ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4o15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
2gb|AY108408.1| Zea mays PCO100871 mRNA sequence 98 4e-17
3ref|XM_475282.1| Oryza sativa (japonica cultivar-group), predic... 90 1e-14
4dbj|AK102235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
6dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
7dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
8gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
9gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
11gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 2.3
12dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 2.3
13gb|AY058213.1| Chlamydomonas reinhardtii putative plasma membran... 42 2.3
14gb|AC116347.2| Homo sapiens chromosome 5 clone RP11-274E7, compl... 42 2.3
15gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Canc... 42 2.3
16ref|NM_138043.3| Drosophila melanogaster CG3257-RA, transcript v... 42 2.3
17ref|NM_001038881.1| Drosophila melanogaster CG3257-RB, transcrip... 42 2.3
18gb|AY058212.1| Chlamydomonas reinhardtii putative plasma membran... 42 2.3
19gb|AY060334.1| Drosophila melanogaster GH22264 full length cDNA 42 2.3
20gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, r... 42 2.3
21gb|AC122693.1| Homo sapiens X BAC RP11-379L22 (Roswell Park Canc... 42 2.3
22gb|AC140830.2| Homo sapiens chromosome 5 clone RP11-901K15, comp... 42 2.3
23gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70... 42 2.3
24gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region fro... 42 2.3
25gb|BT001410.1| Drosophila melanogaster GH10677 full insert cDNA 42 2.3
26gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 2.3
27gb|CP000036.1| Shigella boydii Sb227, complete genome 42 2.3
28gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 2.3
29gb|M69185.1|ECOSLTY Escherichia coli soluble lytic transglycogen... 42 2.3
30gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5... 40 8.9
31gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosom... 40 8.9
32ref|XM_518227.1| PREDICTED: Pan troglodytes desmoplakin (LOC4624... 40 8.9
33gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence 40 8.9
34gb|AC145690.4| Pan troglodytes BAC clone CH251-277H18 from X, co... 40 8.9
35ref|NM_004415.2| Homo sapiens desmoplakin (DSP), transcript vari... 40 8.9
36gb|AY246561.1| Branchiostoma floridae cosmid MPMGc117J2370Q6, pa... 40 8.9
37gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, com... 40 8.9
38gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosom... 40 8.9
39gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 8.9
40ref|XM_960929.1| Plasmodium falciparum 3D7 mitochondroal chapero... 40 8.9
41emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chr... 40 8.9
42emb|AL590140.7| Human DNA sequence from clone RP11-382E3 on chro... 40 8.9
43emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on ch... 40 8.9
44emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24... 40 8.9
45emb|AL031058.1|HS512B11 Human DNA sequence from clone RP3-512B11... 40 8.9
46gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cance... 40 8.9
47emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on ch... 40 8.9
48emb|Z26590.1|MV4LYSAB Bacteriophage mv4 lysA and lysB genes 40 8.9
49emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 8.9
50emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 40 8.9
51gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 8.9
52dbj|BS000643.3| Pan troglodytes chromosome Y clone: PTB-307J21, ... 40 8.9
53dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, ... 40 8.9
54gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.9
55gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.9
56dbj|AK094986.1| Homo sapiens cDNA FLJ37667 fis, clone BRHIP2011783 40 8.9
57dbj|AK096642.1| Homo sapiens cDNA FLJ39323 fis, clone OCBBF2015081 40 8.9
58gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complet... 40 8.9
59gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, comple... 40 8.9
60gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.9
61gb|AC093591.3| Homo sapiens BAC clone RP11-50D9 from 4, complete... 40 8.9
62gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20... 40 8.9
63gb|AC009406.5| Homo sapiens BAC clone RP11-201J10 from 2, comple... 40 8.9
64gb|AE004853.1| Pseudomonas aeruginosa PAO1, section 414 of 529 o... 40 8.9
65gb|AC132152.3| Homo sapiens BAC clone CTD-2014D7 from 2, complet... 40 8.9
66ref|NM_208058.1| Eremothecium gossypii AAR162Cp (AAR162C), mRNA 40 8.9
67gb|AC004810.1|AC004810 Homo sapiens chromosome Y, clone hCIT.69_... 40 8.9
68gb|M77830.3|HUMDPI Homo sapiens desmoplakin I (DPI) mRNA, comple... 40 8.9
69emb|CT573097.3| RP43-080H03, complete sequence 40 8.9
70emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chro... 40 8.9
71emb|AL807813.6| Human DNA sequence from clone RP13-487C10 on chr... 40 8.9
72gb|AC140337.3| Mus musculus BAC clone RP23-238H7 from 1, complet... 40 8.9
73dbj|AP006136.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.9
74emb|Z79421.1|HSPA7H8 H.sapiens flow-sorted chromosome 6 TaqI fra... 40 8.9
75emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-1... 40 8.9
76gb|J05211.1|HUMDMP Human desmoplakin mRNA, 3' end 40 8.9 
>dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full
            insert sequence
          Length = 2017

