ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4o21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin Length = 2244 Score = 406 bits (205), Expect = e-110 Identities = 280/305 (91%) Strand = Plus / Minus Query: 110 gcggtgagctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcg 169 ||||||||||||||||||||||| ||||||||||||| ||| || ||||||| ||| | Sbjct: 1959 gcggtgagctcctcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtgg 1900 Query: 170 caggtgagcacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactgg 229 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1899 caggtgagcacccaccctgcctccatctggtcgtcgtcgaggaagctctggtcggactgg 1840 Query: 230 tccagctggccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggag 289 || | || |||||| |||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1839 tcgatctcgccggacaccaacttgccggcgcaggaggagcaggagccggcgcggcaggag 1780 Query: 290 tagggcaggtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacc 349 ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1779 tagggcaggtcgatcccctcctcctcggcctggtcgaggatgtagacgtcatcggggacc 1720 Query: 350 tcgaggtccacctcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcgg 409 || || |||||||||||||| ||||| | |||||||||||||||||||||||| |||||| Sbjct: 1719 tccagctccacctcgccctcgggcgtcaccagcttcaccttgtacgtcgcctgggcgcgg 1660 Query: 410 agcct 414 ||||| Sbjct: 1659 agcct 1655
>gb|AY103722.1| Zea mays PCO142214 mRNA sequence Length = 938 Score = 333 bits (168), Expect = 3e-88 Identities = 270/304 (88%) Strand = Plus / Minus Query: 111 cggtgagctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgc 170 |||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||| || Sbjct: 692 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 633 Query: 171 aggtgagcacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggt 230 ||||||||||||| || || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 632 aggtgagcacccagccggcggcgatctggccgtcgtcgaggtagctctggtcggactggt 573 Query: 231 ccagctggccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagt 290 ||| ||||||||| ||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 572 ccacggagccggagacgaccttgccggcgcaggaggagcaggaccccgcgcggcaggagt 513 Query: 291 agggcaggtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacct 350 ||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 512 agggcaggtcgatgccgtcctcctcggcctggtccaggatgtacacgtcgtcgggcacct 453 Query: 351 cgaggtccacctcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcgga 410 || |||||||| ||||||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 452 gcagctccacctccccctccggcgtgatcagcttcacgttgtaggtggcctgcgcgcgca 393 Query: 411 gcct 414 |||| Sbjct: 392 gcct 389
>gb|M73828.1|MZEFD5 Maize ferredoxin (Fd) isoprotein mRNA, pFD5 Length = 616 Score = 319 bits (161), Expect = 4e-84 Identities = 260/293 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 430 tcctccttgtgtgtctcgatgacgacgtcggaggtggggtacgcaacgcaggtgagcacc 371 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || | ||| |||| |||||||||||||||||||||||||||||| || |||| Sbjct: 370 cagccgtcggcgacctggctgtcgtcgaggaagctctggtcggactggtcgagggagccg 311 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 310 gagacgaccttgccggcgcaggaggagcaggaccccgcgcggcaggagtagggcaggtcg 251 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 || |||||||||||||||| ||| |||||||||||||||||||| |||| || |||||| Sbjct: 250 atgccttcctcctcggcgtagtccaggatgtagacgtcgtcgggcacctgcagctccacc 191 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcggagcct 414 || |||||||||||||| |||||||| ||||| || ||||||||||| ||||| Sbjct: 190 tccccctccggcgtgatgagcttcacgttgtaggtggcctgcgcgcgcagcct 138
>gb|M73830.1|MZEFD1P Maize ferredoxin I (Fd) isoprotein mRNA, pFD1' Length = 757 Score = 317 bits (160), Expect = 2e-83 Identities = 268/304 (88%) Strand = Plus / Minus Query: 111 cggtgagctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgc 170 |||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||| || Sbjct: 533 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 474 Query: 171 aggtgagcacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggt 230 ||||||||||||| || | |||||||| ||||||||||| |||||||||||||||||| Sbjct: 473 aggtgagcacccagccgtcggcgatctggccgtcgtcgaggtagctctggtcggactggt 414 Query: 231 ccagctggccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagt 290 ||| ||||||||| ||||| |||||||| ||||||||||| || ||||||||||||| Sbjct: 413 ccacggagccggagacgaccttgccggcgcacgaggagcaggaccccgcgcggcaggagt 354 Query: 291 agggcaggtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacct 350 ||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 353 agggcaggtcgatgccgtcctcctcggcctggtccaggatgtacacgtcgtcgggcacct 294 Query: 351 cgaggtccacctcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcgga 410 || |||||||| ||||||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 293 gcagctccacctccccctccggcgtgatcagcttcacgttgtaggtggcctgcgcgcgca 234 Query: 411 gcct 414 |||| Sbjct: 233 gcct 230
>gb|M73829.1|MZEFD1 Maize ferredoxin I (Fd) isoprotein mRNA, pFD1 Length = 684 Score = 309 bits (156), Expect = 4e-81 Identities = 267/304 (87%) Strand = Plus / Minus Query: 111 cggtgagctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgc 170 |||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||| || Sbjct: 483 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 424 Query: 171 aggtgagcacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggt 230 ||||||||||||| || | |||||||| ||||||||||| |||||||||||||||||| Sbjct: 423 aggtgagcacccagccgtcggcgatctggccgtcgtcgaggtagctctggtcggactggt 364 Query: 231 ccagctggccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagt 290 ||| ||||||||| ||||| |||||||| ||||||||||| || ||||||||||||| Sbjct: 363 ccacggagccggagacgaccttgccggcgcacgaggagcaggaccccgcgcggcaggagt 304 Query: 291 agggcaggtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacct 350 ||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 303 agggcaggtcgatgccgtcctcctcggcctggtccaggatgtacacgtcgtcgggcacct 244 Query: 351 cgaggtccacctcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcgga 410 || |||||||| ||||| ||||||||||||||||| ||||| || ||||||||||| | Sbjct: 243 gcagctccacctccccctctggcgtgatcagcttcacgttgtaggtggcctgcgcgcgca 184 Query: 411 gcct 414 |||| Sbjct: 183 gcct 180
