Clone Name | baak4f03 |
---|---|
Clone Library Name | barley_pub |
>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger| 3) (OsCAX3) Length = 417 Score = 143 bits (360), Expect = 4e-34 Identities = 68/71 (95%), Positives = 71/71 (100%) Frame = +3 Query: 15 FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194 FCVV+GWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLML+LCYLIVAASF Sbjct: 347 FCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASF 406 Query: 195 FVHVDPQASDD 227 FVHVDPQ+SDD Sbjct: 407 FVHVDPQSSDD 417
>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger| 2) (OsCAX2) Length = 437 Score = 128 bits (322), Expect = 1e-29 Identities = 59/71 (83%), Positives = 68/71 (95%) Frame = +3 Query: 15 FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194 FCVV+GW+MGQ+MDLNFQLFETATLFITVLVVAFMLQ+G +NY KGLML+LCYLIVAASF Sbjct: 366 FCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASF 425 Query: 195 FVHVDPQASDD 227 FVHVDP +S++ Sbjct: 426 FVHVDPDSSNN 436
>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)| exchanger 4) (OsCAX4) Length = 447 Score = 110 bits (274), Expect = 4e-24 Identities = 51/68 (75%), Positives = 59/68 (86%) Frame = +3 Query: 15 FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194 FCVV+GWMMG+ MDLNF LFETA+L TVLVVAF+LQDG +N +KGLML LCYLIVAASF Sbjct: 371 FCVVMGWMMGKPMDLNFHLFETASLLTTVLVVAFLLQDGTSNCVKGLMLFLCYLIVAASF 430 Query: 195 FVHVDPQA 218 +VH DP + Sbjct: 431 YVHADPNS 438
>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger| 1a) (OsCAX1a) Length = 451 Score = 83.2 bits (204), Expect = 5e-16 Identities = 36/64 (56%), Positives = 51/64 (79%) Frame = +3 Query: 21 VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200 V+V W+MG +MDL+F+L ET +LF+ VLV AF LQDG ++YLKG++L+LCY+++ A FFV Sbjct: 365 VLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFV 424 Query: 201 HVDP 212 P Sbjct: 425 ARQP 428
>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger| 1b) (OsCAX1b) Length = 453 Score = 77.8 bits (190), Expect = 2e-14 Identities = 34/60 (56%), Positives = 46/60 (76%) Frame = +3 Query: 21 VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200 V+V W MG MDL+F L ET +LF+ +LV AF LQ+G ++YLKGL+LVLCY +++ FFV Sbjct: 375 VIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434
>VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar Ca(2+)/H(+)| exchanger) (High copy number undoes manganese protein 1) (Manganese resistance 1 protein) Length = 411 Score = 69.7 bits (169), Expect = 5e-12 Identities = 31/70 (44%), Positives = 48/70 (68%) Frame = +3 Query: 15 FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194 F V+VGWM+ M LNF FETATLFI V + +++ DG +N+L+G+M + Y+++A +F Sbjct: 336 FMVLVGWMIDVPMTLNFSTFETATLFIAVFLSNYLILDGESNWLEGVMSLAMYILIAMAF 395 Query: 195 FVHVDPQASD 224 F + D + D Sbjct: 396 FYYPDEKTLD 405
>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger| 1c) (OsCAX1c) Length = 450 Score = 60.1 bits (144), Expect = 4e-09 Identities = 28/60 (46%), Positives = 39/60 (65%) Frame = +3 Query: 21 VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200 ++V W+ MDL+F L ET +L + V+ AF LQD +YLKGL LV Y+++A FFV Sbjct: 379 LIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFV 438
>YN61_YEAST (P42839) Protein YNL321W| Length = 908 Score = 35.4 bits (80), Expect = 0.11 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +3 Query: 45 QKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFF 197 Q L F ++ +V + ++ +G +NY KG ML+L Y+I+ F+ Sbjct: 851 QMFPLVFPRWDIFGAMTSVFMFTYLYAEGKSNYFKGSMLILLYIIIVVGFY 901
>AT5G2_SHEEP (Q06056) ATP synthase lipid-binding protein, mitochondrial| precursor (EC 3.6.3.14) (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit C) Length = 143 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = -2 Query: 444 ENLTD*SHSSLAMKGPPRNELLSPCRRFSQDAAS 343 E LTD SHSSLA+ P L+P R F A S Sbjct: 34 ETLTDESHSSLAVVPRPLTTSLTPSRSFQTSAIS 67
>AT5G2_BOVIN (P07926) ATP synthase lipid-binding protein, mitochondrial| precursor (EC 3.6.3.14) (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit C) Length = 143 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = -2 Query: 444 ENLTD*SHSSLAMKGPPRNELLSPCRRFSQDAAS 343 E LTD SHSSLA+ P L+P R F A S Sbjct: 34 ETLTDESHSSLAVVPRPLTTSLTPSRSFQTSAIS 67
>HMDH_GIBFU (Q12577) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC| 1.1.1.34) (HMG-CoA reductase) Length = 976 Score = 29.6 bits (65), Expect = 6.1 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 343 GQAGLY*RGSGGLPE*D*RVIGGIWYSNY-SVCCWSWRQSSSLACGSTWTKKLAATIR*H 167 G A L+ R S +P+ +I G + N ++C +R SS++ TW L I Sbjct: 258 GDAPLFGRKSSSIPKFKVLMILGFIFVNIVNICSIPFRNPSSMSTIRTWASSLGGVIA-- 315 Query: 166 RTSISPFK 143 S+ PFK Sbjct: 316 PLSVDPFK 323
>ACES_ANOST (P56161) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| Length = 664 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 395 RAMSCCRRAVVSVRMLLRTGRALLEGERW 309 R RR V+SV RTG LEGE W Sbjct: 525 RERDLSRRMVLSVSEFARTGNPALEGEHW 553
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -3 Query: 452 IRKKI*QINPTAVWL*RDHRAMSCCRRAVVSVRMLLRTGRALLEGERWLTG 300 +R++ + TAVW+ R +RA C R V LR +A ++ + W G Sbjct: 2194 MRRRFLSLRKTAVWVQRKYRAKVCTRHHV----QQLRLQKAAIKIQSWYRG 2240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,717,948 Number of Sequences: 219361 Number of extensions: 1419505 Number of successful extensions: 3360 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3257 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3359 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)