ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4p09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 Score = 307 bits (155), Expect = 7e-81 Identities = 184/191 (96%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 1 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaa-gggagtgaa 59 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 684 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaaagggagtgaa 625 Query: 60 caaacaatcaaacactgatacaaaaaccgatacaacagtgagcggccaagtagagctggc 119 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 624 caaacaatcaaacactgatacaaaa-ccgatacaacagtgagcggccatgtagagctggc 566 Query: 120 tcagcgtacgtactcctctctctctcccatggagaacataacggaggatttattcatgta 179 ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 565 tcagcgtacgtcctcccctctctctcccatggagatcataacagaggatttattcatgta 506 Query: 180 tatgtatatat 190 ||||||||||| Sbjct: 505 tatgtatatat 495
>emb|Z37114.1|HVLTPPA H.vulgare (clone pKG2316) mRNA for lipid transfer protein precursor Length = 627 Score = 299 bits (151), Expect = 2e-78 Identities = 183/191 (95%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 1 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaa-gggagtgaa 59 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 613 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctccttaaagggagtgaa 554 Query: 60 caaacaatcaaacactgatacaaaaaccgatacaacagtgagcggccaagtagagctggc 119 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 553 caaacaatcaaacactgatacaaaa-ccgatacaacagtgagcggccatgtagagctggc 495 Query: 120 tcagcgtacgtactcctctctctctcccatggagaacataacggaggatttattcatgta 179 ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 494 tcagcgtacgtcctcccctctctctcccatggagatcataacagaggatttattcatgta 435 Query: 180 tatgtatatat 190 ||||||||||| Sbjct: 434 tatgtatatat 424
>emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA Length = 724 Score = 291 bits (147), Expect = 4e-76 Identities = 183/191 (95%), Gaps = 3/191 (1%) Strand = Plus / Minus Query: 1 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctc-aagggagtgaa 59 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 668 taagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaaagggagtgaa 609 Query: 60 caaacaatcaaacactgatacaaaaaccgatacaacagtgagcggccaagtagagctggc 119 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 608 caaacaatcaaacactgatac-aaaaccgatacaacagtgagcggccatgtagagctggc 550 Query: 120 tcagcgtacgtactcctctctctctcccatggagaacataacggaggatttattcatgta 179 ||||||||||| |||| ||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 549 tcagcgtacgtcctcc-ctctctctctcatggagatcataacagaggatttattcatgta 491 Query: 180 tatgtatatat 190 ||||||||||| Sbjct: 490 tatgtatatat 480
>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA, complete cds Length = 737 Score = 107 bits (54), Expect = 1e-20 Identities = 158/188 (84%), Gaps = 6/188 (3%) Strand = Plus / Minus Query: 3 agtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaagggagtgaacaa 62 ||||| |||||||||| ||||| ||||||||||| | || ||| |||||||||||| | Sbjct: 679 agtgcacatggtacaaagtacaacaaactcccgtctctg-ctca--aagggagtgaacga 623 Query: 63 acaatcaaacactgatacaaaaaccgatacaacagtgagcggccaagtagagctggctca 122 |||||||||| ||||||| |||| |||||||||||| |||| | | ||||||||||| Sbjct: 622 acaatcaaacgctgatac-aaaatagatacaacagtggccggctatgcagagctggctcg 564 Query: 123 gcgtacgtactcctctctctctcccatggagaacataacggaggatttattcatgtatat 182 ||||||||||| || |||||| |||||||| |||| | ||| |||||||||||||||| Sbjct: 563 acgtacgtactc--ctgtctctcacatggagatcatatcagagcatttattcatgtatat 506 Query: 183 gtatatat 190 || ||||| Sbjct: 505 gtgtatat 498
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 101 bits (51), Expect = 8e-19 Identities = 121/142 (85%), Gaps = 3/142 (2%) Strand = Plus / Minus Query: 49 aagggagtgaacaaacaatcaaacactgatacaaaaaccgatacaacagtgagcggccaa 108 |||||||||||| ||||||||||| ||||||| |||| |||||||||||| |||| | Sbjct: 3432 aagggagtgaacgaacaatcaaacgctgatac-aaaatagatacaacagtggccggctat 3374 Query: 109 gtagagctggctcagcgtacgtactcctctctctctcccatggagaacataacggaggat 168 | ||||||||||| ||||||||||| || |||||| |||||||| |||| | ||| || Sbjct: 3373 gcagagctggctcgacgtacgtactc--ctgtctctcacatggagatcatatcagagcat 3316 Query: 169 ttattcatgtatatgtatatat 190 |||||||||||||||| ||||| Sbjct: 3315 ttattcatgtatatgtgtatat 3294
>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 730 Score = 85.7 bits (43), Expect = 5e-14 Identities = 119/142 (83%), Gaps = 3/142 (2%) Strand = Plus / Minus Query: 49 aagggagtgaacaaacaatcaaacactgatacaaaaaccgatacaacagtgagcggccaa 108 |||||||||||| ||||||||||| ||||||||||| |||||||||||| | || | Sbjct: 641 aagggagtgaacgaacaatcaaacgctgatacaaaata-gatacaacagtggccagctat 583 Query: 109 gtagagctggctcagcgtacgtactcctctctctctcccatggagaacataacggaggat 168 | | ||||||||| |||||||||||| |||||| | ||||||| |||| | ||| || Sbjct: 582 gcaaagctggctcgatgtacgtactcctatctctcac--atggagatcatatcagagcat 525 Query: 169 ttattcatgtatatgtatatat 190 |||||||||||||||||||||| Sbjct: 524 ttattcatgtatatgtatatat 503
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 63.9 bits (32), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 87 cgatacaacagtgagc-ggccaagtagagctggctcagcgtacgtactcctctctctctc 145 ||||||||||||| || ||||| | |||||||||||| |||||||||| ||||||||||| Sbjct: 1580 cgatacaacagtgtgccggccatgcagagctggctcaacgtacgtacttctctctctctc 1521
