 215 ccgacgacctcgagatcgagtgcgaggggaaggagaagttcaagtgcgggtccaacgtct 274
            ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 482 gcgacgacctcgagattgagtgcgaggggaaggagaagttcaagtgcggctccaacgttt 541

                            
Query: 275 tctggaaatggtgaagc 291
           ||||||| |||||||||
Sbjct: 542 tctggaagtggtgaagc 558
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  198 bits (100), Expect = 1e-47
 Identities = 121/128 (94%)
 Strand = Plus / Plus

                                                                           
Query: 71      aggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcctaca 130
               |||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||
Sbjct: 4506194 aggagctgaacgacaagaagaggctggcgacgagcggcgccaacttcgcgagggcgtaca 4506253

                                                                           
Query: 131     ccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgcca 190
               ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4506254 ccgtcgagttcggcagctgccagttcccctacaacttcaccggctgccaggacctcgcca 4506313

                       
Query: 191     agcagaag 198
               ||||||||
Sbjct: 4506314 agcagaag 4506321



 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                           
Query: 197     agaaagtcccgttcatcaccgacgacctcgagatcgagtgcgaggggaaggagaagttca 256
               |||||||||| |||||| | || || ||||||||||||||||||||||||||||||| ||
Sbjct: 4506480 agaaagtcccattcatctcagatgatctcgagatcgagtgcgaggggaaggagaagtaca 4506539

                                               
Query: 257     agtgcgggtccaacgtcttctggaaatggtga 288
               ||||||| ||||||||||||||||||||||||
Sbjct: 4506540 agtgcggatccaacgtcttctggaaatggtga 4506571



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 32      gcgtcttcgacgagtacctcgagaagagcaagctcaacaagg 73
               |||| |||||||||||||||||||||||||||  ||||||||
Sbjct: 4506033 gcgtgttcgacgagtacctcgagaagagcaaggccaacaagg 4506074
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  198 bits (100), Expect = 1e-47
 Identities = 121/128 (94%)
 Strand = Plus / Plus

                                                                           
Query: 71      aggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcctaca 130
               |||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||
Sbjct: 4506175 aggagctgaacgacaagaagaggctggcgacgagcggcgccaacttcgcgagggcgtaca 4506234

                                                                           
Query: 131     ccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgcca 190
               ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4506235 ccgtcgagttcggcagctgccagttcccctacaacttcaccggctgccaggacctcgcca 4506294

                       
Query: 191     agcagaag 198
               ||||||||
Sbjct: 4506295 agcagaag 4506302



 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                           
Query: 197     agaaagtcccgttcatcaccgacgacctcgagatcgagtgcgaggggaaggagaagttca 256
               |||||||||| |||||| | || || ||||||||||||||||||||||||||||||| ||
Sbjct: 4506461 agaaagtcccattcatctcagatgatctcgagatcgagtgcgaggggaaggagaagtaca 4506520

                                               
Query: 257     agtgcgggtccaacgtcttctggaaatggtga 288
               ||||||| ||||||||||||||||||||||||
Sbjct: 4506521 agtgcggatccaacgtcttctggaaatggtga 4506552



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 32      gcgtcttcgacgagtacctcgagaagagcaagctcaacaagg 73
               |||| |||||||||||||||||||||||||||  ||||||||
Sbjct: 4506014 gcgtgttcgacgagtacctcgagaagagcaaggccaacaagg 4506055
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>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129155

 Score =  198 bits (100), Expect = 1e-47
 Identities = 121/128 (94%)
 Strand = Plus / Minus

                                                                         
Query: 71    aggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcctaca 130
             |||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||
Sbjct: 98584 aggagctgaacgacaagaagaggctggcgacgagcggcgccaacttcgcgagggcgtaca 98525

                                                                         
Query: 131   ccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgcca 190
             ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 98524 ccgtcgagttcggcagctgccagttcccctacaacttcaccggctgccaggacctcgcca 98465

                     
Query: 191   agcagaag 198
             ||||||||
Sbjct: 98464 agcagaag 98457



 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                         
Query: 197   agaaagtcccgttcatcaccgacgacctcgagatcgagtgcgaggggaaggagaagttca 256
             |||||||||| |||||| | || || ||||||||||||||||||||||||||||||| ||
Sbjct: 98298 agaaagtcccattcatctcagatgatctcgagatcgagtgcgaggggaaggagaagtaca 98239

