Clone Name | rbaak4l21 |
---|---|
Clone Library Name | barley_pub |
>CRTI_ORYSA (Q9ZTN9) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 566 Score = 292 bits (747), Expect = 7e-79 Identities = 144/163 (88%), Positives = 153/163 (93%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LFSRSSLL VYA MS+ CKE YDP+RSMLELVFAPAEEW+GRSDTEIIEATM E Sbjct: 404 NTYDHLLFSRSSLLSVYADMSVTCKEYYDPSRSMLELVFAPAEEWVGRSDTEIIEATMQE 463 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKT+P+CEPCRP+QRSPIEGFYLAGDYTKQ Sbjct: 464 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQ 523 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPVAS 161 KYLASMEGAVLSGKLCAQS+V+D KMLSRRS +SLQSE PVAS Sbjct: 524 KYLASMEGAVLSGKLCAQSVVEDYKMLSRRSLKSLQSEVPVAS 566
>CRTI_MAIZE (P49086) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 571 Score = 283 bits (724), Expect = 3e-76 Identities = 143/164 (87%), Positives = 150/164 (91%), Gaps = 1/164 (0%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LFSRSSLL VYA MS+ CKE YDPNRSMLELVFAPA+EWIGRSDTEII+ATM E Sbjct: 408 NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPADEWIGRSDTEIIDATMEE 467 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LAKLFPDEIAADQSKAKILKYH+VKTPRSVYKTVPNCEPCRP+QRSPIEGFYLAGDYTKQ Sbjct: 468 LAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQ 527 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQS-ETPVAS 161 KYLASMEGAVLSGKLCAQSIVQD L+ RSQ+SLQS E PV S Sbjct: 528 KYLASMEGAVLSGKLCAQSIVQDYSRLALRSQKSLQSGEVPVPS 571
>CRTI_NARPS (Q40406) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 570 Score = 268 bits (684), Expect = 1e-71 Identities = 132/161 (81%), Positives = 144/161 (89%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LF+RS LL VYA MS+ CKE YDPNRSMLELVFAPAEEWI RSD+EIIE TM E Sbjct: 409 NTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISRSDSEIIERTMKE 468 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKT+P+CEPCRP+QRSPIEGFYLAGDYT Q Sbjct: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQ 528 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPV 167 KYLASMEGAVLSGKLCAQSIVQD ++L RRS+++ +E V Sbjct: 529 KYLASMEGAVLSGKLCAQSIVQDYELLVRRSKKASTAEMTV 569
>CRTI_SOYBN (P28553) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 570 Score = 265 bits (678), Expect = 7e-71 Identities = 130/161 (80%), Positives = 143/161 (88%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LFSRS LL VYA MS+ CKE Y PN+SMLELVFAPAEEWI RSD +II+ATM E Sbjct: 410 NTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTE 469 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LAKLFPDEI+ADQSKAKILKYHVVKTPRSVYKTVPNCEPCRP+QRSPIEGFYLAGDYTKQ Sbjct: 470 LAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQ 529 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPV 167 KYLASMEGAVLSGKLCAQ+IVQDS++L+ R Q+ + + V Sbjct: 530 KYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASVV 570
>CRTI_LYCES (P28554) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 583 Score = 264 bits (675), Expect = 1e-70 Identities = 131/161 (81%), Positives = 143/161 (88%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LFSRSSLL VYA MS+ CKE Y+PN+SMLELVFAPAEEWI RSD+EII+ATM E Sbjct: 423 NTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMKE 482 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LA LFPDEI+ADQSKAKILKYHVVKTPRSVYKTVP CEPCRP+QRSPIEGFYLAGDYTKQ Sbjct: 483 LATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGDYTKQ 542 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPV 167 KYLASMEGAVLSGKLCAQ+IVQD ++L RSQ+ L + V Sbjct: 543 KYLASMEGAVLSGKLCAQAIVQDYELLVGRSQKKLSEASVV 583
>CRTI_ARATH (Q07356) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 566 Score = 262 bits (670), Expect = 6e-70 Identities = 130/163 (79%), Positives = 143/163 (87%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT DH LFSRS+LL VYA MSL CKE YDPNRSMLELVFAPAEEWI R+D++II+ATM E Sbjct: 404 NTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKE 463 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 L KLFPDEI+ADQSKAKILKYHVVKTPRSVYKT+PNCEPCRP+QRSPIEGFYLAGDYTKQ Sbjct: 464 LEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQ 523 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPVAS 161 KYLASMEGAVLSGK C+QSIVQD ++L+ L SE V+S Sbjct: 524 KYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKL-SEATVSS 565
