Clone Name | baak4f23 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009086.1| Triticum aestivum clone wkm1c.pk005.m4:fis, full insert mRNA sequence Length = 1052 Score = 852 bits (430), Expect = 0.0 Identities = 499/521 (95%), Gaps = 1/521 (0%) Strand = Plus / Plus Query: 13 cagcaagtcctcagctaagnaggacttcggaacattttgcggctttacattaaaagggcc 72 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 154 cagcaagtcctcagctaagg-ggacttcggaacattttgcggctttacattaaaagggca 212 Query: 73 aattgttctgaatgggagcaaattcaaatgccttcaagtgttagatccctggtggtctta 132 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 213 aattgttctgaatgggagcaaattcaaatgccttcaagtgttagatcactagtggtctta 272 Query: 133 aatctggacaactacgccagtggaaagcatccatggggtgatcttaaaccggattatctt 192 |||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 273 aatctgtacaactacggcagtggaaggcatccatggggtgatcttaaaccagattatctt 332 Query: 193 gaaaagagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctg 252 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 333 gaaaagaaaggttttgttgaagctcattcagatgacggtttgattgaaatatttggtctg 392 Query: 253 aaagaaggctggcatgcttccttcgttatggctgagcttatcaaagcaaagcacatcgct 312 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 393 aaagaaggttggcatgcttcattcgttatggctgagcttatcaaagcaaagcacattgct 452 Query: 313 caggctgcagctatcaagttcgaaatgaggggaggcgagtgggatcgagcatatgttcaa 372 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 453 caggctgcagctatcaagtttgaaatgaggggaggcgagtgggatcgagcatatgttcaa 512 Query: 373 atggacggcgagccatggaagcaaccactcatccaggatcagtcgacaattgtggaaata 432 ||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||| Sbjct: 513 atggatggcgagccatggaaacaaccactcatccaggaccagtcgacaattctggaaata 572 Query: 433 aacaaggttccctatcactcccggatgataaacggggattcatgagatttccctatgtca 492 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 573 aacaaggttccctatcactcccggatgataaacggggattcatgagatctccctatgtca 632 Query: 493 atcagggttacactctagatcgatagtctatgtacagttta 533 |||||||||||||||||||||| ||| |||||||||||||| Sbjct: 633 atcagggttacactctagatcggtaggctatgtacagttta 673
>ref|XM_468178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1801 Score = 416 bits (210), Expect = e-113 Identities = 354/402 (88%) Strand = Plus / Plus Query: 42 gaacattttgcggctttacattaaaagggccaattgttctgaatgggagcaaattcaaat 101 |||||||||||| ||||||||||||| | |||||||||||||||||||||| || ||| Sbjct: 1097 gaacattttgcgactttacattaaaaaagtcaattgttctgaatgggagcaagttacaat 1156 Query: 102 gccttcaagtgttagatccctggtggtcttaaatctggacaactacgccagtggaaagca 161 |||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||| Sbjct: 1157 gccttcaagtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggca 1216 Query: 162 tccatggggtgatcttaaaccggattatcttgaaaagagaggttttgttgaagctcattc 221 ||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||| Sbjct: 1217 tccatggggtgatcttaaacctgattaccttgaaaagaaaggttttgtcgaagctcattc 1276 Query: 222 agacgacggtttgattgaaatatttggtctgaaagaaggctggcatgcttccttcgttat 281 || || || ||| |||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 1277 cgatgatggattgcttgaaatattcggtctgaaagaaggttggcatgcttcattcgttat 1336 Query: 282 ggctgagcttatcaaagcaaagcacatcgctcaggctgcagctatcaagttcgaaatgag 341 ||||||||| || |||||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1337 ggctgagctaattaaagcaaagcacattgctcaggctgcagccatcaagtttgaaatgag 1396 Query: 342 gggaggcgagtgggatcgagcatatgttcaaatggacggcgagccatggaagcaaccact 401 ||| ||| | ||| |||| || |||||||| ||||| || ||||||||||| |||||||| Sbjct: 1397 gggtggccaatggaatcgtgcgtatgttcagatggatggagagccatggaaacaaccact 1456 Query: 402 catccaggatcagtcgacaattgtggaaataaacaaggttcc 443 | | ||||| ||||| || ||| | || |||||||| ||||| Sbjct: 1457 cctacaggagcagtcaaccattatcgagataaacaaagttcc 1498
