ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for ... 773 0.0
2gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome... 153 5e-34
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
4dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
5dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
6dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 153 5e-34
8dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, ... 153 5e-34
9gb|AY105650.1| Zea mays PCO135935 mRNA sequence 143 5e-31
10gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein... 143 5e-31
11gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein... 121 2e-24
12gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light h... 113 5e-22
13gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence 50 0.006
14emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP... 50 0.006
15dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, c... 46 0.088
16gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome... 42 1.4
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19gb|U25812.1|PSU25812 Pseudomonas syringae pv. syringae hrp gene ... 42 1.4
20gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, c... 40 5.4
21ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, n... 40 5.4
22ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-... 40 5.4
23ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-... 40 5.4
24gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome... 40 5.4
25emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on ch... 40 5.4
26ref|XM_883654.1| Candida albicans SC5314 hypothetical protein (C... 40 5.4
27ref|XM_707383.1| Candida albicans SC5314 potential guanine nucle... 40 5.4
28gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 5.4
29gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 5.4
30gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 5.4
31emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (... 40 5.4
32emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on ch... 40 5.4
33gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.4
34dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP30210... 40 5.4
35dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY20152... 40 5.4
36dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173 40 5.4
37dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA20050... 40 5.4
38gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, c... 40 5.4
39emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in ... 40 5.4
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
41emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
42gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA 40 5.4
43dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.4
44dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249,... 40 5.4
45gb|U68715.1|BFU68715 Botryotinia fuckeliana endopolygalacturonas... 40 5.4
46dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 5.4
47emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-9... 40 5.4
48gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene... 40 5.4 
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
            binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  773 bits (390), Expect = 0.0
 Identities = 393/394 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2132 ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 2191

                                                                        
Query: 61   caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgtgagctgg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2192 caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgtgagctgg 2251

                                                                        
Query: 121  ccgttgattgcccgtccgccgccgtcggctgttgatgctcagctgcatgcgtgcgtgcga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2252 ccgttgattgcccgtccgccgccgtcggctgttgatgctcagctgcatgcgtgcgtgcga 2311

                                                                        
Query: 181  tgcagcatgatgtgctgtgtgaattttaccggggaaaagtatgagagtacgaatgtgccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2312 tgcagcatgatgtgctgtgtgaattttaccggggaaaagtatgagagtacgaatgtgccg 2371

                                                                        
Query: 241  tatgtgtaaattatcaagggcagaagaaacatgaccgttctgatttctgatgggagtttc 300
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 tacgtgtaaattatcaagggcagaagaaacatgaccgttctgatttctgatgggagtttc 2431

                                                                        
Query: 301  ggaccactgctacttgagtaatttctcaaatgttttcatcatcgttctgatttctgatgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 ggaccactgctacttgagtaatttctcaaatgttttcatcatcgttctgatttctgatgg 2491

                                              
Query: 361  gagtttcggaccactgctacttgagtaatttctc 394
            ||||||||||||||||||||||||||||||||||
Sbjct: 2492 gagtttcggaccactgctacttgagtaatttctc 2525



 Score =  141 bits (71), Expect = 2e-30
 Identities = 71/71 (100%)
 Strand = Plus / Plus

                                                                        
Query: 276  cgttctgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgttt 335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2474 cgttctgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgttt 2533

                       
Query: 336  tcatcatcgtt 346
            |||||||||||
Sbjct: 2534 tcatcatcgtt 2544
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>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
             |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 40149 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 40208

                                                                  
Query: 61    caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
             ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 40209 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 40261
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                           
Query: 1       ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
               |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 7581063 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 7581122

                                                                    
Query: 61      caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
               ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 7581123 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 7581175
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>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full
           insert sequence
          Length = 1157

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
           |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 828 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 887

                                                                
Query: 61  caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
           ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 888 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 940
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>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full
           insert sequence
          Length = 1101

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
           |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 818 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 877

                                                                
Query: 61  caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
           ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 878 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 930
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>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full
           insert sequence
          Length = 1186

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
           |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 829 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 888

                                                                
Query: 61  caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
           ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 889 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 941
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                           
Query: 1       ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
               |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 7651150 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 7651209

                                                                    
Query: 61      caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
               ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 7651210 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 7651262
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>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence
          Length = 556

 Score =  153 bits (77), Expect = 5e-34
 Identities = 104/113 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
           |||||||||||||||||| ||| |||||||||| | |   ||||||||||||||||||||
Sbjct: 283 ctacgtcaccggcgagggccccgtcgagaacctctccaagcacctcagcgaccccttcgg 342

