Clone Information

BLAST Search Result

Clone Name	rbaak4p13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CHMP7_BRARE (Q6PBQ2) Protein CHMP7	36	0.070
2	SYS_THEMA (Q9X199) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	33	0.35
3	CHAD_HUMAN (O15335) Chondroadherin precursor (Cartilage leucine-...	33	0.60
4	DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypept...	33	0.60
5	HGPC_HAEIN (Q9X442) Hemoglobin and hemoglobin-haptoglobin-bindin...	32	0.78
6	DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polype...	32	1.0
7	HGPA_HAEIN (Q9ZA21) Hemoglobin and hemoglobin-haptoglobin-bindin...	32	1.3
8	HGBA_HAEIN (Q9KIV2) Hemoglobin-binding protein A precursor	32	1.3
9	MY18A_MOUSE (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containi...	32	1.3
10	CHAD_BOVIN (Q27972) Chondroadherin precursor (Cartilage leucine-...	32	1.3
11	ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7...	31	1.7
12	YOT2_CAEEL (P34648) Hypothetical protein ZK632.2	31	1.7
13	REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonse...	31	2.3
14	HGP2_HAEIN (P44809) Probable hemoglobin and hemoglobin-haptoglob...	31	2.3
15	HGP1_HAEIN (P44795) Probable hemoglobin and hemoglobin-haptoglob...	31	2.3
16	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	30	3.0
17	MUKB_SALTY (Q935S7) Chromosome partition protein mukB (Structura...	30	3.0
18	MUKB_SALTI (Q8Z7Z5) Chromosome partition protein mukB (Structura...	30	3.0
19	MUKB_SALPA (Q5PGG1) Chromosome partition protein mukB (Structura...	30	3.0
20	HGP3_HAEIN (P44836) Probable hemoglobin and hemoglobin-haptoglob...	30	3.0
21	VILI4_ARATH (O65570) Villin-4	30	3.0
22	NFL_HUMAN (P07196) Neurofilament triplet L protein (68 kDa neuro...	30	3.0
23	MUKB_SHIFL (Q7ZAM1) Chromosome partition protein mukB (Structura...	30	3.9
24	MUKB_ECOLI (P22523) Chromosome partition protein mukB (Structura...	30	3.9
25	MUKB_ECOL6 (Q8FJA2) Chromosome partition protein mukB (Structura...	30	3.9
26	MUKB_ECO57 (Q8XDG0) Chromosome partition protein mukB (Structura...	30	3.9
27	RUNX2_MOUSE (Q08775) Runt-related transcription factor 2 (Core-b...	30	3.9
28	YNP1_CAEEL (P34554) Hypothetical protein T05G5.1 precursor	30	5.0
29	SDCG8_HUMAN (Q86SQ7) Serologically defined colon cancer antigen ...	30	5.0
30	RS20_THET8 (P80380) 30S ribosomal protein S20	30	5.0
31	RS20_THET2 (P62661) 30S ribosomal protein S20	29	6.6
32	CCHCR_PANTR (Q8HZ60) Coiled-coil alpha-helical rod protein 1 (Al...	29	6.6
33	CCHCR_PANPA (Q8HZ57) Coiled-coil alpha-helical rod protein 1 (Al...	29	6.6
34	CCHCR_HUMAN (Q8TD31) Coiled-coil alpha-helical rod protein 1 (Al...	29	6.6
35	RL29_MYCGE (P47405) 50S ribosomal protein L29	29	6.6
36	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	29	6.6
37	Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050	29	6.6
38	MMRN2_HUMAN (Q9H8L6) Multimerin-2 precursor (EMILIN-3) (Elastin ...	29	6.6
39	HMG2_DROME (Q24537) High mobility group protein DSP1 (Protein do...	29	6.6
40	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	29	6.6
41	MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containi...	29	6.6
42	HGPB_HAEIN (O87296) Hemoglobin and hemoglobin-haptoglobin-bindin...	29	6.6
43	TRDN_HUMAN (Q13061) Triadin	29	6.6
44	SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like ...	29	6.6
45	ICAL_HUMAN (P20810) Calpastatin (Calpain inhibitor) (Sperm BS-17...	29	6.6
46	ATF4_MOUSE (Q06507) Cyclic AMP-dependent transcription factor AT...	29	8.6
47	TXLNB_CHICK (Q9I969) Beta-taxilin (Muscle-derived protein 77)	29	8.6
48	STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein sta...	29	8.6
49	MOEH_DROME (P46150) Moesin/ezrin/radixin homolog 1 (Ezrin-moesin...	29	8.6
50	STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)	29	8.6
51	PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal prot...	29	8.6
52	TRDN_CANFA (P82179) Triadin	29	8.6
53	HGBB_HAEIN (Q9KIV1) Hemoglobin and hemoglobin-haptoglobin-bindin...	29	8.6