>dbj|AK065676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I11, full insert sequence Length = 1802 Score = 402 bits (203), Expect = e-109 Identities = 354/403 (87%), Gaps = 1/403 (0%) Strand = Plus / Plus Query: 42 gaacattttgcggctttacattaaaagg-gccaattgttctgaatgggagcaaattcaaa 100 |||||||||||| ||||||||||||| | |||||||||||||||||||||| || || Sbjct: 1097 gaacattttgcgactttacattaaaaaaagtcaattgttctgaatgggagcaagttacaa 1156 Query: 101 tgccttcaagtgttagatccctggtggtcttaaatctggacaactacgccagtggaaagc 160 ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| || Sbjct: 1157 tgccttcaagtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggc 1216 Query: 161 atccatggggtgatcttaaaccggattatcttgaaaagagaggttttgttgaagctcatt 220 |||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| Sbjct: 1217 atccatggggtgatcttaaacctgattaccttgaaaagaaaggttttgtcgaagctcatt 1276 Query: 221 cagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgcttccttcgtta 280 | || || || ||| |||||||||| |||||||||||||| ||||||||||| ||||||| Sbjct: 1277 ccgatgatggattgcttgaaatattcggtctgaaagaaggttggcatgcttcattcgtta 1336 Query: 281 tggctgagcttatcaaagcaaagcacatcgctcaggctgcagctatcaagttcgaaatga 340 |||||||||| || |||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1337 tggctgagctaattaaagcaaagcacattgctcaggctgcagccatcaagtttgaaatga 1396 Query: 341 ggggaggcgagtgggatcgagcatatgttcaaatggacggcgagccatggaagcaaccac 400 |||| ||| | ||| |||| || |||||||| ||||| || ||||||||||| ||||||| Sbjct: 1397 ggggtggccaatggaatcgtgcgtatgttcagatggatggagagccatggaaacaaccac 1456 Query: 401 tcatccaggatcagtcgacaattgtggaaataaacaaggttcc 443 || | ||||| ||||| || ||| | || |||||||| ||||| Sbjct: 1457 tcctacaggagcagtcaaccattatcgagataaacaaagttcc 1499
>gb|AY108203.1| Zea mays PCO088982 mRNA sequence Length = 1447 Score = 303 bits (153), Expect = 3e-79 Identities = 369/441 (83%) Strand = Plus / Plus Query: 42 gaacattttgcggctttacattaaaagggccaattgttctgaatgggagcaaattcaaat 101 |||||||||||| | || |||||||| ||||||||||| | ||||||||| | |||| Sbjct: 611 gaacattttgcgaccttccattaaaaaagccaattgttcaaagtgggagcaagtgaaaat 670 Query: 102 gccttcaagtgttagatccctggtggtcttaaatctggacaactacgccagtggaaagca 161 ||||||||| |||||||||||||| || |||||| | || | | |||||||| || Sbjct: 671 gccttcaagcgttagatccctggttgtgttaaatttaaccatttctggcagtggaagcca 730 Query: 162 tccatggggtgatcttaaaccggattatcttgaaaagagaggttttgttgaagctcattc 221 ||||||||||||||| | ||| || ||||| |||||| ||| ||||||||||| ||||| Sbjct: 731 tccatggggtgatctaagacctgagtatctcaaaaagaaaggctttgttgaagcccattc 790 Query: 222 agacgacggtttgattgaaatatttggtctgaaagaaggctggcatgcttccttcgttat 281 | | || || ||| ||||||||||||||||||| ||||| ||||||||||| || || || Sbjct: 791 acaagatggcttgcttgaaatatttggtctgaaggaaggttggcatgcttcatttgtcat 850 Query: 282 ggctgagcttatcaaagcaaagcacatcgctcaggctgcagctatcaagttcgaaatgag 341 ||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 851 ggccgagcttatcaaagcaaagcacattgcccaggctgcggctatcaagttcgaaatgag 910 Query: 342 gggaggcgagtgggatcgagcatatgttcaaatggacggcgagccatggaagcaaccact 401 ||| ||||||||| | |||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 911 gggtggcgagtggaaccgagcatatgttcagatggacggagagccgtggaaacaaccgct 970 Query: 402 catccaggatcagtcgacaattgtggaaataaacaaggttccctatcactcccggatgat 461 | ||||| || || || || |||||||||||||| ||||| ||||| || | ||||| Sbjct: 971 gctacaggagcactcaaccatcgtggaaataaacaaagttccgtatcattctctcatgat 1030 Query: 462 aaacggggattcatgagattt 482 ||||||||| | ||||||||| Sbjct: 1031 aaacggggagtaatgagattt 1051
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 201 aggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaagaagg 260 ||||||||| ||||||||||| || || || ||| |||||||||| |||||||||||||| Sbjct: 33495895 aggttttgtcgaagctcattccgatgatggattgcttgaaatattcggtctgaaagaagg 33495836 Query: 261 ctggcatgcttccttcgttatggctgagcttatcaaagcaaagcacatcgctcagg 316 ||||||||||| ||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 33495835 ttggcatgcttcattcgttatggctgagctaattaaagcaaagcacattgctcagg 33495780 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 109 agtgttagatccctggtggtcttaaatctggacaactacgccagtggaaagcatccatgg 168 ||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||| Sbjct: 33496282 agtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggcatccatgg 33496223 Query: 169 ggtgatcttaaaccggattatcttgaaaag 198 |||||||||||||| ||||| ||||||||| Sbjct: 33496222 ggtgatcttaaacctgattaccttgaaaag 33496193 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 312 tcaggctgcagctatcaagttcgaaatgaggggaggcgagtgggatcgagcatatgttca 371 |||||||||||| |||||||| ||||||||||| ||| | ||| |||| || |||||||| Sbjct: 33495490 tcaggctgcagccatcaagtttgaaatgaggggtggccaatggaatcgtgcgtatgttca 33495431 Query: 372 aatggacggcgagccatggaagcaaccactcatccaggatcagtcgacaattgtggaaat 431 ||||| || ||||||||||| ||||||||| | ||||| ||||| || ||| | || || Sbjct: 33495430 gatggatggagagccatggaaacaaccactcctacaggagcagtcaaccattatcgagat 33495371 Query: 432 aaacaaggttcc 443 |||||| ||||| Sbjct: 33495370 aaacaaagttcc 33495359 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 42 gaacattttgcggctttacattaaaagggccaattgttctgaatgggagcaaattcaaat 101 |||||||||||| ||||||||||||| | |||||||||||||||||||||| || ||| Sbjct: 33497174 gaacattttgcgactttacattaaaaaagtcaattgttctgaatgggagcaagttacaat 33497115 Query: 102 gccttcaag 110 ||||||||| Sbjct: 33497114 gccttcaag 33497106