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 500  gggctcttgtcaatggacgactccagtgaagaatgtagaacatgatcttccgccttttgc 559
            |||||||| || |||||||||||||  |||||| | | || ||| ||||  |||||||||
Sbjct: 1506 gggctcttatcgatggacgactccaaggaagaacgcaaaatatggtcttgtgccttttgc 1447

                                                                        
Query: 560  cgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctccaacccac 619
             ||||||||||    |||||| |||||||  ||||||||||||| |||||||| ||||||
Sbjct: 1446 tgatgcatgtatttactgtcaagcagagcgaagaggaactcagaaacagctccgacccac 1387

                                               
Query: 620  catagttttccagcagttagtccttgaaaaaatgc 654
            |||||| |||||||||||||||||||||| |||||
Sbjct: 1386 catagtcttccagcagttagtccttgaaagaatgc 1352



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 148  ccaagcagcggccacgatgtcaccaaggcaacatacgcgagcagccagactgacctcccc 207
            ||||| || ||||| ||||| || || |||| ||| || |||| |||||||||| | |||
Sbjct: 1860 ccaaggagtggccatgatgttacaaaagcaatataagcaagcaaccagactgacttaccc 1801

                                                           
Query: 208  tggtaccgggtgagcttgctcaaggatctcttgacgggagcgatggc 254
            |||||||| ||||| | | | | ||||||||| || ||||| |||||
Sbjct: 1800 tggtaccgagtgagttggtttatggatctcttaactggagcaatggc 1754
to top
>gb|AY108408.1| Zea mays PCO100871 mRNA sequence
          Length = 1119

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                       
Query: 538 aacatgatcttccgccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaa 597
           ||||||||| |  ||||| |||| ||||||||| ||||||||||| |||||| | |||||
Sbjct: 391 aacatgatcatttgccttctgcctatgcatgtaggagctgtcatgaagagcagaaaggaa 332

                                                                    
Query: 598 ctcagacacagctccaacccaccatagttttccagcagttagtccttgaaaaaatgc 654
           ||||||   ||||||||||||||||||| | |  ||||||||||||||||| |||||
Sbjct: 331 ctcagaagtagctccaacccaccatagtctccgcgcagttagtccttgaaagaatgc 275



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 118/143 (82%)
 Strand = Plus / Minus

                                                                       
Query: 106 ggatttctggactttttcctgaacaccatgaaagccagggagccaagcagcggccacgat 165
           ||||| ||||||||||||| |||    |||||||| |||||||||||||||||||| |||
Sbjct: 819 ggattcctggactttttccggaaggtgatgaaagctagggagccaagcagcggccaggat 760

                                                                       
Query: 166 gtcaccaaggcaacatacgcgagcagccagactgacctcccctggtaccgggtgagcttg 225
           || || || ||||  || || |||| ||||||||||||||| ||||| || || || | |
Sbjct: 759 gttacaaaagcaatgtaggcaagcaaccagactgacctcccttggtatcgagtcagttgg 700

                                  
Query: 226 ctcaaggatctcttgacgggagc 248
           ||||  ||||||||||| |||||
Sbjct: 699 ctcatagatctcttgacaggagc 677
to top
>ref|XM_475282.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 551  gccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagct 610
            |||||||||||||||||| | | ||| ||||| ||||||   || |||||||| ||||||
Sbjct: 1271 gccttttgccgatgcatgcaggggctatcatgtagagcaagtagaaactcagaaacagct 1212

                                                     
Query: 611  ccaacccaccatagttttccagcagttagtccttgaaaaaa 651
            || |||||||| || |||||||||||||| |||||||||||
Sbjct: 1211 cccacccaccacagctttccagcagttagcccttgaaaaaa 1171
to top
>dbj|AK102235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088B21, full
            insert sequence
          Length = 2007

