ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... 25 0.85
2FZD1_HUMAN (Q9UP38) Frizzled 1 precursor (Frizzled-1) (Fz-1) (hF... 29 4.1
3PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (... 28 7.1

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 25.4 bits (54), Expect(2) = 0.85
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 204  WKPLKQISGLEPDPDAEE*GATVRPAAA----SSHLSPYTP 314
            ++P +  SGL  DP  EE G  VR        S+ +SP+ P
Sbjct: 1518 YEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPP 1558



 Score = 24.6 bits (52), Expect(2) = 0.85
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 101  QGSVQGRAAVPGHAPRPPPQSQG 169
            QGSV      P H P PP   QG
Sbjct: 1487 QGSVTAPGGHPRHKPGPPQAPQG 1509



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>FZD1_HUMAN (Q9UP38) Frizzled 1 precursor (Frizzled-1) (Fz-1) (hFz1) (FzE1)|
          Length = 647

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 9/41 (21%)
 Frame = +2

Query: 86  LGLRGQGSVQ--GRAAVPGHAPRPPPQSQ-------GDRGM 181
           LG+R Q + Q  G+   PG  P PPPQ Q       G+RG+
Sbjct: 68  LGVRAQAAGQGPGQGPGPGQQPPPPPQQQQSGQQYNGERGI 108



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>PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1293

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -1

Query: 394 TEPRCQMYTYVHHCPPLVVHKKEEAENGV*GER*DEAAAGRTVAPHSSASGSGSRPDICF 215
           TEP   +     H  P  +     A  G  GE  DE A GR           GS+P    
Sbjct: 282 TEPMHVLMKVETHNHPTAISPYPGAATGSGGEIRDEGATGR-----------GSKPKAGL 330

Query: 214 SGFQMNFLQLP 182
           +GF ++ L++P
Sbjct: 331 TGFSVSNLKIP 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,282,396
Number of Sequences: 219361
Number of extensions: 1052477
Number of successful extensions: 3696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3688
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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