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 201 aggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaagaagg 260 ||||||||| ||||||||||| || || || ||| |||||||||| |||||||||||||| Sbjct: 70770 aggttttgtcgaagctcattccgatgatggattgcttgaaatattcggtctgaaagaagg 70711 Query: 261 ctggcatgcttccttcgttatggctgagcttatcaaagcaaagcacatcgctcagg 316 ||||||||||| ||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 70710 ttggcatgcttcattcgttatggctgagctaattaaagcaaagcacattgctcagg 70655 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 109 agtgttagatccctggtggtcttaaatctggacaactacgccagtggaaagcatccatgg 168 ||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||| Sbjct: 71157 agtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggcatccatgg 71098 Query: 169 ggtgatcttaaaccggattatcttgaaaag 198 |||||||||||||| ||||| ||||||||| Sbjct: 71097 ggtgatcttaaacctgattaccttgaaaag 71068 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 312 tcaggctgcagctatcaagttcgaaatgaggggaggcgagtgggatcgagcatatgttca 371 |||||||||||| |||||||| ||||||||||| ||| | ||| |||| || |||||||| Sbjct: 70365 tcaggctgcagccatcaagtttgaaatgaggggtggccaatggaatcgtgcgtatgttca 70306 Query: 372 aatggacggcgagccatggaagcaaccactcatccaggatcagtcgacaattgtggaaat 431 ||||| || ||||||||||| ||||||||| | ||||| ||||| || ||| | || || Sbjct: 70305 gatggatggagagccatggaaacaaccactcctacaggagcagtcaaccattatcgagat 70246 Query: 432 aaacaaggttcc 443 |||||| ||||| Sbjct: 70245 aaacaaagttcc 70234 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 42 gaacattttgcggctttacattaaaagggccaattgttctgaatgggagcaaattcaaat 101 |||||||||||| ||||||||||||| | |||||||||||||||||||||| || ||| Sbjct: 72049 gaacattttgcgactttacattaaaaaagtcaattgttctgaatgggagcaagttacaat 71990 Query: 102 gccttcaag 110 ||||||||| Sbjct: 71989 gccttcaag 71981
>gb|AY389743.1| Hyacinthus orientalis diacylglycerol kinase mRNA, partial cds Length = 758 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 187 tatcttgaaaagagaggttttgttgaagctcattcagacgacggtttgattgaaatattt 246 ||||||||||||||||| ||||||||| | ||| ||||| | |||||| ||||||| ||| Sbjct: 335 tatcttgaaaagagaggctttgttgaatcccatgcagaccatggtttgcttgaaatcttt 394 Query: 247 ggtctgaaagaaggctggcatgc 269 ||||| || |||| |||||||| Sbjct: 395 ggtcttaagcaaggatggcatgc 417
>ref|XM_480995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 193 gaaaagagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctg 252 ||||||||||| ||||| |||||||| |||||||| ||| | ||||||||||||| || Sbjct: 1297 gaaaagagaggatttgtcgaagctcaatcagacgatggtcttcttgaaatatttggattg 1356 Query: 253 aaagaaggctggcatgcttccttcgttatggctgagcttatcaaagcaaagcacatcgct 312 || |||| |||||||| ||| | || |||| ||| || || ||||||||||| ||| Sbjct: 1357 aagcaagggtggcatgcatcccttgtgatggttgaactaatatctgcaaagcacatagct 1416 Query: 313 caggctgcagc 323 ||||| ||||| Sbjct: 1417 caggcagcagc 1427 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1474 caaatggatggggagccatggaagcaacca 1503
>emb|BX820215.1|CNS0A8F8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1665 Score = 60.0 bits (30), Expect = 8e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1290 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1349 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||||| || |||| ||||| || Sbjct: 1350 gaagcacattgtgatgatggtttgatagagattttcggtcttaagcaaggatggcacgcg 1409 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1410 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1459 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1509 caaatggatggtgagccatggaagcaacca 1538