>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid transfer protein precursor Length = 496 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 140 tctctcccatggagaacataacggaggatttattcatgtatatgtatatat 190 |||||| |||||||| |||| | ||| |||||||||||||||||||||||| Sbjct: 494 tctctcacatggagatcatatcagagcatttattcatgtatatgtatatat 444
>emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid transfer protein precursor Length = 691 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Minus Query: 111 agagctggctcagcgtacgtactcctctctct 142 |||||||||||| |||||||||| |||||||| Sbjct: 549 agagctggctcaacgtacgtacttctctctct 518
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gatttattcatgtatatgtatat 188 ||||||||||||||||||||||| Sbjct: 121819 gatttattcatgtatatgtatat 121841
>gb|AC147480.13| Mus musculus chromosome 14, clone RP23-429N24, complete sequence Length = 210000 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Minus Query: 165 ggatttattcatgtatatgtatatat 190 |||||||||||| ||||||||||||| Sbjct: 64237 ggatttattcatatatatgtatatat 64212
>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence Length = 215802 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 ggatttattcatgtatatgtatatat 190 |||||||||||| ||||||||||||| Sbjct: 21318 ggatttattcatatatatgtatatat 21343
>gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome 14, complete sequence Length = 215949 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Minus Query: 165 ggatttattcatgtatatgtatatat 190 |||||||||||| ||||||||||||| Sbjct: 77667 ggatttattcatatatatgtatatat 77642
>emb|AJ784903.1| Triticum turgidum subsp. durum partial mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 604 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 cgtacgtactcctctctctctc 145 |||||||||||||||||||||| Sbjct: 472 cgtacgtactcctctctctctc 451 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 catggtacaacgtacagcaaactc 32 |||||||||| ||||||||||||| Sbjct: 560 catggtacaaagtacagcaaactc 537
>emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 708 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 cgtacgtactcctctctctctc 145 |||||||||||||||||||||| Sbjct: 575 cgtacgtactcctctctctctc 554 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 catggtacaacgtacagcaaactc 32 |||||||||| ||||||||||||| Sbjct: 663 catggtacaaagtacagcaaactc 640
>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence Length = 186607 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 55737 tattcatgtatatgtatatat 55757
>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence Length = 171004 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 12442 tattcatgtatatgtatatat 12422
>gb|AC122926.2| Mus musculus BAC clone RP23-10E15 from 6, complete sequence Length = 193055 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 137376 tattcatgtatatgtatatat 137356
>emb|AL157886.13| Human DNA sequence from clone RP11-59M22 on chromosome 9q21.31-21.33, complete sequence Length = 156956 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 121186 tattcatgtatatgtatatat 121206
>gb|AC161196.4| Mus musculus chromosome 15, clone RP23-319G15, complete sequence Length = 177873 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 165399 tattcatgtatatgtatatat 165379
>gb|AC161928.4| Mus musculus chromosome 1, clone RP23-293P15, complete sequence Length = 202671 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 61180 tattcatgtatatgtatatat 61200
>gb|AC100271.6| Mus musculus, clone RP23-77E14, complete sequence Length = 210574 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 15138 tattcatgtatatgtatatat 15158
>dbj|AK095100.1| Homo sapiens cDNA FLJ37781 fis, clone BRHIP2027054 Length = 2772 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 1813 tattcatgtatatgtatatat 1833
>gb|AC092834.3| Homo sapiens BAC clone RP13-497K6 from 4, complete sequence Length = 146708 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 102462 tattcatgtatatgtatatat 102442
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 181487 tattcatgtatatgtatatat 181507
>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the complete sequence Length = 224529 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatatat 190 ||||||||||||||||||||| Sbjct: 17761 tattcatgtatatgtatatat 17781
>gb|AC165337.2| Mus musculus BAC clone RP24-356N8 from chromosome 12, complete sequence Length = 155881 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtat 186 |||||||||||||||||||| Sbjct: 118842 atttattcatgtatatgtat 118823
>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence Length = 189145 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 151302 atttatttatgtatatgtatatat 151325
>ref|XM_715692.1| Candida albicans SC5314 retrotransposon Tca2 polyprotein (CaO19_13809), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 1888 aatcaaacactgatacaaaa 1907
>ref|XM_707589.1| Candida albicans SC5314 retrotransposon Tca2 polyprotein (CaO19.9908), mRNA Length = 4701 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 4663 aatcaaacactgatacaaaa 4682
>ref|XM_707569.1| Candida albicans SC5314 retrotransposon Tca2 polyprotein (CaO19.2372), mRNA Length = 4701 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 4663 aatcaaacactgatacaaaa 4682
