Clone Name | baak4g15 |
---|---|
Clone Library Name | barley_pub |
>S35C2_MOUSE (Q8VCX2) Solute carrier family 35 member C2 (Ovarian cancer| overexpressed gene 1 protein) Length = 364 Score = 60.5 bits (145), Expect = 2e-09 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Frame = +3 Query: 18 SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197 +P A+ + SN +++Y++VS M K+ + + ++FK E R++ +L +L I Sbjct: 88 APTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLI 147 Query: 198 SFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAP 371 + G+ + Y +F++ G AL L A R L QILL + L NPI +++++ P Sbjct: 148 AGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQILLQKADLGLQNPIDTMFHLQP 206
>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I| Length = 374 Score = 59.7 bits (143), Expect = 4e-09 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 7/141 (4%) Frame = +3 Query: 42 MSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAA 221 + + SN++ +++SF M ++ + + V+ V+F+ E F + L IS GV + Sbjct: 136 LDIGLSNASLETITLSFYTMCRSSILIFVFFFSVIFRIEMFDWILLCITLVISAGVVLMV 195 Query: 222 YGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLV-- 395 E +F L G L +A+ R L Q LL + NP TSL+ + P FLLV Sbjct: 196 ATETQFVLSGFLLVMASSVLSGLRWALTQKLLLDHPWTSNPFTSLFALTPLMFLFLLVAG 255 Query: 396 -----PWIFVELPRLRAVGTF 443 P F+E P + G F Sbjct: 256 LIFEGPVRFIESPAWKEFGPF 276
>S35C2_HUMAN (Q9NQQ7) Solute carrier family 35 member C2 (Ovarian cancer| overexpressed gene 1 protein) Length = 365 Score = 58.5 bits (140), Expect = 9e-09 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Frame = +3 Query: 18 SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197 +P A+ + SN +++Y++VS M K+ + + ++FK E R++ +L +L I Sbjct: 88 APTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLI 147 Query: 198 SFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAP 371 + G+ + Y +F++ G AL L A R L Q+LL + L NPI +++++ P Sbjct: 148 AGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQP 206
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 43.9 bits (102), Expect = 2e-04 Identities = 34/129 (26%), Positives = 61/129 (47%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P ++ + F+N + +SVSF +KA+ P + +F E + +++ I Sbjct: 169 PLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIV 228 Query: 201 FGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380 GVA+A+ E F+ G +A+ +R VL + ++ K SL+ IT L+ + Sbjct: 229 GGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNIT-LFSIITLMS 287 Query: 381 CFLLVPWIF 407 FL+ P F Sbjct: 288 LFLMAPVTF 296
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 40.4 bits (93), Expect = 0.003 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Frame = +3 Query: 78 LSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRG-V 254 ++VSF ++K+ P + F ETF L++L I G A+AA E F++ G + Sbjct: 183 VAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFM 242 Query: 255 ALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCF----LLVPW-IFVELP 419 ++ +AF + + + + KG+ ++ + Y A CL +L P+ I VE+P Sbjct: 243 GAMISNLAF------VFRNIFSKKGMKGKSVSGMNYYA--CLSMMSLVILTPFSIAVEVP 294 Query: 420 RLRAVG 437 ++ A G Sbjct: 295 QMWAAG 300
>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 39.3 bits (90), Expect = 0.006 Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 2/137 (1%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P G +A+ SN ++ ++VSF +KAL P + ++ S L++ + Sbjct: 172 PVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVV 231 Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374 GV++A+ E F+ G ++ ++ ++F + + + K ++ T+LY Y++ Sbjct: 232 IGVSMASLTELSFNWLGFISAMISNISF------TYRSIYSKKAMTDMDSTNLYAYISII 285 Query: 375 CLCFLLVPWIFVELPRL 425 L F + P + E P+L Sbjct: 286 ALLFCIPPAVLFEGPQL 302
>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 37.4 bits (85), Expect = 0.022 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P +A+ SN ++ ++VSF +KAL P S + + L++ + Sbjct: 172 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVV 231 Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374 GVA+A+ E F+ G ++ ++ ++F + + + K ++ T++Y Y++ Sbjct: 232 LGVAMASLTELSFNWLGFISAMISNISF------TYRSIFSKKAMTDMDSTNVYAYISII 285 Query: 375 CLCFLLVPWIFVELPRL 425 L L P I VE P+L Sbjct: 286 ALFVCLPPAIIVEGPQL 302