>ref|XM_479678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 736 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 489 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 430 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 429 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 370 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 369 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 310 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 309 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 250 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 249 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 208
>ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 737 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 431 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 430 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 371 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 370 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 311 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 310 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 251 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 250 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 209
>ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 737 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 431 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 430 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 371 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 370 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 311 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 310 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 251 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 250 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 209
>ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 848 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 432 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 431 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 372 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 371 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 312 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 311 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 252 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 251 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 210
>gb|AY072818.1| Oryza sativa anti-disease protein 1 (ADI1) mRNA, complete cds Length = 729 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 466 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 407 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 406 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 347 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 346 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 287 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 286 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 227 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 226 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 185
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 235792 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 235851 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 235852 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 235911 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 235912 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 235971 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 235972 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 236031 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 236032 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 236073
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 2218 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 2277 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 2278 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 2337 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 2338 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 2397 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 2398 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 2457 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 2458 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 2499
>dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A06, full insert sequence Length = 848 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 432 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 431 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 372 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 371 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 312 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 311 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 252 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 251 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 210
>dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E09, full insert sequence Length = 736 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 489 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 430 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 429 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 370 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 369 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 310 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 309 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 250 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 249 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 208
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 432 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 431 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 372 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 371 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 312 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 311 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 252 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 251 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 210
>dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D12, full insert sequence Length = 746 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 499 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 440 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 439 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 380 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 379 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 320 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 319 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 260 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 259 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 218
>dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA for ferredoxin, complete cds Length = 755 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 484 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 425 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 424 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 365 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 364 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 305 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||||| |||||||| |||||||| || |||| || |||||| Sbjct: 304 atcccttcctcctccgcctggtccaggatgtacacgtcgtccggcacctgcagctccacc 245 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 244 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 203
>dbj|AB016810.1| Zea mays mRNA for ferredoxin, complete cds Length = 765 Score = 291 bits (147), Expect = 1e-75 Identities = 252/287 (87%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 469 tcctccttgtgcgtctcgatgacgacgtcggaggtggggtacgcagcgcaggtgagcacc 410 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || | ||| ||||| ||||| |||||||||||||||||||||||| | |||| Sbjct: 409 cagccgtcggcgacctggttgtcgttgaggaagctctggtcggactggtcgacggagccg 350 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||| ||||| |||||||||||||||||||| || |||||||||||| ||||||||||| Sbjct: 349 gagacgaccttgccggcgcaggaggagcaggaccccgcgcggcaggagaagggcaggtcg 290 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 || ||||||||||||||| ||| || ||||||||||||||||| |||| || |||||| Sbjct: 289 atgccttcctcctcggcgaagtccagtatgtagacgtcgtcgggcacctgcagctccacc 230 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcg 408 || ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 229 tccccctccggcgtgatcagcttcacgttgtaggtggcctgcgcgcg 183
>dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C09, full insert sequence Length = 737 Score = 289 bits (146), Expect = 4e-75 Identities = 248/282 (87%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| ||||||||||||| ||| || ||||||| ||| ||||||||| ||| Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtgaggacc 431 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 || || || | | |||||||||||||||||||||||||||||||||||| | || |||| Sbjct: 430 cagccggcggcaacctggtcgtcgtcgaggaagctctggtcggactggtcgatctcgccg 371 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 370 gagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcaggtcg 311 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 |||||||||||||| || ||| | |||||||| |||||||| || |||| || |||||| Sbjct: 310 atcccttcctcctccgcctggcccaggatgtacacgtcgtccggcacctgcagctccacc 251 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 250 tcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 209
>gb|AY108480.1| Zea mays PCO090770 mRNA sequence Length = 737 Score = 208 bits (105), Expect = 1e-50 Identities = 246/293 (83%) Strand = Plus / Minus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcacc 181 ||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||| Sbjct: 560 tcctccttgtgcgtctggatgacgaggtccgaggtggggtaggcgatgcaggtgagcaca 501 Query: 182 caccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccg 241 | ||| | ||| |||||||||||||||||||||||||||| |||||| | |||| Sbjct: 500 aagccctcggcgacctggtcgtcgtcgaggaagctctggtcgaactggttgacggagccg 441 Query: 242 gagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcg 301 ||||| | ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 440 gagacgatcttgccgacgcaggaggagcaggcgccggcgcggcaggagtagggcaggtcc 381 Query: 302 atcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtccacc 361 | |||| |||||||| ||||| ||||||||||||||| |||| | || ||| | ||| Sbjct: 380 aaccctcgttcctcggcatggtccaggatgtagacgtcgccgggcatcttgagctgtacc 321 Query: 362 tcgccctccggcgtgatcagcttcaccttgtacgtcgcctgcgcgcggagcct 414 || || ||||||||||| ||||| || |||| || ||||||||||| ||||| Sbjct: 320 tccccgtccggcgtgatgagcttgacgttgtgggtggcctgcgcgcgcagcct 268
>gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds Length = 849 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 368 gccggagaccaccttgccggcgcaggaggagcaggagcccgcgcggcaggagtaaggcag 309 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgaggtc 357 |||||||||||||||||| || ||||| |||||| | |||| ||| || |||| || || Sbjct: 308 gtcgatcccttcctcctccgcctggtccaggatgaacacgttgtccggcacctgcagttc 249 Query: 358 cacctcgccctccggcgtgatcagcttcaccttgtacgtcgcctgc 403 ||||||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 248 cacctcgccgtccggtgtgatcagcttcacgttgtacgtcgcctgc 203
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 152 gaggtggggtacgcggcgcaggtgagcacccaccccgcctcgatctggtcgtcgtcgagg 211 ||||||||||| || ||||||||||||| | || || ||||||||||||||||| ||| Sbjct: 180497 gaggtggggtaagccacgcaggtgagcacgaaaccggcttcgatctggtcgtcgtccagg 180438 Query: 212 aagctctggtcggactg 228 ||||||||||||||||| Sbjct: 180437 aagctctggtcggactg 180421 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgat 303 |||||||||| |||||| | ||| |||||||||||||||||||||||||| Sbjct: 180395 ccggcgcaggtggagcaagcgccagcgcggcaggagtagggcaggtcgat 180346
>gb|AY826848.1| Heterocapsa triquetra clone HTF2 chloroplast ferredoxin mRNA, complete cds; nuclear gene for chloroplast product Length = 650 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatccct 307 ||||| || |||||| |||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 367 accttgcccgcgcagctggagcaggagcccgcgcggcaggagtaaggcagctcgataccc 308 Query: 308 tcctcctcggcgtggtcgaggatgtagac 336 ||||||||||| ||||| || |||||||| Sbjct: 307 tcctcctcggcctggtccagaatgtagac 279
