ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4n07 |
|---|---|
| Clone Library Name | barley_pub |
>HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 526 Score = 228 bits (580), Expect = 1e-59 Identities = 110/128 (85%), Positives = 113/128 (88%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EIDVEYKELAL+SGIKHWGRVPALGCEPTFI+DLADAVIESLPYVGAMAVSNLEARQ LV Sbjct: 396 EIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIESLPYVGAMAVSNLEARQPLV 455 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 PLGSVEELLAAYDSKRD LPPPV VWEWGWTKSAETWNGR LEVTTG+G Sbjct: 456 PLGSVEELLAAYDSKRDELPPPVTVWEWGWTKSAETWNGRAAMLAVLALLVLEVTTGEGF 515 Query: 158 LHQWGILP 135 LHQWGILP Sbjct: 516 LHQWGILP 523
>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 Score = 211 bits (538), Expect = 7e-55 Identities = 104/130 (80%), Positives = 110/130 (84%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EIDVEYKELAL+SGIK+WGRVPALG EP FISDLADAV+ESLPYVGAMAVSNLEARQSLV Sbjct: 383 EIDVEYKELALKSGIKNWGRVPALGTEPMFISDLADAVVESLPYVGAMAVSNLEARQSLV 442 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 PLGSVEELLA YDS+R LP PV +WEWGWTKSAETWNGR LEVTTG+G Sbjct: 443 PLGSVEELLATYDSQRRELPAPVTMWEWGWTKSAETWNGRAAMLAVLALLVLEVTTGKGF 502 Query: 158 LHQWGILPPL 129 LHQWGILP L Sbjct: 503 LHQWGILPSL 512
>HEMH_HORVU (P42045) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 484 Score = 79.7 bits (195), Expect = 4e-15 Identities = 37/58 (63%), Positives = 47/58 (81%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQS 345 EID+EY+ELAL+SGI++WGRVPALGC +FISDLADAV+E+LP AMA ++ S Sbjct: 391 EIDMEYRELALESGIENWGRVPALGCTSSFISDLADAVVEALPSASAMATRKVKDTDS 448
>HEMH1_ARATH (P42043) Ferrochelatase-1, chloroplast/mitochondrial precursor (EC| 4.99.1.1) (Ferrochelatase I) (Protoheme ferro-lyase 1) (Heme synthetase 1) Length = 466 Score = 77.0 bits (188), Expect = 3e-14 Identities = 36/52 (69%), Positives = 45/52 (86%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSN 363 EID+EY+ELAL+SG+++WGRVPALG P+FI+DLADAVIESLP AM+ N Sbjct: 372 EIDMEYRELALESGVENWGRVPALGLTPSFITDLADAVIESLPSAEAMSNPN 423
>HEMH_ANASP (Q8YQR8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 76.3 bits (186), Expect = 5e-14 Identities = 47/127 (37%), Positives = 65/127 (51%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EID+EY+E+A ++GI ++ RVPA P FI LAD VI++L + L Sbjct: 281 EIDIEYREIAEEAGIHNFRRVPAPNTHPVFIRALADLVIDALN----------KPSFKLS 330 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 +++++ Y P WEWG T SAE WNGR +E+ TGQGL Sbjct: 331 QAAQIKKMVKMY---------PPESWEWGMTSSAEVWNGR-IAMLGFIALIIELVTGQGL 380 Query: 158 LHQWGIL 138 LH G+L Sbjct: 381 LHMIGLL 387
>HEMH_CUCSA (P42044) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 514 Score = 74.7 bits (182), Expect = 1e-13 Identities = 35/49 (71%), Positives = 42/49 (85%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMA 372 EID+EYK LAL+SGI++WGRVPAL C +FISDLADAVIE+LP A+A Sbjct: 397 EIDMEYKHLALESGIQNWGRVPALNCNSSFISDLADAVIEALPSATALA 445