>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (E29) Length = 414 Score = 37.4 bits (85), Expect = 0.022 Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 2/138 (1%) Frame = +3 Query: 18 SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197 +P +A+ SN ++ + VSF +KAL P + + + L++ + Sbjct: 178 TPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPV 237 Query: 198 SFGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAP 371 GV++A+ E F+ G + ++ ++F + + + K ++ T++Y Y++ Sbjct: 238 VLGVSMASLTELSFNWLGFTSAMISNISFT------YRSIYSKKAMTDMDSTNVYAYISI 291 Query: 372 CCLCFLLVPWIFVELPRL 425 L F L P IF+E P+L Sbjct: 292 IALIFCLPPAIFIEGPQL 309
>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E29) Length = 404 Score = 37.0 bits (84), Expect = 0.029 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 2/141 (1%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P +A+ SN ++ ++VSF +KAL P + ++ + L++ + Sbjct: 169 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVV 228 Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374 GV++A+ E F+ G ++ ++ V+F + L + K ++ T++Y Y++ Sbjct: 229 IGVSMASLTELSFNWLGFISAMISNVSF------TYRSLYSKKAMTDMDSTNIYAYISII 282 Query: 375 CLCFLLVPWIFVELPRLRAVG 437 L L P I VE P+L G Sbjct: 283 ALFVCLPPAIIVEGPQLMKHG 303
>SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1| Length = 266 Score = 36.2 bits (82), Expect = 0.049 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = +3 Query: 114 MPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAA-VAFEAT 290 MP+ V + + KE + L+++ I GV +A E FD+ G+ LAA + F Sbjct: 1 MPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQ 60 Query: 291 RLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLVP-WIFVEL 416 + ++L S+ L L + C F ++P W+ V+L Sbjct: 61 NIFSKKVLRDSRIHHLR----LLNILGCHAVFFMIPTWVLVDL 99
>SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1| Length = 265 Score = 35.4 bits (80), Expect = 0.084 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = +3 Query: 114 MPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAA-VAFEAT 290 MP+ V + + KE + L+++ I GV +A E FD+ G+ LAA + F Sbjct: 1 MPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQ 60 Query: 291 RLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLVP-WIFVEL 416 + ++L S+ L L + C F ++P W+ V+L Sbjct: 61 NIFSKKVLRDSRIHHLR----LLNILGCHAVFFMIPTWVLVDL 99
>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast| precursor Length = 388 Score = 35.0 bits (79), Expect = 0.11 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 12/138 (8%) Frame = +3 Query: 78 LSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRG-V 254 ++VSF ++K+ P + ETF +S L+++ I G A++A E F++ G + Sbjct: 183 VAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFM 242 Query: 255 ALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCFL----LVPW-IFVELP 419 ++ +AF + + + + KG+ ++ + Y A CL L L P+ I VE P Sbjct: 243 GAMISNLAF------VFRNIFSKKGMKGKSVSGMNYYA--CLSMLSLLILTPFAIAVEGP 294 Query: 420 RL------RAVGTFQPDF 455 ++ A+ T P F Sbjct: 295 QMWVDGWQTALATVGPQF 312
>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E30) Length = 402 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/141 (20%), Positives = 65/141 (46%), Gaps = 2/141 (1%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P +A+ SN ++ ++VSF +KAL P + ++ + L++ + Sbjct: 167 PVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226 Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374 GV++A+ E F+ G ++ ++ ++F + + + K ++ T++Y Y++ Sbjct: 227 IGVSMASLTELSFNWLGFISAMISNISF------TYRSIYSKKAMTDMDSTNIYAYISII 280 Query: 375 CLCFLLVPWIFVELPRLRAVG 437 L + P + +E P L G Sbjct: 281 ALIVCIPPALIIEGPTLLKTG 301
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 34.3 bits (77), Expect = 0.19 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = -2 Query: 95 DEGDGE-VDVCRVGEPEGHGVERAXWG 18 D G G+ D+C+V P+GHG RA WG Sbjct: 684 DNGPGQWSDICKVVTPDGHGKNRAKWG 710
>YMD8_YEAST (Q03697) Hypothetical 49.6 kDa protein in CAT2-AMD1 intergenic| region Length = 442 Score = 33.9 bits (76), Expect = 0.24 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = +3 Query: 21 PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200 P A + SN ++ Y+ ++ ++K+ V G +FK E F L+++ + Sbjct: 86 PTAVASAGDIGLSNVSFQYVPLTIYTIIKSSSIAFVLLFGCIFKLEKFHWKLALSVIIMF 145 Query: 201 FGVAIAAY---------GEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLN 341 GVA+ + + + G L LA+ R V Q++L + I N Sbjct: 146 VGVALMVFKPSDSTSTKNDQALVIFGSFLVLASSCLSGLRWVYTQLMLRNNPIQTN 201
