Clone Name | rbaak4n08 |
---|---|
Clone Library Name | barley_pub |
>ERG1_ORYSA (Q7GC09) Elicitor-responsive protein 1 (Fungal elicitor immediate| early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) Length = 159 Score = 37.7 bits (86), Expect = 0.020 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%) Frame = -3 Query: 522 IEVFDHDTFTKDDTMGDAEFGILDFVEIAMK----DLSHVRDDTVM--KTFHPE 379 + + DHDTF++DD +G+A + D + + M+ ++S + V+ KT+H E Sbjct: 77 LRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKTYHGE 130
>FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1| Length = 2034 Score = 32.3 bits (72), Expect = 0.82 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -3 Query: 522 IEVFDHDTFTKDDTMGDAEFGILDFVE 442 IE++D + F KD +GD E +LDF+E Sbjct: 1796 IELWDKNKFRKDRLLGDIELDLLDFIE 1822
>MERA_SHIFL (P08332) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)| Length = 564 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +1 Query: 316 ILRDLPIFPCDVAVGREAVVLFRVERLHHRVITDMAQVLHGDLDEVKDAE--LCIAHGVI 489 + R F D A+G FR+E + R T +QV + ++ V+D E L AHG + Sbjct: 298 LARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQVAY--INGVRDGEFVLTTAHGEL 355 Query: 490 LGESVMV 510 + ++V Sbjct: 356 RADKLLV 362
>FMT_BDEBA (Q6MJL7) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 318 Score = 29.3 bits (64), Expect = 7.0 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +1 Query: 250 DVNPLQVHDDLASVGVPQLQVDIL 321 D+N LQ+HD LA +G LQV+++ Sbjct: 163 DMNALQLHDVLAQLGAELLQVELM 186
>PARM_ECOLI (P11904) Plasmid segregation protein parM (Protein stbA) (ParA| locus 36 kDa protein) Length = 320 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +1 Query: 211 IWPLQIKSPHHAW---DVNPLQVHDDLASVGVPQLQVDILRDLPI 336 I P + + + AW DVN + VH L + G+P +VDI+ LP+ Sbjct: 60 ISPDAVVTTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTLPL 104
>MYOF_HUMAN (Q9NZM1) Myoferlin (Fer-1-like protein 3)| Length = 2061 Score = 29.3 bits (64), Expect = 7.0 Identities = 10/18 (55%), Positives = 16/18 (88%) Frame = -3 Query: 525 KIEVFDHDTFTKDDTMGD 472 KI V+D+DTFT+D+ +G+ Sbjct: 1619 KISVYDYDTFTRDEKVGE 1636
>PBOV1_HUMAN (Q9GZY1) Prostate and breast cancer overexpressed gene 1 protein| (Protein UROC28) (UC28) Length = 135 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +1 Query: 175 EEETLRSRKATNIWPLQIKSPHHAWDVNPLQVHDDL--ASVGVPQLQVDILRDLPIFPCD 348 +E+ RS+KAT I+ HHA + PLQ H + +S+ L + + Sbjct: 56 KEKVKRSQKATEFIDYSIEQSHHA-ILTPLQTHLTMKGSSMKCSSLSSEAILFTLTLQLT 114 Query: 349 VAVGREAVVLFRVERLHHRVI 411 +G E +L+ + +H ++I Sbjct: 115 QTLGLECCLLYLSKTIHPQII 135
>Y1322_ARATH (Q9C8S6) C2 domain protein At1g63220| Length = 147 Score = 28.9 bits (63), Expect = 9.1 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%) Frame = -3 Query: 525 KIEVFDHDTFTKDDTMGDAEFGILD-FVE--------IAMKDLSHVRDDTVMKTFHPEED 373 K ++FD D T+DD +G+A + FVE +KD + + V +F P E+ Sbjct: 68 KAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSEN 127 Query: 372 NCFSAD--SHITWKDGKVS 322 D S+ WK+ + S Sbjct: 128 RSRGMDEESYGGWKNSEAS 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,467,269 Number of Sequences: 219361 Number of extensions: 1649555 Number of successful extensions: 4714 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4573 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4711 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)