                                             
Query: 257   agtgcgggtccaacgtcttctggaaatggtga 288
             ||||||| ||||||||||||||||||||||||
Sbjct: 98238 agtgcggatccaacgtcttctggaaatggtga 98207



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 32    gcgtcttcgacgagtacctcgagaagagcaagctcaacaagg 73
             |||| |||||||||||||||||||||||||||  ||||||||
Sbjct: 98745 gcgtgttcgacgagtacctcgagaagagcaaggccaacaagg 98704
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>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0004B23, complete sequence
          Length = 153136

 Score =  123 bits (62), Expect = 5e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                         
Query: 71    aggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcctaca 130
             |||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||
Sbjct: 39786 aggagctgaacgacaagaagaggctggcgacgagcggcgccaacttcgcgagggcgtaca 39845

                                           
Query: 131   ccgtccagttcggcagctgcaagttcccct 160
             ||||| |||||||||||||| |||||||||
Sbjct: 39846 ccgtcgagttcggcagctgccagttcccct 39875



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 22    gccagggcaagcgtcttcgacgagtacctcgagaagagcaagctcaacaag 72
             |||||||| ||||| |||||||||||| ||||||||||||||  |||||||
Sbjct: 51799 gccagggccagcgtgttcgacgagtacgtcgagaagagcaagaccaacaag 51749



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 22    gccagggcaagcgtcttcgacgagtacctcgagaagagcaagctcaacaagg 73
             ||||||||  |||| |||||||||||||| ||||||||||||  ||||||||
Sbjct: 33088 gccagggccggcgtgttcgacgagtaccttgagaagagcaaggccaacaagg 33139
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  123 bits (62), Expect = 5e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                           
Query: 71      aggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcctaca 130
               |||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||
Sbjct: 8554214 aggagctgaacgacaagaagaggctggcgacgagcggcgccaacttcgcgagggcgtaca 8554273

                                             
Query: 131     ccgtccagttcggcagctgcaagttcccct 160
               ||||| |||||||||||||| |||||||||
Sbjct: 8554274 ccgtcgagttcggcagctgccagttcccct 8554303



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 22      gccagggcaagcgtcttcgacgagtacctcgagaagagcaagctcaacaag 72
               |||||||| ||||| |||||||||||| ||||||||||||||  |||||||
Sbjct: 8566227 gccagggccagcgtgttcgacgagtacgtcgagaagagcaagaccaacaag 8566177



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 22      gccagggcaagcgtcttcgacgagtacctcgagaagagcaagctcaacaagg 73
               ||||||||  |||| |||||||||||||| ||||||||||||  ||||||||
Sbjct: 8547516 gccagggccggcgtgttcgacgagtaccttgagaagagcaaggccaacaagg 8547567
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>gb|DQ175832.1| Hordeum vulgare clone DsB30 Ds insertion site flanking region
           genomic sequence
          Length = 806

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 374 catcgtctctgtaattttatcatcaagtggaatcctgtttttcacctgt 422
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 catcgtctctgtaattttatcatcaagtggaatcctgtttttcacctgt 718
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>gb|AY233207.1| Vitis vinifera putative photosystem I reaction center subunit N
           precursor (PsaN) mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 359

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 178/224 (79%)
 Strand = Plus / Plus

                                                                       
Query: 67  aacaaggagctgaacgacaagaagagggcggcgacgagcggcgccaacttcgcgcgcgcc 126
           ||||||||| ||||||||||||| |||  ||| || ||||| || ||||| ||  | || 
Sbjct: 38  aacaaggagttgaacgacaagaaaaggttggctacaagcggagcaaactttgccagagca 97

                                                                       
Query: 127 tacaccgtccagttcggcagctgcaagttcccctacaacttcaccggctgccaggacctc 186
           ||||| || || || || | ||||||||||||  | |||||||| ||||||||||| |||
Sbjct: 98  tacactgttcaatttggaacctgcaagttccctgagaacttcactggctgccaggatctc 157