>ADAM2_RAT (Q63202) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta) Length = 737 Score = 32.0 bits (71), Expect = 0.92 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 249 GVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380 GVAL AV E+ ++L+Q+L S G++ + + + P C+ Sbjct: 300 GVALHPKAVTLESLAIILVQLLSLSMGVAYDDVNTCQCGVPICV 343
>S35D1_HUMAN (Q9NTN3) UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter| (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7) Length = 355 Score = 31.6 bits (70), Expect = 1.2 Identities = 27/95 (28%), Positives = 43/95 (45%) Frame = +3 Query: 126 VYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLI 305 +++ GVL KK TF + + ++ G +AA + FDL G A L A + Sbjct: 147 MFAEGVLLKK-TFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYV 205 Query: 306 QILLTSKGISLNPITSLYYVAPCCLCFLLVPWIFV 410 + L SK L LYY A F+++P + + Sbjct: 206 KQKLDSK--ELGKYGLLYYNA----LFMILPTLAI 234
>CCMF_BRAJA (P45403) Cytochrome c-type biogenesis protein cycK| Length = 660 Score = 31.6 bits (70), Expect = 1.2 Identities = 30/112 (26%), Positives = 47/112 (41%) Frame = +3 Query: 12 PSSPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNML 191 P S GAL +L + + + L + + ++ S+G F TF L +L Sbjct: 344 PISREGALVLNNLLLTVACAVVLFGTLYPLAMEMLADFKMSVGAPFYNLTFAPLFALLLL 403 Query: 192 SISFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPI 347 ++ FG +A R DL GV +L A +V I T G +L P+ Sbjct: 404 AVPFGPMLA---WKRGDLLGVTQRLLAAGVAGLVVVAIVWAWTRGGSALAPL 452
>ADAM2_MOUSE (Q60718) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta) Length = 735 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 249 GVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380 GVAL AV E+ ++L+Q+L S G++ + + P C+ Sbjct: 300 GVALHPKAVTLESLAIILVQLLSLSMGLAYDDVNKCQCGVPVCV 343
>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42| Length = 723 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -2 Query: 95 DEGDGE-VDVCRVGEPEGHGVERAXWG 18 D G G+ D+C+V P+G G RA WG Sbjct: 684 DNGPGQWSDICKVVTPDGRGKNRAKWG 710
>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 409 Score = 30.4 bits (67), Expect = 2.7 Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Frame = +3 Query: 57 SNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEAR 236 SN ++ ++VSF +KAL P + + S L++ + GV++A+ E Sbjct: 187 SNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELS 246 Query: 237 FDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPCCLCFLLVPWIFV 410 F+ G + ++ ++F + + + K ++ T++Y Y++ L + P + Sbjct: 247 FNWTGFINAMISNISF------TYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIF 300 Query: 411 ELPRLRAVG 437 E P+L G Sbjct: 301 EGPKLMQHG 309
>RFC_SHIDY (Q03584) O-antigen polymerase| Length = 380 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/61 (24%), Positives = 34/61 (55%) Frame = +3 Query: 33 LYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVA 212 L A +L+F + + S+++I + ++ V + G + K + + M+N++SI FG+ Sbjct: 53 LSATTLFFILAFLFFFSMTYILIARSGRVVFSFGTGFIESKYIYWFAGMINIISICFGII 112 Query: 213 I 215 + Sbjct: 113 L 113
>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 320 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +3 Query: 36 YAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAI 215 Y ++ SNSA +++ + K+ P+ V +GV ++ + + L +L I FGVA+ Sbjct: 92 YLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLRKKYPLTKYLCVLLIVFGVAL 151 Query: 216 AAY 224 Y Sbjct: 152 FMY 154
>S35B1_RAT (Q6V7K3) Solute carrier family 35 member B1 (UDP-galactose| transporter-related protein 1) (UGTrel1) Length = 322 Score = 29.3 bits (64), Expect = 6.0 Identities = 27/108 (25%), Positives = 49/108 (45%) Frame = +3 Query: 36 YAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAI 215 Y ++ SNSA +++ + K+ P+ V +GV K+ + + L +L I GVA+ Sbjct: 94 YVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVAL 153 Query: 216 AAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY 359 Y + V ++ V F L+L L G+S + + + Y Sbjct: 154 FMYKPKKV----VGIEEHTVGFGELLLLLSLTLDGLTGVSQDHMRAHY 197
>VHL_CANFA (Q5Q9Z2) Von Hippel-Lindau disease tumor suppressor (pVHL)| Length = 219 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -2 Query: 494 ESKGAERVSPEDEEVGLEGADGAEPGQLD-EDPGHEQEAEA 375 E GAE V PE+ GA+ + P + D E+PG E EA Sbjct: 16 EEVGAEEVGPEESGGEESGAEESGPEESDPEEPGAAAEMEA 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,198,669 Number of Sequences: 219361 Number of extensions: 518143 Number of successful extensions: 2257 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2253 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)