>emb|BX819738.1|CNS0A8G9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1817 Score = 60.0 bits (30), Expect = 8e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1276 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1335 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||||| || |||| ||||| || Sbjct: 1336 gaagcacattgtgatgatggtttgatagagattttcggtcttaagcaaggatggcacgcg 1395 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1396 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1445 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1495 caaatggatggtgagccatggaagcaacca 1524
>emb|BX819736.1|CNS0A8FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1828 Score = 60.0 bits (30), Expect = 8e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1289 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1348 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||||| || |||| ||||| || Sbjct: 1349 gaagcacattgtgatgatggtttgatagagattttcggtcttaagcaaggatggcacgcg 1408 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1409 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1458 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1508 caaatggatggtgagccatggaagcaacca 1537
>ref|NM_179649.2| Arabidopsis thaliana diacylglycerol kinase AT2G18730 mRNA, complete cds Length = 1845 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1290 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1349 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||| | || |||| ||||| || Sbjct: 1350 gaagcacattgtgatgatggtttgatagagattttcggttttaagcaaggatggcacgcg 1409 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1410 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1459 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1509 caaatggatggtgagccatggaagcaacca 1538
>gb|AY141990.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds Length = 1467 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1144 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1203 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||| | || |||| ||||| || Sbjct: 1204 gaagcacattgtgatgatggtttgatagagattttcggttttaagcaaggatggcacgcg 1263 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1264 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1313 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1363 caaatggatggtgagccatggaagcaacca 1392
>gb|AY064982.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds Length = 1785 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1233 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1292 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||| | || |||| ||||| || Sbjct: 1293 gaagcacattgtgatgatggtttgatagagattttcggttttaagcaaggatggcacgcg 1352 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1353 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1402 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1452 caaatggatggtgagccatggaagcaacca 1481
>emb|BX820590.1|CNS0A8R4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1742 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 151 agtggaaagcatccatggggtgatcttaaaccggattatcttgaaaagagaggttttgtt 210 ||||||| ||||| ||||| |||| |||||||| ||||| || |||||||| ||||| Sbjct: 1231 agtggaagccatccttggggcaatctaaaaccggactatctagagaagagaggctttgtg 1290 Query: 211 gaagctcattcagacgacggtttgattgaaatatttggtctgaaagaaggctggcatgct 270 ||||| |||| || || |||||||| || || || ||| | || |||| ||||| || Sbjct: 1291 gaagcacattgtgatgatggtttgatagagattttcggttttaagcaaggatggcacgcg 1350 Query: 271 tccttcgttatggctgagcttatcaaagcaaagcacatcgctcaggctgc 320 || || || ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1351 tcatttgtcatggctgagctcatctctgccaagcacatagctcaggctgc 1400 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 1450 caaatggatggtgagccatggaagcaacca 1479
>ref|NM_125152.1| Arabidopsis thaliana diacylglycerol kinase AT5G57690 mRNA, complete cds Length = 1497 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 257 aaggctggcatgcttccttcgttatggctgagcttat 293 |||| |||||||||||||| ||||||| ||||||||| Sbjct: 1247 aaggatggcatgcttcctttgttatggttgagcttat 1283 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 184 gattatcttgaaaagagaggttttgt 209 |||||||||||||| ||||||||||| Sbjct: 1174 gattatcttgaaaaaagaggttttgt 1199