                                                                       
Query: 187 gccaagcagaagaaagtcccgttcatcaccgacgacctcgagatcgagtgcgaggggaag 246
           |||||| | || ||||| || ||| |  | || ||||| ||| | ||||| || || | |
Sbjct: 158 gccaagaaaaaaaaagtgcctttcctttctgaagacctagagttggagtgtgaaggaagg 217

                                                       
Query: 247 gagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           || |||| ||||||||| ||||| || |||||||||||||||||
Sbjct: 218 gacaagtacaagtgcggttccaatgttttctggaaatggtgaag 261
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>dbj|AK058774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A07, full
           insert sequence
          Length = 591

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 242 ggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtga 288
           |||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 338 ggaaggagaagtacaagtgcggatccaacgtcttctggaaatggtga 384
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>gb|DQ124073.1| Coffea arabica clone MN-SSH2-D11 mRNA sequence
          Length = 643

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 163 aacttcaccggctgccaggacctcgccaagcagaagaaagtcccgttcatcaccgacgac 222
           |||||||| |||||||| ||||| |||||||| |||||||| || ||  | || || || 
Sbjct: 135 aacttcactggctgccaagacctggccaagcaaaagaaagtgccttttcttactgaggat 76

                                                                       
Query: 223 ctcgagatcgagtgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaa 282
            | ||| | |||||||| || | ||| ||||||||||| || || || || |||||||||
Sbjct: 75  ttggagctggagtgcgaaggcagggacaagttcaagtgtggttcaaatgtgttctggaaa 16

                  
Query: 283 tggtgaa 289
           |||||||
Sbjct: 15  tggtgaa 9
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>ref|NM_125800.3| Arabidopsis thaliana PSI-N; calmodulin binding AT5G64040 (PSI-N)
           transcript variant AT5G64040.1 mRNA, complete cds
          Length = 747

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 462 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 521

                
Query: 199 aaagt 203
           |||||
Sbjct: 522 aaagt 526



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 558 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 613
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>gb|AY081594.1| Arabidopsis thaliana photosystem I reaction center subunit psaN
           precursor (At5g64040) mRNA, complete cds
          Length = 605

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 367 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 426

                
Query: 199 aaagt 203
           |||||
Sbjct: 427 aaagt 431



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 463 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 518
to top
>gb|AY062835.1| Arabidopsis thaliana photosystem I reaction centre subunit psaN
           precursor (At5g64040; MHJ24.2) mRNA, complete cds
          Length = 685

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 423 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 482

                
Query: 199 aaagt 203
           |||||
Sbjct: 483 aaagt 487



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 519 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 574
to top
>emb|BX829690.1|CNS0A1EX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB2ZD07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 691

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 414 ttcggaagctgcaagttccctgaaaatttcactggctgccaagatcttgccaagcaaaag 473

                
Query: 199 aaagt 203
           |||||
Sbjct: 474 aaagt 478
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>emb|BX834109.1|CNS0A0GR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL9ZF02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 650

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 374 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 433

                
Query: 199 aaagt 203
           |||||
Sbjct: 434 aaagt 438



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 470 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 525
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>emb|BX830459.1|CNS09YUQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB83ZA11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 639

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 401 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 460

                
Query: 199 aaagt 203
           |||||
Sbjct: 461 aaagt 465



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 497 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 552
to top
>gb|U32176.1|ATU32176 Arabidopsis thaliana photosystem I PSI-N mRNA, nuclear gene
           encoding chloroplast protein, complete cds
          Length = 637

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || ||||| |||||||| || || |||||||| |||
Sbjct: 397 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagcaaaag 456

                
Query: 199 aaagt 203
           |||||
Sbjct: 457 aaagt 461



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 493 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 548
to top
>ref|NM_001037056.1| Arabidopsis thaliana PSI-N; calmodulin binding AT5G64040 (PSI-N)
           transcript variant AT5G64040.2 mRNA, complete cds
          Length = 950

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 761 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 816



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagca 194
           ||||| ||||||||||||||  | || ||||| |||||||| || || ||||||||
Sbjct: 573 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagca 628
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>emb|BX833455.1|CNS0A0LJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL56ZH04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 647

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 511 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 566



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaag 198
           ||||| ||||||||||||||  | || || || |||||||| || || |||||||| |||
Sbjct: 415 ttcggaagctgcaagttccctgagaattttactggctgccaagatcttgccaagcaaaag 474