>CHMP7_BRARE (Q6PBQ2) Protein CHMP7|
          Length = 457

 Score = 35.8 bits (81), Expect = 0.070
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
 Frame = -3

Query: 344 QTERSQLEEQIKA-----EKLK--ALTLKREGKQAEALEALRSAKRLEKK 216
           Q     LEE+++A     EK K  A +L +EGK+++AL  LR +KR+EKK
Sbjct: 236 QCSEKLLEERVEALGHEAEKCKQQAKSLLKEGKKSQALRCLRGSKRVEKK 285

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>SYS_THEMA (Q9X199) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 17/62 (27%), Positives = 35/62 (56%)
 Frame = -3

Query: 389 VKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLA 210
           + A+ R T+  T++ ++ R+++ + +         LK+EGK AEA   +   KRL +++ 
Sbjct: 34  IDADWRATITKTNELRSRRNEISKNVAR-------LKKEGKNAEAEALIEEGKRLGEEIK 86

Query: 209 SL 204
           +L
Sbjct: 87  AL 88

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>CHAD_HUMAN (O15335) Chondroadherin precursor (Cartilage leucine-rich protein)|
          Length = 359

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 351 ACSRHGWPCLC----FHRWLQARRLRGQVSCAPADGFQGRH 461
           A + + W C C      RWL+A+  R   +CA    F+G+H
Sbjct: 296 ALTNNPWKCTCQLRGLRRWLEAKASRPDATCASPAKFKGQH 336

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>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
 Frame = -3

Query: 434 SAADLSTQSPSL--QPPVKAEARPTVAATSKAQT--------ERSQLEEQIK--AEKLKA 291
           SA +LS+  PS   Q P+ A   PT A TS            E   L +Q++   EKL+ 
Sbjct: 174 SAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRDQVRDLEEKLET 233

Query: 290 LTLKREGKQAEALEALRSAKRLEK 219
           L LKR   +A+  E  +   +LE+
Sbjct: 234 LRLKRSEDKAKLKELEKHKIQLEQ 257

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>HGPC_HAEIN (Q9X442) Hemoglobin and hemoglobin-haptoglobin-binding protein C|
           precursor
          Length = 1066

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRS 237
           T  P+ QP  +   +PT   T++   + S L EQ++   +   T     K+ +  E   S
Sbjct: 28  TNQPTNQPTNQPTNQPTNQPTNQPTNQDSNLSEQLEQINVSGSTETINVKEKKVGETQIS 87

Query: 236 AKRLEKKLAS 207
           AK+L K+ AS
Sbjct: 88  AKKLAKQQAS 97

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>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1281

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
 Frame = -3

Query: 434 SAADLSTQSPSL--QPPVKAEARPTVAATSKAQT----ERSQLEEQIKA------EKLKA 291
           SA +LS+  PS   Q P+ A   PT A TS          S+ EE ++A      EKL+ 
Sbjct: 174 SAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLET 233

Query: 290 LTLKREGKQAEALEALRSAKRLEK 219
           L LKR   +A+  E  +   +LE+
Sbjct: 234 LRLKRSEDKAKLKELEKHKIQLEQ 257

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>HGPA_HAEIN (Q9ZA21) Hemoglobin and hemoglobin-haptoglobin-binding protein A|
           precursor (Heme-repressible hemoglobin-binding protein)
           (Hgb)
          Length = 1077

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEAL-EALR 240
           T  P+ QP  +   +PT   T++   + S   EQ++   +   T   + K    + E ++
Sbjct: 43  TNQPTNQPTNQPTNQPTNQPTNQPTNQNSNASEQLEQINVSGSTENTDTKAPPKIAETVK 102