>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 72.0 bits (175), Expect = 9e-13 Identities = 47/129 (36%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQS 345 EID+EY+ELA ++G+ ++ RV AL P FI LAD V SL P V A + L + Sbjct: 285 EIDIEYRELATEAGVVNFRRVRALDTYPPFIEGLADLVTTSLEGPEVSLDAAAELPTKVK 344 Query: 344 LVPLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQ 165 L P WEWGW S+E WNGR LE+ +G Sbjct: 345 LYPQEK---------------------WEWGWNNSSEVWNGR-LAMLGFSAFLLELISGH 382 Query: 164 GLLHQWGIL 138 G LH G+L Sbjct: 383 GPLHALGLL 391
>HEMH_PROMP (Q7V2F5) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 2/129 (1%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQS 345 EID+EYKE+A ++GI ++ RV AL PTFI L++ V+ L P + S L + Sbjct: 285 EIDIEYKEIAEKAGIVNFRRVKALNTHPTFIDGLSELVVSCLEGPIINIEKASELPEKVK 344 Query: 344 LVPLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQ 165 L P W+WGW S+E WNGR +E+ +G Sbjct: 345 LYPQEK---------------------WQWGWNNSSEVWNGR-VAMIVFLILFIELISGS 382 Query: 164 GLLHQWGIL 138 G LH+ GIL Sbjct: 383 GPLHKLGIL 391
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 71.2 bits (173), Expect = 2e-12 Identities = 45/127 (35%), Positives = 66/127 (51%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EID+EY+E+A ++GI+ + RVPAL P FI DL+D V ++L + R L Sbjct: 281 EIDIEYREIAEEAGIERFLRVPALNTHPLFIQDLSDLVEQTLE----------QPRFRLE 330 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 + + + + Y +R WEWG T +AE WNGR +E+ TG+G Sbjct: 331 DVTLLPKKVKLYPQER---------WEWGITLNAEVWNGR-IAMLGFLALLVELLTGRGP 380 Query: 158 LHQWGIL 138 LH G+L Sbjct: 381 LHALGLL 387
>HEMH_SYNY3 (P54225) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 69.3 bits (168), Expect = 6e-12 Identities = 46/127 (36%), Positives = 64/127 (50%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EID+EY+E+A ++GI ++ RVPAL P FI LA V++SL ++ V Sbjct: 281 EIDIEYREIAEEAGIDNFQRVPALNTHPVFIDALAQMVMDSL--------NDPPCTFETV 332 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 P K++M P WEWG T +AE WNGR +E+ +GQG Sbjct: 333 P-----------HPKKNMKMYPQERWEWGLTTAAEVWNGR-LAMLGFIALLVELISGQGP 380 Query: 158 LHQWGIL 138 LH G+L Sbjct: 381 LHFVGLL 387
>HEMH_PROMM (Q7V6C6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 69.3 bits (168), Expect = 6e-12 Identities = 46/129 (35%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQS 345 E+D+EY+ELA ++GI H+ RVPAL PTFI LAD V SL P + + L R Sbjct: 285 ELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVK 344 Query: 344 LVPLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQ 165 P W+WG S+E WNGR LE+ +G Sbjct: 345 FYPQER---------------------WQWGLNTSSEAWNGR-IAMLGFAAFLLELISGH 382 Query: 164 GLLHQWGIL 138 G LH G+L Sbjct: 383 GPLHAIGLL 391
>HEMH_PROMA (Q7VD58) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 67.4 bits (163), Expect = 2e-11 Identities = 46/127 (36%), Positives = 61/127 (48%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EID+EYK++AL +GI ++ RV AL P FI+ LAD V A +S E SL Sbjct: 285 EIDIEYKKIALNNGIINFRRVKALDTYPLFINGLADLV--------ASCLSGPEI--SLD 334 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 + E + Y ++ W+WGW SAE WNGR E+ G G Sbjct: 335 EAAKLPEKVKLYPQEK---------WQWGWNNSAEVWNGR-VAMFVFIICFFELVIGNGP 384 Query: 158 LHQWGIL 138 LH G+L Sbjct: 385 LHYIGLL 391