                
Query: 199 aaagt 203
           |||||
Sbjct: 475 aaagt 479
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>emb|BX841638.1|CNS09YLQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB87ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 637

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 235 tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
           ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 498 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 553



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 53/62 (85%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                       
Query: 139 ttcggcagctgcaagttcccct-acaacttcaccggctgccaggacctcgccaagcagaa 197
           ||||| |||||||||||||||| | || ||||| |||||||| || || |||||||| ||
Sbjct: 401 ttcggaagctgcaagttcccctgagaatttcactggctgccaagatcttgccaagcaaaa 460

             
Query: 198 ga 199
           ||
Sbjct: 461 ga 462
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>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24
          Length = 48622

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 235  tgcgaggggaaggagaagttcaagtgcgggtccaacgtcttctggaaatggtgaag 290
            ||||| || ||||| |||| |||||| || ||||| || |||||||||||||||||
Sbjct: 2183 tgcgaaggcaaggacaagtacaagtgtggttccaatgttttctggaaatggtgaag 2128



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 139  ttcggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagca 194
            ||||| ||||||||||||||  | || ||||| |||||||| || || ||||||||
Sbjct: 2371 ttcggaagctgcaagttccctgagaatttcactggctgccaagatcttgccaagca 2316
to top
>dbj|AK078482.1| Mus musculus 12 days embryo female mullerian duct includes
           surrounding region cDNA, RIKEN full-length enriched
           library, clone:6820408C15 product:weakly similar to
           DJ1103G7.2 (NOVEL PROTEIN) [Homo sapiens], full insert
           sequence
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 58  agcaagctcaacaaggagctga 79
           ||||||||||||||||||||||
Sbjct: 762 agcaagctcaacaaggagctga 783
to top
>gb|AC008136.4|AC008136 Drosophila melanogaster, chromosome 3R, region 88D-88E, BAC clone
              BACR08H11, complete sequence
          Length = 154890

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    ctggaaatggtgaagctggtcg 297
              ||||||||||||||||||||||
Sbjct: 139243 ctggaaatggtgaagctggtcg 139222
to top
>gb|AC005721.3|AC005721 Drosophila melanogaster, chromosome 3R, region 88D8-88E1, BAC clone
              BACR48E23, complete sequence
          Length = 203183

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    ctggaaatggtgaagctggtcg 297
              ||||||||||||||||||||||
Sbjct: 116862 ctggaaatggtgaagctggtcg 116841
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>gb|AF492824.1| Phaseolus vulgaris photosystem I-N subunit (PSI-N) mRNA, complete
           cds
          Length = 816

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 142 ggcagctgcaagttcccctacaacttcaccggctgccaggacctcgccaagcagaagaaa 201
           ||||| |||||||||||  | |||||||| || |||||||| || || ||||| ||||||
Sbjct: 501 ggcagttgcaagttccctgaaaacttcactggttgccaggatctagctaagcaaaagaaa 560

             
Query: 202 gt 203
           ||
Sbjct: 561 gt 562
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>ref|NM_177656.2| Mus musculus RIKEN cDNA 6820408C15 gene (6820408C15Rik), mRNA
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 58  agcaagctcaacaaggagctga 79
           ||||||||||||||||||||||
Sbjct: 762 agcaagctcaacaaggagctga 783
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>gb|AE003706.5| Drosophila melanogaster chromosome 3R, section 44 of 118 of the complete
              sequence
          Length = 270961

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    ctggaaatggtgaagctggtcg 297
              ||||||||||||||||||||||
Sbjct: 253389 ctggaaatggtgaagctggtcg 253368
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>emb|AL844517.6| Mouse DNA sequence from clone RP23-453K8 on chromosome 2, complete
             sequence
          Length = 98792

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 58    agcaagctcaacaaggagctga 79
             ||||||||||||||||||||||
Sbjct: 15059 agcaagctcaacaaggagctga 15080
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>ref|XM_482762.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 95  cggcgacgagcggcgccaacttcgc 119
           ||||||||||| |||||||||||||
Sbjct: 225 cggcgacgagcagcgccaacttcgc 201
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>emb|AJ719967.1| Gallus gallus mRNA for hypothetical protein, clone 8n22
          Length = 1616