Query: 239 SAKRLEKKLA 210
           +AK+LEK+ A
Sbjct: 103 TAKKLEKEQA 112

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>HGBA_HAEIN (Q9KIV2) Hemoglobin-binding protein A precursor|
          Length = 1013

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEAL-EALR 240
           T  P+ QP  +   +PT   T++   + S L EQ++   +   T   + K    + E ++
Sbjct: 32  TNQPTNQPTNQPTNQPTNQPTNQPTNQDSNLSEQLEQINVSGSTENSDSKTPPKIAETVK 91

Query: 239 SAKRLEKKLAS 207
           +AK LE++ A+
Sbjct: 92  TAKTLEREQAN 102

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>MY18A_MOUSE (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)|
            (Molecule associated with JAK3 N-terminus) (MAJN)
          Length = 2035

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
 Frame = -3

Query: 425  DLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEE---------QIKAEKLKALTLKRE 273
            +L  Q+ S+Q   +A+ R  +      QT   ++E          Q   +KLK + ++ E
Sbjct: 1553 ELDEQAGSIQMLEQAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLE 1612

Query: 272  GKQAEALEALRSAKRLEKKLASLS 201
             +  +  +ALR  + LE KL++LS
Sbjct: 1613 EEYEDKQKALREKRELESKLSTLS 1636

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>CHAD_BOVIN (Q27972) Chondroadherin precursor (Cartilage leucine-rich protein)|
           (38 kDa bone protein) [Contains: Chondroadherin minor
           form]
          Length = 361

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +3

Query: 369 WPCLC----FHRWLQARRLRGQVSCAPADGFQGRH 461
           W C C      RWL+A+  R   +CA    F+G+H
Sbjct: 304 WKCTCQLRGLRRWLEAKTSRPDATCASPAKFRGQH 338

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>ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 990

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
 Frame = -3

Query: 458 SALKSIGWSAADLSTQSPSLQPPVKA-------EARPTVAATSKAQT 339
           S +K +  S+ + STQ P +QPPV         E+R T  A+ KA T
Sbjct: 368 SGIKHVSVSSIEASTQQPGVQPPVSTATSPPALESRSTQEASPKAIT 414

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>YOT2_CAEEL (P34648) Hypothetical protein ZK632.2|
          Length = 710

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
 Frame = -3

Query: 512 STEASDAFVEDLIDPQMMSALKSIGWSAADLSTQSPSLQPP------VKAEARPTVAATS 351
           ST+A +   E  + P  +    +    ++++    P++  P      V  E     A  S
Sbjct: 560 STKAVEVEHEKKMTPLKVEKEIAASLDSSEIKNSLPAVDEPSSVKDEVSEETPQKEAFGS 619

Query: 350 KAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKR--LEKKLA 210
           K Q   +Q EE+++AEK +    ++   + EA + ++  +R  +EKK+A
Sbjct: 620 KVQKRVAQWEEELEAEKEELAKKQKLEAEEEAKKKVQRVRRRDIEKKIA 668

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>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA|
           reducing factor 3B) (Up-frameshift suppressor 3 homolog
           B) (hUpf3B) (hUpf3p-X)
          Length = 483

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/36 (44%), Positives = 27/36 (75%)
 Frame = -3

Query: 323 EEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKK 216
           EE++K EK    TL+ +GK+AE+ E++ S+++ EKK
Sbjct: 390 EEEMKKEKD---TLRDKGKKAESTESIGSSEKTEKK 422

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>HGP2_HAEIN (P44809) Probable hemoglobin and hemoglobin-haptoglobin-binding|
           protein 2 precursor
          Length = 999

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = -3

Query: 440 GWSAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQA 261
           G + A   T  P+ QP  +   +PT   T++   + S + EQ++   +   T   + K  
Sbjct: 20  GVAYAAQPTNQPTNQPTNQPTNQPTNQPTNQPTNQNSNVSEQLEQINVSGSTENSDTKTP 79

Query: 260 EAL-EALRSAKRLEKKLAS 207
             + E +++AK LE++ A+
Sbjct: 80  PKIAETVKTAKTLEREQAN 98

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>HGP1_HAEIN (P44795) Probable hemoglobin and hemoglobin-haptoglobin-binding|
           protein 1 precursor
          Length = 1063

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRS 237
           T  P+ QP  +   +PT   T++   + S + EQ++   +   +     K+ +  E   S
Sbjct: 28  TNQPTNQPTNQPTNQPTNQPTNQPTNQNSNVSEQLEQINVSGSSENINVKEKKVGETQIS 87