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 551  gccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagct 610
            |||||||||||||||||| | | ||| ||||| ||||||   || |||||||| ||||||
Sbjct: 1340 gccttttgccgatgcatgcaggggctatcatgtagagcaagtagaaactcagaaacagct 1281

                                                     
Query: 611  ccaacccaccatagttttccagcagttagtccttgaaaaaa 651
            || |||||||| || |||||||||||||| |||||||||||
Sbjct: 1280 cccacccaccacagctttccagcagttagcccttgaaaaaa 1240
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 552      ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
                |||||||| ||||||||||    |||||| |||||||  ||||||||||||| |||||||
Sbjct: 37763001 ccttttgctgatgcatgtatttactgtcaagcagagcgaagaggaactcagaaacagctc 37762942

                         
Query: 612      caacccacc 620
                | |||||||
Sbjct: 37762941 cgacccacc 37762933



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 618      accatagttttccagcagttagtccttgaaaaaatgc 654
                |||||||| |||||||||||||||||||||| |||||
Sbjct: 37762816 accatagtcttccagcagttagtccttgaaagaatgc 37762780



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                            
Query: 148      ccaagcagcggccacgatgtcaccaaggcaacatacgcgagcagccagactgacctcccc 207
                ||||| || ||||| ||||| || || |||| ||| || |||| |||||||||| | |||
Sbjct: 37763504 ccaaggagtggccatgatgttacaaaagcaatataagcaagcaaccagactgacttaccc 37763445

                                                               
Query: 208      tggtaccgggtgagcttgctcaaggatctcttgacgggagcgatggc 254
                |||||||| ||||| | | | | ||||||||| || ||||| |||||
Sbjct: 37763444 tggtaccgagtgagttggtttatggatctcttaactggagcaatggc 37763398
to top
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 552   ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
             |||||||| ||||||||||    |||||| |||||||  ||||||||||||| |||||||
Sbjct: 91302 ccttttgctgatgcatgtatttactgtcaagcagagcgaagaggaactcagaaacagctc 91243

                      
Query: 612   caacccacc 620
             | |||||||
Sbjct: 91242 cgacccacc 91234



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 618   accatagttttccagcagttagtccttgaaaaaatgc 654
             |||||||| |||||||||||||||||||||| |||||
Sbjct: 91117 accatagtcttccagcagttagtccttgaaagaatgc 91081



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                         
Query: 148   ccaagcagcggccacgatgtcaccaaggcaacatacgcgagcagccagactgacctcccc 207
             ||||| || ||||| ||||| || || |||| ||| || |||| |||||||||| | |||
Sbjct: 91805 ccaaggagtggccatgatgttacaaaagcaatataagcaagcaaccagactgacttaccc 91746

                                                            
Query: 208   tggtaccgggtgagcttgctcaaggatctcttgacgggagcgatggc 254
             |||||||| ||||| | | | | ||||||||| || ||||| |||||
Sbjct: 91745 tggtaccgagtgagttggtttatggatctcttaactggagcaatggc 91699
to top
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008G24
          Length = 152736

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 552   ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
             |||||||| ||||||||||    |||||| |||||||  ||||||||||||| |||||||
Sbjct: 22249 ccttttgctgatgcatgtatttactgtcaagcagagcgaagaggaactcagaaacagctc 22190

                      
Query: 612   caacccacc 620
             | |||||||
Sbjct: 22189 cgacccacc 22181



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 618   accatagttttccagcagttagtccttgaaaaaatgc 654
             |||||||| |||||||||||||||||||||| |||||
Sbjct: 22064 accatagtcttccagcagttagtccttgaaagaatgc 22028



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                         
Query: 148   ccaagcagcggccacgatgtcaccaaggcaacatacgcgagcagccagactgacctcccc 207
             ||||| || ||||| ||||| || || |||| ||| || |||| |||||||||| | |||
Sbjct: 22752 ccaaggagtggccatgatgttacaaaagcaatataagcaagcaaccagactgacttaccc 22693

                                                            
Query: 208   tggtaccgggtgagcttgctcaaggatctcttgacgggagcgatggc 254
             |||||||| ||||| | | | | ||||||||| || ||||| |||||
Sbjct: 22692 tggtaccgagtgagttggtttatggatctcttaactggagcaatggc 22646
to top
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04,
             complete sequence
          Length = 103458

