>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 91/104 (87%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                           
Query: 223     tcaatcaccttcccgttctcctgtccttttcccggtctctgctgctcctatcgtggtgat 282
               |||||||||||||| ||||||||||||| |||| ||||||||| ||   ||| | |||||
Sbjct: 4448177 tcaatcaccttccctttctcctgtccttctccctgtctctgcttct---atcatagtgat 4448121

                                                           
Query: 283     catccttccctcggcctgagcttttttcacgtgccctgtctctc 326
               ||||| ||||||||| || ||||||||||||| |||||||||||
Sbjct: 4448120 catccctccctcggcttgcgcttttttcacgtaccctgtctctc 4448077



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Minus

                                                                           
Query: 352     ctctgctgcgactgtactctctatctctatccagtgatgacttccttgaaggactacggc 411
               ||||| ||||| ||| ||||| |||||| |||||||||    |||||| |||||||||||
Sbjct: 4448039 ctctgttgcgattgtgctctcgatctctttccagtgatc---tccttggaggactacggc 4447983

                      
Query: 412     tcctgct 418
               |||||||
Sbjct: 4447982 tcctgct 4447976



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 531     aaaccatgatcagattgaaggcgcctacggtggctggc 568
               |||||||  ||||| ||||| |||||||||||||||||
Sbjct: 4447682 aaaccatattcagactgaagacgcctacggtggctggc 4447645

>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544B02
          Length = 156339

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 91/104 (87%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                          
Query: 223    tcaatcaccttcccgttctcctgtccttttcccggtctctgctgctcctatcgtggtgat 282
              |||||||||||||| ||||||||||||| |||| ||||||||| ||   ||| | |||||
Sbjct: 131741 tcaatcaccttccctttctcctgtccttctccctgtctctgcttct---atcatagtgat 131685

                                                          
Query: 283    catccttccctcggcctgagcttttttcacgtgccctgtctctc 326
              ||||| ||||||||| || ||||||||||||| |||||||||||
Sbjct: 131684 catccctccctcggcttgcgcttttttcacgtaccctgtctctc 131641



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Minus

                                                                          
Query: 352    ctctgctgcgactgtactctctatctctatccagtgatgacttccttgaaggactacggc 411
              ||||| ||||| ||| ||||| |||||| |||||||||    |||||| |||||||||||
Sbjct: 131603 ctctgttgcgattgtgctctcgatctctttccagtgatc---tccttggaggactacggc 131547

                     
Query: 412    tcctgct 418
              |||||||
Sbjct: 131546 tcctgct 131540



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 531    aaaccatgatcagattgaaggcgcctacggtggctggc 568
              |||||||  ||||| ||||| |||||||||||||||||
Sbjct: 131246 aaaccatattcagactgaagacgcctacggtggctggc 131209

>dbj|AK067511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H05, full
            insert sequence
          Length = 3871

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 91/104 (87%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaatcaccttcccgttctcctgtccttttcccggtctctgctgctcctatcgtggtgat 282
            |||||||||||||| ||||||||||||| |||| ||||||||| ||   ||| | |||||
Sbjct: 3508 tcaatcaccttccctttctcctgtccttctccctgtctctgcttct---atcatagtgat 3452

                                                        
Query: 283  catccttccctcggcctgagcttttttcacgtgccctgtctctc 326
            ||||| ||||||||| || ||||||||||||| |||||||||||
Sbjct: 3451 catccctccctcggcttgcgcttttttcacgtaccctgtctctc 3408



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Minus

                                                                        
Query: 352  ctctgctgcgactgtactctctatctctatccagtgatgacttccttgaaggactacggc 411
            ||||| ||||| ||| ||||| |||||| |||||||||    |||||| |||||||||||
Sbjct: 3370 ctctgttgcgattgtgctctcgatctctttccagtgatc---tccttggaggactacggc 3314

                   
Query: 412  tcctgct 418
            |||||||
Sbjct: 3313 tcctgct 3307



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 69/83 (83%), Gaps = 3/83 (3%)
 Strand = Plus / Minus

