ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4g15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S35C2_MOUSE (Q8VCX2) Solute carrier family 35 member C2 (Ovarian... 60 2e-09
2YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I 60 4e-09
3S35C2_HUMAN (Q9NQQ7) Solute carrier family 35 member C2 (Ovarian... 59 9e-09
4TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... 44 2e-04
5GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 40 0.003
6TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chlo... 39 0.006
7TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 37 0.022
8TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 37 0.022
9TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo... 37 0.029
10SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1 36 0.049
11SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1 35 0.084
12GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 35 0.11
13TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloro... 35 0.14
14TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42 34 0.19
15YMD8_YEAST (Q03697) Hypothetical 49.6 kDa protein in CAT2-AMD1 i... 34 0.24
16ADAM2_RAT (Q63202) ADAM 2 precursor (A disintegrin and metallopr... 32 0.92
17S35D1_HUMAN (Q9NTN3) UDP-glucuronic acid/UDP-N-acetylgalactosami... 32 1.2
18CCMF_BRAJA (P45403) Cytochrome c-type biogenesis protein cycK 32 1.2
19ADAM2_MOUSE (Q60718) ADAM 2 precursor (A disintegrin and metallo... 31 1.6
20TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42 31 1.6
21TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chlo... 30 2.7
22RFC_SHIDY (Q03584) O-antigen polymerase 30 3.5
23S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endopla... 30 4.6
24S35B1_RAT (Q6V7K3) Solute carrier family 35 member B1 (UDP-galac... 29 6.0
25VHL_CANFA (Q5Q9Z2) Von Hippel-Lindau disease tumor suppressor (p... 29 7.8

>S35C2_MOUSE (Q8VCX2) Solute carrier family 35 member C2 (Ovarian cancer|
           overexpressed gene 1 protein)
          Length = 364

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = +3

Query: 18  SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197
           +P     A+ +  SN +++Y++VS   M K+   + +    ++FK E  R++ +L +L I
Sbjct: 88  APTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLI 147

Query: 198 SFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAP 371
           + G+ +  Y   +F++ G AL L A      R  L QILL    + L NPI +++++ P
Sbjct: 148 AGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQILLQKADLGLQNPIDTMFHLQP 206



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>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I|
          Length = 374

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
 Frame = +3

Query: 42  MSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAA 221
           + +  SN++   +++SF  M ++ + + V+   V+F+ E F    +   L IS GV +  
Sbjct: 136 LDIGLSNASLETITLSFYTMCRSSILIFVFFFSVIFRIEMFDWILLCITLVISAGVVLMV 195

Query: 222 YGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLV-- 395
             E +F L G  L +A+      R  L Q LL     + NP TSL+ + P    FLLV  
Sbjct: 196 ATETQFVLSGFLLVMASSVLSGLRWALTQKLLLDHPWTSNPFTSLFALTPLMFLFLLVAG 255

Query: 396 -----PWIFVELPRLRAVGTF 443
                P  F+E P  +  G F
Sbjct: 256 LIFEGPVRFIESPAWKEFGPF 276



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>S35C2_HUMAN (Q9NQQ7) Solute carrier family 35 member C2 (Ovarian cancer|
           overexpressed gene 1 protein)
          Length = 365

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = +3

Query: 18  SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197
           +P     A+ +  SN +++Y++VS   M K+   + +    ++FK E  R++ +L +L I
Sbjct: 88  APTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLI 147

Query: 198 SFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISL-NPITSLYYVAP 371
           + G+ +  Y   +F++ G AL L A      R  L Q+LL    + L NPI +++++ P
Sbjct: 148 AGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQP 206



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>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green|
           plastid, chloroplast precursor (CTPT)
          Length = 402

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 34/129 (26%), Positives = 61/129 (47%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P   ++ +   F+N +   +SVSF   +KA+ P     +  +F  E      + +++ I 
Sbjct: 169 PLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIV 228

Query: 201 FGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380
            GVA+A+  E  F+  G    +A+     +R VL + ++  K  SL+ IT L+ +     
Sbjct: 229 GGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNIT-LFSIITLMS 287