                                                                
Query: 61  caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgt 113
           ||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 343 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgt 395
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>gb|AY105650.1| Zea mays PCO135935 mRNA sequence
          Length = 1366

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
            ||||||||||||||| || ||| ||||||||||   |   ||||||||||||||||||||
Sbjct: 913  ctacgtcaccggcgaaggccccgtcgagaacctcgccaagcacctcagcgaccccttcgg 972

                                                                    
Query: 61   caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgtgag 116
            ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 973  caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgtgag 1028
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>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA,
           complete cds
          Length = 957

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcgg 60
           ||||||||||||||| || ||| ||||||||||   |   ||||||||||||||||||||
Sbjct: 771 ctacgtcaccggcgaaggccccgtcgagaacctcgccaagcacctcagcgaccccttcgg 830

                                                                   
Query: 61  caacaacctgctcaccgtcatctccggcgccgccgagagggtgcccagcctgtgag 116
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 831 caacaacctgctcaccgtcatctccggcgccgccgagaggacgcccagcctgtgag 886
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>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA,
           complete cds
          Length = 1073

 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                       
Query: 41  cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 868

                        
Query: 101 gtgcccagcctgt 113
             ||| |||||||
Sbjct: 869 acgcctagcctgt 881
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>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein
           mRNA, partial cds
          Length = 364

 Score =  113 bits (57), Expect = 5e-22
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                       
Query: 41  cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 100
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 121 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctctggtgccgccgagagg 180

                        
Query: 101 gtgcccagcctgt 113
           |  ||||||||||
Sbjct: 181 gcacccagcctgt 193
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>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence
          Length = 1196

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 50  gaccccttcggcaacaacctgctcaccgtcatc 82
           |||||||| ||||||||| ||||||||||||||
Sbjct: 875 gacccctttggcaacaacttgctcaccgtcatc 907
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>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide
          Length = 2327

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 50   gaccccttcggcaacaacctgctcaccgtcatc 82
            |||||||| ||||||||| ||||||||||||||
Sbjct: 1907 gacccctttggcaacaacttgctcaccgtcatc 1939
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>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds
          Length = 952

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 49  cgaccccttcggcaacaacctgctcaccgtc 79
           ||||||||||||| |||||||||| ||||||
Sbjct: 853 cgaccccttcggctacaacctgctgaccgtc 883
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>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence
          Length = 167532

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   catgatgtgctgtgtgaattt 206
             |||||||||||||||||||||
Sbjct: 74536 catgatgtgctgtgtgaattt 74556
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 75       ccgtcatctccggcgccgccg 95
                |||||||||||||||||||||
Sbjct: 23574600 ccgtcatctccggcgccgccg 23574580
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>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481H08
          Length = 146841

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    ccgtcatctccggcgccgccg 95
             |||||||||||||||||||||
Sbjct: 55564 ccgtcatctccggcgccgccg 55544
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>gb|U25812.1|PSU25812 Pseudomonas syringae pv. syringae hrp gene cluster, hrpU, hrpW,
           hrpO, hrpX, and hrpY genes, complete cds, and hrpU2,
           partial cds
          Length = 3672

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 54  ccttcggcaacaacctgctcaccgt 78
           ||||||||||| |||||||||||||
Sbjct: 512 ccttcggcaaccacctgctcaccgt 488
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>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence
          Length = 136076

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    ccgagagggtgcccagcctg 112
             ||||||||||||||||||||
Sbjct: 97852 ccgagagggtgcccagcctg 97871
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>ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 3, mRNA
          Length = 3105

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2638 gagggtgcccagcctgtgag 2657
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>ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 2, mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2689 gagggtgcccagcctgtgag 2708
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>ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 1, mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2734 gagggtgcccagcctgtgag 2753
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>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     ccgagagggtgcccagcctg 112
              ||||||||||||||||||||
Sbjct: 152275 ccgagagggtgcccagcctg 152256
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>emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on chromosome 9p12-13.3
             Contains the 3' end of a novel gene (FLJ22611), a novel
             gene, the GRHPR gene for glyoxylate
             reductase/hydroxypyruvate reductase, a novel gene
             (KIAA0354), a novel pseuodgene and a CpG island, complete
             sequence
          Length = 192336