>CRTI_CAPAN (P80093) Phytoene dehydrogenase, chloroplast precursor (EC| 1.14.99.-) (Phytoene desaturase) Length = 582 Score = 259 bits (663), Expect = 4e-69 Identities = 130/161 (80%), Positives = 143/161 (88%) Frame = -1 Query: 649 NTXDHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLE 470 NT D+ LFSRS LL VYA MS+ CKE YDPN+SMLELVFAPAEEW+ RSD+EII+ATM E Sbjct: 422 NTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWVSRSDSEIIDATMKE 481 Query: 469 LAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQ 290 LAKLFPDEI+ADQSKAKILKYHVVKTPRSVYKTVP CEPCR +QRSP+EGFYLAGDYTKQ Sbjct: 482 LAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTKQ 541 Query: 289 KYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPV 167 KYLASMEGAVLSGKLCAQ+IVQD ++L RSQ L +ET V Sbjct: 542 KYLASMEGAVLSGKLCAQAIVQDYELLVGRSQRKL-AETSV 581
>CRTI_SYNY3 (P29273) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 472 Score = 178 bits (451), Expect = 1e-44 Identities = 88/140 (62%), Positives = 105/140 (75%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLELAK 461 DH LFSRS LL VYA MS C+E DP++SMLELV APA++WIG+SD EI+ ATM E+ + Sbjct: 318 DHLLFSRSPLLSVYADMSNTCREYSDPDKSMLELVLAPAQDWIGKSDEEIVAATMAEIKQ 377 Query: 460 LFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQKYL 281 LFP D + A++LK HVVKTPRSVYK P + CRP QR+ + FYLAGD+T QKYL Sbjct: 378 LFPQHFNGD-NPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYL 436 Query: 280 ASMEGAVLSGKLCAQSIVQD 221 SMEGAVLSGK CAQ+I D Sbjct: 437 GSMEGAVLSGKQCAQAIAAD 456
>CRTI_SYNP7 (P26294) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 474 Score = 176 bits (445), Expect = 7e-44 Identities = 90/148 (60%), Positives = 108/148 (72%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLELAK 461 DH LFSRS LL VYA MS C+E DP+RSMLELVFAPA++WIGRSD +I+ ATM E+ K Sbjct: 318 DHLLFSRSPLLSVYADMSNTCREYEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEK 377 Query: 460 LFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQKYL 281 LFP + ++ A++ KY +VKTP SVYK P + RP Q SPI F+L GDYT Q+YL Sbjct: 378 LFPQHFSG-ENPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYL 436 Query: 280 ASMEGAVLSGKLCAQSIVQDSKMLSRRS 197 ASMEGAVLSGKL AQ+I+ L RRS Sbjct: 437 ASMEGAVLSGKLTAQAIIARQDELQRRS 464
>ZDS_ARATH (Q38893) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 558 Score = 89.0 bits (219), Expect = 1e-17 Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 2/167 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++LA Y + ++L+ V P + ++ + +IIE +++ Sbjct: 397 DNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQV 456 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 +LFP + + + VVK +S+Y+ P +P RP Q++PI+ F+LAG YTKQ Sbjct: 457 TELFPSSRGLEVTCSS-----VVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQD 511 Query: 286 YLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPVASQL*IV 146 Y+ SMEGA LSG+ + I + L+ +++ S T V +L +V Sbjct: 512 YIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVPDELSLV 558
>ZDS_LYCES (Q9SE20) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 588 Score = 83.2 bits (204), Expect = 6e-16 Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 2/146 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++LA + Y + S+L+ V P + ++ S+ EII+ ++ Sbjct: 420 DNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQV 479 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 LFP + + + +LK +S+Y+ P +P RP Q++P+E F+LAG YTKQ Sbjct: 480 LALFPSSQGLEVTWSSVLKIG-----QSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQD 534 Query: 286 YLASMEGAVLSGKLCAQSIVQDSKML 209 Y+ SMEGA LSG+ + I + L Sbjct: 535 YIDSMEGATLSGRQASAYICNVGEQL 560
>ZDS_CAPAN (Q9SMJ3) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 588 Score = 82.8 bits (203), Expect = 8e-16 Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++LA E Y + S+L+ V P + ++ + EII ++ Sbjct: 420 DNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQV 479 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 LFP + + + VVK +S+Y+ P +P RP Q++P+E F+LAG YTKQ Sbjct: 480 LALFPSSQGLEVTWSS-----VVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQD 534 Query: 286 YLASMEGAVLSGKLCAQSIVQDSKML 209 Y+ SMEGA LSG+ + I + L Sbjct: 535 YIDSMEGATLSGRQASAYICDAGEQL 560
