Clone Name | baak4f08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... | 25 | 0.85 | 2 | FZD1_HUMAN (Q9UP38) Frizzled 1 precursor (Frizzled-1) (Fz-1) (hF... | 29 | 4.1 | 3 | PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (... | 28 | 7.1 |
---|
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 25.4 bits (54), Expect(2) = 0.85 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +3 Query: 204 WKPLKQISGLEPDPDAEE*GATVRPAAA----SSHLSPYTP 314 ++P + SGL DP EE G VR S+ +SP+ P Sbjct: 1518 YEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPP 1558 Score = 24.6 bits (52), Expect(2) = 0.85 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = +2 Query: 101 QGSVQGRAAVPGHAPRPPPQSQG 169 QGSV P H P PP QG Sbjct: 1487 QGSVTAPGGHPRHKPGPPQAPQG 1509
>FZD1_HUMAN (Q9UP38) Frizzled 1 precursor (Frizzled-1) (Fz-1) (hFz1) (FzE1)| Length = 647 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 9/41 (21%) Frame = +2 Query: 86 LGLRGQGSVQ--GRAAVPGHAPRPPPQSQ-------GDRGM 181 LG+R Q + Q G+ PG P PPPQ Q G+RG+ Sbjct: 68 LGVRAQAAGQGPGQGPGPGQQPPPPPQQQQSGQQYNGERGI 108
>PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1293 Score = 28.5 bits (62), Expect = 7.1 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = -1 Query: 394 TEPRCQMYTYVHHCPPLVVHKKEEAENGV*GER*DEAAAGRTVAPHSSASGSGSRPDICF 215 TEP + H P + A G GE DE A GR GS+P Sbjct: 282 TEPMHVLMKVETHNHPTAISPYPGAATGSGGEIRDEGATGR-----------GSKPKAGL 330 Query: 214 SGFQMNFLQLP 182 +GF ++ L++P Sbjct: 331 TGFSVSNLKIP 341 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,282,396 Number of Sequences: 219361 Number of extensions: 1052477 Number of successful extensions: 3696 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3688 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)