ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbaak4n15 | 618 | AV912679 | not_full | gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 | 158 | not_full | RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 | 86 | -- | --- | - | -- | --- | - |
| rbaak4n13 | 407 | AV912678 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4n12 | 522 | AV912677 | not_full | gb|BT009335.1| Triticum aestivum clone wlm4.pk0009.a8:fis, full insert mRNA sequence Length = 1660 | 48 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4n11 | 221 | AV912676 | not_full | emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 | 356 | not_full | CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) Length = 267 | 96 | -- | --- | - | -- | --- | - |
| rbaak4n10 | 430 | AV912675 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4n09 | 200 | AV912674 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| rbaak4n08 | 527 | AV912673 | not_full | ref|XM_478258.1| Oryza sativa (japonica cultivar-group), mRNA Length = 965 | 22 | not_full | ERG1_ORYSA (Q7GC09) Elicitor-responsive protein 1 (Fungal elicitor immediate early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) Length = 159 | 8 | -- | --- | - | -- | --- | - |
| rbaak4n07 | 519 | AV912672 | not_full | ref|XM_475111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 | 58 | not_full | HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 526 | 32 | -- | --- | - | -- | --- | - |
| rbaak4n06 | 540 | AV912671 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 394 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 165 | -- | --- | - | -- | --- | - |
| rbaak4n05 | 652 | AV912670 | not_full | emb|X79466.1|HVES2A H.vulgare (Dbg 567) ES2A mRNA Length = 793 | 51 | not_full | LEA1_HORVU (P14928) ABA-inducible protein PHV A1 Length = 213 | 32 | -- | --- | - | -- | --- | - |
| rbaak4n04 | 377 | AV912669 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbaak4n03 | 277 | AV912668 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 101 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 92 | -- | --- | - | -- | --- | - |
| rbaak4n02 | 425 | AV912667 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 45 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 29 | -- | --- | - | -- | --- | - |
| rbaak4n01 | 566 | AV912666 | not_full | dbj|AK065884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043L06, full insert sequence Length = 1223 | 27 | not_full | CBBY_RHOSH (P95649) Protein cbbY Length = 230 | 70 | -- | --- | - | -- | --- | - |
| rbaak4m24 | 290 | AV912665 | not_full | gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 | 8 | not_full | COAT_TMVER (P03573) Coat protein Length = 158 | 12 | -- | --- | - | -- | --- | - |
| rbaak4m23 | 256 | AV912664 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m22 | 79 | AV832670 | not_full | gb|BT009063.1| Triticum aestivum clone wds1f.pk002.p21:fis, full insert mRNA sequence Length = 1378 | 21 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4m21 | 509 | AV912663 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 451 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 157 | -- | --- | - | -- | --- | - |
| rbaak4m20 | 66 | AV832669 | not_full | emb|X16000.1|HVGLN2 Hordeum vulgare mRNA for glutamine synthetase precursor (EC 6.3.1.2) Length = 1549 | 56 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4m19 | 494 | AV912662 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 500 | not_full | OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1) Length = 151 | 25 | -- | --- | - | -- | --- | - |
| rbaak4m18 | 509 | AV912661 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m17 | 411 | AV912660 | not_full | dbj|AK068716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C09, full insert sequence Length = 3660 | 19 | not_full | AMP1B_ARATH (Q9FV52) Methionine aminopeptidase 1B, chloroplast precursor (EC 3.4.11.18) (MetAP 1B) (MAP 1B) (Peptidase M 1B) Length = 369 | 84 | -- | --- | - | -- | --- | - |
| rbaak4m16 | 588 | AV912659 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 393 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 158 | -- | --- | - | -- | --- | - |
| rbaak4m15 | 212 | AV912658 | not_full | gb|AC150475.2| Dasypus novemcinctus clone VMRC5-254H15, complete sequence Length = 114142 | 10 | not_full | MBHS_RHOGE (P17633) Uptake hydrogenase small subunit precursor (EC 1.12.99.6) (Hydrogenlyase) (Membrane-bound hydrogenase small subunit) Length = 361 | 2 | -- | --- | - | -- | --- | - |