>gb|AC157088.2| Pan troglodytes BAC clone CH251-497H13 from chromosome unknown, complete sequence Length = 220527 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168742 tattcatgtatatgtatata 168761 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168718 tattcatgtatatgtatata 168737 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168694 tattcatgtatatgtatata 168713 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168670 tattcatgtatatgtatata 168689 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168646 tattcatgtatatgtatata 168665 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 168622 tattcatgtatatgtatata 168641
>gb|AC131920.7| Mus musculus chromosome 14, clone RP23-450N9, complete sequence Length = 201436 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtata 187 |||||||||||||||||||| Sbjct: 56900 tttattcatgtatatgtata 56881
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtat 186 |||||||||||||||||||| Sbjct: 95900 atttattcatgtatatgtat 95881
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 |||||||||| ||||||||||||| Sbjct: 183689 atttattcatatatatgtatatat 183666
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatatat 190 |||||||||||||||||||| Sbjct: 21903 attcatgtatatgtatatat 21884
>ref|XM_883783.1| Candida albicans SC5314 hypothetical protein (CaJ7.0300) partial mRNA Length = 4701 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 4663 aatcaaacactgatacaaaa 4682
>ref|XM_716201.1| Candida albicans SC5314 retrotransposon Tca2 polyprotein (POL97) partial mRNA Length = 1926 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 1888 aatcaaacactgatacaaaa 1907
>ref|XM_705023.1| Candida albicans SC5314 retrotransposon Tca2 polyprotein (POL98) partial mRNA Length = 4701 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 4663 aatcaaacactgatacaaaa 4682
>gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complete sequence Length = 104955 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttattcatgtatatgtatat 188 |||||||||||||||||||| Sbjct: 92865 ttattcatgtatatgtatat 92846
>gb|AC117667.9| Mus musculus chromosome 6, clone RP23-367C6, complete sequence Length = 134538 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtata 187 |||||||||||||||||||| Sbjct: 6904 tttattcatgtatatgtata 6885
>emb|AL357374.11| Human DNA sequence from clone RP11-353C18 on chromosome 20 Contains the 5' end of the NFS1 gene for nitrogen fixation 1 (S. cerevisiae), the C20orf52 gene, the RNPC2 gene for RNA-binding region (RNP1, RRM) containing 2, a BXDC1 pseudogene, the 5' end of the C20orf104 gene and three CpG islands, complete sequence Length = 80565 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 62501 tattcatgtatatgtatata 62482 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 62461 tattcatgtatatgtatata 62442 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 62517 tattcatgtatatgtatat 62499 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 62477 tattcatgtatatgtatat 62459
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 225052 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatatat 190 |||||||||||||||| ||||||| Sbjct: 192322 atttattcatgtatatatatatat 192345
>gb|AC175700.2| Tupaia belangeri, clone XX-828E7, complete sequence Length = 38645 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatatc 191 |||||||||||||||||||| Sbjct: 17843 ttcatgtatatgtatatatc 17862
>emb|Z66529.1|HVGLTP4X9 H.vulgare Ltp4.2 gene Length = 1567 Score = 40.1 bits (20), Expect = 2.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 102 cggccaagtagagctggctcagcgtacgtactcctctctctctc 145 |||||| | ||| |||||||| | |||| ||||||||||||||| Sbjct: 1165 cggccatgcagaactggctcaacatacgcactcctctctctctc 1122
>emb|X77291.1|SCIILDNA S.cerevisiae YBL0421, YBL0438, YBL0418, YBL0422, YBL0423, YBL0426, YBL0425, YBL0424, and YBL0437 genes Length = 18100 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtat 186 |||||||||||||||||||| Sbjct: 16389 atttattcatgtatatgtat 16370
>emb|CR536621.7| Zebrafish DNA sequence from clone CH211-158M1, complete sequence Length = 155945 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 76829 atttatttatgtatatgtatatat 76806
>gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, complete sequence Length = 188609 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 141712 atttatttatgtatatgtatatat 141689
>gb|AC105392.1| Homo sapiens BAC clone RP11-314N14 from 4, complete sequence Length = 24023 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttattcatgtatatgtatat 188 |||||||||||||||||||| Sbjct: 964 ttattcatgtatatgtatat 983
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence Length = 193100 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttattcatgtatatgtatat 188 |||||||||||||||||||| Sbjct: 192064 ttattcatgtatatgtatat 192083
>gb|AY275833.1| Homo sapiens polymerase (DNA directed), alpha (POLA) gene, complete cds Length = 304837 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 98025 atttatttatgtatatgtatatat 98048
>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete sequence Length = 230839 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 206854 tattcatgtatatgtatata 206835
>gb|AF007776.1| Candida albicans retrotransposon pCal, complete sequence Length = 6426 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 6065 aatcaaacactgatacaaaa 6084
>gb|AC127223.5| Mus musculus BAC clone RP24-484M18 from chromosome 7, complete sequence Length = 168323 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 |||||||||| ||||||||||||| Sbjct: 33075 atttattcatatatatgtatatat 33052
>gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete sequence Length = 95175 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatatc 191 |||||||||||||||||||| Sbjct: 61835 ttcatgtatatgtatatatc 61854