>gb|DQ447086.1| Arabidopsis thaliana clone pENTR221-At5g57690 diacylglycerol kinase (At5g57690) mRNA, complete cds Length = 1464 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 257 aaggctggcatgcttccttcgttatggctgagcttat 293 |||| |||||||||||||| ||||||| ||||||||| Sbjct: 1247 aaggatggcatgcttcctttgttatggttgagcttat 1283 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 184 gattatcttgaaaagagaggttttgt 209 |||||||||||||| ||||||||||| Sbjct: 1174 gattatcttgaaaaaagaggttttgt 1199
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 197 agagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaag 256 ||||||| ||||| |||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 9122494 agagaggatttgtcgaagctcaatcagacgatggtcttcttgaaatatttggattgaagc 9122435 Query: 257 aaggctggcatgc 269 |||| |||||||| Sbjct: 9122434 aagggtggcatgc 9122422 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 9122036 caaatggatggggagccatggaagcaacca 9122007
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 197 agagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaag 256 ||||||| ||||| |||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 132804 agagaggatttgtcgaagctcaatcagacgatggtcttcttgaaatatttggattgaagc 132745 Query: 257 aaggctggcatgc 269 |||| |||||||| Sbjct: 132744 aagggtggcatgc 132732 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 132346 caaatggatggggagccatggaagcaacca 132317
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Minus Query: 197 agagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaag 256 ||||||| ||||| |||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 57988 agagaggatttgtcgaagctcaatcagacgatggtcttcttgaaatatttggattgaagc 57929 Query: 257 aaggctggcatgc 269 |||| |||||||| Sbjct: 57928 aagggtggcatgc 57916 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 57530 caaatggatggggagccatggaagcaacca 57501
>dbj|AB018118.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRI1 Length = 50700 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 257 aaggctggcatgcttccttcgttatggctgagcttat 293 |||| |||||||||||||| ||||||| ||||||||| Sbjct: 19971 aaggatggcatgcttcctttgttatggttgagcttat 19935
>emb|AJ578582.1|EGU578582 Elaeis guineensis microsatellite DNA, clone mEgCIR2149 Length = 348 Score = 46.1 bits (23), Expect = 0.12 Identities = 74/91 (81%) Strand = Plus / Plus Query: 197 agagaggttttgttgaagctcattcagacgacggtttgattgaaatatttggtctgaaag 256 ||||||| |||||||| |||||| |||| || ||| | ||||||||||||| | || Sbjct: 201 agagaggctttgttgaggctcatgcagatgatggtctacttgaaatatttggaataaagc 260 Query: 257 aaggctggcatgcttccttcgttatggctga 287 |||| ||||||||||| || |||||| |||| Sbjct: 261 aaggttggcatgcttcatttgttatgactga 291
>gb|BT009326.1| Triticum aestivum clone wlm24.pk0016.f9:fis, full insert mRNA sequence Length = 1957 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 376 gacggcgagccatggaagcaaccactc 402 |||||||||||||||||||| |||||| Sbjct: 1322 gacggcgagccatggaagcagccactc 1348
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 caaatggacggcgagccatggaagcaacca 399 |||||||| || |||||||||||||||||| Sbjct: 41458 caaatggatggtgagccatggaagcaacca 41487
>dbj|AB115743.1| Cavia porcellus CYP2B18B gne for cytochrome P450, partial cds Length = 19455 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 gttctgaatgggagcaaattca 98 |||||||||||||||||||||| Sbjct: 14526 gttctgaatgggagcaaattca 14547
>emb|AL731717.11| Mouse DNA sequence from clone RP23-92C4 on chromosome X, complete sequence Length = 234900 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tgggagcaaattcaaatgcct 105 ||||||||||||||||||||| Sbjct: 170566 tgggagcaaattcaaatgcct 170586
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 4187 gagatttccctatgtcaatc 4168
>gb|AC186368.1| Pan troglodytes chromosome 7 clone CH251-329G12, complete sequence Length = 146205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 caaattcaaatgccttcaag 110 |||||||||||||||||||| Sbjct: 123449 caaattcaaatgccttcaag 123468
>gb|AC165243.2| Echinops telfairi, clone Echinops telfairi -24240357E2, complete sequence Length = 35984 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 ggctggcatgcttccttcgttatg 282 |||||||||||||||||| ||||| Sbjct: 28150 ggctggcatgcttccttccttatg 28127
>gb|AY266443.1| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE element Lauren, partial sequence; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 18901 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 15924 gagatttccctatgtcaatc 15943