Query: 381 CFLLVPWIF 407
            FL+ P  F
Sbjct: 288 LFLMAPVTF 296



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>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
 Frame = +3

Query: 78  LSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRG-V 254
           ++VSF  ++K+  P     +   F  ETF     L++L I  G A+AA  E  F++ G +
Sbjct: 183 VAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFM 242

Query: 255 ALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCF----LLVPW-IFVELP 419
              ++ +AF      + + + + KG+    ++ + Y A  CL      +L P+ I VE+P
Sbjct: 243 GAMISNLAF------VFRNIFSKKGMKGKSVSGMNYYA--CLSMMSLVILTPFSIAVEVP 294

Query: 420 RLRAVG 437
           ++ A G
Sbjct: 295 QMWAAG 300



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>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P G  +A+    SN ++  ++VSF   +KAL P    +       ++   S  L++  + 
Sbjct: 172 PVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVV 231

Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374
            GV++A+  E  F+  G ++  ++ ++F        + + + K ++    T+LY Y++  
Sbjct: 232 IGVSMASLTELSFNWLGFISAMISNISF------TYRSIYSKKAMTDMDSTNLYAYISII 285

Query: 375 CLCFLLVPWIFVELPRL 425
            L F + P +  E P+L
Sbjct: 286 ALLFCIPPAVLFEGPQL 302



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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P    +A+    SN ++  ++VSF   +KAL P    S       +    +  L++  + 
Sbjct: 172 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVV 231

Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374
            GVA+A+  E  F+  G ++  ++ ++F        + + + K ++    T++Y Y++  
Sbjct: 232 LGVAMASLTELSFNWLGFISAMISNISF------TYRSIFSKKAMTDMDSTNVYAYISII 285

Query: 375 CLCFLLVPWIFVELPRL 425
            L   L P I VE P+L
Sbjct: 286 ALFVCLPPAIIVEGPQL 302



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
 Frame = +3

Query: 18  SPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSI 197
           +P    +A+    SN ++  + VSF   +KAL P    +       +    +  L++  +
Sbjct: 178 TPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPV 237

Query: 198 SFGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAP 371
             GV++A+  E  F+  G  +  ++ ++F        + + + K ++    T++Y Y++ 
Sbjct: 238 VLGVSMASLTELSFNWLGFTSAMISNISFT------YRSIYSKKAMTDMDSTNVYAYISI 291

Query: 372 CCLCFLLVPWIFVELPRL 425
             L F L P IF+E P+L
Sbjct: 292 IALIFCLPPAIFIEGPQL 309



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>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P    +A+    SN ++  ++VSF   +KAL P    +       ++   +  L++  + 
Sbjct: 169 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVV 228

Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374
            GV++A+  E  F+  G ++  ++ V+F        + L + K ++    T++Y Y++  
Sbjct: 229 IGVSMASLTELSFNWLGFISAMISNVSF------TYRSLYSKKAMTDMDSTNIYAYISII 282

Query: 375 CLCFLLVPWIFVELPRLRAVG 437
            L   L P I VE P+L   G
Sbjct: 283 ALFVCLPPAIIVEGPQLMKHG 303



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>SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1|
          Length = 266

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +3

Query: 114 MPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAA-VAFEAT 290
           MP+ V  +  +  KE   +   L+++ I  GV +A   E  FD+ G+   LAA + F   
Sbjct: 1   MPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQ 60

Query: 291 RLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLVP-WIFVEL 416
            +   ++L  S+   L     L  +  C   F ++P W+ V+L
Sbjct: 61  NIFSKKVLRDSRIHHLR----LLNILGCHAVFFMIPTWVLVDL 99



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>SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1|
          Length = 265

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +3

Query: 114 MPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAA-VAFEAT 290
           MP+ V  +  +  KE   +   L+++ I  GV +A   E  FD+ G+   LAA + F   
Sbjct: 1   MPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQ 60

Query: 291 RLVLIQILLTSKGISLNPITSLYYVAPCCLCFLLVP-WIFVEL 416
            +   ++L  S+   L     L  +  C   F ++P W+ V+L
Sbjct: 61  NIFSKKVLRDSRIHHLR----LLNILGCHAVFFMIPTWVLVDL 99