                                                                        
Query: 489  ctctcagaagaccgtctgttgtttgcaccgtctattgaa---gacaaaccatgatcagat 545
            ||||||||||| || ||| |||||||||| ||  |||||   || |||||||  ||||| 
Sbjct: 3245 ctctcagaagagcgcctgctgtttgcaccatcatttgaaaatgataaaccatattcagac 3186

                                   
Query: 546  tgaaggcgcctacggtggctggc 568
            ||||| |||||||||||||||||
Sbjct: 3185 tgaagacgcctacggtggctggc 3163

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 288   ttccctcggcctgagcttttttcacg 313
             |||||||||| |||||||||||||||
Sbjct: 94797 ttccctcggcttgagcttttttcacg 94822

>dbj|AP004952.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19C08, TM0125,
             complete sequence
          Length = 89551

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 212   cacaacaggtttcaatcacctt 233
             ||||||||||||||||||||||
Sbjct: 72094 cacaacaggtttcaatcacctt 72073

>gb|BC095586.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor), mRNA (cDNA clone
           MGC:111894 IMAGE:7407967), complete cds
          Length = 2088

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 405 ctacggctcctgcttcggctgcgag 429
           |||||||||||||| ||||||||||
Sbjct: 841 ctacggctcctgctccggctgcgag 817

>gb|BC066682.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor), mRNA (cDNA clone
           MGC:76897 IMAGE:6521231), complete cds
          Length = 2900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 405 ctacggctcctgcttcggctgcgag 429
           |||||||||||||| ||||||||||
Sbjct: 824 ctacggctcctgctccggctgcgag 800

>gb|BC056752.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing factor
            2, alternate splicing factor), mRNA (cDNA clone MGC:65898
            IMAGE:6801570), complete cds
          Length = 1860

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 405  ctacggctcctgcttcggctgcgag 429
            |||||||||||||| ||||||||||
Sbjct: 1161 ctacggctcctgctccggctgcgag 1137

>ref|NM_200593.2| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor) (sfrs1), mRNA
          Length = 2900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 405 ctacggctcctgcttcggctgcgag 429
           |||||||||||||| ||||||||||
Sbjct: 824 ctacggctcctgctccggctgcgag 800

>emb|BX248306.5| Zebrafish DNA sequence from clone CH211-230K7 in linkage group 7,
             complete sequence
          Length = 119504

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    acactgcttttgttcttgaga 56
             |||||||||||||||||||||
Sbjct: 71617 acactgcttttgttcttgaga 71597

>emb|AL929224.16| Zebrafish DNA sequence from clone CH211-232P9 in linkage group 21,
              complete sequence
          Length = 176879

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 405    ctacggctcctgcttcggctgcgag 429
              |||||||||||||| ||||||||||
Sbjct: 170697 ctacggctcctgctccggctgcgag 170721

>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   ccttgttcaggcaaatgatga 208
             |||||||||||||||||||||
Sbjct: 68389 ccttgttcaggcaaatgatga 68369

>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 188  ccttgttcaggcaaatgatga 208
            |||||||||||||||||||||
Sbjct: 1389 ccttgttcaggcaaatgatga 1409

>gb|AC116877.18| Mus musculus chromosome 18, clone RP24-429E21, complete sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    acaaaaaatagttactctat 78
             ||||||||||||||||||||
Sbjct: 76025 acaaaaaatagttactctat 76044

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     tctcccggcgtcattgccat 342
               ||||||||||||||||||||
Sbjct: 3110810 tctcccggcgtcattgccat 3110829

>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gaagacaaaccatgatcaga 544
              ||||||||||||||||||||
Sbjct: 232813 gaagacaaaccatgatcaga 232794

>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence
          Length = 173131

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   cttcccgttctcctgtcctt 250
             ||||||||||||||||||||
Sbjct: 38688 cttcccgttctcctgtcctt 38669

>gb|AE008893.1| Salmonella typhimurium LT2, section 197 of 220 of the complete genome
          Length = 20178

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 324  ctcccggcgtcattgccatgcaat 347
            |||| |||||||||||||||||||
Sbjct: 7814 ctcctggcgtcattgccatgcaat 7791

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     ttccttgcttttaacacaac 187
               ||||||||||||||||||||
Sbjct: 2864058 ttccttgcttttaacacaac 2864077

>emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 in linkage group 4
              Contains the gene for a novel protein containing two notch
              (DSL) domains and an EF hand domain, the gene for a novel
              protein similar to vertebrate myosin binding protein H
              (MYBPH), the gene for a novel protein sinilar to human and
              mouse CWF19-like 1, cell cycle control (S. pombe)
              (CWF19L1), the gene for a novel protein (zgc:55718), the
              gene for a novel protein containing Kelch motifs and a
              BTB/POZ domain, the sycp3 gene for synaptonemal complex
              protein 3, a novel gene and a CpG island, complete sequence
          Length = 166208

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tactacaataatgcacaagt 23
              ||||||||||||||||||||
Sbjct: 135655 tactacaataatgcacaagt 135674

>gb|AC163031.5| Mus musculus BAC clone RP24-146A18 from chromosome 6, complete sequence
          Length = 149473

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    caacactgcttttgttcttgagac 57
             ||||||||||||||||||| ||||
Sbjct: 38377 caacactgcttttgttcttcagac 38400

>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 15/20
          Length = 264050

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 324    ctcccggcgtcattgccatgcaat 347
              |||| |||||||||||||||||||
Sbjct: 136516 ctcctggcgtcattgccatgcaat 136539

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     ccttttcccggtctctgctg 266
               ||||||||||||||||||||
Sbjct: 1087398 ccttttcccggtctctgctg 1087379

>dbj|AK158564.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K230013P09 product:Alsin (Amyotrophic lateral
            sclerosis protein 2) homolog [Homo sapiens], full insert
            sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cttcccgttctcctgtcctt 250
            ||||||||||||||||||||
Sbjct: 1012 cttcccgttctcctgtcctt 1031

>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence
          Length = 168628

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cttcccgttctcctgtcctt 250
             ||||||||||||||||||||
Sbjct: 88861 cttcccgttctcctgtcctt 88880

>gb|DQ350726.1| Ajellomyces capsulatus nitrosative stress induced transcription 72
           (NIT72) gene, partial sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  tctatcacaatcctcaaagttgac 97
           |||||||||||| |||||||||||
Sbjct: 786 tctatcacaatcgtcaaagttgac 809

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     ggcgtcattgccatgcaatc 348
               ||||||||||||||||||||
Sbjct: 5831634 ggcgtcattgccatgcaatc 5831653

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 324     ctcccggcgtcattgccatgcaat 347
               |||| |||||||||||||||||||
Sbjct: 4124435 ctcctggcgtcattgccatgcaat 4124412

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 324     ctcccggcgtcattgccatgcaat 347
               |||| |||||||||||||||||||
Sbjct: 3586176 ctcctggcgtcattgccatgcaat 3586199

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 324     ctcccggcgtcattgccatgcaat 347
               |||| |||||||||||||||||||
Sbjct: 4285054 ctcctggcgtcattgccatgcaat 4285031

>emb|CT009725.15| Mouse DNA sequence from clone RP23-236N13 on chromosome 12, complete
            sequence
          Length = 74878

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   ctctatcacaatcctcaaag 92
            ||||||||||||||||||||
Sbjct: 8600 ctctatcacaatcctcaaag 8581

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     ggcgtcattgccatgcaatc 348
               ||||||||||||||||||||
Sbjct: 5831627 ggcgtcattgccatgcaatc 5831646

>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 169662

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ggcgtcattgccatgcaatc 348
             ||||||||||||||||||||
Sbjct: 27279 ggcgtcattgccatgcaatc 27298

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 290   ccctcggcctgagcttttttcacg 313
             |||||||| |||||||||||||||
Sbjct: 93185 ccctcggcttgagcttttttcacg 93208

>gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complete sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    gaagacaaaccatgatcaga 544
              ||||||||||||||||||||
Sbjct: 130975 gaagacaaaccatgatcaga 130994

>gb|AC140324.3| Mus musculus BAC clone RP23-402K14 from 6, complete sequence
          Length = 200190

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tatcagctgatgctgcccag 161
              ||||||||||||||||||||
Sbjct: 128112 tatcagctgatgctgcccag 128093


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,859,649
Number of Sequences: 3902068
Number of extensions: 4859649
Number of successful extensions: 94036
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93735
Number of HSP's gapped (non-prelim): 297
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)