>gb|AC154346.3| Mus musculus BAC clone RP24-503E4 from chromosome 17, complete sequence Length = 167603 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 9186 tattcatgtatatgtatata 9167
>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208007 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatata 189 |||||||||||||||||||| Sbjct: 133392 tattcatgtatatgtatata 133373
>gb|AC154609.2| Mus musculus BAC clone RP23-334N13 from 16, complete sequence Length = 202556 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tcctctctctctcccatgga 152 |||||||||||||||||||| Sbjct: 187847 tcctctctctctcccatgga 187866
>emb|Z35793.1|SCYBL032W S.cerevisiae chromosome II reading frame ORF YBL032w Length = 2005 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtat 186 |||||||||||||||||||| Sbjct: 1764 atttattcatgtatatgtat 1783
>emb|Z35792.1|SCYBL031W S.cerevisiae chromosome II reading frame ORF YBL031w Length = 1717 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtat 186 |||||||||||||||||||| Sbjct: 131 atttattcatgtatatgtat 150
>dbj|AP001351.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2383M3, complete sequence Length = 90738 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatatat 190 |||||||||||||||| ||||||| Sbjct: 14861 atttattcatgtatatatatatat 14884
>gb|AC119962.25| Mus musculus chromosome 14, clone RP24-468L11, complete sequence Length = 141600 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 |||||||||| ||||||||||||| Sbjct: 56915 atttattcatatatatgtatatat 56892
>emb|CR550307.8| Zebrafish DNA sequence from clone DKEY-174E10 in linkage group 11, complete sequence Length = 178645 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 39248 atttatttatgtatatgtatatat 39271
>gb|AF050215.1|AF050215 Candida albicans Tca2 retrotransposon gag polyprotein (gag) and pol polyprotein (pol) genes, complete cds Length = 6980 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 6271 aatcaaacactgatacaaaa 6290
>emb|AJ251464.1|CAL251464 Candida albicans eng1 gene for endo-1,3-beta-glucanase and pCa1 retrotransposon Length = 4872 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 4802 aatcaaacactgatacaaaa 4783
>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence Length = 184937 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 |||||||||| ||||||||||||| Sbjct: 116746 atttattcatatatatgtatatat 116723
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aatcaaacactgatacaaaa 84 |||||||||||||||||||| Sbjct: 554290 aatcaaacactgatacaaaa 554271
>gb|U63993.1|HVU63993 Hordeum vulgare lipid transfer protein (blt4.9) gene, complete cds Length = 3238 Score = 40.1 bits (20), Expect = 2.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 102 cggccaagtagagctggctcagcgtacgtactcctctctctctc 145 |||||| | ||| |||||||| | |||| ||||||||||||||| Sbjct: 2561 cggccatgcagaactggctcaacatacgcactcctctctctctc 2518
>gb|AC079375.24| Homo sapiens X BAC RP11-757E1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172649 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatatat 190 ||||||| |||||||||||||||| Sbjct: 110924 atttatttatgtatatgtatatat 110901
>gb|AY502057.1| Mumps virus strain Lit-1023 HN protein gene, partial cds Length = 1746 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 caaacaatcaaacactgat 78 ||||||||||||||||||| Sbjct: 1193 caaacaatcaaacactgat 1211
>gb|AC160972.4| Mus musculus BAC clone RP24-571D21 from chromosome 12, complete sequence Length = 184921 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 115935 attcatgtatatgtatata 115917
>gb|AC101743.5| Mus musculus chromosome 1, clone RP23-278E1, complete sequence Length = 182942 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 ttattcatgtatatgtata 187 ||||||||||||||||||| Sbjct: 76385 ttattcatgtatatgtata 76403
>gb|AC152949.1| Mus musculus 10 BAC RP23-184H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206898 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 ||||||||||||||||| ||||| Sbjct: 128267 tttattcatgtatatgtgtatat 128289
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 169 ttattcatgtatatgtatatatc 191 |||| |||||||||||||||||| Sbjct: 76316 ttatacatgtatatgtatatatc 76338
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gatttattcatgtatatgtatat 188 |||||||| |||||||||||||| Sbjct: 177816 gatttatttatgtatatgtatat 177838
>gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock protein 86 (HSP86), O1 (o1), O3 (o3), O2 (o2), CG8 (cg8), CG4 (cg4), CG3 (cg3), putative chloroquine resistance transporter (crt), CG9 (cg9), CG1 (cg1), CG6 (cg6), CG2 (cg2), and CG7 (cg7) genes, complete cds Length = 47573 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 ||||||| ||||||||||||||| Sbjct: 22055 atttatttatgtatatgtatata 22033
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 agcgtacgtactcctctct 140 ||||||||||||||||||| Sbjct: 81187 agcgtacgtactcctctct 81205
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 105368 actcctctctctctcccat 105350
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 agcgtacgtactcctctct 140 ||||||||||||||||||| Sbjct: 3068 agcgtacgtactcctctct 3086
>gb|AC103371.9| Mus musculus chromosome 5, clone RP24-399A15, complete sequence Length = 122682 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||| ||||||||||||||||| Sbjct: 44649 tttatacatgtatatgtatatat 44627
>gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, complete sequence Length = 173877 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 ||||||||| ||||||||||||| Sbjct: 91848 tttattcatatatatgtatatat 91870
>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence Length = 209896 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 70210 ttcatgtatatgtatatat 70228
>gb|AC101651.6| Mus musculus chromosome 18, clone RP23-42D12, complete sequence Length = 198070 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 76045 ttcatgtatatgtatatat 76027
>gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, complete sequence Length = 187162 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 45943 ttcatgtatatgtatatat 45925
>gb|U67065.1|MMU67065 Mus musculus butyrophilin (Btn1a1) gene, promoter region and complete cds Length = 14180 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 6806 ttcatgtatatgtatatat 6788
>gb|AC125131.4| Mus musculus BAC clone RP24-310B22 from chromosome 5, complete sequence Length = 155744 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 31964 ttcatgtatatgtatatat 31946
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence Length = 171061 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatata 189 ||||||| ||||||||||||||| Sbjct: 108368 atttatttatgtatatgtatata 108390
>gb|AC117740.12| Mus musculus chromosome 8, clone RP24-134P12, complete sequence Length = 186401 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 agtgaacaaacaatcaaacactg 76 ||||||||||||| ||||||||| Sbjct: 138890 agtgaacaaacaaacaaacactg 138912
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 172081 ttcatgtatatgtatatat 172063
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 20026645 actcctctctctctcccat 20026663
>gb|AC142257.4| Mus musculus BAC clone RP24-511I4 from chromosome 18, complete sequence Length = 140990 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 132033 ttcatgtatatgtatatat 132015
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 |||||| |||||||||||||||| Sbjct: 195066 tttatttatgtatatgtatatat 195088
>gb|AC124555.4| Mus musculus BAC clone RP23-245K17 from chromosome 14, complete sequence Length = 210174 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 gtgaacaaacaatcaaaca 73 ||||||||||||||||||| Sbjct: 126491 gtgaacaaacaatcaaaca 126473
>gb|AC099511.5| Homo sapiens chromosome 16 clone RP11-293N14, complete sequence Length = 173627 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 171272 ttcatgtatatgtatatat 171290
>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete sequence Length = 182619 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||||||| ||||||||||||| Sbjct: 111673 tttattcatatatatgtatatat 111651
>gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 11 of 11 of the complete sequence Length = 249198 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 19984 attcatgtatatgtatata 19966
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 139045 ttcatgtatatgtatatat 139063
>gb|AC122837.4| Mus musculus BAC clone RP23-189N3 from 16, complete sequence Length = 199988 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 164 aggatttattcatgtatat 182 ||||||||||||||||||| Sbjct: 170102 aggatttattcatgtatat 170084 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatata 189 |||||||||||||||| |||||| Sbjct: 49372 atttattcatgtatatttatata 49394
>gb|AC122915.2| Mus musculus BAC clone RP23-27G7 from 5, complete sequence Length = 220145 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 173 tcatgtatatgtatatatc 191 ||||||||||||||||||| Sbjct: 39216 tcatgtatatgtatatatc 39198
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 133 tcctctctctctcccatgg 151 ||||||||||||||||||| Sbjct: 187734 tcctctctctctcccatgg 187752
>emb|AL731892.6| Human DNA sequence from clone RP11-346M5 on chromosome 1 Contains the 5' end of a cytochrome P450 4Z1 (CYP4Z1) pseudogene, a tubulin alpha pseudogene, the CYP4A11 gene for cytochrome P450 family 4 subfamily A polypeptide 11, complete sequence Length = 123921 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ctcctcaagggagtgaaca 61 ||||||||||||||||||| Sbjct: 15168 ctcctcaagggagtgaaca 15186
>emb|AL159982.17| Human DNA sequence from clone RP11-94P17 on chromosome 13 Contains the 3' end of a novel gene (FLJ25324) and a novel gene, complete sequence Length = 162414 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 70232 attcatgtatatgtatata 70214
>emb|AL160392.12| Human DNA sequence from clone RP11-121N13 on chromosome 13 Contains the 5' end of the DCAMKL1 gene for doublecortin and CaM kinase-like 1 (DCLK KIAA0369), a novel gene and two CpG islands, complete sequence Length = 106585 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 19472 ttcatgtatatgtatatat 19490
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 tcctctctctctcccatggagaa 155 ||||||| ||||||||||||||| Sbjct: 168808 tcctctcactctcccatggagaa 168786
>emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J12 on chromosome 6q16.1-16.3 Contains the 5' end of the MAP3K7 gene for mitogen-activated protein kinase kinase kinase 7 (TGF-beta activated kinase 1, TAK1) and two CpG islands, complete sequence Length = 86398 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 aacaaacaatcaaacactg 76 ||||||||||||||||||| Sbjct: 22526 aacaaacaatcaaacactg 22544
