ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4n03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chai... 55 6e-08
2RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chai... 54 1e-07
3RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chai... 53 2e-07
4RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain... 52 4e-07
5RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chai... 43 2e-04
6RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain... 43 2e-04
7RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chai... 43 2e-04
8RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chai... 38 0.006
9RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chai... 37 0.013
10RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chai... 37 0.017
11RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chai... 37 0.017
12RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chai... 37 0.017
13RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chai... 36 0.022
14RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain... 36 0.022
15RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain... 36 0.022
16RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chai... 36 0.022
17RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small cha... 36 0.022
18RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small cha... 36 0.022
19RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small cha... 36 0.022
20RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chai... 36 0.022
21RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chai... 36 0.022
22RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain... 36 0.029
23RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain... 36 0.029
24RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain... 36 0.029
25RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chai... 36 0.029
26RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chai... 36 0.029
27RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chai... 36 0.029
28RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chai... 36 0.029
29RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chai... 36 0.029
30RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain... 36 0.029
31RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chai... 36 0.029
32RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chai... 36 0.029
33RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chai... 36 0.029
34RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chai... 36 0.029
35RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chai... 36 0.029
36RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chai... 36 0.029
37RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain... 36 0.029
38RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chai... 36 0.029
39RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chai... 36 0.029
40RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chai... 36 0.029
41RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small cha... 36 0.029
42RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chai... 36 0.029
43RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small cha... 36 0.029
44RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chai... 36 0.029
45RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chai... 36 0.029
46RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain... 35 0.038
47RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chai... 35 0.038
48RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain... 35 0.050
49RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chai... 35 0.050
50RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small cha... 35 0.050
51RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain... 35 0.050
52RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain... 35 0.050
53RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small cha... 35 0.050
54RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain... 35 0.065
55RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chai... 35 0.065
56RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chai... 35 0.065
57RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain... 34 0.085
58RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain... 34 0.085
59RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain... 34 0.085
60RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain... 34 0.085
61RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chai... 34 0.085
62RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chai... 34 0.085
63RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain ... 33 0.14
64RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain ... 33 0.14
65RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chai... 33 0.14
66RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chai... 33 0.14
67RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chai... 33 0.14
68RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chai... 33 0.14
69RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chai... 33 0.14
70RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chai... 33 0.14
71RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chai... 33 0.14
72RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chai... 33 0.14
73RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain... 33 0.19
74RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain... 33 0.25
75RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chai... 33 0.25
76RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain... 33 0.25
77RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain... 33 0.25
78RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain... 33 0.25
79RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain... 33 0.25
80RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chai... 32 0.32
81RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chai... 32 0.32
82RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chai... 32 0.32
83RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain... 32 0.32
84RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain... 32 0.42
85RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain... 32 0.55
86RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain,... 31 0.72
87RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain... 31 0.94
88RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chai... 30 2.1
89RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain... 29 2.7
90RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain... 28 7.9
91RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain... 28 7.9
92RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain... 28 7.9 
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PWS4.3)
          Length = 174

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 28/40 (70%)
 Frame = -3

Query: 266 VXKXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESGKA 147
           V K    A V + G DNL QVQCVSFIAFRP  CEESGKA
Sbjct: 135 VKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPGCEESGKA 174
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>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PW9)
          Length = 175

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -3

Query: 266 VXKXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESGKA 147
           V K    A V + G DN+ QVQCVSFIAFRP  CEESGKA
Sbjct: 136 VKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPGCEESGKA 175
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>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512|
           (EC 4.1.1.39) (RuBisCO small subunit) (Fragment)
          Length = 113

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -3

Query: 266 VXKXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESGKA 147
           V K    A V I G DN+ QVQCVSFIAF+P  CEESGKA
Sbjct: 74  VKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 113
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>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 174

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = -3

Query: 266 VXKXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESGKA 147
           V K    A V I G DN+ QVQCVSFIAF+P  C+ESGKA
Sbjct: 135 VKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCQESGKA 174
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>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit C)
          Length = 175

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESG 153
           K    A V I G DN+ QVQ +SFIA++P  CEESG
Sbjct: 138 KAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
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>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 175

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRPTXCEESGKA 147
           I G DN+ QVQ VSFIA +P  CEESGKA
Sbjct: 147 IIGFDNMRQVQSVSFIASKPPGCEESGKA 175
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>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit A)
          Length = 175

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESG 153
           K    A + I G DN+ QVQ +SFIA++P  CEESG
Sbjct: 138 KAYPDAFIRIIGFDNVRQVQLISFIAYKPPGCEESG 173
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>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 172

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 20/36 (55%), Positives = 23/36 (63%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRPTXCEESG 153
           K    A V I G DN+ QVQ +SFIA+ P  CEESG
Sbjct: 136 KAYPDAFVRIIGFDNVRQVQLISFIAYNP-GCEESG 170
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>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 180