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 2   ccgccgcctccgccggctccgccag 26
           ||||||||||||||| |||||||||
Sbjct: 261 ccgccgcctccgccgcctccgccag 237
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>ref|NM_001006308.1| Gallus gallus WD repeat domain 57 (U5 snRNP specific) (WDR57), mRNA
          Length = 1616

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 2   ccgccgcctccgccggctccgccag 26
           ||||||||||||||| |||||||||
Sbjct: 261 ccgccgcctccgccgcctccgccag 237
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 95       cggcgacgagcggcgccaacttcgc 119
                ||||||||||| |||||||||||||
Sbjct: 22401386 cggcgacgagcagcgccaacttcgc 22401362
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 95    cggcgacgagcggcgccaacttcgc 119
             ||||||||||| |||||||||||||
Sbjct: 98369 cggcgacgagcagcgccaacttcgc 98345
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>dbj|AK108546.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D11, full
           insert sequence
          Length = 551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 95  cggcgacgagcggcgccaacttcgc 119
           ||||||||||| |||||||||||||
Sbjct: 225 cggcgacgagcagcgccaacttcgc 201
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>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete
             sequence
          Length = 200458

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   ttcaccggctgccaggacctc 186
             |||||||||||||||||||||
Sbjct: 35143 ttcaccggctgccaggacctc 35163
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      acctcgagaagagcaagctc 66
               ||||||||||||||||||||
Sbjct: 1953979 acctcgagaagagcaagctc 1953998
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>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence
          Length = 171235

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cgagtgcgaggggaaggaga 250
             ||||||||||||||||||||
Sbjct: 32150 cgagtgcgaggggaaggaga 32169
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 1       gccgccgcctccgccggctccgcc 24
               ||||||| ||||||||||||||||
Sbjct: 4086391 gccgccggctccgccggctccgcc 4086368
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     gaaatggtgaagctggtcga 298
               ||||||||||||||||||||
Sbjct: 1667670 gaaatggtgaagctggtcga 1667689
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>gb|AC110521.14| Mus musculus chromosome 12, clone RP23-50H15, complete sequence
          Length = 189474

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gccgccgcctccgccggctc 20
             ||||||||||||||||||||
Sbjct: 97617 gccgccgcctccgccggctc 97598
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>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete
            sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 239  aggggaaggagaagttcaag 258
            ||||||||||||||||||||
Sbjct: 2801 aggggaaggagaagttcaag 2820
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>ref|XM_853225.1| PREDICTED: Canis familiaris similar to neurobeachin, transcript
          variant 4 (LOC477305), mRNA
          Length = 9688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gccgccgcctccgccggctccgcc 24
          |||||||||||||||| |||||||
Sbjct: 99 gccgccgcctccgccgcctccgcc 76
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>ref|XM_534497.2| PREDICTED: Canis familiaris similar to neurobeachin, transcript
          variant 1 (LOC477305), mRNA
          Length = 9775

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gccgccgcctccgccggctccgcc 24
          |||||||||||||||| |||||||
Sbjct: 99 gccgccgcctccgccgcctccgcc 76
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>ref|XM_844120.1| PREDICTED: Canis familiaris similar to neurobeachin, transcript
          variant 2 (LOC477305), mRNA
          Length = 9784

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gccgccgcctccgccggctccgcc 24
          |||||||||||||||| |||||||
Sbjct: 99 gccgccgcctccgccgcctccgcc 76
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>ref|XM_542808.2| PREDICTED: Canis familiaris similar to forkhead box L2 (LOC485688),
           mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   gccgccgcctccgccggctccgcc 24
           |||||||||||||||| |||||||
Sbjct: 993 gccgccgcctccgccgcctccgcc 970
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>ref|XM_742731.1| Aspergillus fumigatus Af293 actin associated protein (Afu6g02540)
            partial mRNA
          Length = 1932

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    ccgccgcctccgccggctcc 21
            ||||||||||||||||||||
Sbjct: 1555 ccgccgcctccgccggctcc 1574
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>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete sequence
          Length = 186172

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    gccaagcagaagaaagtccc 206
              ||||||||||||||||||||
Sbjct: 100948 gccaagcagaagaaagtccc 100967
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>gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, complete sequence
          Length = 189936