>emb|AL109660.14|HSJ666F24 Human DNA sequence from clone RP4-666F24 on chromosome 1p13.1-13.3 Contains the TSHB gene for thyroid stimulating hormone (beta), the gene for tetraspan 2 (TSPAN-2), a novel gene and one CpG island, complete sequence Length = 139563 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 tctctctcccatggagaac 156 ||||||||||||||||||| Sbjct: 47159 tctctctcccatggagaac 47141
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 caagtagagctggctcagc 124 ||||||||||||||||||| Sbjct: 75661 caagtagagctggctcagc 75643
>gb|AC010053.7| Drosophila melanogaster 3L BAC RP98-6H19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 128765 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 53970 tattcatgtatatgtatat 53988
>emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chromosome 11 Contains the Foxi1 gene for forkhead box I1 and the 3' end of the Dock2 gene for dedicator of cyto-kinesis 2, complete sequence Length = 203257 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 166 gatttattcatgtatatgtatat 188 ||||||| ||||||||||||||| Sbjct: 122273 gatttatgcatgtatatgtatat 122251
>gb|AC162913.3| Mus musculus BAC clone RP24-409P22 from chromosome 3, complete sequence Length = 175922 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 94439 ttcatgtatatgtatatat 94421
>emb|CR753867.11| Zebrafish DNA sequence from clone DKEY-165I4 in linkage group 5, complete sequence Length = 125222 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 72054 attcatgtatatgtatata 72072
>emb|AL714025.12| Mouse DNA sequence from clone RP23-16H24 on chromosome 13 Contains the Abt1 gene for activator of basal transcription, a novel gene, the Btn1a1 gene for butyrophilin 1A1, the gene for a novel butyrophilin subfamily 2 (Btn2) member and three CpG islands, complete sequence Length = 121496 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 67222 ttcatgtatatgtatatat 67240
>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the gene for the ortholog of rat and human ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a novel gene and a CpG island, complete sequence Length = 194065 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||| ||||||||||||||||| Sbjct: 16788 tttatacatgtatatgtatatat 16766
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence Length = 163949 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 47139 atttattcatttatatgtatata 47117
>gb|AC011463.7| Homo sapiens chromosome 19 clone CTC-442E9, complete sequence Length = 101944 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 18486 ttcatgtatatgtatatat 18468
>emb|AL627411.21| Mouse DNA sequence from clone RP23-346H6 on chromosome X, complete sequence Length = 185184 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 128390 ttcatgtatatgtatatat 128408
>gb|AC010033.8| Drosophila melanogaster 3L BAC RP98-3I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 188653 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 180457 tattcatgtatatgtatat 180475
>gb|AC069444.17| Homo sapiens 3 BAC RP11-169N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165093 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 gaacaaacaatcaaacact 75 ||||||||||||||||||| Sbjct: 33620 gaacaaacaatcaaacact 33638
>ref|NM_168470.1| Drosophila melanogaster CG32085-RA (CG32085), mRNA Length = 3043 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 2914 tattcatgtatatgtatat 2896
>gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, complete sequence Length = 192573 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 |||||| |||||||||||||||| Sbjct: 154002 tttatttatgtatatgtatatat 154024
>gb|AY089649.1| Drosophila melanogaster RH06780 full insert cDNA Length = 3043 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 2915 tattcatgtatatgtatat 2897
>gb|AC053544.5| Homo sapiens BAC clone RP11-793B9 from 4, complete sequence Length = 187332 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||||||||||| ||||||||| Sbjct: 169831 tttattcatgtatgtgtatatat 169809
>gb|AC096858.3| Homo sapiens BAC clone RP11-234I24 from 4, complete sequence Length = 17316 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 aagggagtgaacaaacaat 67 ||||||||||||||||||| Sbjct: 10516 aagggagtgaacaaacaat 10498
>ref|NM_005725.3| Homo sapiens tetraspanin 2 (TSPAN2), mRNA Length = 3207 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 138 tctctctcccatggagaac 156 ||||||||||||||||||| Sbjct: 2284 tctctctcccatggagaac 2302
>gb|AC023943.6| Homo sapiens chromosome , clone RP11-1G18, complete sequence Length = 153061 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 ||||||||||||||| ||||||| Sbjct: 115910 tttattcatgtatatatatatat 115932
>gb|AC182808.1| Gasterosteus aculeatus clone VMRC28-105K03, complete sequence Length = 124886 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 ||||| ||||||||||||||||| Sbjct: 25578 tttatgcatgtatatgtatatat 25600
>gb|AC011373.4| Homo sapiens chromosome 5 clone CTB-108O6, complete sequence Length = 199316 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 41295 ttcatgtatatgtatatat 41277
>gb|AC025169.5| Homo sapiens chromosome 5 clone CTC-352M6, complete sequence Length = 161920 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 85021 ttcatgtatatgtatatat 85003
>gb|AC010461.7| Homo sapiens chromosome 5 clone CTD-2275A5, complete sequence Length = 109588 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 58758 ttcatgtatatgtatatat 58740