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 552   ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
             ||||||||||||||||| | | ||| ||||| ||||||   || |||||||| |||||||
Sbjct: 79793 ccttttgccgatgcatgcaggggctatcatgtagagcaagtagaaactcagaaacagctc 79852

                      
Query: 612   caacccacc 620
             | |||||||
Sbjct: 79853 ccacccacc 79861



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 626   tttccagcagttagtccttgaaaaaa 651
             |||||||||||||| |||||||||||
Sbjct: 80249 tttccagcagttagcccttgaaaaaa 80274
to top
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07,
             complete sequence
          Length = 106166

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 552   ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
             ||||||||||||||||| | | ||| ||||| ||||||   || |||||||| |||||||
Sbjct: 43280 ccttttgccgatgcatgcaggggctatcatgtagagcaagtagaaactcagaaacagctc 43339

                      
Query: 612   caacccacc 620
             | |||||||
Sbjct: 43340 ccacccacc 43348



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 626   tttccagcagttagtccttgaaaaaa 651
             |||||||||||||| |||||||||||
Sbjct: 43736 tttccagcagttagcccttgaaaaaa 43761
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                            
Query: 552      ccttttgccgatgcatgtacgagctgtcatgcagagcacagaggaactcagacacagctc 611
                ||||||||||||||||| | | ||| ||||| ||||||   || |||||||| |||||||
Sbjct: 21064415 ccttttgccgatgcatgcaggggctatcatgtagagcaagtagaaactcagaaacagctc 21064474

                         
Query: 612      caacccacc 620
                | |||||||
Sbjct: 21064475 ccacccacc 21064483



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 626      tttccagcagttagtccttgaaaaaa 651
                |||||||||||||| |||||||||||
Sbjct: 21064871 tttccagcagttagcccttgaaaaaa 21064896
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     tcagatcatcggtgatctggc 436
               |||||||||||||||||||||
Sbjct: 4628987 tcagatcatcggtgatctggc 4628967
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     tcagatcatcggtgatctggc 436
               |||||||||||||||||||||
Sbjct: 4635644 tcagatcatcggtgatctggc 4635624
to top
>gb|AY058213.1| Chlamydomonas reinhardtii putative plasma membrane-type proton ATPase
            (PMA2) gene, partial cds
          Length = 2865

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 153  cagcggccacgatgtcaccaa 173
            |||||||||||||||||||||
Sbjct: 1754 cagcggccacgatgtcaccaa 1734
to top
>gb|AC116347.2| Homo sapiens chromosome 5 clone RP11-274E7, complete sequence
          Length = 132384

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   aaagccagggagccaagcagc 156
             |||||||||||||||||||||
Sbjct: 39502 aaagccagggagccaagcagc 39522
to top
>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 138313

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   aaagccagggagccaagcagc 156
             |||||||||||||||||||||
Sbjct: 17705 aaagccagggagccaagcagc 17725
to top
>ref|NM_138043.3| Drosophila melanogaster CG3257-RA, transcript variant A (CG3257),
           mRNA
          Length = 2920

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gggcactgtgtctgcatccgt 347
           |||||||||||||||||||||
Sbjct: 636 gggcactgtgtctgcatccgt 616
to top
>ref|NM_001038881.1| Drosophila melanogaster CG3257-RB, transcript variant B (CG3257),
            mRNA
          Length = 3666

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 327  gggcactgtgtctgcatccgt 347
            |||||||||||||||||||||
Sbjct: 1382 gggcactgtgtctgcatccgt 1362
to top
>gb|AY058212.1| Chlamydomonas reinhardtii putative plasma membrane-type proton ATPase
            (PMA2) mRNA, complete cds
          Length = 4870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 153  cagcggccacgatgtcaccaa 173
            |||||||||||||||||||||
Sbjct: 1004 cagcggccacgatgtcaccaa 984
to top
>gb|AY060334.1| Drosophila melanogaster GH22264 full length cDNA
          Length = 3662

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 327  gggcactgtgtctgcatccgt 347
            |||||||||||||||||||||
Sbjct: 1366 gggcactgtgtctgcatccgt 1346
to top
>gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
             BACR27M17, complete sequence
          Length = 164443

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   gggcactgtgtctgcatccgt 347
             |||||||||||||||||||||
Sbjct: 64247 gggcactgtgtctgcatccgt 64227
to top
>gb|AC122693.1| Homo sapiens X BAC RP11-379L22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 152457