Query: 236 AKRLEKKLAS 207
           AK+L K+ AS
Sbjct: 88  AKKLAKQQAS 97

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = -3

Query: 413  QSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSA 234
            +SP  + P KAE +P      K+ T++ +  E+  AE++K+ T K +  +  A E  +S 
Sbjct: 1720 KSPKEKSPEKAEEKP------KSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSP 1773

Query: 233  KRLE 222
             + E
Sbjct: 1774 TKKE 1777

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>MUKB_SALTY (Q935S7) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1488

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARIASLS 570

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>MUKB_SALTI (Q8Z7Z5) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1488

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARIASLS 570

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>MUKB_SALPA (Q5PGG1) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1488

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARIASLS 570

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>HGP3_HAEIN (P44836) Probable hemoglobin and hemoglobin-haptoglobin-binding|
           protein 3 precursor
          Length = 1084

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRS 237
           T  P+ QP  +   +PT   T++   + S + EQ++   +   +     K+ +  E   S
Sbjct: 48  TNQPTNQPTNQPTNQPTNQPTNQPTNQNSNVSEQLEQINVSGSSENINIKEKKVGETQIS 107

Query: 236 AKRLEKKLAS 207
           AK+L K+ AS
Sbjct: 108 AKKLAKQQAS 117

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>VILI4_ARATH (O65570) Villin-4|
          Length = 974

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
 Frame = -3

Query: 458  SALKSIGWSAADLSTQSPSLQPPVKAEAR----PTVAATSKAQTERSQ--LEEQIKAEKL 297
            SA+ S       +  Q PS+  PVKA  +    P   + SK Q E+ +   EE   + ++
Sbjct: 834  SAIASRSALFEKIPPQEPSIPKPVKASPKTPESPAPESNSKEQEEKKENDKEEGSMSSRI 893

Query: 296  KALTLKREGKQ 264
            ++LT++ + K+
Sbjct: 894  ESLTIQEDAKE 904

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>NFL_HUMAN (P07196) Neurofilament triplet L protein (68 kDa neurofilament|
           protein) (Neurofilament light polypeptide) (NF-L)
          Length = 542

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 398 QPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEK 219
           +PP + EA        +A+ E +  EE+   E+ +    + EG + E  E  + A+  EK
Sbjct: 468 EPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGEEGEETKEAEEEEK 527

Query: 218 KL 213
           K+
Sbjct: 528 KV 529

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>MUKB_SHIFL (Q7ZAM1) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1486

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLS 570

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>MUKB_ECOLI (P22523) Chromosome partition protein mukB (Structural maintenance|
           of chromosome related protein)
          Length = 1486

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLS 570

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>MUKB_ECOL6 (Q8FJA2) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1486

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLS 570

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>MUKB_ECO57 (Q8XDG0) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1486

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 329 QLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASLS 201
           +L EQ +AE+L A   KR+GK  +  E     + LE ++ASLS
Sbjct: 528 RLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLS 570

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>RUNX2_MOUSE (Q08775) Runt-related transcription factor 2 (Core-binding factor,|
           alpha 1 subunit) (CBF-alpha 1) (Acute myeloid leukemia 3
           protein) (Oncogene AML-3) (Polyomavirus enhancer-binding
           protein 2 alpha A subunit) (PEBP2-alpha A) (PEA2-alpha
           A) (SL
          Length = 607

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = -3

Query: 419 STQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALR 240
           S  S SLQP   ++  P VAA  + Q ++ Q ++Q + ++ +    +++ + A A  A  
Sbjct: 107 SPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAA 166

Query: 239 SA 234
           +A
Sbjct: 167 AA 168

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>YNP1_CAEEL (P34554) Hypothetical protein T05G5.1 precursor|
          Length = 411

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -3

Query: 344 QTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKL 213
           + ERSQ+EE+ + E+ + L  +RE  +A   +  R  +  EK++
Sbjct: 178 EAERSQIEERRREEESRRLAAQRETDEARVRDEERRRQETEKEV 221

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>SDCG8_HUMAN (Q86SQ7) Serologically defined colon cancer antigen 8 (Centrosomal|
           colon cancer autoantigen protein) (hCCCAP) (Antigen
           NY-CO-8)
          Length = 713