>dbj|AK040245.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430080F22 product:unclassifiable, full insert sequence Length = 1269 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 903 attcatgtatatgtatata 885
>dbj|AK049500.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430017L17 product:MAP/microtubule affinity-regulating kinase 3, full insert sequence Length = 4155 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 attcatgtatatgtatata 189 ||||||||||||||||||| Sbjct: 3816 attcatgtatatgtatata 3798
>dbj|AK037546.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130024N08 product:unclassifiable, full insert sequence Length = 3225 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gatttattcatgtatatgtatat 188 ||||||| ||||||||||||||| Sbjct: 1067 gatttatgcatgtatatgtatat 1089
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 146288 ttcatgtatatgtatatat 146306
>ref|XM_394765.2| PREDICTED: Apis mellifera similar to ENSANGP00000023327 (LOC411291), mRNA Length = 1543 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 1331 ttcatgtatatgtatatat 1313
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ctcctctctctctcccatg 150 ||||||||||||||||||| Sbjct: 7728483 ctcctctctctctcccatg 7728501
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 agcgtacgtactcctctct 140 ||||||||||||||||||| Sbjct: 28276386 agcgtacgtactcctctct 28276404
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 11135084 atttattcatatatatgtatata 11135106
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 14572145 atttattcatatatatgtatata 14572123
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 20019673 actcctctctctctcccat 20019691
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 7224970 actcctctctctctcccat 7224952
>gb|AC112700.4| Homo sapiens BAC clone RP11-1377I19 from 2, complete sequence Length = 46732 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 gtactcctctctctctccc 147 ||||||||||||||||||| Sbjct: 31813 gtactcctctctctctccc 31831
>gb|AC092379.4| Homo sapiens chromosome 16 clone RP11-707E24, complete sequence Length = 182300 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 60856 ttcatgtatatgtatatat 60874
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence Length = 182948 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 aaacactgatacaaaaacc 87 ||||||||||||||||||| Sbjct: 60645 aaacactgatacaaaaacc 60627
>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence Length = 221109 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 tcctctctctctcccatgg 151 ||||||||||||||||||| Sbjct: 216430 tcctctctctctcccatgg 216412
>emb|BX682533.6| Mouse DNA sequence from clone RP23-108L1 on chromosome 4, complete sequence Length = 160792 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tgaacaaacaatcaaacac 74 ||||||||||||||||||| Sbjct: 130860 tgaacaaacaatcaaacac 130842
>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence Length = 174927 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 165186 ttcatgtatatgtatatat 165204
>gb|AC117792.6| Mus musculus chromosome 8, clone RP24-549A13, complete sequence Length = 174210 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 agtgaacaaacaatcaaacactg 76 ||||||||||||| ||||||||| Sbjct: 45904 agtgaacaaacaaacaaacactg 45926
>gb|AC116015.16| Homo sapiens chromosome 11, clone RP11-356D19, complete sequence Length = 180634 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||||||||||||| ||||||| Sbjct: 90057 tttattcatgtatatatatatat 90035
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 93891 atttattcatatatatgtatata 93913
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 124907 actcctctctctctcccat 124889
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 actcctctctctctcccat 149 ||||||||||||||||||| Sbjct: 778 actcctctctctctcccat 760
>emb|BX537113.8| Zebrafish DNA sequence from clone CH211-207G17 in linkage group 16, complete sequence Length = 218597 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 61 aaacaatcaaacactgatacaaa 83 |||||||||||||| |||||||| Sbjct: 113026 aaacaatcaaacacggatacaaa 113004
>emb|AL929536.7| Zebrafish DNA sequence from clone CH211-158E23, complete sequence Length = 151341 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 gtgaacaaacaatcaaaca 73 ||||||||||||||||||| Sbjct: 23103 gtgaacaaacaatcaaaca 23085
>gb|AC101911.9| Mus musculus chromosome 19, clone RP24-374E20, complete sequence Length = 118431 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 |||||| |||||||||||||||| Sbjct: 88971 tttatttatgtatatgtatatat 88949
>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0474F07 Length = 136440 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 9849 atttattcatatatatgtatata 9827
>dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0002F11 Length = 135446 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 75619 atttattcatatatatgtatata 75597
>emb|AL928556.7| Zebrafish DNA sequence from clone DKEY-63M7, complete sequence Length = 196404 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 3339 ttcatgtatatgtatatat 3321
>emb|AL132904.5|CEY111B2A Caenorhabditis elegans YAC Y111B2A, complete sequence Length = 257705 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 168 tttattcatgtatatgtatatat 190 ||||||||||||||| ||||||| Sbjct: 76374 tttattcatgtatatatatatat 76396
>emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on chromosome 12, complete sequence Length = 205340 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 173 tcatgtatatgtatatatc 191 ||||||||||||||||||| Sbjct: 13021 tcatgtatatgtatatatc 13003