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 137  aagccagggagccaagcagcg 157
            |||||||||||||||||||||
Sbjct: 5324 aagccagggagccaagcagcg 5344
to top
>gb|AC140830.2| Homo sapiens chromosome 5 clone RP11-901K15, complete sequence
          Length = 168242

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   aaagccagggagccaagcagc 156
             |||||||||||||||||||||
Sbjct: 68112 aaagccagggagccaagcagc 68132
to top
>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
             sequence
          Length = 298827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   gggcactgtgtctgcatccgt 347
             |||||||||||||||||||||
Sbjct: 43043 gggcactgtgtctgcatccgt 43023
to top
>gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes
          Length = 338534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    tcagatcatcggtgatctggc 436
              |||||||||||||||||||||
Sbjct: 321797 tcagatcatcggtgatctggc 321777
to top
>gb|BT001410.1| Drosophila melanogaster GH10677 full insert cDNA
          Length = 2836

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gggcactgtgtctgcatccgt 347
           |||||||||||||||||||||
Sbjct: 540 gggcactgtgtctgcatccgt 520
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     tcagatcatcggtgatctggc 436
               |||||||||||||||||||||
Sbjct: 4358649 tcagatcatcggtgatctggc 4358629
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     tcagatcatcggtgatctggc 436
               |||||||||||||||||||||
Sbjct: 4509188 tcagatcatcggtgatctggc 4509168
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     tcagatcatcggtgatctggc 436
               |||||||||||||||||||||
Sbjct: 4814630 tcagatcatcggtgatctggc 4814610
to top
>gb|M69185.1|ECOSLTY Escherichia coli soluble lytic transglycogenase (slt) gene,
           complete cds
          Length = 2548

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 416 tcagatcatcggtgatctggc 436
           |||||||||||||||||||||
Sbjct: 681 tcagatcatcggtgatctggc 661
to top
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence
          Length = 219218

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    tccacttccttggcttgttc 380
              ||||||||||||||||||||
Sbjct: 127287 tccacttccttggcttgttc 127268
to top
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence
          Length = 206735

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    tccacttccttggcttgttc 380
              ||||||||||||||||||||
Sbjct: 146172 tccacttccttggcttgttc 146191
to top
>ref|XM_518227.1| PREDICTED: Pan troglodytes desmoplakin (LOC462420), mRNA
          Length = 10353

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  cggaccctggaactgcaggg 318
            ||||||||||||||||||||
Sbjct: 6316 cggaccctggaactgcaggg 6335
to top
>gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence
          Length = 1896

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  ttggcttgttcatcttcttg 389
            ||||||||||||||||||||
Sbjct: 1397 ttggcttgttcatcttcttg 1378
to top
>gb|AC145690.4| Pan troglodytes BAC clone CH251-277H18 from X, complete sequence
          Length = 163776

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 17976 aagccagggagccaagcagc 17995
to top
>ref|NM_004415.2| Homo sapiens desmoplakin (DSP), transcript variant 1, mRNA
          Length = 9730

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  cggaccctggaactgcaggg 318
            ||||||||||||||||||||
Sbjct: 5563 cggaccctggaactgcaggg 5582
to top
>gb|AY246561.1| Branchiostoma floridae cosmid MPMGc117J2370Q6, partial sequence
          Length = 29546

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   ttcatcttcttgtgtgctgt 397
             ||||||||||||||||||||
Sbjct: 13142 ttcatcttcttgtgtgctgt 13123
to top
>gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, complete sequence
          Length = 163250

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   atgaaagccagggagccaag 152
             ||||||||||||||||||||
Sbjct: 76588 atgaaagccagggagccaag 76569
to top
>gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosome 1, complete sequence
          Length = 171608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 518   gactccagtgaagaatgtagaaca 541
             ||||||||||||||| ||||||||
Sbjct: 38471 gactccagtgaagaaggtagaaca 38494
to top
>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 374    cttgttcatcttcttgtgtgctgtttat 401
              ||||| ||||||| ||||||||||||||
Sbjct: 171074 cttgtacatcttcctgtgtgctgtttat 171101
to top
>ref|XM_960929.1| Plasmodium falciparum 3D7 mitochondroal chaperone (bsc1) partial mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  tttttcctgaacaccatgaa 137
            ||||||||||||||||||||
Sbjct: 1238 tttttcctgaacaccatgaa 1257
to top
>emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chromosome 1 Contains the
             3' end of a histone deacetylase 1 (HDAC1) pseudogene, the
             3' end of the MARK1 gene for MAP/microtubule
             affinity-regulating kinase, a novel gene, a novel gene
             (FLJ14146) and a CpG island, complete sequence
          Length = 121601