>gb|AY826847.1| Heterocapsa triquetra clone HTF1 chloroplast ferredoxin mRNA, complete cds; nuclear gene for chloroplast product Length = 622 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatccct 307 ||||| || |||||| |||||||||||| |||||||||||||||||||| ||||| || Sbjct: 381 accttgcccgcgcagctggagcaggagcccgcgcggcaggagtagggcagctcgataccc 322 Query: 308 tcctcctcggcgtggtcgaggatgtagac 336 |||||||| || ||||| | ||||||||| Sbjct: 321 tcctcctctgcttggtccaagatgtagac 293
>ref|XM_472400.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 459 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Minus Query: 123 cctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcaccc 182 |||||||||| |||| ||||||| || | ||| ||||||||| ||||||||||||| Sbjct: 445 cctccttgtgcgtctggatgacgctgttggcggtcgggtacgcgacgcaggtgagcacgt 386 Query: 183 accccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccgg 242 | || || ||| |||| ||||||||||||| |||||| |||||||| | ||| Sbjct: 385 agccggcgccgacctgggcgtcgtcgaggaacgactggtccgactggtcgacgccgccct 326 Query: 243 agaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 ||| ||||| |||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 325 cgacgaccttgccggcgcaggtggagcacgcgccggcgcggcacgagtagggcaggtcga 266
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Minus Query: 123 cctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcaccc 182 |||||||||| |||| ||||||| || | ||| ||||||||| ||||||||||||| Sbjct: 108654 cctccttgtgcgtctggatgacgctgttggcggtcgggtacgcgacgcaggtgagcacgt 108595 Query: 183 accccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccgg 242 | || || ||| |||| ||||||||||||| |||||| |||||||| | ||| Sbjct: 108594 agccggcgccgacctgggcgtcgtcgaggaacgactggtccgactggtcgacgccgccct 108535 Query: 243 agaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 ||| ||||| |||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 108534 cgacgaccttgccggcgcaggtggagcacgcgccggcgcggcacgagtagggcaggtcga 108475
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Minus Query: 123 cctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcaccc 182 |||||||||| |||| ||||||| || | ||| ||||||||| ||||||||||||| Sbjct: 20378021 cctccttgtgcgtctggatgacgctgttggcggtcgggtacgcgacgcaggtgagcacgt 20377962 Query: 183 accccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccgg 242 | || || ||| |||| ||||||||||||| |||||| |||||||| | ||| Sbjct: 20377961 agccggcgccgacctgggcgtcgtcgaggaacgactggtccgactggtcgacgccgccct 20377902 Query: 243 agaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 ||| ||||| |||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 20377901 cgacgaccttgccggcgcaggtggagcacgcgccggcgcggcacgagtagggcaggtcga 20377842 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 35479327 ggagcaggagccggcacggcagga 35479350
>gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 764 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 247 caccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatccc 306 |||||| || ||||||| ||||||| ||| |||||||| ||||| ||||||||||| || Sbjct: 267 caccttgcccgcgcaggtcgagcaggcgcccgcgcggcacgagtacggcaggtcgatgcc 208 Query: 307 ttcctcctcggcgtggtcgaggatgtag 334 ||||||||||| | ||||||||||||| Sbjct: 207 gtcctcctcggccttgtcgaggatgtag 180 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 115 gagctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggt 174 |||||||||||||||||| ||||||||| | |||||| |||||||||| | | ||||| Sbjct: 400 gagctcctcctccttgtgcgtctcgatggtgcagtccgacgtggggtacgagacacaggt 341 Query: 175 gag 177 ||| Sbjct: 340 gag 338 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 atctggtcgtcgtcgaggaa 213 |||||||||||||||||||| Sbjct: 320 atctggtcgtcgtcgaggaa 301
>dbj|AK120232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H21, full insert sequence Length = 835 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Minus Query: 123 cctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcaccc 182 |||||||||| |||| ||||||| || | ||| ||||||||| ||||||||||||| Sbjct: 640 cctccttgtgcgtctggatgacgctgttggcggtcgggtacgcgacgcaggtgagcacgt 581 Query: 183 accccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccgg 242 | || || ||| |||| ||||||||||||| |||||| |||||||| | ||| Sbjct: 580 agccggcgccgacctgggcgtcgtcgaggaacgactggtccgactggtcgacgccgccct 521 Query: 243 agaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 ||| ||||| |||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 520 cgacgaccttgccggcgcaggtggagcacgcgccggcgcggcacgagtagggcaggtcga 461
>dbj|AK062016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F06, full insert sequence Length = 752 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Minus Query: 123 cctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagcaccc 182 |||||||||| |||| ||||||| || | ||| ||||||||| ||||||||||||| Sbjct: 603 cctccttgtgcgtctggatgacgctgttggcggtcgggtacgcgacgcaggtgagcacgt 544 Query: 183 accccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctggccgg 242 | || || ||| |||| ||||||||||||| |||||| |||||||| | ||| Sbjct: 543 agccggcgccgacctgggcgtcgtcgaggaacgactggtccgactggtcgacgccgccct 484 Query: 243 agaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 ||| ||||| |||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 483 cgacgaccttgccggcgcaggtggagcacgcgccggcgcggcacgagtagggcaggtcga 424
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 152 gaggtggggtacgcggcgcaggtgagcacccaccccgcctcgatctggtcgtcgtcgagg 211 ||||||||||| || ||||||| ||||| | ||||| |||||||| |||||||| ||| Sbjct: 540554 gaggtggggtaagccacgcaggtcagcacaaagcccgcttcgatctgatcgtcgtccagg 540495 Query: 212 aagctctggtcggactg 228 ||||||||||||||||| Sbjct: 540494 aagctctggtcggactg 540478 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 257 gcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatcccttcctcctcg 316 ||||||| |||||| | ||| |||||||||||||| ||||||||||| |||| ||| || Sbjct: 540449 gcgcaggtggagcaagcgccagcgcggcaggagtaaggcaggtcgatgccttgctcttct 540390 Query: 317 gcgtggtcgaggatgta 333 || |||||||||||| Sbjct: 540389 gctgcgtcgaggatgta 540373