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    aggggaaggagaagttcaag 258
              ||||||||||||||||||||
Sbjct: 104181 aggggaaggagaagttcaag 104200
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>gb|AC161232.7| Mus musculus chromosome 3, clone RP24-369J22, complete sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    catcaagtggaatcctgttt 413
              ||||||||||||||||||||
Sbjct: 185725 catcaagtggaatcctgttt 185706
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>gb|DQ278876.1| Gallus gallus Lin-41 mRNA, complete cds
          Length = 3080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    gccgccgcctccgccggctccgcc 24
            |||||||||||||||||| |||||
Sbjct: 1203 gccgccgcctccgccggccccgcc 1226
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>ref|XM_968159.1| PREDICTED: Tribolium castaneum similar to CG5873-PA (LOC662034), mRNA
          Length = 2601

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gcgtcttcgacgagtacctc 51
            ||||||||||||||||||||
Sbjct: 2042 gcgtcttcgacgagtacctc 2061
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>emb|BX050838.1|CNS09BE2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC27CC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 908

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   ccgccgcctccgccggctcc 21
           ||||||||||||||||||||
Sbjct: 420 ccgccgcctccgccggctcc 401
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      gccgccgcctccgccggctccgcc 24
              ||||||| ||||||||||||||||
Sbjct: 276973 gccgccggctccgccggctccgcc 276950
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>gb|AC177796.2| Mus musculus chromosome 3, clone wi1-1134L22, complete sequence
          Length = 36913

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  catcaagtggaatcctgttt 413
            ||||||||||||||||||||
Sbjct: 5217 catcaagtggaatcctgttt 5198
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      gccgccgcctccgccggctccgcc 24
              ||||||| ||||||||||||||||
Sbjct: 280386 gccgccggctccgccggctccgcc 280363
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     gccgcctccgccggctccgccagg 27
             |||||||||||||||||| |||||
Sbjct: 52757 gccgcctccgccggctcctccagg 52734
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>emb|AJ719919.1| Gallus gallus mRNA for hypothetical protein, clone 8d24
          Length = 4509

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ccgccgcctccgccggctcc 21
            ||||||||||||||||||||
Sbjct: 4472 ccgccgcctccgccggctcc 4453
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>ref|NM_001012835.1| Gallus gallus guanine nucleotide binding protein (G protein), beta
            polypeptide 1 (GNB1), mRNA
          Length = 4509

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ccgccgcctccgccggctcc 21
            ||||||||||||||||||||
Sbjct: 4472 ccgccgcctccgccggctcc 4453
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>gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequence
          Length = 43141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     ccgccgcctccgccggctccgcca 25
             ||||||||||||||| ||||||||
Sbjct: 33177 ccgccgcctccgccgcctccgcca 33154
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>dbj|AK128712.1| Homo sapiens cDNA FLJ46879 fis, clone UTERU3015011, highly  similar
           to Paxillin
          Length = 4132

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   ccgccgcctccgccggctcc 21
           ||||||||||||||||||||
Sbjct: 359 ccgccgcctccgccggctcc 340
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>ref|XM_396585.2| PREDICTED: Apis mellifera similar to CG4928-PB, isoform B
          (LOC413134), mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gccgccgcctccgccggctccgcc 24
          |||||||||||||||| |||||||
Sbjct: 66 gccgccgcctccgccgtctccgcc 43
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 93       ggcggcgacgagcggcgcca 112
                ||||||||||||||||||||
Sbjct: 18802582 ggcggcgacgagcggcgcca 18802563
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>gb|AY012161.1| Salmonella enterica subsp. V isolate M1656 phosphomannomutase (manB)
            gene, complete cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gcctccgccggctccgccag 26
            ||||||||||||||||||||
Sbjct: 1166 gcctccgccggctccgccag 1147
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>gb|AY012160.1| Salmonella enterica subsp. V isolate M1633 phosphomannomutase (manB)
            gene, complete cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gcctccgccggctccgccag 26
            ||||||||||||||||||||
Sbjct: 1166 gcctccgccggctccgccag 1147
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>gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative arylamine N-acetyltransferase,
            putative hydrolase, putative transmembrane efflux
            protein, putative transcriptional regulator, putative
            ribonuclease HII, putative ATP-dependent DNA helicase,
            putative bifunctional enzyme deaminase/reductase genes,
            complete cds; kinamycin biosynthetic gene cluster,
            partial sequence and unknown genes
          Length = 34564