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 18057 aagccagggagccaagcagc 18076
to top
>emb|AL590140.7| Human DNA sequence from clone RP11-382E3 on chromosome X, complete
            sequence
          Length = 10171

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  aagccagggagccaagcagc 156
            ||||||||||||||||||||
Sbjct: 4742 aagccagggagccaagcagc 4761
to top
>emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on chromosome X, complete
             sequence
          Length = 113526

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 21319 aagccagggagccaagcagc 21338
to top
>emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24 on chromosome Xp11.1-11.23
             Contains the ZXDB gene for zinc finger, X-linked,
             duplicated B and a CpG island, complete sequence
          Length = 96558

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 30976 aagccagggagccaagcagc 30995
to top
>emb|AL031058.1|HS512B11 Human DNA sequence from clone RP3-512B11 on chromosome 6p24-25 Contains
             the DSP gene for desmoplakin (DPI), the 5'end of a novel
             gene and a CpG island, complete sequence
          Length = 64356

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cggaccctggaactgcaggg 318
             ||||||||||||||||||||
Sbjct: 46813 cggaccctggaactgcaggg 46832
to top
>gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112126

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaggatttctggactttttc 123
             ||||||||||||||||||||
Sbjct: 67359 aaggatttctggactttttc 67378
to top
>emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on chromosome Xp11.1-11.22,
             complete sequence
          Length = 61187

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 60991 aagccagggagccaagcagc 60972
to top
>emb|Z26590.1|MV4LYSAB Bacteriophage mv4 lysA and lysB genes
          Length = 2796

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  ccttggcttgttcatcttct 387
            ||||||||||||||||||||
Sbjct: 2380 ccttggcttgttcatcttct 2361
to top
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    tttttcctgaacaccatgaa 137
              ||||||||||||||||||||
Sbjct: 129855 tttttcctgaacaccatgaa 129874
to top
>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    cagacacagctccaacccac 619
              ||||||||||||||||||||
Sbjct: 215763 cagacacagctccaacccac 215782
to top
>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 374   cttgttcatcttcttgtgtgctgtttat 401
             ||||| ||||||| ||||||||||||||
Sbjct: 12564 cttgtacatcttcctgtgtgctgtttat 12537
to top
>dbj|BS000643.3| Pan troglodytes chromosome Y clone: PTB-307J21, complete sequence
          Length = 147286

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    atgaaagccagggagccaag 152
              ||||||||||||||||||||
Sbjct: 102155 atgaaagccagggagccaag 102136
to top
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence
          Length = 199770

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  atgaaagccagggagccaag 152
            ||||||||||||||||||||
Sbjct: 1791 atgaaagccagggagccaag 1772
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     gcgatggcgtcgcggatctt 266
               ||||||||||||||||||||
Sbjct: 1316870 gcgatggcgtcgcggatctt 1316889
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 133      atgaaagccagggagccaag 152
                ||||||||||||||||||||
Sbjct: 17720629 atgaaagccagggagccaag 17720648
to top
>dbj|AK094986.1| Homo sapiens cDNA FLJ37667 fis, clone BRHIP2011783
          Length = 2751

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  aagccagggagccaagcagc 156
            ||||||||||||||||||||
Sbjct: 1243 aagccagggagccaagcagc 1224
to top
>dbj|AK096642.1| Homo sapiens cDNA FLJ39323 fis, clone OCBBF2015081
          Length = 2420

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 aagccagggagccaagcagc 156
           ||||||||||||||||||||
Sbjct: 912 aagccagggagccaagcagc 893
to top
>gb|AC093809.3| Homo sapiens BAC clone RP11-352E6 from 4, complete sequence
          Length = 162214

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 99642 aagccagggagccaagcagc 99661
to top
>gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, complete sequence
          Length = 166300

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aaagccagggagccaagcag 155
              ||||||||||||||||||||
Sbjct: 155898 aaagccagggagccaagcag 155917
to top
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    tccgccttttgccgatgcat 567
              ||||||||||||||||||||
Sbjct: 637398 tccgccttttgccgatgcat 637417
to top
>gb|AC093591.3| Homo sapiens BAC clone RP11-50D9 from 4, complete sequence
          Length = 158758