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 4e-10 Identities = 187/237 (78%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgag 177 |||||| |||||||| || | ||||||| |||||| ||||||||| | ||| ||||| Sbjct: 37235199 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggtacgagatgcacgtgag 37235140 Query: 178 cacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctg 237 ||| ||||| ||||||||| |||||| | ||||| | ||| |||||||| | || Sbjct: 37235139 cacgtacccctgctcgatctgctcgtcggccaggaacgacccgtccgactggtcgacctc 37235080 Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||| ||| ||| |||||||| | |||||| |||||||| ||||| ||||| ||||| Sbjct: 37235079 gccggaggccagcttgccggcgcacgtggagcacgagccggcccggcacgagtaaggcag 37235020 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgag 354 || | || ||||||||||| |||||||| |||| ||| ||||| |||||||| Sbjct: 37235019 ctccaggccggcctcctcggcggcgtcgaggacgtaggtgtcctcgggcacctcgag 37234963
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 73.8 bits (37), Expect = 4e-10 Identities = 187/237 (78%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgag 177 |||||| |||||||| || | ||||||| |||||| ||||||||| | ||| ||||| Sbjct: 109855 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggtacgagatgcacgtgag 109796 Query: 178 cacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctg 237 ||| ||||| ||||||||| |||||| | ||||| | ||| |||||||| | || Sbjct: 109795 cacgtacccctgctcgatctgctcgtcggccaggaacgacccgtccgactggtcgacctc 109736 Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||| ||| ||| |||||||| | |||||| |||||||| ||||| ||||| ||||| Sbjct: 109735 gccggaggccagcttgccggcgcacgtggagcacgagccggcccggcacgagtaaggcag 109676 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgag 354 || | || ||||||||||| |||||||| |||| ||| ||||| |||||||| Sbjct: 109675 ctccaggccggcctcctcggcggcgtcgaggacgtaggtgtcctcgggcacctcgag 109619
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 73.8 bits (37), Expect = 4e-10 Identities = 187/237 (78%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgag 177 |||||| |||||||| || | ||||||| |||||| ||||||||| | ||| ||||| Sbjct: 72188 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggtacgagatgcacgtgag 72129 Query: 178 cacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctg 237 ||| ||||| ||||||||| |||||| | ||||| | ||| |||||||| | || Sbjct: 72128 cacgtacccctgctcgatctgctcgtcggccaggaacgacccgtccgactggtcgacctc 72069 Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||| ||| ||| |||||||| | |||||| |||||||| ||||| ||||| ||||| Sbjct: 72068 gccggaggccagcttgccggcgcacgtggagcacgagccggcccggcacgagtaaggcag 72009 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgag 354 || | || ||||||||||| |||||||| |||| ||| ||||| |||||||| Sbjct: 72008 ctccaggccggcctcctcggcggcgtcgaggacgtaggtgtcctcgggcacctcgag 71952
>dbj|AK119310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G06, full insert sequence Length = 3419 Score = 73.8 bits (37), Expect = 4e-10 Identities = 187/237 (78%) Strand = Plus / Plus Query: 118 ctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgag 177 |||||| |||||||| || | ||||||| |||||| ||||||||| | ||| ||||| Sbjct: 396 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggtacgagatgcacgtgag 455 Query: 178 cacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctg 237 ||| ||||| ||||||||| |||||| | ||||| | ||| |||||||| | || Sbjct: 456 cacgtacccctgctcgatctgctcgtcggccaggaacgacccgtccgactggtcgacctc 515 Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||| ||| ||| |||||||| | |||||| |||||||| ||||| ||||| ||||| Sbjct: 516 gccggaggccagcttgccggcgcacgtggagcacgagccggcccggcacgagtaaggcag 575 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgag 354 || | || ||||||||||| |||||||| |||| ||| ||||| |||||||| Sbjct: 576 ctccaggccggcctcctcggcggcgtcgaggacgtaggtgtcctcgggcacctcgag 632
>dbj|AK069860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H08, full insert sequence Length = 911 Score = 73.8 bits (37), Expect = 4e-10 Identities = 187/237 (78%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgag 177 |||||| |||||||| || | ||||||| |||||| ||||||||| | ||| ||||| Sbjct: 785 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggtacgagatgcacgtgag 726 Query: 178 cacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctg 237 ||| ||||| ||||||||| |||||| | ||||| | ||| |||||||| | || Sbjct: 725 cacgtacccctgctcgatctgctcgtcggccaggaacgacccgtccgactggtcgacctc 666 Query: 238 gccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||||| ||| ||| |||||||| | |||||| |||||||| ||||| ||||| ||||| Sbjct: 665 gccggaggccagcttgccggcgcacgtggagcacgagccggcccggcacgagtaaggcag 606 Query: 298 gtcgatcccttcctcctcggcgtggtcgaggatgtagacgtcgtcggggacctcgag 354 || | || ||||||||||| |||||||| |||| ||| ||||| |||||||| Sbjct: 605 ctccaggccggcctcctcggcggcgtcgaggacgtaggtgtcctcgggcacctcgag 549
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 154 ggtggggtacgcggcgcaggtgagcacccaccccgcctcgatctggtcgtcgtcgaggaa 213 ||||||||| ||| ||||||| ||||| | || || ||||||||||||||||| ||||| Sbjct: 1967046 ggtggggtaggcgacgcaggtcagcacgaagccggcttcgatctggtcgtcgtccaggaa 1967105 Query: 214 gctctggtcggactg 228 ||||||||| ||||| Sbjct: 1967106 gctctggtcagactg 1967120 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgat 303 |||||||||| |||||| | || ||||||||||||||||| |||||||| Sbjct: 1967146 ccggcgcaggtggagcaagctccagcgcggcaggagtaggggaggtcgat 1967195 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 cgatctggtcgtcgtcgaggaagctctg 219 ||||||| |||||||| ||||||||||| Sbjct: 1709436 cgatctgttcgtcgtcaaggaagctctg 1709409
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 266 gagcaggagccggcgcggcaggagtagggcaggtcgatccctt 308 ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1432008 gagcaggctccggcgcggcaggagtagggcaggtcgatccctt 1432050
>gb|AY826851.1| Pavlova lutheri clone PLF2 chloroplast ferredixon mRNA, partial cds; nuclear gene for chloroplast product Length = 736 Score = 69.9 bits (35), Expect = 7e-09 Identities = 170/215 (79%) Strand = Plus / Minus Query: 119 tcctcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagc 178 |||||||||||||| |||||||| | ||||||| | |||||||| |||| || || Sbjct: 406 tcctcctccttgtgcgtctcgatcgtgcagtccgagctcgggtacgccacgcacgtcagg 347 Query: 179 acccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtccagctgg 238 || | |||| ||| |||||| ||||||||||||| ||||||||||||||| | | Sbjct: 346 acgaagcccgactccatctggccgtcgtcgaggaacgactggtcggactggtcgacggtg 287 Query: 239 ccggagaccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcagg 298 ||||| | ||||| ||| ||||| |||||| | |||||||||||| ||||| || ||| Sbjct: 286 ccggacgcgaccttgccgcagcaggtggagcacgcgccggcgcggcacgagtacgggagg 227 Query: 299 tcgatcccttcctcctcggcgtggtcgaggatgta 333 || || || |||||||| || | |||||||||||| Sbjct: 226 tcaatgccctcctcctccgccttgtcgaggatgta 192