>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 66.6 bits (161), Expect = 4e-11 Identities = 47/127 (37%), Positives = 64/127 (50%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLV 339 EID+EY+E+A ++GI+ + RVPAL FIS LA V E+L A + E QS Sbjct: 282 EIDIEYREIAAEAGIEVFRRVPALNDHNGFISALAQLVKEAL---AAPPRTFAEVNQS-- 336 Query: 338 PLGSVEELLAAYDSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGL 159 + + Y +R WEWG T +AE WNGR +E+ +GQG Sbjct: 337 -----RKRVKLYPQER---------WEWGMTSAAERWNGR-LAMLGFLALMIELISGQGP 381 Query: 158 LHQWGIL 138 LH G+L Sbjct: 382 LHMLGLL 388
>YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17| Length = 49 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = -2 Query: 266 VWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 138 +W WG+T AE WNGR E TGQG LH GIL Sbjct: 7 IWNWGFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGIL 49
>YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)| Length = 48 Score = 45.1 bits (105), Expect = 1e-04 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -2 Query: 263 WEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 138 W WG+T SAETWNGR +E+ TG+GLL+ G++ Sbjct: 6 WFWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSGLM 47
>HEMH_GLOVI (Q7NMC7) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 327 Score = 43.1 bits (100), Expect = 5e-04 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESL 393 EI++EY+E+A +GI + R AL TFI DLA+ VIE+L Sbjct: 281 EIEIEYREVAEAAGIHDFRRAKALNVNKTFIDDLAEMVIENL 322
>HEMH_GEOSL (Q747F5) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 317 Score = 37.7 bits (86), Expect = 0.019 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAV 405 EID+EY + A + G + R P+L PTFIS LAD V Sbjct: 275 EIDIEYAQEAHKLGYSRFRRSPSLNTSPTFISCLADLV 312
>HEMH_CAUCR (P57777) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 347 Score = 37.4 bits (85), Expect = 0.025 Identities = 21/42 (50%), Positives = 26/42 (61%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESL 393 E+D EY ELA + G + RV ALG P FI LA AV +S+ Sbjct: 276 ELDHEYAELAEEVGAAPYLRVSALGTAPEFIDGLAKAVRDSV 317
>HEMH_LEPBI (Q8GCV0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 362 Score = 37.0 bits (84), Expect = 0.033 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIES 396 EI ++K+L + G K + R+PALG P+FI LA+ V+ S Sbjct: 298 EIGEQFKDLTWEMGGKSFVRIPALGIYPSFIQFLAEKVMHS 338
>HEMH_AQUAE (O67083) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 309 Score = 36.6 bits (83), Expect = 0.042 Identities = 18/38 (47%), Positives = 24/38 (63%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAV 405 E+D +Y+ELA + G + + RVP L P FIS L D V Sbjct: 268 ELDKQYRELAQELGYEEFVRVPTLRTNPYFISALEDLV 305
>HEMH_SYMTH (Q67T48) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 320 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVIESLP 390 E++VEY E +++G + + +PA P FI L D V LP Sbjct: 277 ELEVEYAEEFVKAGGERYDYLPAANDHPLFIDCLEDLVRRHLP 319
>HEMH_WOLPM (Q73FY6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 315 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/39 (43%), Positives = 25/39 (64%) Frame = -2 Query: 518 EIDVEYKELALQSGIKHWGRVPALGCEPTFISDLADAVI 402 E+D+EYK + ++ G ++ RVP L +P FI LAD I Sbjct: 277 ELDIEYKAI-IKDG--YYFRVPTLSTDPLFIKCLADLCI 312
