ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbaak4p23 | 374 | AV912723 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 338 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 141 | -- | --- | - | -- | --- | - |
| rbaak4p22 | 268 | AV912722 | not_full | emb|AJ890016.1| Triticum aestivum partial mRNA for serine carboxypeptidase II, (cbp2 gene), cultivar Wyuna, from endosperm tissue Length = 892 | 14 | not_full | CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine L | 12 | -- | --- | - | -- | --- | - |
| rbaak4p20 | 414 | AV912721 | not_full | ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 | 187 | not_full | CRTC3_ARATH (O04153) Calreticulin-3 precursor Length = 424 | 5 | -- | --- | - | -- | --- | - |
| rbaak4p19 | 628 | AV912720 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 458 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 158 | -- | --- | - | -- | --- | - |
| rbaak4p17 | 637 | AV912719 | not_full | ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 | 254 | not_full | TIP12_ORYSA (Q94CS9) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein 1.2) (OsTIP1.2) Length = 252 | 185 | -- | --- | - | -- | --- | - |
| rbaak4p15 | 164 | AV912718 | not_full | emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 | 87 | not_full | ENGC_PROMA (Q7VEJ4) Probable GTPase engC (EC 3.6.1.-) Length = 309 | 1 | -- | --- | - | -- | --- | - |
| rbaak4p14 | 102 | AV912717 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_NEUTE (P19164) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 478 | 486 | -- | --- | - | -- | --- | - |
| rbaak4p13 | 514 | AV832676 | not_full | ref|XM_469219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3742 | 52 | not_full | CHMP7_BRARE (Q6PBQ2) Protein CHMP7 Length = 457 | 53 | -- | --- | - | -- | --- | - |
| rbaak4p11 | 221 | AV912716 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 15 | not_full | CARA_ZYMMO (O50235) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) Length = 374 | 2 | -- | --- | - | -- | --- | - |
| rbaak4p10 | 598 | AV912715 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 238 | not_full | RK14_WHEAT (Q95H51) Chloroplast 50S ribosomal protein L14 Length = 123 | 125 | -- | --- | - | -- | --- | - |
| rbaak4p09 | 191 | AV912714 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 180 | not_full | BCA3_HUMAN (Q9NQ31) Proline-rich protein BCA3 (Breast cancer-associated gene 3 protein) (PKA-interacting protein) (AKIP1) Length = 210 | 3 | -- | --- | - | -- | --- | - |
| rbaak4p08 | 502 | AV912713 | not_full | emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV90) Length = 660 | 40 | not_full | ELI9_HORVU (P14897) Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP) Length = 172 | 28 | -- | --- | - | -- | --- | - |
| rbaak4p07 | 568 | AV912712 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 36 | not_full | AGUA_ERWCT (Q6CZ80) Putative agmatine deiminase (EC 3.5.3.12) (Agmatine iminohydrolase) Length = 368 | 5 | -- | --- | - | -- | --- | - |
| rbaak4p06 | 265 | AV912711 | not_full | gb|BC004909.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:4657 IMAGE:3530715), complete cds Length = 1854 | 12 | not_full | FLGE_AQUAE (O67711) Flagellar hook protein flgE Length = 482 | 16 | -- | --- | - | -- | --- | - |
| rbaak4p05 | 312 | AV912710 | not_full | emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene Length = 687 | 32 | not_full | CR14_HORVU (P26154) Cold-regulated protein BLT14 Length = 88 | 19 | -- | --- | - | -- | --- | - |
| rbaak4p03 | 196 | AV912709 | not_full | gb|BT009269.1| Triticum aestivum clone wlk8.pk0006.a4:fis, full insert mRNA sequence Length = 788 | 34 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4p02 | 178 | AV832675 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 90 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4p01 | 495 | AV912708 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | IN37_SPIOL (P23525) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) Length = 344 | 10 | -- | --- | - | -- | --- | - |
| rbaak4o24 | 37 | AV832674 | not_full | gb|AY772669.1| Elymus sibiricus ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, complete cds; chloroplast Length = 1510 | 276 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4o23 | 615 | AV912707 | not_full | ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 | 46 | not_full | CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger 1c) (OsCAX1c) Length = 450 | 29 | -- | --- | - | -- | --- | - |
| rbaak4o22 | 630 | AV912706 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4o21 | 436 | AV912705 | not_full | emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin Length = 2244 | 114 | not_full | FER_WHEAT (P00228) Ferredoxin, chloroplast precursor Length = 143 | 114 | -- | --- | - | -- | --- | - |
| rbaak4o20 | 514 | AV912704 | not_full | gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase mRNA, 3NULL UTR and partial cds Length = 583 | 54 | not_full | ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 | 26 | -- | --- | - | -- | --- | - |
| rbaak4o19 | 553 | AV912703 | not_full | gb|AY596589.1| Saccharum officinarum clone SCCCRZ2C04A09, complete sequence Length = 2194 | 31 | not_full | PSL2_MOUSE (Q9JJF9) Signal peptide peptidase-like 2A (EC 3.4.23.-) (SPP-like 2A protein) (SPPL2a protein) (Intramembrane protease 3) (IMP3) (Presenilin-like protein 2) Length = 523 | 16 | -- | --- | - | -- | --- | - |