>gb|AY107646.1| Zea mays PCO072676 mRNA sequence Length = 941 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 252 tcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 |||||||||||| ||||||||| ||||||||||||||| ||||||| Sbjct: 481 tcccggcgcaggtggagcaggacccggcgcggcaggagaagggcag 436
>dbj|AB001386.1| Maize DNA for Fd VI, complete cds Length = 2351 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 252 tcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 |||||||||||| ||||||||| ||||||||||||||| ||||||| Sbjct: 1905 tcccggcgcaggtggagcaggacccggcgcggcaggagaagggcag 1860
>dbj|AB001385.1| Maize mRNA for Fd VI, complete cds Length = 845 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 252 tcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 |||||||||||| ||||||||| ||||||||||||||| ||||||| Sbjct: 479 tcccggcgcaggtggagcaggacccggcgcggcaggagaagggcag 434
>gb|AY111751.1| Zea mays CL56157_1 mRNA sequence Length = 424 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 |||||||| | |||||| | ||||||||||||||||||||||||||||| Sbjct: 299 ccggcgcacgtggagcacgcgccggcgcggcaggagtagggcaggtcga 347 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 122 tcctccttgtgtgtctcgatgacgaggtccgaggtggggtacgcggcgcaggtgagc 178 |||||| |||| |||| ||||||| ||| || || ||||||||| ||||||||||| Sbjct: 167 tcctccctgtgcgtctggatgacgcagtcggacgtcgggtacgcgacgcaggtgagc 223
>gb|AY616100.1| Prototheca wickerhamii plastid ferroredoxin-like mRNA, partial sequence Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 194 atctggtcgtcgtcgaggaagctctggtcggactggtccagctggccggagaccaccttc 253 |||||| ||||||| ||||||||||| ||| ||| ||||||| || || || |||||| Sbjct: 405 atctgggcgtcgtctaggaagctctgatcgctctgatccagctcaccagacacaaccttc 346 Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcga 302 || |||||| |||||||| || | ||||||||||||||| ||||||| Sbjct: 345 ccaacgcaggtggagcaggtcccagagcggcaggagtagggtaggtcga 297
>gb|AY826850.1| Isochrysis galbana clone ISF2 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 582 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatccct 307 ||||| || ||||||| ||||||| |||||| || || ||||| |||||||| || ||| Sbjct: 262 accttgcccgcgcaggtcgagcaggcgccggcacgacacgagtatggcaggtcaattcct 203 Query: 308 tcctcctcggcgtggtcgaggatgta 333 |||||||| || | |||||||||||| Sbjct: 202 tcctcctcagccttgtcgaggatgta 177 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 119 tcctcctccttgtgtgtctcgat 141 ||||||||||||||||||||||| Sbjct: 391 tcctcctccttgtgtgtctcgat 369
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 cgatctggtcgtcgtcgaggaagctctggtcggactggtc 231 ||||||| |||||||| |||||||||||||||| |||||| Sbjct: 288603 cgatctgatcgtcgtccaggaagctctggtcggtctggtc 288642 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Plus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 ||||| ||||| |||| |||||||| || || ||||||||||||||||| Sbjct: 288659 accttgccggcacaggtggagcaggctccagctcggcaggagtagggcag 288708
>gb|AF003125.1|AF003125 Mesembryanthemum crystallinum ferredoxin I precursor mRNA, complete cds Length = 656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 247 caccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtcgatccc 306 ||||||||||||||| || || || || ||||| || || ||||| ||||| || || || Sbjct: 368 caccttcccggcgcaagacgaacacgacccggcacgacacgagtatggcagatcaatgcc 309 Query: 307 ttcctcctcggcgtggtcgaggatgtagacgtcgtcggg 345 ||||||||||| ||||||||||||||| || ||||| Sbjct: 308 ggcctcctcggcggcgtcgaggatgtagacatcatcggg 270
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 275 ccggcgcggcaggagtagggcaggtcgatccctt 308 |||||||||||||| |||||||| |||||||||| Sbjct: 1673026 ccggcgcggcaggaatagggcagctcgatccctt 1672993
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 256 ggcgcaggaggagcaggagccggcg 280 ||||||||||||||||||||||||| Sbjct: 1902583 ggcgcaggaggagcaggagccggcg 1902559
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 245 accaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtc 300 |||| ||| ||||| |||| ||||||| ||| |||||||||||| |||||||||| Sbjct: 3822189 accatcttgccggcacaggtcgagcaggcgcccgcgcggcaggagaagggcaggtc 3822134
>gb|AY189833.1| Helianthus annuus ferredoxin (FER1) mRNA, complete cds Length = 571 Score = 46.1 bits (23), Expect = 0.095 Identities = 50/59 (84%) Strand = Plus / Minus Query: 173 gtgagcacccaccccgcctcgatctggtcgtcgtcgaggaagctctggtcggactggtc 231 |||||||||||||| || || |||||||| || || || || |||||||| |||||||| Sbjct: 378 gtgagcacccacccagcttcaatctggtcatcatcaagaaaactctggtcagactggtc 320 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtctcgat 141 ||||||||||||||| |||||||| Sbjct: 433 ctcctcctccttgtgggtctcgat 410
>emb|Y12734.1|PPFERREDO P.patens mRNA for ferredoxin Length = 888 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Minus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtc 300 |||||||| |||||||| | ||||| ||||||||||| |||||||| Sbjct: 444 ccggcgcaagaggagcaagctccggcacggcaggagtaaggcaggtc 398
>gb|DQ122892.1| Chlamydomonas incerta chloroplast ferredoxin (PetF) mRNA, complete cds; nuclear gene for chloroplast product Length = 619 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Minus Query: 246 ccaccttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtc 300 ||||||| ||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 274 ccaccttgccggcgcagctggagcaagcaccagcgcggcaagagtagggcaggtc 220
>gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and PtxS (ptxS) genes, complete cds and ketogluconate utilization operon gene, complete sequence Length = 7447 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 cttcctcctcggcgtggtcgagg 328 ||||||||||||||||||||||| Sbjct: 5356 cttcctcctcggcgtggtcgagg 5378
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 190 ctcgatctggtcgtcgtcgaggaagct 216 |||||||| |||||||||||||||||| Sbjct: 25527914 ctcgatctcgtcgtcgtcgaggaagct 25527888 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 |||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 8467183 ccggcgcaggtggagcaatccccggcgcggcacgagtagggcag 8467226
>gb|AE004652.1| Pseudomonas aeruginosa PAO1, section 213 of 529 of the complete genome Length = 11558 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 cttcctcctcggcgtggtcgagg 328 ||||||||||||||||||||||| Sbjct: 2181 cttcctcctcggcgtggtcgagg 2203