>ZDS_SYNY3 (P74306) Zeta-carotene desaturase (EC 1.14.99.30) (Carotene| 7,8-desaturase) Length = 489 Score = 82.8 bits (203), Expect = 8e-16 Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 2/146 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACK-EXYDPNR-SMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++L + Y P S+L+LV P + ++ S+ I + ++ Sbjct: 341 DNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQV 400 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 LFP AAD + + Y V+K +S+Y+ P + RP Q +PI F+LAG YT+Q Sbjct: 401 KALFPS--AADLN---MTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQD 455 Query: 286 YLASMEGAVLSGKLCAQSIVQDSKML 209 Y+ SMEGA LSG+ AQ+I+ + L Sbjct: 456 YIDSMEGATLSGRQAAQAILANQARL 481
>ZDS_ANASP (Q9R6X4) Zeta-carotene desaturase (EC 1.14.99.30) (Carotene| 7,8-desaturase) Length = 479 Score = 82.4 bits (202), Expect = 1e-15 Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 2/144 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++L Y S+L+LV P + +I S+ I + + ++ Sbjct: 340 DNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQV 399 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 +LFP + + Y VVK +S+Y+ P + RP Q++PI F+LAG YT+Q Sbjct: 400 YELFPSS-----RELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQD 454 Query: 286 YLASMEGAVLSGKLCAQSIVQDSK 215 Y+ SMEGA +SG+ A+ I+ + K Sbjct: 455 YIDSMEGATVSGRRAAKVILDNIK 478
>ZDS_TARER (Q9FV46) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 587 Score = 82.0 bits (201), Expect = 1e-15 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 4/158 (2%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + +A ++LA E Y + S+L+ V P + ++ + EII ++ Sbjct: 423 DNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQV 482 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 LFP + + + VVK +S+Y+ P +P RP Q++P++ F+LAG YTKQ Sbjct: 483 LALFPSSQGLEVTWSS-----VVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQD 537 Query: 286 YLASMEGAVLSGKLCAQSIVQDSKMLS--RRSQESLQS 179 Y+ SMEGA LSG+ + I + L+ R+ ++QS Sbjct: 538 YIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQS 575
>ZDS_NARPS (O49901) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 574 Score = 79.7 bits (195), Expect = 7e-15 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + ++ ++L+ E Y + S+++ V P + ++ + IIE ++ Sbjct: 405 DNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQV 464 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 LFP + +L VVK +S+Y+ P +P RP Q++P++ F+LAG YTKQ Sbjct: 465 LDLFPSSQGLE-----VLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQD 519 Query: 286 YLASMEGAVLSGKLCAQSI 230 Y+ SMEGA LSG+ A I Sbjct: 520 YIDSMEGATLSGRQAAAYI 538
>ZDS_MAIZE (Q9ZTP4) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 570 Score = 77.0 bits (188), Expect = 4e-14 Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 2/133 (1%) Frame = -1 Query: 640 DHXLFSRSSLLXVYAXMSLACKEXY--DPNRSMLELVFAPAEEWIGRSDTEIIEATMLEL 467 D+ L++ + ++ ++L+ Y + S+++ V P + ++ + EII ++ Sbjct: 405 DNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQV 464 Query: 466 AKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQK 287 +LFP + + + VVK +S+Y+ P +P RP Q++P++ F+L+G YTKQ Sbjct: 465 VELFPSSRGLEVTWSS-----VVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQD 519 Query: 286 YLASMEGAVLSGK 248 Y+ SMEGA LSG+ Sbjct: 520 YIDSMEGATLSGR 532
>Y4AB_RHISN (P55349) Hypothetical 44.6 kDa protein y4aB| Length = 417 Score = 33.5 bits (75), Expect = 0.56 Identities = 19/81 (23%), Positives = 38/81 (46%) Frame = -1 Query: 460 LFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQKYL 281 ++ D A ++ + +V R+ ++ P RP + + +LAGD+T Sbjct: 335 IWRDVCEAGGISGELPPWQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLP 394 Query: 280 ASMEGAVLSGKLCAQSIVQDS 218 A++EG+V SG A + ++ Sbjct: 395 ATIEGSVRSGNRAADLALSET 415
>CAPP_ERWCT (Q6DAR6) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 879 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 550 MLELVFAPAEEWIGR-SDTEIIEATMLELAKLFPDEIAAD 434 MLE+VFA A+ W+ D ++E + L K D++AAD Sbjct: 766 MLEMVFAKADLWLAEYYDQRLVEEKLWPLGKQLRDQLAAD 805
>LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase 1 (EC| 1.-.-.-) (Suppressor of presenilin 5) (P110b homolog) Length = 770 Score = 31.2 bits (69), Expect = 2.8 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 13/127 (10%) Frame = -1 Query: 562 PNRSMLELVFAPAEEWIGRSDTEIIEATMLELAKLFPDEIAADQSKAKILKYH------- 404 P +L E + D II+ M+ L K F + A I ++H Sbjct: 558 PGSKVLCTYIVGEEAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHITRWHDDELAFG 617 Query: 403 -----VVKTPRSVYKTVPNCEPCRPMQRSP-IEGFYLAGDYTKQKYLASMEGAVLSGKLC 242 ++T + + V P++ S + Y AG++T Y ++++GA +SG Sbjct: 618 SGAFMSLRTETTSFDDV-----MEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARA 672 Query: 241 AQSIVQD 221 A I D Sbjct: 673 AADISND 679
>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4) (BMK1 kinase) Length = 815 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = -3 Query: 350 PTYATVADRRVLSGWRLHEA---EIPGFHGRRGSIREALRSVHSAGF*DAVSQEPRKPAI 180 P + DR L+ R+ EA EI FH RR IR+ +R S V+ EP P + Sbjct: 360 PPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSL---QPVASEPGCPDV 416 Query: 179 RNP 171 P Sbjct: 417 EMP 419
>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) Length = 852 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 355 PCRPMQRSPIEGFYLAGDYTKQKYLASMEGAVLSG 251 P P PI + AG++T + Y A++ GA+LSG Sbjct: 784 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSG 818
>CAPP_YERPS (Q66G74) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 878 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -1 Query: 550 MLELVFAPAEEWIGR-SDTEIIEATMLELAKLFPDEIAAD 434 MLE+VFA A+ W+ D +++ ++ L + D++AAD Sbjct: 765 MLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>CAPP_YERPE (Q8ZA84) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 878 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -1 Query: 550 MLELVFAPAEEWIGR-SDTEIIEATMLELAKLFPDEIAAD 434 MLE+VFA A+ W+ D +++ ++ L + D++AAD Sbjct: 765 MLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1 kinase) Length = 806 Score = 30.4 bits (67), Expect = 4.7 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = -3 Query: 350 PTYATVADRRVLSGWRLHEA---EIPGFHGRRGSIREALRSVHSAGF*DAVSQEPRKPAI 180 P + DR L+ R+ EA EI FH RR IR+ +R S V+ EP P + Sbjct: 361 PPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSL---QPVASEPVCPDV 417 Query: 179 RNP 171 P Sbjct: 418 EMP 420
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 355 PCRPMQRSPIEGFYLAGDYTKQKYLASMEGAVLSG 251 P P PI + AG++T + Y A++ GA+LSG Sbjct: 785 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSG 819
>AOFB_PONPY (Q5RE98) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIV 227 R P++ Y AG T + MEGAV +G+ A+ I+ Sbjct: 414 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREIL 450
>AOFB_HUMAN (P27338) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIV 227 R P++ Y AG T + MEGAV +G+ A+ I+ Sbjct: 414 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREIL 450
>AOFA_CANFA (P58027) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETP 170 R P Y AG T + MEGAV +G+ A+ ++ L R +++ L+++ P Sbjct: 424 RQPFGRIYFAGTETATHWSGYMEGAVEAGERTAREVL---NALGRVAEKDLKTQEP 476
>AOF_ONCMY (P49253) Amine oxidase [flavin-containing] (EC 1.4.3.4) (Monoamine| oxidase) (MAO) Length = 522 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/73 (27%), Positives = 34/73 (46%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPVASQ 158 R P+ Y AG T ++ MEGAV +G+ A+ ++ + + R Q + P + + Sbjct: 417 REPVGRLYFAGTETATEWSGYMEGAVQAGERAAREVMYE---MGRIPQSQIWQTEPESVE 473 Query: 157 L*IVRAIRFFVAF 119 V A+ F F Sbjct: 474 ---VPALPFVTTF 483
>AOFA_HORSE (Q5NU32) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIV 227 R P+ Y AG T ++ MEGAV +G+ A+ I+ Sbjct: 424 RQPVGRIYFAGTETATRWSGYMEGAVEAGERAAREIL 460
>AOFA_BOVIN (P21398) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -1 Query: 337 RSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDSKMLSRR 200 R P+ Y AG T ++ MEGAV +G+ A+ ++ LS + Sbjct: 424 RQPVGRIYFAGTETATQWSGYMEGAVEAGERAAREVLNALGKLSAK 469 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,705,993 Number of Sequences: 219361 Number of extensions: 1894089 Number of successful extensions: 4599 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4420 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4590 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)