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>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
 Frame = +3

Query: 78  LSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRG-V 254
           ++VSF  ++K+  P     +      ETF +S  L+++ I  G A++A  E  F++ G +
Sbjct: 183 VAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFM 242

Query: 255 ALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLCFL----LVPW-IFVELP 419
              ++ +AF      + + + + KG+    ++ + Y A  CL  L    L P+ I VE P
Sbjct: 243 GAMISNLAF------VFRNIFSKKGMKGKSVSGMNYYA--CLSMLSLLILTPFAIAVEGP 294

Query: 420 RL------RAVGTFQPDF 455
           ++       A+ T  P F
Sbjct: 295 QMWVDGWQTALATVGPQF 312



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>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E30)
          Length = 402

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 29/141 (20%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P    +A+    SN ++  ++VSF   +KAL P    +       ++   +  L++  + 
Sbjct: 167 PVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226

Query: 201 FGVAIAAYGEARFDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPC 374
            GV++A+  E  F+  G ++  ++ ++F        + + + K ++    T++Y Y++  
Sbjct: 227 IGVSMASLTELSFNWLGFISAMISNISF------TYRSIYSKKAMTDMDSTNIYAYISII 280

Query: 375 CLCFLLVPWIFVELPRLRAVG 437
            L   + P + +E P L   G
Sbjct: 281 ALIVCIPPALIIEGPTLLKTG 301



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>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 95  DEGDGE-VDVCRVGEPEGHGVERAXWG 18
           D G G+  D+C+V  P+GHG  RA WG
Sbjct: 684 DNGPGQWSDICKVVTPDGHGKNRAKWG 710



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>YMD8_YEAST (Q03697) Hypothetical 49.6 kDa protein in CAT2-AMD1 intergenic|
           region
          Length = 442

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = +3

Query: 21  PXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSIS 200
           P     A  +  SN ++ Y+ ++   ++K+     V   G +FK E F     L+++ + 
Sbjct: 86  PTAVASAGDIGLSNVSFQYVPLTIYTIIKSSSIAFVLLFGCIFKLEKFHWKLALSVIIMF 145

Query: 201 FGVAIAAY---------GEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLN 341
            GVA+  +          +    + G  L LA+      R V  Q++L +  I  N
Sbjct: 146 VGVALMVFKPSDSTSTKNDQALVIFGSFLVLASSCLSGLRWVYTQLMLRNNPIQTN 201



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>ADAM2_RAT (Q63202) ADAM 2 precursor (A disintegrin and metalloproteinase|
           domain 2) (Fertilin beta subunit) (PH-30) (PH30)
           (PH30-beta)
          Length = 737

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 249 GVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380
           GVAL   AV  E+  ++L+Q+L  S G++ + + +     P C+
Sbjct: 300 GVALHPKAVTLESLAIILVQLLSLSMGVAYDDVNTCQCGVPICV 343



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>S35D1_HUMAN (Q9NTN3) UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter|
           (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family
           35 member D1) (UDP-galactose transporter-related protein
           7) (UGTrel7)
          Length = 355

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 27/95 (28%), Positives = 43/95 (45%)
 Frame = +3

Query: 126 VYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLI 305
           +++ GVL KK TF     + + ++  G  +AA  +  FDL G A  L      A     +
Sbjct: 147 MFAEGVLLKK-TFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYV 205

Query: 306 QILLTSKGISLNPITSLYYVAPCCLCFLLVPWIFV 410
           +  L SK   L     LYY A     F+++P + +
Sbjct: 206 KQKLDSK--ELGKYGLLYYNA----LFMILPTLAI 234



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>CCMF_BRAJA (P45403) Cytochrome c-type biogenesis protein cycK|
          Length = 660

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 30/112 (26%), Positives = 47/112 (41%)
 Frame = +3