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 190 ctcgatctggtcgtcgtcgaggaagct 216 |||||||| |||||||||||||||||| Sbjct: 65184 ctcgatctcgtcgtcgtcgaggaagct 65158
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 200 tcgtcgtcgaggaagctctggtcggactggtcca 233 ||||| |||||||||||||| || |||||||||| Sbjct: 122720 tcgtcatcgaggaagctctgatcagactggtcca 122753
>ref|NM_015576.1| Homo sapiens CAZ-associated structural protein (CAST1), mRNA Length = 6138 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggcgc 281 |||||||||||||||||||||| Sbjct: 44 caggaggagcaggagccggcgc 23
>gb|AE011784.1| Xanthomonas axonopodis pv. citri str. 306, section 162 of 469 of the complete genome Length = 13803 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 gtacgtcgcctgcgcgcggagc 412 |||||||||||||||||||||| Sbjct: 364 gtacgtcgcctgcgcgcggagc 385
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggtgagctcctcctccttgtgt 133 |||||||||||||||||||||| Sbjct: 4036890 ggtgagctcctcctccttgtgt 4036911
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggtgagctcctcctccttgtgt 133 |||||||||||||||||||||| Sbjct: 80545 ggtgagctcctcctccttgtgt 80566
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggtgagctcctcctccttgtgt 133 |||||||||||||||||||||| Sbjct: 142766 ggtgagctcctcctccttgtgt 142787
>dbj|AK100878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C21, full insert sequence Length = 3241 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ggtgagctcctcctccttgtgt 133 |||||||||||||||||||||| Sbjct: 2821 ggtgagctcctcctccttgtgt 2800
>gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, complete sequence Length = 217346 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcgc 281 |||||||||||||||||||||| Sbjct: 72242 caggaggagcaggagccggcgc 72263
>dbj|AB002376.2| Human mRNA for KIAA0378 gene, partial cds Length = 6137 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggcgc 281 |||||||||||||||||||||| Sbjct: 44 caggaggagcaggagccggcgc 23
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 tcctcggcgtggtcgaggatgtaga 335 |||||||| |||||||||||||||| Sbjct: 62263 tcctcggcatggtcgaggatgtaga 62239
>emb|Z46944.1|CSNPHFDXN C.sinensis mRNA for non-photosynthetic ferredoxin Length = 690 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 gcgcggcaggagtagggcaggtcga 302 ||||||||||| ||||||||||||| Sbjct: 363 gcgcggcaggaatagggcaggtcga 339
>gb|AC010032.10| Drosophila melanogaster 3L BAC RP98-2N23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 192399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 157415 caggaggagcaggagccggcg 157395
>gb|AC091127.3| Drosophila melanogaster 3L BAC RP98-27E18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177835 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 74924 caggaggagcaggagccggcg 74904
>ref|NM_206228.1| Drosophila melanogaster trio CG18214-RF, transcript variant F (trio), mRNA Length = 2961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 763 caggaggagcaggagccggcg 783
>ref|NM_167849.1| Drosophila melanogaster trio CG18214-RB, transcript variant B (trio), mRNA Length = 4175 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 747 caggaggagcaggagccggcg 767
>ref|NM_167848.1| Drosophila melanogaster trio CG18214-RD, transcript variant D (trio), mRNA Length = 4908 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 1480 caggaggagcaggagccggcg 1500
>ref|NM_167847.1| Drosophila melanogaster trio CG18214-RC, transcript variant C (trio), mRNA Length = 9514 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 6086 caggaggagcaggagccggcg 6106
>ref|NM_143703.2| Drosophila melanogaster trio CG18214-RA, transcript variant A (trio), mRNA Length = 9249 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 5821 caggaggagcaggagccggcg 5841
>gb|AY070715.1| Drosophila melanogaster SD08659 full length cDNA Length = 2990 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 751 caggaggagcaggagccggcg 771
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 tcgatctggtcgtcgtcgaggaagc 215 |||||| |||||||||||||||||| Sbjct: 3943761 tcgatccggtcgtcgtcgaggaagc 3943785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cgcggcgcaggtgagcaccc 182 |||||||||||||||||||| Sbjct: 251361 cgcggcgcaggtgagcaccc 251342
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 aggagcaggagccggcgcggcagga 288 |||||| |||||||||||||||||| Sbjct: 1126916 aggagccggagccggcgcggcagga 1126892
>gb|AF216663.1|AF216663 Drosophila melanogaster guanine-nucleotide-exchange-factor TRIO (Trio) mRNA, complete cds Length = 8033 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 5818 caggaggagcaggagccggcg 5838
>gb|AF215635.1|AF215635 Drosophila melanogaster Rho family guanine nucleotide exchange factor Trio (Trio) mRNA, complete cds Length = 7967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 5829 caggaggagcaggagccggcg 5849
>dbj|AK119950.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C04, full insert sequence Length = 2055 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 ggatgtagacgtcgtcgggga 347 ||||||||||||||||||||| Sbjct: 390 ggatgtagacgtcgtcgggga 370
>ref|NM_211926.1| Eremothecium gossypii AGR198Cp (AGR198C), mRNA Length = 1548 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 aggagcaggagccggcgcggcagga 288 |||||| |||||||||||||||||| Sbjct: 530 aggagccggagccggcgcggcagga 554
>gb|AE003470.4| Drosophila melanogaster chromosome 3L, section 4 of 83 of the complete sequence Length = 318699 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 89571 caggaggagcaggagccggcg 89551
>gb|BT001377.1| Drosophila melanogaster GH01987 full insert cDNA Length = 3071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 55 caggaggagcaggagccggcg 75
>gb|U29516.1|CRU29516 Chlamydomonas reinhardtii ferredoxin precursor gene, complete cds Length = 989 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtc 300 ||||| ||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 657 accttgccggcgcagctggagcaagcaccagcgcggcaagagtagggcaggtc 605
>gb|L10349.1|CREFERREDO Chlamydomonas reinhardtii ferredoxin mRNA, complete cds Length = 527 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 248 accttcccggcgcaggaggagcaggagccggcgcggcaggagtagggcaggtc 300 ||||| ||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 253 accttgccggcgcagctggagcaagcaccagcgcggcaagagtagggcaggtc 201