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN  QVQCVSFIAF+P
Sbjct: 149 KAYPSAFIRIIGFDNKRQVQCVSFIAFKP 177
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>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 5)
          Length = 182

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQCVSFIA++P
Sbjct: 149 KAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
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>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 4)
          Length = 183

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQCVSFIA++P
Sbjct: 150 KAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
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>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 6)
          Length = 186

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQCVSFIA++P
Sbjct: 153 KAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
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>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 182

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
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>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
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>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRPT 171
           A + I G DN  QVQC+SFIA++PT
Sbjct: 154 AFIRIIGFDNNRQVQCISFIAYKPT 178
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>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 8B)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A V I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
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>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3B)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A V I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
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>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3A/3C)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A V I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
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>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2A) (LESS 5)
          Length = 180

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A V I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
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>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 183

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 150 KAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
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>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1) (LESS17)
          Length = 181

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A V I G DN+ QVQC+SFIA++P
Sbjct: 150 KAYPQAWVRIIGFDNVRQVQCISFIAYKP 178
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>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA++P
Sbjct: 152 AFIRIIGFDNVRQVQCISFIAYKP 175
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>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 187

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
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>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA++P
Sbjct: 156 AFIRIIGFDNVRQVQCISFIAYKP 179
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>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU5B)
          Length = 177

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 155 VRIIGFDNKRQVQCISFIAYKPT 177
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>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU5A)
          Length = 177

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 155 VRIIGFDNKRQVQCISFIAYKPT 177
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>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU40B)
          Length = 177

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 155 VRIIGFDNKRQVQCISFIAYKPT 177
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>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU40A)
          Length = 177

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 155 VRIIGFDNKRQVQCISFIAYKPT 177
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>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU26)
          Length = 177

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 155 VRIIGFDNKRQVQCISFIAYKPT 177
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>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
           (TSSU3-8)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
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>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2C)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2B)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2A)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU11A)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPNAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU8)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPNAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 149 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
to top
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 173

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRPT 171
           A + I G DN+ QVQCVSFIA +PT
Sbjct: 147 AWIRIIGFDNVRQVQCVSFIASKPT 171
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>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit SSU1)
          Length = 173

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRPT 171
           V I G DN  QVQC+SFIA++PT
Sbjct: 151 VRIIGFDNKRQVQCISFIAYKPT 173
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>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 183

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN  QVQCVSFIA++P
Sbjct: 151 KAYPSAFIRIIGFDNKRQVQCVSFIAYKP 179
to top
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 181

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 150 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 178
to top
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3B)
          Length = 181

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRPTXCEES 156
           A + I G DN  QVQC+SFIA++P    E+
Sbjct: 152 AFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
to top
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit S41)
          Length = 181

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 150 KAYPQAWIRIIGFDNVRQVQCISFIAYKP 178
to top
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2B)
          Length = 181

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRPTXCEES 156
           A + I G DN  QVQC+SFIA++P    E+
Sbjct: 152 AFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
to top
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 181

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN+ QVQC+SFIA++P
Sbjct: 150 KSYPQAWIRIIGFDNVRQVQCISFIAYKP 178
to top
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 184

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN  QVQCVSFIA++P
Sbjct: 152 KAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
to top
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 189

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + + G DN+ QVQC+SFIA++P
Sbjct: 156 AFIRVIGFDNVRQVQCISFIAYKP 179
to top
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit C)
          Length = 181

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA++P
Sbjct: 155 AWIRIIGFDNVRQVQCISFIAYKP 178
to top
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 177

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A V I G DN  QVQC+SFIA++P
Sbjct: 153 AHVRIIGFDNKRQVQCISFIAYKP 176
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>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 180

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A   I G DN+ QVQC+SFIA++P
Sbjct: 147 KAYPEAFTRIIGFDNVRQVQCISFIAYKP 175
to top
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1A)
          Length = 180

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 152 AFIRIIGFDNTRQVQCISFIAYKP 175
to top
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 183

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    + + I G DN+ QVQC+SFIA++P
Sbjct: 152 KAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
to top
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 183

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    + + I G DN+ QVQC+SFIA++P
Sbjct: 152 KAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
to top
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1B)
          Length = 181

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 152 AFIRIIGFDNTRQVQCISFIAYKP 175
to top
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + I G DN+ QVQC+SFIA++P
Sbjct: 154 IRIIGFDNVRQVQCISFIAYKP 175
to top
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 4)
          Length = 178

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + I G DN+ QVQC+SFIA++P
Sbjct: 154 IRIIGFDNVRQVQCISFIAYKP 175
to top
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 178

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + I G DN+ QVQC+SFIA++P
Sbjct: 154 IRIIGFDNVRQVQCISFIAYKP 175
to top
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    + + I G DN  QVQC+SFIA++P
Sbjct: 151 KTYPTSHIRIIGFDNKRQVQCISFIAYKP 179
to top
>RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain (EC|
           4.1.1.39) (RuBisCO small subunit) (Fragment)
          Length = 82

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 53  AFIRIIGFDNNRQVQCISFIAYKP 76
to top
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 183