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 26612 aagccagggagccaagcagc 26593
to top
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence
          Length = 175223

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    atgaaagccagggagccaag 152
              ||||||||||||||||||||
Sbjct: 174484 atgaaagccagggagccaag 174503
to top
>gb|AC009406.5| Homo sapiens BAC clone RP11-201J10 from 2, complete sequence
          Length = 156817

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aaagccagggagccaagcag 155
             ||||||||||||||||||||
Sbjct: 67475 aaagccagggagccaagcag 67456
to top
>gb|AE004853.1| Pseudomonas aeruginosa PAO1, section 414 of 529 of the complete
            genome
          Length = 11064

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  gcgatggcgtcgcggatctt 266
            ||||||||||||||||||||
Sbjct: 1374 gcgatggcgtcgcggatctt 1355
to top
>gb|AC132152.3| Homo sapiens BAC clone CTD-2014D7 from 2, complete sequence
          Length = 142372

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   aaagccagggagccaagcag 155
             ||||||||||||||||||||
Sbjct: 29841 aaagccagggagccaagcag 29860
to top
>ref|NM_208058.1| Eremothecium gossypii AAR162Cp (AAR162C), mRNA
          Length = 3516

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 tccgccttttgccgatgcat 567
           ||||||||||||||||||||
Sbjct: 185 tccgccttttgccgatgcat 166
to top
>gb|AC004810.1|AC004810 Homo sapiens chromosome Y, clone hCIT.69_H_8, complete sequence
          Length = 86491

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   atgaaagccagggagccaag 152
             ||||||||||||||||||||
Sbjct: 85238 atgaaagccagggagccaag 85219
to top
>gb|M77830.3|HUMDPI Homo sapiens desmoplakin I (DPI) mRNA, complete cds
          Length = 9588

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  cggaccctggaactgcaggg 318
            ||||||||||||||||||||
Sbjct: 5563 cggaccctggaactgcaggg 5582
to top
>emb|CT573097.3| RP43-080H03, complete sequence
          Length = 174747

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   aagccagggagccaagcagc 156
             ||||||||||||||||||||
Sbjct: 96741 aagccagggagccaagcagc 96722
to top
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete
             sequence
          Length = 131385

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   gcagagcacagaggaactca 601
             ||||||||||||||||||||
Sbjct: 67791 gcagagcacagaggaactca 67772
to top
>emb|AL807813.6| Human DNA sequence from clone RP13-487C10 on chromosome X Contains a
            neuronal apoptosis inhibitor protein 2 (NALP2)
            pseudogene, complete sequence
          Length = 106958

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  aagccagggagccaagcagc 156
            ||||||||||||||||||||
Sbjct: 1804 aagccagggagccaagcagc 1785
to top
>gb|AC140337.3| Mus musculus BAC clone RP23-238H7 from 1, complete sequence
          Length = 229594

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 518   gactccagtgaagaatgtagaaca 541
             ||||||||||||||| ||||||||
Sbjct: 24959 gactccagtgaagaaggtagaaca 24936
to top
>dbj|AP006136.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT30K08, TM0237,
              complete sequence
          Length = 114468

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    ccatgaaagccagggagcca 150
              ||||||||||||||||||||
Sbjct: 109069 ccatgaaagccagggagcca 109050
to top
>emb|Z79421.1|HSPA7H8 H.sapiens flow-sorted chromosome 6 TaqI fragment, SC6pA7H8
          Length = 327

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 cggaccctggaactgcaggg 318
           ||||||||||||||||||||
Sbjct: 300 cggaccctggaactgcaggg 319
to top
>emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-16N22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    aaaaacaccatatgatattactta 96
             |||||||||||||||| |||||||
Sbjct: 65578 aaaaacaccatatgatcttactta 65555
to top
>gb|J05211.1|HUMDMP Human desmoplakin mRNA, 3' end
          Length = 5259

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  cggaccctggaactgcaggg 318
            ||||||||||||||||||||
Sbjct: 1927 cggaccctggaactgcaggg 1946


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,901,503
Number of Sequences: 3902068
Number of extensions: 4901503
Number of successful extensions: 88877
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88520
Number of HSP's gapped (non-prelim): 355
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top