Query: 12  PSSPXGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNML 191
           P S  GAL   +L  + +  + L  +   +   ++     S+G  F   TF     L +L
Sbjct: 344 PISREGALVLNNLLLTVACAVVLFGTLYPLAMEMLADFKMSVGAPFYNLTFAPLFALLLL 403

Query: 192 SISFGVAIAAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPI 347
           ++ FG  +A     R DL GV  +L A       +V I    T  G +L P+
Sbjct: 404 AVPFGPMLA---WKRGDLLGVTQRLLAAGVAGLVVVAIVWAWTRGGSALAPL 452



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>ADAM2_MOUSE (Q60718) ADAM 2 precursor (A disintegrin and metalloproteinase|
           domain 2) (Fertilin beta subunit) (PH-30) (PH30)
           (PH30-beta)
          Length = 735

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 249 GVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCL 380
           GVAL   AV  E+  ++L+Q+L  S G++ + +       P C+
Sbjct: 300 GVALHPKAVTLESLAIILVQLLSLSMGLAYDDVNKCQCGVPVCV 343



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>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42|
          Length = 723

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 95  DEGDGE-VDVCRVGEPEGHGVERAXWG 18
           D G G+  D+C+V  P+G G  RA WG
Sbjct: 684 DNGPGQWSDICKVVTPDGRGKNRAKWG 710



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>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 409

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
 Frame = +3

Query: 57  SNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAIAAYGEAR 236
           SN ++  ++VSF   +KAL P    +       +    S  L++  +  GV++A+  E  
Sbjct: 187 SNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELS 246

Query: 237 FDLRG-VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY-YVAPCCLCFLLVPWIFV 410
           F+  G +   ++ ++F        + + + K ++    T++Y Y++   L   + P +  
Sbjct: 247 FNWTGFINAMISNISF------TYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIF 300

Query: 411 ELPRLRAVG 437
           E P+L   G
Sbjct: 301 EGPKLMQHG 309



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>RFC_SHIDY (Q03584) O-antigen polymerase|
          Length = 380

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/61 (24%), Positives = 34/61 (55%)
 Frame = +3

Query: 33  LYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVA 212
           L A +L+F  +   + S+++I + ++   V  +  G +  K  +  + M+N++SI FG+ 
Sbjct: 53  LSATTLFFILAFLFFFSMTYILIARSGRVVFSFGTGFIESKYIYWFAGMINIISICFGII 112

Query: 213 I 215
           +
Sbjct: 113 L 113



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>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum|
           nucleotide sugar transporter 1)
          Length = 320

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +3

Query: 36  YAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAI 215
           Y  ++  SNSA  +++     + K+  P+ V  +GV   ++ +  +  L +L I FGVA+
Sbjct: 92  YLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLRKKYPLTKYLCVLLIVFGVAL 151

Query: 216 AAY 224
             Y
Sbjct: 152 FMY 154



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>S35B1_RAT (Q6V7K3) Solute carrier family 35 member B1 (UDP-galactose|
           transporter-related protein 1) (UGTrel1)
          Length = 322

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 27/108 (25%), Positives = 49/108 (45%)
 Frame = +3

Query: 36  YAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLNMLSISFGVAI 215
           Y  ++  SNSA  +++     + K+  P+ V  +GV   K+ +  +  L +L I  GVA+
Sbjct: 94  YVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVAL 153

Query: 216 AAYGEARFDLRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLY 359
             Y   +     V ++   V F    L+L   L    G+S + + + Y
Sbjct: 154 FMYKPKKV----VGIEEHTVGFGELLLLLSLTLDGLTGVSQDHMRAHY 197



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>VHL_CANFA (Q5Q9Z2) Von Hippel-Lindau disease tumor suppressor (pVHL)|
          Length = 219

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 494 ESKGAERVSPEDEEVGLEGADGAEPGQLD-EDPGHEQEAEA 375
           E  GAE V PE+      GA+ + P + D E+PG   E EA
Sbjct: 16  EEVGAEEVGPEESGGEESGAEESGPEESDPEEPGAAAEMEA 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,198,669
Number of Sequences: 219361
Number of extensions: 518143
Number of successful extensions: 2257
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2253
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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