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -3

Query: 464 MMSALKSIGWSAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALT 285
           +MSAL S+  S AD   +  S    VK               +  Q+ E+   EK KAL 
Sbjct: 315 LMSALVSVRSSLADTQQREASAYEQVK---------------QVLQISEEANFEKTKALI 359

Query: 284 LKREGKQAEAL--EALRSAKRLEKKLAS 207
                 Q + L  E  R A+RLEK+LAS
Sbjct: 360 ------QCDQLRKELERQAERLEKELAS 381

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>RS20_THET8 (P80380) 30S ribosomal protein S20|
          Length = 105

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 350 KAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLA 210
           K +      +  IK    KA+ L +EGK  EAL+ +R A+ L  K A
Sbjct: 20  KRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAA 66

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>RS20_THET2 (P62661) 30S ribosomal protein S20|
          Length = 105

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 350 KAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLA 210
           K +      +  IK    KA+ L +EGK  EAL+ +R A+ L  K A
Sbjct: 20  KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAA 66

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>CCHCR_PANTR (Q8HZ60) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
 Frame = -3

Query: 386 KAEARPTVAATSKAQTERSQLEE----------QIKAEKLKALTLKREGKQAEALEALRS 237
           +AEA    AA + A+  R  LEE          ++  E+L +LT   E    EAL +L S
Sbjct: 140 RAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHE----EALSSLTS 195

Query: 236 -AKRLEKKLASL 204
            A+ LEK L+SL
Sbjct: 196 KAEGLEKSLSSL 207

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>CCHCR_PANPA (Q8HZ57) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
 Frame = -3

Query: 386 KAEARPTVAATSKAQTERSQLEE----------QIKAEKLKALTLKREGKQAEALEALRS 237
           +AEA    AA + A+  R  LEE          ++  E+L +LT   E    EAL +L S
Sbjct: 140 RAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHE----EALSSLTS 195

Query: 236 -AKRLEKKLASL 204
            A+ LEK L+SL
Sbjct: 196 KAEGLEKSLSSL 207

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>CCHCR_HUMAN (Q8TD31) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein) (Putative gene 8 protein) (Pg8)
          Length = 782

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
 Frame = -3

Query: 386 KAEARPTVAATSKAQTERSQLEE----------QIKAEKLKALTLKREGKQAEALEALRS 237
           +AEA    AA + A+  R  LEE          ++  E+L +LT   E    EAL +L S
Sbjct: 140 RAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHE----EALSSLTS 195

Query: 236 -AKRLEKKLASL 204
            A+ LEK L+SL
Sbjct: 196 KAEGLEKSLSSL 207

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>RL29_MYCGE (P47405) 50S ribosomal protein L29|
          Length = 200

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
 Frame = -3

Query: 422 LSTQSPSLQPPVKAEARPTVAA--TSKAQTERSQL----EEQIKAE---KLKALTLKREG 270
           LST+  S Q   KAE +P V +   SK +T+++++    +E  K E   K++   LK+E 
Sbjct: 91  LSTKPESKQETKKAEVKPKVESKPESKQETKKAEVKPLKQETKKVEVKPKVEPKPLKQET 150

Query: 269 KQAEA 255
           K+ EA
Sbjct: 151 KKVEA 155

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
 Frame = -3

Query: 422 LSTQSPSLQPPVKAEARPTV------------AATSKAQTERSQ----LEEQIKA--EKL 297
           ++  SP++ PP K  A P+             ++T  ++ ER+Q    L+EQ+KA  E+L
Sbjct: 467 VTVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQL 526

Query: 296 KALTLKREGKQAEALEALRSAKRLEK 219
            AL+  ++ K  +  E  +  K+ EK
Sbjct: 527 AALSQPQQNKPKKK-EKDKKEKKKEK 551

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>Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050|
          Length = 612

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 350 KAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKK 216
           K + E+ + +E+ K EK K    K+E K+ E  E  +  K+ EKK
Sbjct: 328 KRKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEEKKEEKK 372

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>MMRN2_HUMAN (Q9H8L6) Multimerin-2 precursor (EMILIN-3) (Elastin microfibril|
           interface located protein 3) (Elastin microfibril
           interfacer 3) (EndoGlyx-1 p125/p140 subunit)
          Length = 949