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    cgcctccgccggctccgcca 25
            ||||||||||||||||||||
Sbjct: 8530 cgcctccgccggctccgcca 8511
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>gb|AF543530.1| Pinus taeda (+)-alpha-pinene synthase mRNA, complete cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ttcgacgagtacctcgagaa 56
            ||||||||||||||||||||
Sbjct: 1405 ttcgacgagtacctcgagaa 1424
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 1       gccgccgcctccgccggctccgcc 24
               |||||||||||||||| |||||||
Sbjct: 2811583 gccgccgcctccgccgcctccgcc 2811560
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>gb|AF158634.1|AF158634 Triticum ventricosum Vrga1 (Vrga1) gene, complete cds
          Length = 4875

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   caacaaggagctgaacgaca 85
            ||||||||||||||||||||
Sbjct: 1194 caacaaggagctgaacgaca 1213
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>ref|XM_309714.2| Anopheles gambiae str. PEST ENSANGP00000012581 (ENSANGG00000010092),
            partial mRNA
          Length = 4743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    gccgccgcctccgccggctccgcc 24
            ||||||||||||||| ||||||||
Sbjct: 1847 gccgccgcctccgccagctccgcc 1824
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>dbj|AK107737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G04, full
           insert sequence
          Length = 844

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ggcggcgacgagcggcgcca 112
           ||||||||||||||||||||
Sbjct: 545 ggcggcgacgagcggcgcca 526
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 141    cggcagctgcaagttcccctacaacttcaccg 172
              |||||||| ||||||| || ||||||||||||
Sbjct: 274626 cggcagctacaagttcaccgacaacttcaccg 274657
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>gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, complete sequence
          Length = 106921

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ccgccgcctccgccggctcc 21
             ||||||||||||||||||||
Sbjct: 24649 ccgccgcctccgccggctcc 24668
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
              sequence
          Length = 243313

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    cgagtgcgaggggaaggaga 250
              ||||||||||||||||||||
Sbjct: 219072 cgagtgcgaggggaaggaga 219091
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>gb|DQ117917.1| Gallus gallus LIN-41 (LIN-41) mRNA, partial cds
          Length = 4855

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   gccgccgcctccgccggctccgcc 24
           |||||||||||||||||| |||||
Sbjct: 298 gccgccgcctccgccggccccgcc 321
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     gtaattttatcatcaagtgg 403
               ||||||||||||||||||||
Sbjct: 1181457 gtaattttatcatcaagtgg 1181476
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>dbj|AB209034.1| Homo sapiens mRNA for Paxillin variant protein
          Length = 5457

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ccgccgcctccgccggctcc 21
            ||||||||||||||||||||
Sbjct: 1992 ccgccgcctccgccggctcc 1973
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>emb|AL928840.8| Mouse DNA sequence from clone RP24-233J2 on chromosome 2, complete
            sequence
          Length = 35917

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ctgatgtatgtcagtcaggc 329
            ||||||||||||||||||||
Sbjct: 1380 ctgatgtatgtcagtcaggc 1361
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>emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chromosome X, complete
              sequence
          Length = 160831

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    tgtaattttatcatcaagtg 402
              ||||||||||||||||||||
Sbjct: 108593 tgtaattttatcatcaagtg 108574
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>gb|AF478411.1| Chlamydomonas reinhardtii iron transporter Ftr1 (FTR1) mRNA, complete
            cds
          Length = 2833

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    gccgccgcctccgccggctccgcc 24
            |||||||||||||||| |||||||
Sbjct: 1718 gccgccgcctccgccgcctccgcc 1695
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>emb|AL591712.18| Mouse DNA sequence from clone RP23-138C10 on chromosome 2, complete
              sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    ctgatgtatgtcagtcaggc 329
              ||||||||||||||||||||
Sbjct: 168338 ctgatgtatgtcagtcaggc 168319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,411,800
Number of Sequences: 3902068
Number of extensions: 3411800
Number of successful extensions: 94892
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94095
Number of HSP's gapped (non-prelim): 784
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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