>Y378_MYCLE (Q49857) Hypothetical protein ML0378 precursor| Length = 359 Score = 29.6 bits (65), Expect = 5.2 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 82 LKGRPEIHPSIPAYQGRGGKIPHWCKSPCPVVTSSTRRANTASIAA 219 L G P P P G +P W SP P+V RR + I A Sbjct: 162 LFGLPLCEPIYPTPAGLVAAVPDWSVSPIPLVALYLRRPDAKPITA 207
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 34 YSIRTFPNEPKLPSDPLKGRPEIHPSIPAYQGRGGKIPH 150 Y I+ P P++P P+I P IP YQ G ++PH Sbjct: 31 YGIKPLP--PQIP-------PQIPPQIPQYQPLGQQVPH 60
>YCF17_GUITH (O78425) Hypothetical 6.2 kDa protein ycf17| Length = 53 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -2 Query: 269 IVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLL 156 I W WG+ AE WNGR +E T + +L Sbjct: 10 IPWIWGFNVYAENWNGRLAMISFLLIICVEFITNKNVL 47
>YB40_YEAST (P38303) Very hypothetical 11.0 kDa protein in RPS13-URP1| intergenic region Length = 103 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 231 MEWTCCYAGRVGSPGAGGNNRTGA 160 M W +GR GSPG+GG + T A Sbjct: 28 MCWPTATSGRAGSPGSGGGHNTRA 51
>XKR4_MOUSE (Q5GH67) XK-related protein 4| Length = 647 Score = 29.3 bits (64), Expect = 6.8 Identities = 21/62 (33%), Positives = 24/62 (38%) Frame = -1 Query: 321 GAASSVRLEARHAASSGDCVGVGLDEECRDMEWTCCYAGRVGSPGAGGNNRTGALAPVGY 142 G S E AA G C G C CC AG GS G+GG+ G + G Sbjct: 37 GLPSGSGAEDTEAAGGGCCPDGGGCSRC-----CCCCAGSGGSAGSGGSGGGGRGSGAGS 91 Query: 141 LA 136 A Sbjct: 92 AA 93
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +1 Query: 52 PNEPKLPSDPLKGRPEIHPSIPAYQGRGGKIPHWCKSPCPVVTSSTRRA 198 P E +L +DP GRP +P +G G + W + +T RRA Sbjct: 112 PLEQELQADPDSGRPSQGSLVPGGRGCSG-VRRWVRRHTATLTEQQRRA 159
>XKR4_HUMAN (Q5GH76) XK-related protein 4| Length = 650 Score = 29.3 bits (64), Expect = 6.8 Identities = 21/59 (35%), Positives = 23/59 (38%) Frame = -1 Query: 321 GAASSVRLEARHAASSGDCVGVGLDEECRDMEWTCCYAGRVGSPGAGGNNRTGALAPVG 145 G S E AA G C G C CC AG GS G+GG+ G P G Sbjct: 37 GLPSGSGAEDEEAAGGGCCPDGGGCSRC-----CCCCAGSGGSAGSGGSG--GVAGPGG 88
>APT_CORGL (O87330) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 185 Score = 29.3 bits (64), Expect = 6.8 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Frame = -2 Query: 485 QSGIKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAA 306 + G+ P LG +F++ + DA+ E+ + A + L+AR L+ +L Sbjct: 28 EKGVLFEDLTPVLGDAESFVA-VVDAMAEAAEKLNAEIIGGLDARGFLLGSAVAYKLGLG 86 Query: 305 YDS--KRDMLPPPVIVWEW 255 + K+ LPPPV+ E+ Sbjct: 87 VLAIRKKGKLPPPVVTQEY 105
>RSC1_SCHPO (O74964) Chromatin structure remodeling complex protein rsc1| (Remodel the structure of chromatin complex subunit 1) Length = 803 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 5/42 (11%) Frame = +1 Query: 169 PVVTSSTRRANTASIAARPFH-----VSALFVQPHSHTITGG 279 P++ +ST+ +T+ I ARPF+ + +L HSH I+GG Sbjct: 604 PIMRTSTK--STSPIPARPFYAQSGSLQSLNTTQHSHQISGG 643
>RECF_NOCFA (Q5Z3Z6) DNA replication and repair protein recF| Length = 388 Score = 28.9 bits (63), Expect = 8.9 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -1 Query: 207 GRVGSPGAGGNNRTGALAPVGYLAT 133 GR GA GN +T L VGYLAT Sbjct: 24 GRTVFLGANGNGKTNLLEAVGYLAT 48 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,020,116 Number of Sequences: 219361 Number of extensions: 1703185 Number of successful extensions: 4963 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4950 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