| rbaak4m14 | 126 | AV912657 | not_full | gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome 5, complete sequence Length = 202099 | 336 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4m13 | 601 | AV912656 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 82 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 37 | -- | --- | - | -- | --- | - |
| rbaak4m12 | 147 | AV912655 | not_full | gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence Length = 175721 | 6 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4m10 | 648 | AV912654 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m09 | 571 | AV912653 | not_full | ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 | 176 | not_full | PLPP_RAT (Q8VD52) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP phosphatase) (Reg I binding protein 1) Length = 309 | 39 | -- | --- | - | -- | --- | - |
| rbaak4m08 | 633 | AV912652 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m07 | 553 | AV912651 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m05 | 758 | AV912650 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m04 | 212 | AV912649 | not_full | emb|Z34267.1|HVBKACPS2 H.vulgare (pMaW20) pseudo mRNA for beta-ketoacyl-ACP synthase (partial) Length = 1734 | 7 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4m03 | 387 | AV912648 | not_full | gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 | 63 | not_full | OPSD_CATBO (Q17296) Rhodopsin Length = 378 | 14 | -- | --- | - | -- | --- | - |
| rbaak4m02 | 465 | AV912647 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbaak4m01 | 586 | AV912646 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4l24 | 528 | AV912645 | not_full | gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 | 92 | not_full | ATC1_DROPS (Q292Q0) Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump) Length = 1020 | 2 | -- | --- | - | -- | --- | - |
| rbaak4l23 | 547 | AV912644 | not_full | gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 | 82 | not_full | CHLP_SYNY3 (Q55087) Geranylgeranyl hydrogenase Length = 407 | 29 | -- | --- | - | -- | --- | - |
| rbaak4l22 | 584 | AV912643 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 450 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 165 | -- | --- | - | -- | --- | - |
| rbaak4l21 | 649 | AV912642 | not_full | gb|BT009315.1| Triticum aestivum clone wlm12.pk0003.g5:fis, full insert mRNA sequence Length = 1420 | 65 | not_full | CRTI_ORYSA (Q9ZTN9) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) Length = 566 | 32 | -- | --- | - | -- | --- | - |
| rbaak4l20 | 294 | AV912641 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbaak4l19 | 502 | AV912640 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4l18 | 80 | AV832668 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 7 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4l17 | 536 | AV912639 | not_full | ref|NM_194511.1| Oryza sativa (japonica cultivar-group) putative notchless protein homolog (OSJNBa0071K19.11), mRNA Length = 1344 | 43 | not_full | NLE1_BOVIN (Q58D20) Notchless homolog 1 Length = 485 | 500 | -- | --- | - | -- | --- | - |
| rbaak4l16 | 848 | AV912638 | not_full | ref|XM_475089.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 | 18 | not_full | HEXP_LEIMA (Q04832) DNA-binding protein HEXBP (Hexamer-binding protein) Length = 271 | 138 | -- | --- | - | -- | --- | - |
| rbaak4l15 | 439 | AV912637 | not_full | emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 | 494 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 117 | -- | --- | - | -- | --- | - |
| rbaak4l14 | 562 | AV912636 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 49 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 82 | -- | --- | - | -- | --- | - |
| rbaak4l13 | 616 | AV912635 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 115 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 448 | -- | --- | - | -- | --- | - |
| rbaak4l12 | 603 | AV912634 | not_full | gb|BT016875.1| Zea mays clone Contig708 mRNA sequence Length = 740 | 97 | not_full | SNF7_CANGA (Q6FW96) Vacuolar sorting protein SNF7 (Vacuolar protein sorting-associated protein VPS32) Length = 228 | 11 | -- | --- | - | -- | --- | - |
| rbaak4l11 | 714 | AV912633 | not_full | gb|AY123420.1| Triticum aestivum putative 40S ribosomal protein S3 mRNA, complete cds Length = 1004 | 362 | not_full | RS3_RAT (P62909) 40S ribosomal protein S3 Length = 243 | 285 | -- | --- | - | -- | --- | - |