>emb|CR762224.2| Xenopus tropicalis finished cDNA, clone TGas104a07 Length = 1587 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 acactgatacaaaaaccga 89 ||||||||||||||||||| Sbjct: 263 acactgatacaaaaaccga 281
>gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41 of 83 of the complete sequence Length = 280378 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 tattcatgtatatgtatat 188 ||||||||||||||||||| Sbjct: 198905 tattcatgtatatgtatat 198923
>gb|AC131991.8| Mus musculus chromosome 12, clone RP24-190H17, complete sequence Length = 148426 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 173 tcatgtatatgtatatatc 191 ||||||||||||||||||| Sbjct: 98048 tcatgtatatgtatatatc 98030
>gb|AC005828.1|AC005828 Homo sapiens chromosome 17, clone hRPK.269_G_24, complete sequence Length = 163685 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 93 aacagtgagcggccaagtagagctggc 119 ||||| ||| ||||||||||||||||| Sbjct: 65704 aacagggagaggccaagtagagctggc 65730
>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete sequence Length = 218673 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ttcatgtatatgtatatat 190 ||||||||||||||||||| Sbjct: 39136 ttcatgtatatgtatatat 39118
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 agcgtacgtactcctctct 140 ||||||||||||||||||| Sbjct: 28260964 agcgtacgtactcctctct 28260982
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ctcctctctctctcccatg 150 ||||||||||||||||||| Sbjct: 7728364 ctcctctctctctcccatg 7728382
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ctcctctctctctcccatg 150 ||||||||||||||||||| Sbjct: 115876 ctcctctctctctcccatg 115894
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ctcctctctctctcccatg 150 ||||||||||||||||||| Sbjct: 27474 ctcctctctctctcccatg 27492
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence Length = 169780 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 126535 atttattcatttatatgtatata 126513
>gb|AC138718.3| Mus musculus BAC clone RP23-221F8 from 14, complete sequence Length = 238536 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 gtgaacaaacaatcaaaca 73 ||||||||||||||||||| Sbjct: 1492 gtgaacaaacaatcaaaca 1510
>gb|AC132609.3| Mus musculus BAC clone RP23-351O8 from 12, complete sequence Length = 200045 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gatttattcatgtatatgtatat 188 |||||||| |||||||||||||| Sbjct: 31897 gatttatttatgtatatgtatat 31919
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1, complete sequence Length = 229480 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 aacaaacaatcaaacactg 76 ||||||||||||||||||| Sbjct: 224399 aacaaacaatcaaacactg 224417 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 aacaaacaatcaaacactg 76 ||||||||||||||||||| Sbjct: 204861 aacaaacaatcaaacactg 204879
>gb|AC165349.2| Mus musculus BAC clone RP23-212M22 from chromosome 12, complete sequence Length = 199483 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 167 atttattcatgtatatgtatata 189 |||||||||| |||||||||||| Sbjct: 21020 atttattcatttatatgtatata 20998
>gb|U10882.1|HIU10882 Haemophilus influenzae transferrin binding protein 2 (tbpB) gene and transferrin binding protein 1 (tbpA) gene, complete cds Length = 4927 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tacaaaaaccgatacaaca 96 ||||||||||||||||||| Sbjct: 1182 tacaaaaaccgatacaaca 1200
>emb|AL672218.9| Mouse DNA sequence from clone RP24-BM212H6 on chromosome 11, complete sequence Length = 196938 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 168 tttattcatgtatatgtatatat 190 ||||| ||||||||||||||||| Sbjct: 17838 tttatacatgtatatgtatatat 17816
>gb|AY502062.2| Mumps virus strain KILHAM HN protein gene, partial cds Length = 1746 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 caaacaatcaaacactgat 78 ||||||||||||||||||| Sbjct: 1193 caaacaatcaaacactgat 1211
>gb|AY502060.2| Mumps virus strain Lit-957 HN protein gene, partial cds Length = 1746 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 caaacaatcaaacactgat 78 ||||||||||||||||||| Sbjct: 1193 caaacaatcaaacactgat 1211
>gb|AY502059.2| Mumps virus strain Lit-976 HN protein gene, partial cds Length = 1746 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 caaacaatcaaacactgat 78 ||||||||||||||||||| Sbjct: 1193 caaacaatcaaacactgat 1211
>gb|AY502058.2| Mumps virus strain Lit-1013 HN protein gene, partial cds Length = 1746 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 caaacaatcaaacactgat 78 ||||||||||||||||||| Sbjct: 1193 caaacaatcaaacactgat 1211
>emb|AL772174.11| Mouse DNA sequence from clone RP23-215D22 on chromosome 4, complete sequence Length = 178996 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 tctctctcccatggagaac 156 ||||||||||||||||||| Sbjct: 115901 tctctctcccatggagaac 115883 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,678,849 Number of Sequences: 3902068 Number of extensions: 6678849 Number of successful extensions: 515452 Number of sequences better than 10.0: 180 Number of HSP's better than 10.0 without gapping: 180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 511951 Number of HSP's gapped (non-prelim): 3487 length of query: 191 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 169 effective length of database: 17,147,199,772 effective search space: 2897876761468 effective search space used: 2897876761468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