>dbj|AB035419.1| Drosophila melanogaster mRNA for Trio, complete cds Length = 9238 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 caggaggagcaggagccggcg 280 ||||||||||||||||||||| Sbjct: 5818 caggaggagcaggagccggcg 5838
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ctcctcctccttgtgtgtct 137 |||||||||||||||||||| Sbjct: 102260 ctcctcctccttgtgtgtct 102241
>ref|XM_474484.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 396 ggagcaggagccggcacggcagga 419
>ref|XM_423873.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9030409G11 (LOC426211), mRNA Length = 1055 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 ggcgcaggaggagcaggagccggcgcgg 283 ||||||| |||||||||||| ||||||| Sbjct: 263 ggcgcagaaggagcaggagctggcgcgg 290
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 103 aattcaagcggtgagctcctcctccttgtgtgtctc 138 |||| |||| || ||||||||||||||||| ||||| Sbjct: 462 aatttaagcagtaagctcctcctccttgtgagtctc 427
>ref|XM_862579.1| PREDICTED: Canis familiaris hypothetical protein LOC610929 (LOC610929), mRNA Length = 996 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggcgcaggaggagcaggagc 275 |||||||||||||||||||| Sbjct: 630 ggcgcaggaggagcaggagc 649
>gb|AC124479.4| Mus musculus BAC clone RP24-113I12 from chromosome 15, complete sequence Length = 161246 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acacaaaatcagtgaattca 108 |||||||||||||||||||| Sbjct: 144370 acacaaaatcagtgaattca 144351
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 acgcggcgcaggtgagcacc 181 |||||||||||||||||||| Sbjct: 1843306 acgcggcgcaggtgagcacc 1843325
>ref|XM_538365.2| PREDICTED: Canis familiaris similar to mannoside acetylglucosaminyltransferase 3 (LOC481244), mRNA Length = 1645 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 314 tcggcgtggtcgaggatgtagacgtcgtcggg 345 ||||||| ||||| |||| ||||||||||||| Sbjct: 974 tcggcgtcgtcgatgatgaagacgtcgtcggg 943
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tcctcggcgtggtcgaggat 330 |||||||||||||||||||| Sbjct: 74573 tcctcggcgtggtcgaggat 74592
>gb|AC125526.4| Mus musculus BAC clone RP24-498L21 from chromosome 15, complete sequence Length = 178670 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acacaaaatcagtgaattca 108 |||||||||||||||||||| Sbjct: 5191 acacaaaatcagtgaattca 5172
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ctcgatctggtcgtcgtcga 209 |||||||||||||||||||| Sbjct: 3096088 ctcgatctggtcgtcgtcga 3096107
>emb|Z75520.1|LESEND33 L.esculentum mRNA for ferredoxin-I Length = 574 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 103 aattcaagcggtgagctcctcctccttgtgtgtctc 138 |||| |||| || ||||||||||||||||| ||||| Sbjct: 461 aatttaagcagtaagctcctcctccttgtgagtctc 426
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 104130 ggagcaggagccggcacggcagga 104153
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ctcgatctggtcgtcgtcga 209 |||||||||||||||||||| Sbjct: 3117399 ctcgatctggtcgtcgtcga 3117418
>gb|DQ360407.1| Chlamydomonas reinhardtii clone 1112084B10 putative ferredoxin (PetF2) mRNA, complete cds Length = 976 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 280 gcggcaggagtagggcaggtcgatcccttcctcctcggcg 319 |||||| |||||||||||||| || || ||||||||||| Sbjct: 281 gcggcacgagtagggcaggtccatgcccgcctcctcggcg 242
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccccgcctcgatctggtcgt 203 |||||||||||||||||||| Sbjct: 1552130 ccccgcctcgatctggtcgt 1552149
>gb|AF479109.1| Begonia metallica x Begonia sanguinea 26S ribosomal RNA gene, complete sequence Length = 3168 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 agacgtcgtcggggacctcg 352 |||||||||||||||||||| Sbjct: 1651 agacgtcgtcggggacctcg 1670
>ref|NM_204131.1| Gallus gallus LIM domain kinase 1 (LIMK1), mRNA Length = 2796 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 gggcaggtcgatcccttcctcctc 315 |||||||||| ||||||||||||| Sbjct: 109 gggcaggtcggtcccttcctcctc 86
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence Length = 201971 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 caggaggagcaggagccggc 279 |||||||||||||||||||| Sbjct: 96686 caggaggagcaggagccggc 96667
>gb|AF260753.1|AF260753 Cricetulus griseus plectin mRNA, partial cds Length = 14618 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 gcaggaggagcaggagccggcgcggcag 286 ||||| |||||||||| ||||||||||| Sbjct: 5667 gcaggcggagcaggaggcggcgcggcag 5694
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gatggaaatacacaaaatca 99 |||||||||||||||||||| Sbjct: 23403 gatggaaatacacaaaatca 23422
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 254 ccggcgcaggaggagcaggagccggcgcggcaggagtagggcag 297 |||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 98776 ccggcgcaggtggagcaatccccggcgcggcacgagtagggcag 98819
>dbj|AK105982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G02, full insert sequence Length = 1113 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 278 ggagcaggagccggcacggcagga 301
>dbj|AK105888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E04, full insert sequence Length = 1058 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 213 ggagcaggagccggcacggcagga 236
>dbj|AK070001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034E19, full insert sequence Length = 950 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggagcaggagccggcgcggcagga 288 ||||||||||||||| |||||||| Sbjct: 214 ggagcaggagccggcacggcagga 237
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 ggtccacctcgccctccggcgtga 377 ||||||| |||||||||||||||| Sbjct: 3515874 ggtccacgtcgccctccggcgtga 3515851
>dbj|AB073752.1| Gallus gallus limk1 mRNA for LIM kinase 1, complete cds Length = 2796 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 gggcaggtcgatcccttcctcctc 315 |||||||||| ||||||||||||| Sbjct: 109 gggcaggtcggtcccttcctcctc 86 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,697,224 Number of Sequences: 3902068 Number of extensions: 3697224 Number of successful extensions: 81644 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 80260 Number of HSP's gapped (non-prelim): 1364 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