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -3

Query: 386 KAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEA--LRSAKRLEKKL 213
           KAE     AATS+ +++   L++++ A K  A   + E +Q  +  A  L  A R E  L
Sbjct: 551 KAEGERARAATSRLRSQVQALDDEVGALKAAAAEARHEVRQLHSAFAALLEDALRHEAVL 610

Query: 212 ASL 204
           A+L
Sbjct: 611 AAL 613

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>HMG2_DROME (Q24537) High mobility group protein DSP1 (Protein dorsal switch 1)|
          Length = 393

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -3

Query: 434 SAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQ 315
           ++  ++  +PS+Q  ++A+A+      + AQ +  QLEEQ
Sbjct: 340 TSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQ 379

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
 Frame = -3

Query: 422 LSTQSPSLQPPVKAEARPTV------------AATSKAQTERSQ----LEEQIKA--EKL 297
           ++  SP++ PP K  A P+             ++T  ++ ER+Q    L+EQ+KA  E+L
Sbjct: 466 VAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQL 525

Query: 296 KALTLKREGKQAEALEALRSAKRLEK 219
            AL+  ++ K  +  E  +  K+ EK
Sbjct: 526 AALSQPQQNKPKKK-EKDKKEKKKEK 550

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>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)|
            (Molecule associated with JAK3 N-terminus) (MAJN)
          Length = 2054

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
 Frame = -3

Query: 425  DLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEE---------QIKAEKLKALTLKRE 273
            +L  Q+ ++Q   +A+ R  +      QT   ++E          Q   +KLK + ++ E
Sbjct: 1557 ELDEQAGTIQMLEQAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLE 1616

Query: 272  GKQAEALEALRSAKRLEKKLASLS 201
             +  +  + LR  + LE KLA+LS
Sbjct: 1617 EEYEDKQKVLREKRELEGKLATLS 1640

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>HGPB_HAEIN (O87296) Hemoglobin and hemoglobin-haptoglobin-binding protein B|
           precursor
          Length = 999

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -3

Query: 416 TQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEAL-EALR 240
           T  P+ QP  +   +PT   T++   + S   EQ++   +   T   + K    + E ++
Sbjct: 31  TNQPTNQPTNQPTNQPTNQPTNQPTNQNSNASEQLEQINVSGSTENTDTKAPPKIAETVK 90

Query: 239 SAKRLEKKLA 210
           +AK LE++ A
Sbjct: 91  TAKTLEREQA 100

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>TRDN_HUMAN (Q13061) Triadin|
          Length = 728

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = -3

Query: 413 QSPSLQPPVKAE--ARPTVA--ATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEA 246
           QSP++ PP+  E  +RPT A  A  + + E+ + E+++ +E     T K+E +  +    
Sbjct: 285 QSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSE-----TKKKEKEDIKKKSE 339

Query: 245 LRSAKRLEKK 216
             +A  +EKK
Sbjct: 340 KETAIDVEKK 349

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>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein|
           (Chromosome-associated protein E) (hCAP-E) (XCAP-E
           homolog)
          Length = 1197

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -3

Query: 431 AADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEA- 255
           +A LS+     +  +  +        SKAQTE  Q + ++K  + +    + E K+ ++ 
Sbjct: 384 SAGLSSNEDGAEATLAGQMMACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSG 443

Query: 254 ----LEALRSAKRLEKKL 213
                EAL + KRL++KL
Sbjct: 444 YRKDQEALEAVKRLKEKL 461

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>ICAL_HUMAN (P20810) Calpastatin (Calpain inhibitor) (Sperm BS-17 component)|
          Length = 708

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -3

Query: 434 SAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEK-LKALTLKREGKQAE 258
           +AA   T+       +KA++  TV + +  Q ++ ++E+   +++ L+AL+     +QAE
Sbjct: 245 TAAGKKTEKEESTEVLKAQSAGTVRSAAPPQEKKRKVEKDTMSDQALEALSASLGTRQAE 304

Query: 257 ALEALRSAKRLEKKLA 210
               LRS K +++  A
Sbjct: 305 PELDLRSIKEVDEAKA 320

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>ATF4_MOUSE (Q06507) Cyclic AMP-dependent transcription factor ATF-4|
           (C/EBP-related ATF) (C/ATF) (TAXREB67 homolog)
          Length = 349