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRPTXCE 162
           I G DN+ QVQC+SF+A++P   E
Sbjct: 160 IIGFDNVRQVQCISFLAYKPKGAE 183
to top
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 181

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 152 ALIRIIGFDNNRQVQCISFIAYKP 175
to top
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit F1)
          Length = 181

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 152 AFIRIIGFDNNRQVQCISFIAYKP 175
to top
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 181

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN  QVQC+SFIA++P
Sbjct: 152 AFIRIIGFDNNRQVQCISFIAYKP 175
to top
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3A)
          Length = 180

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A V I G DN+ QVQC+SFIA  P
Sbjct: 154 AFVRIIGFDNVRQVQCISFIAHTP 177
to top
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3C) (PSS15)
          Length = 180

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A V I G DN+ QVQC+SFIA  P
Sbjct: 154 AFVRIIGFDNVRQVQCISFIAHTP 177
to top
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 4)
          Length = 178

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 152 AWIRIIGFDNVRQVQCISFIASKP 175
to top
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 178

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 152 AWIRIIGFDNVRQVQCISFIASKP 175
to top
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1/4)
          Length = 179

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQCVSFI  RP
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVERP 178
to top
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 7)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 147 AWIRIIGFDNVRQVQCISFIASKP 170
to top
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 6)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 147 AWIRIIGFDNVRQVQCISFIASKP 170
to top
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 5)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 147 AWIRIIGFDNVRQVQCISFIASKP 170
to top
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 147 AWIRIIGFDNVRQVQCISFIASKP 170
to top
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 1)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA +P
Sbjct: 147 AWIRIIGFDNVRQVQCISFIASKP 170
to top
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRP 174
           I G DN+ QVQC+SF+A++P
Sbjct: 160 IIGFDNVRQVQCISFLAYKP 179
to top
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 170

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRP 174
           + G DN+ Q QCVSFIA++P
Sbjct: 147 VIGFDNIKQTQCVSFIAYKP 166
to top
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 180

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G D+  QVQCVSFIA++P
Sbjct: 154 AFIRIIGFDSNRQVQCVSFIAYKP 177
to top
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+SFIA  P
Sbjct: 152 AFIRIIGFDNVRQVQCISFIASTP 175
to top
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + I G DN+ QVQC+ FIA RP
Sbjct: 152 AWIRIIGFDNVRQVQCIMFIASRP 175
to top
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 189

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQC+SFI  +P
Sbjct: 158 KAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
to top
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 171

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQC+SFI  +P
Sbjct: 142 KAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
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>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 5)
          Length = 179

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQCVSFI  +P
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
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>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 179

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQCVSFI  +P
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
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>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 2)
          Length = 179

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + + G DN+ QVQCVSFI  +P
Sbjct: 150 KEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
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>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 181

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A + + G DN+ QVQC+SFI  +P
Sbjct: 154 AFIRVIGFDNIRQVQCISFIVAKP 177
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>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + I G DN+ QVQC+SFIA  P
Sbjct: 156 IRIIGFDNVRQVQCISFIAHTP 177
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>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 KXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           K    A + I G DN  QVQ +SFIA++P
Sbjct: 151 KAYPSAFIRIIGFDNKRQVQIISFIAYKP 179
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>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1)
           (Fragment)
          Length = 136

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 245 AXVXIXGXDNLXQVQCVSFIAFRP 174
           A V + G +N+ QVQC+SFIA  P
Sbjct: 110 AFVRVIGFNNVRQVQCISFIAHTP 133
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>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 178

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRP 174
           I G DN  QVQC+SF+ ++P
Sbjct: 156 IIGFDNTRQVQCISFLTYKP 175
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>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC|
           4.1.1.39) (RuBisCO small subunit)
          Length = 123

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 266 VXKXXXXAXVXIXGXDNLXQVQCVSFIAFRP 174
           V K    A V   G ++  +VQC+SFIA++P
Sbjct: 90  VKKAPPDAFVRFIGFNDKREVQCISFIAYKP 120
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>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 180

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 227 GXDNLXQVQCVSFIAFRPT 171
           G DN  QVQC SFI  +PT
Sbjct: 161 GFDNTRQVQCASFIVHQPT 179
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>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 168

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 233 IXGXDNLXQVQCVSFIAFRPTXCE 162
           I G DN+ Q Q ++FIA++P   E
Sbjct: 145 ILGFDNIRQTQWLTFIAYKPAGSE 168
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>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC|
           4.1.1.39) (RuBisCO small subunit)
          Length = 110

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + + G DN+ Q Q VSFI  RP
Sbjct: 86  IRVAGFDNIKQCQTVSFIVHRP 107
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>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC|
           4.1.1.39) (RuBisCO small subunit)
          Length = 111

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 239 VXIXGXDNLXQVQCVSFIAFRP 174
           + + G DN+ Q Q VSFI ++P
Sbjct: 85  IRVVGFDNIKQCQTVSFIVYKP 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,986,287
Number of Sequences: 219361
Number of extensions: 380277
Number of successful extensions: 677
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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