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 304   ccactgctacttgagtaatttctcaaat 331
             |||||||||||| |||||||||| ||||
Sbjct: 21832 ccactgctacttaagtaatttctaaaat 21805
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>ref|XM_883654.1| Candida albicans SC5314 hypothetical protein (CaJ7.0138) partial
           mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 45  tcagcgaccccttcggcaacaacc 68
           |||||||||||||||||| |||||
Sbjct: 611 tcagcgaccccttcggcaccaacc 588
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>ref|XM_707383.1| Candida albicans SC5314 potential guanine nucleotide exchange
           factor eIF-2B alpha subunit (GCN3) partial mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 45  tcagcgaccccttcggcaacaacc 68
           |||||||||||||||||| |||||
Sbjct: 611 tcagcgaccccttcggcaccaacc 588
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>gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5198635),
            partial cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 1213 gagggtgcccagcctgtgag 1232
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>gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), transcript variant 1, mRNA (cDNA
            clone MGC:65158 IMAGE:5726473), complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2498 gagggtgcccagcctgtgag 2517
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>gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5196107),
            partial cds
          Length = 2860

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2397 gagggtgcccagcctgtgag 2416
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>emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (from clone DKFZp547A0817)
          Length = 3149

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2732 gagggtgcccagcctgtgag 2751
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>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete
             sequence
          Length = 211513

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cagcatgatgtgctgtgtga 202
             ||||||||||||||||||||
Sbjct: 62107 cagcatgatgtgctgtgtga 62126
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 61     caacaacctgctcaccgtcatctccggc 88
              ||||||| | ||||||||||||||||||
Sbjct: 391965 caacaacatcctcaccgtcatctccggc 391992
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>dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP3021019, highly  similar
            to Protein-tyrosine phosphatase, non-receptor type 5 (EC
            3.1.3.48)
          Length = 3871

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 3472 gagggtgcccagcctgtgag 3491
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>dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY2015251, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2965

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2598 gagggtgcccagcctgtgag 2617
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>dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173
          Length = 1074

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  gagggtgcccagcctgtgag 116
           ||||||||||||||||||||
Sbjct: 675 gagggtgcccagcctgtgag 694
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>dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA2005079, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2299

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 1900 gagggtgcccagcctgtgag 1919
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>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence
          Length = 189230

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     gagggtgcccagcctgtgag 116
              ||||||||||||||||||||
Sbjct: 153741 gagggtgcccagcctgtgag 153760
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>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5, complete
              sequence
          Length = 176078

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    cagctgcatgcgtgcgtgcg 179
              ||||||||||||||||||||
Sbjct: 134587 cagctgcatgcgtgcgtgcg 134568
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 76       cgtcatctccggcgccgccgagag 99
                ||||||||||||||||| ||||||
Sbjct: 10937428 cgtcatctccggcgccggcgagag 10937451
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>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12,
             complete sequence
          Length = 122766

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    cgtcatctccggcgccgccgagag 99
             ||||||||||||||||| ||||||
Sbjct: 40493 cgtcatctccggcgccggcgagag 40516
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>gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 1213 gagggtgcccagcctgtgag 1232
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 61      caacaacctgctcaccgtcatctccggc 88
               ||||||| |||||||||||||| |||||
Sbjct: 6048224 caacaacgtgctcaccgtcatcaccggc 6048197
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>dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249, full insert sequence
          Length = 2837

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   gagggtgcccagcctgtgag 116
            ||||||||||||||||||||
Sbjct: 2422 gagggtgcccagcctgtgag 2441
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>gb|U68715.1|BFU68715 Botryotinia fuckeliana endopolygalacturonase 1 (BcPGA1) gene,
           complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 139 ccgccgtcggctgttgatgc 158
           ||||||||||||||||||||
Sbjct: 688 ccgccgtcggctgttgatgc 669
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     tcagcgaccccttcggcaacaacc 68
              |||||||||||||||||| |||||
Sbjct: 255017 tcagcgaccccttcggcaccaacc 254994
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>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177792

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    atgctcagctgcatgcgtgc 174
              ||||||||||||||||||||
Sbjct: 109033 atgctcagctgcatgcgtgc 109052
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>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                        
Query: 4    cgtcaccggcgaggggcccttcgagaacctgtgcgcccacctcagcgaccccttcggcaa 63
            |||||||||| |||| ||| |||||||||||  || |||| ||  ||||||| ||| |||
Sbjct: 1432 cgtcaccggcaagggccccatcgagaacctggccgaccacatcgccgaccccgtcgccaa 1491

                
Query: 64   caac 67
            ||||
Sbjct: 1492 caac 1495


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,479,954
Number of Sequences: 3902068
Number of extensions: 3479954
Number of successful extensions: 65989
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65629
Number of HSP's gapped (non-prelim): 352
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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