ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H... 143 4e-34
2CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H... 128 1e-29
3CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 ... 110 4e-24
4CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)... 83 5e-16
5CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)... 78 2e-14
6VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar C... 70 5e-12
7CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)... 60 4e-09
8YN61_YEAST (P42839) Protein YNL321W 35 0.11
9AT5G2_SHEEP (Q06056) ATP synthase lipid-binding protein, mitocho... 31 2.8
10AT5G2_BOVIN (P07926) ATP synthase lipid-binding protein, mitocho... 31 2.8
11HMDH_GIBFU (Q12577) 3-hydroxy-3-methylglutaryl-coenzyme A reduct... 30 6.1
12ACES_ANOST (P56161) Acetylcholinesterase precursor (EC 3.1.1.7) ... 29 8.0
13ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associate... 29 8.0

>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger|
           3) (OsCAX3)
          Length = 417

 Score =  143 bits (360), Expect = 4e-34
 Identities = 68/71 (95%), Positives = 71/71 (100%)
 Frame = +3

Query: 15  FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194
           FCVV+GWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLML+LCYLIVAASF
Sbjct: 347 FCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASF 406

Query: 195 FVHVDPQASDD 227
           FVHVDPQ+SDD
Sbjct: 407 FVHVDPQSSDD 417



to top

>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger|
           2) (OsCAX2)
          Length = 437

 Score =  128 bits (322), Expect = 1e-29
 Identities = 59/71 (83%), Positives = 68/71 (95%)
 Frame = +3

Query: 15  FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194
           FCVV+GW+MGQ+MDLNFQLFETATLFITVLVVAFMLQ+G +NY KGLML+LCYLIVAASF
Sbjct: 366 FCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASF 425

Query: 195 FVHVDPQASDD 227
           FVHVDP +S++
Sbjct: 426 FVHVDPDSSNN 436



to top

>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)|
           exchanger 4) (OsCAX4)
          Length = 447

 Score =  110 bits (274), Expect = 4e-24
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +3

Query: 15  FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194
           FCVV+GWMMG+ MDLNF LFETA+L  TVLVVAF+LQDG +N +KGLML LCYLIVAASF
Sbjct: 371 FCVVMGWMMGKPMDLNFHLFETASLLTTVLVVAFLLQDGTSNCVKGLMLFLCYLIVAASF 430

Query: 195 FVHVDPQA 218
           +VH DP +
Sbjct: 431 YVHADPNS 438



to top

>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger|
           1a) (OsCAX1a)
          Length = 451

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 36/64 (56%), Positives = 51/64 (79%)
 Frame = +3

Query: 21  VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200
           V+V W+MG +MDL+F+L ET +LF+ VLV AF LQDG ++YLKG++L+LCY+++ A FFV
Sbjct: 365 VLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFV 424

Query: 201 HVDP 212
              P
Sbjct: 425 ARQP 428



to top

>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger|
           1b) (OsCAX1b)
          Length = 453

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 34/60 (56%), Positives = 46/60 (76%)
 Frame = +3

Query: 21  VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200
           V+V W MG  MDL+F L ET +LF+ +LV AF LQ+G ++YLKGL+LVLCY +++  FFV
Sbjct: 375 VIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434



to top

>VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar Ca(2+)/H(+)|
           exchanger) (High copy number undoes manganese protein 1)
           (Manganese resistance 1 protein)
          Length = 411

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 31/70 (44%), Positives = 48/70 (68%)
 Frame = +3

Query: 15  FCVVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASF 194
           F V+VGWM+   M LNF  FETATLFI V +  +++ DG +N+L+G+M +  Y+++A +F
Sbjct: 336 FMVLVGWMIDVPMTLNFSTFETATLFIAVFLSNYLILDGESNWLEGVMSLAMYILIAMAF 395

Query: 195 FVHVDPQASD 224
           F + D +  D
Sbjct: 396 FYYPDEKTLD 405



to top

>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger|
           1c) (OsCAX1c)
          Length = 450

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +3

Query: 21  VVVGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFFV 200
           ++V W+    MDL+F L ET +L + V+  AF LQD   +YLKGL LV  Y+++A  FFV
Sbjct: 379 LIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFV 438



to top

>YN61_YEAST (P42839) Protein YNL321W|
          Length = 908

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 45   QKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLVLCYLIVAASFF 197
            Q   L F  ++      +V +  ++  +G +NY KG ML+L Y+I+   F+
Sbjct: 851  QMFPLVFPRWDIFGAMTSVFMFTYLYAEGKSNYFKGSMLILLYIIIVVGFY 901



to top

>AT5G2_SHEEP (Q06056) ATP synthase lipid-binding protein, mitochondrial|
           precursor (EC 3.6.3.14) (ATP synthase proteolipid P2)
           (ATPase protein 9) (ATPase subunit C)
          Length = 143

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 444 ENLTD*SHSSLAMKGPPRNELLSPCRRFSQDAAS 343
           E LTD SHSSLA+   P    L+P R F   A S
Sbjct: 34  ETLTDESHSSLAVVPRPLTTSLTPSRSFQTSAIS 67



to top

>AT5G2_BOVIN (P07926) ATP synthase lipid-binding protein, mitochondrial|
           precursor (EC 3.6.3.14) (ATP synthase proteolipid P2)
           (ATPase protein 9) (ATPase subunit C)
          Length = 143

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 444 ENLTD*SHSSLAMKGPPRNELLSPCRRFSQDAAS 343
           E LTD SHSSLA+   P    L+P R F   A S
Sbjct: 34  ETLTDESHSSLAVVPRPLTTSLTPSRSFQTSAIS 67



to top

>HMDH_GIBFU (Q12577) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC|
           1.1.1.34) (HMG-CoA reductase)
          Length = 976

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 343 GQAGLY*RGSGGLPE*D*RVIGGIWYSNY-SVCCWSWRQSSSLACGSTWTKKLAATIR*H 167
           G A L+ R S  +P+    +I G  + N  ++C   +R  SS++   TW   L   I   
Sbjct: 258 GDAPLFGRKSSSIPKFKVLMILGFIFVNIVNICSIPFRNPSSMSTIRTWASSLGGVIA-- 315

Query: 166 RTSISPFK 143
             S+ PFK
Sbjct: 316 PLSVDPFK 323



to top

>ACES_ANOST (P56161) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 664

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 395 RAMSCCRRAVVSVRMLLRTGRALLEGERW 309
           R     RR V+SV    RTG   LEGE W
Sbjct: 525 RERDLSRRMVLSVSEFARTGNPALEGEHW 553



to top

>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3371

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 452  IRKKI*QINPTAVWL*RDHRAMSCCRRAVVSVRMLLRTGRALLEGERWLTG 300
            +R++   +  TAVW+ R +RA  C R  V      LR  +A ++ + W  G
Sbjct: 2194 MRRRFLSLRKTAVWVQRKYRAKVCTRHHV----QQLRLQKAAIKIQSWYRG 2240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,717,948
Number of Sequences: 219361
Number of extensions: 1419505
Number of successful extensions: 3360
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3359
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top