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = -3

Query: 395 PPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKK 216
           P  K    P V+ T+K +TE+   + +   +   A T  R+ K+AE        K LEKK
Sbjct: 255 PRPKPYDPPGVSLTAKVKTEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKK 314

Query: 215 LASL 204
             +L
Sbjct: 315 NEAL 318

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>TXLNB_CHICK (Q9I969) Beta-taxilin (Muscle-derived protein 77)|
          Length = 676

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 440 GWSAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQA 261
           G S A+    S  L P  +  A+P +A    ++    QLE+ IK     A  +++EG  A
Sbjct: 23  GQSKAEPVPVSQPLSPTNQTSAQPEMATCDISEELNRQLEDIIKTYGSAASLVEKEGTTA 82

Query: 260 E 258
           E
Sbjct: 83  E 83

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>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor|
            (Protein starry night) (Protein flamingo)
          Length = 3574

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 22/79 (27%), Positives = 32/79 (40%)
 Frame = -2

Query: 405  EPATTGESRGKANRGGYKQGSD*EKSARGTDKG*ETEGPDLXXXXXXXXXXXXXSLSKAP 226
            E +TTG SRG   +   +Q  D       +D G ET+G  L               +++ 
Sbjct: 3159 ESSTTGRSRGGEEKPSRRQRKD-------SDSGSETDGRSLELASSHSSDDDESRTARSS 3211

Query: 225  GEEVGLTQLSTPSPSLPHI 169
            G        STP+  LP+I
Sbjct: 3212 GTHRSTAVSSTPA-YLPNI 3229

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>MOEH_DROME (P46150) Moesin/ezrin/radixin homolog 1 (Ezrin-moesin-radixin 1)|
           (Protein D17) (Protein moesin) (dMoesin)
          Length = 578

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -3

Query: 347 AQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKRLEKKLASL 204
           A  ER++ ++Q   ++LK +    E  Q + LEA    +RLE++L  L
Sbjct: 329 AARERAEKKQQEYEDRLKQMQEDMERSQRDLLEAQDMIRRLEEQLKQL 376

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>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)|
          Length = 1657

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 10/57 (17%)
 Frame = -3

Query: 344 QTERSQLEEQIKAEKLKALTLKREGKQA----------EALEALRSAKRLEKKLASL 204
           Q E  +L E+ K EKL+   LK++GK+A          +A++  R+A+ L  K+AS+
Sbjct: 795 QKEIQRLTEEKKMEKLQKKKLKQQGKKAATPTLEPDEEDAMD--RAAQELAMKMASM 849

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>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 359  ATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEALEALRSAKR 228
            A   AQ ERS  EE +   +L+    +R  +QAEA  A   A+R
Sbjct: 1723 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAER 1766

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>TRDN_CANFA (P82179) Triadin|
          Length = 700

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = -3

Query: 413 QSPSLQPPVKA--EARPTVAATSKAQTERSQLEEQIKAE-KLKALTLKREGKQAEALEAL 243
           QSP+L PP+     +RPT A+ +    E  + EE+ KAE K+ + T K+E +  +     
Sbjct: 278 QSPALPPPLPTVQASRPTPASPT---LEGKEEEEKKKAEKKVTSETKKKEKEDVKKKSDK 334

Query: 242 RSAKRLEKK 216
            +A  +EKK
Sbjct: 335 DTAIDVEKK 343

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>HGBB_HAEIN (Q9KIV1) Hemoglobin and hemoglobin-haptoglobin-binding protein B|
           precursor (Hemoglobin-binding protein B)
          Length = 1067

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = -3

Query: 434 SAADLSTQSPSLQPPVKAEARPTVAATSKAQTERSQLEEQIKAEKLKALTLKREGKQAEA 255
           +A+      P+ QP  +   +PT   T++   + S + EQ++   +   +     K+ + 
Sbjct: 18  NASTAYAAQPTNQPTNQPTNQPTNQPTNQPTNQNSNVSEQLEQINVSGSSENINIKEKKV 77

Query: 254 LEALRSAKRLEKKLAS 207
            E   SAK+L K+ AS
Sbjct: 78  GETQISAKKLAKQQAS 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,429,869
Number of Sequences: 219361
Number of extensions: 926085
Number of successful extensions: 3496
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result