>gb|AY266442.1| Hordeum vulgare LINE element Lauren, partial sequence; MLA6-2 (Mla6-2) gene, complete cds, alternatively spliced; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 17053 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 14660 gagatttccctatgtcaatc 14679
>ref|XM_548324.2| PREDICTED: Canis familiaris similar to GTPase activating RANGAP domain-like 4 (LOC491204), mRNA Length = 2751 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 atggctgagcttatcaaagc 299 |||||||||||||||||||| Sbjct: 2502 atggctgagcttatcaaagc 2483
>emb|AL359273.11| Human DNA sequence from clone RP11-376N17 on chromosome 1 Contains the gene for dnaj-like protein (LOC148418), the urate oxidase (UOX) pseudogene, a novel pseudogene and the gene for DNase II-like acid DNase (DLAD), complete sequence Length = 205034 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 caaattcaaatgccttcaag 110 |||||||||||||||||||| Sbjct: 151390 caaattcaaatgccttcaag 151409
>emb|AL391743.1|SPBC36B7 S.pombe chromosome II cosmid c36B7 Length = 16169 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ctgaatgggagcaaattcaaatgc 103 |||| ||||||||||||||||||| Sbjct: 6971 ctgattgggagcaaattcaaatgc 6994
>gb|AC128039.4| Rattus norvegicus BAC CH230-394A24 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 164278 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gatagtctatgtacagttta 533 |||||||||||||||||||| Sbjct: 57997 gatagtctatgtacagttta 57978
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 180584 gagatttccctatgtcaatc 180565
>emb|BX571809.10| Zebrafish DNA sequence from clone CH211-222G23 in linkage group 9, complete sequence Length = 193388 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aattcaaatgccttcaagtg 112 |||||||||||||||||||| Sbjct: 68857 aattcaaatgccttcaagtg 68838
>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic sequence Length = 7321 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 1359 gagatttccctatgtcaatc 1378
>gb|AF334602.1|AF334602 Homo sapiens endonuclease DLAD (DLAD) gene, complete cds Length = 19164 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 caaattcaaatgccttcaag 110 |||||||||||||||||||| Sbjct: 12304 caaattcaaatgccttcaag 12323
>ref|NM_001021893.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC36B7.04), partial mRNA Length = 1200 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ctgaatgggagcaaattcaaatgc 103 |||| ||||||||||||||||||| Sbjct: 569 ctgattgggagcaaattcaaatgc 592
>emb|BX321912.5| Zebrafish DNA sequence from clone DKEYP-32H12 in linkage group 11, complete sequence Length = 157289 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 gattgaaatatttggtctgaaaga 257 ||||| |||||||||||||||||| Sbjct: 146922 gattgtaatatttggtctgaaaga 146945
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and MLA1 (Mla1) gene, complete cds Length = 18958 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gagatttccctatgtcaatc 495 |||||||||||||||||||| Sbjct: 18521 gagatttccctatgtcaatc 18540
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 ttctgaatgggagcaaattcaaat 101 |||| ||||||||||||||||||| Sbjct: 245131 ttcttaatgggagcaaattcaaat 245154
>gb|M81878.1|CLONAGH Clostridium perfringens hyaluronidase (nagH) gene, complete cds; and unknown genes Length = 6553 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 ttctgaatgggagcaaattcaaat 101 |||| ||||||||||||||||||| Sbjct: 4575 ttcttaatgggagcaaattcaaat 4598
>gb|AC130613.7| Rattus norvegicus 1 BAC CH230-2P2 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 63040 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gatagtctatgtacagttta 533 |||||||||||||||||||| Sbjct: 44288 gatagtctatgtacagttta 44269
>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence Length = 208059 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tcaaagcaaagcacatcgct 312 |||||||||||||||||||| Sbjct: 101635 tcaaagcaaagcacatcgct 101616 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,143,587 Number of Sequences: 3902068 Number of extensions: 4143587 Number of successful extensions: 67207 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67063 Number of HSP's gapped (non-prelim): 141 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)