| rbaak4o18 | 95 | AV912702 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_PERSE (O04435) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 469 | 495 | -- | --- | - | -- | --- | - |
| rbaak4o17 | 112 | AV912701 | not_full | ref|XM_471731.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 | 54 | not_full | RPIA_THEVO (Q97AU2) Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI) Length = 241 | 2 | -- | --- | - | -- | --- | - |
| rbaak4o16 | 578 | AV912700 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 447 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 165 | -- | --- | - | -- | --- | - |
| rbaak4o15 | 654 | AV912699 | not_full | dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full insert sequence Length = 2017 | 76 | not_full | DNAK2_SYNY3 (P22358) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat shock 70 kDa protein 2) (HSP70-2) Length = 636 | 24 | -- | --- | - | -- | --- | - |
| rbaak4o14 | 379 | AV912698 | not_full | ref|XM_470091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1344 | 18 | not_full | GLNA_FREDI (P33035) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) Length = 470 | 5 | -- | --- | - | -- | --- | - |
| rbaak4o13 | 231 | AV912697 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4o12 | 538 | AV912696 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 119 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 127 | -- | --- | - | -- | --- | - |
| rbaak4o11 | 713 | AV912695 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4o10 | 494 | AV912694 | not_full | gb|BT016814.1| Zea mays clone Contig647 mRNA sequence Length = 1009 | 23 | not_full | CHIT1_DROME (Q9W5U3) Probable chitinase 1 (EC 3.2.1.14) Length = 508 | 17 | -- | --- | - | -- | --- | - |
| rbaak4o09 | 592 | AV912693 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 119 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 113 | -- | --- | - | -- | --- | - |
| rbaak4o08 | 25 | AV832673 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4o06 | 135 | AV912692 | not_full | gb|AC124484.5| Mus musculus BAC clone RP24-128N20 from chromosome 12, complete sequence Length = 204507 | 104 | not_full | PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2) Length = 411 | 4 | -- | --- | - | -- | --- | - |
| rbaak4o05 | 273 | AV912691 | not_full | gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 | 3 | not_full | G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 | 6 | -- | --- | - | -- | --- | - |
| rbaak4o04 | 202 | AV912690 | not_full | gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 | 98 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 12 | -- | --- | - | -- | --- | - |
| rbaak4o03 | 666 | AV912689 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 419 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 150 | -- | --- | - | -- | --- | - |
| rbaak4o02 | 453 | AV912688 | not_full | dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1783 | 75 | not_full | M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP) (Solute carrier family 25 member 11) Length = 313 | 96 | -- | --- | - | -- | --- | - |
| rbaak4o01 | 624 | AV912687 | not_full | emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 | 93 | not_full | ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 | 462 | -- | --- | - | -- | --- | - |
| rbaak4n24 | 501 | AV912686 | not_full | emb|X57952.1|TAPRK T.aestivum PRK gene for ribulose-5-phosphate kinase Length = 2501 | 60 | not_full | KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) Length = 404 | 15 | -- | --- | - | -- | --- | - |
| rbaak4n23 | 79 | AV912685 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 12 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 2 | -- | --- | - | -- | --- | - |
| rbaak4n22 | 577 | AV912684 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4n21 | 111 | AV912683 | not_full | emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase 1 (cmt1 gene) Length = 2441 | 1 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4n20 | 517 | AV912682 | not_full | gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 | 500 | not_full | RL3_ORYSA (P35684) 60S ribosomal protein L3 Length = 388 | 65 | -- | --- | - | -- | --- | - |
| rbaak4n19 | 477 | AV832672 | not_full | dbj|AK071593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103G12, full insert sequence Length = 1564 | 22 | not_full | M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP) (Solute carrier family 25 member 11) Length = 313 | 144 | -- | --- | - | -- | --- | - |
| rbaak4n18 | 204 | AV912681 | not_full | gb|AY104932.1| Zea mays PCO147149 mRNA sequence Length = 2304 | 11 | not_full | TNR6_PIG (O77736) Tumor necrosis factor receptor superfamily member 6 precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 332 | 3 | -- | --- | - | -- | --- | - |
| rbaak4n17 | 110 | AV832671 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 3 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 3 | -- | --- | - | -- | --- | - |
| rbaak4n16 | 280 | AV912680 | not_full | ref|NM_185886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 | 20 | not_full | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 | 12 | -- | --- | - | -- | --- | - |
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