>IN37_SPIOL (P23525) 37 kDa inner envelope membrane protein, chloroplast|
           precursor (E37)
          Length = 344

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 493 VEDVSKPHVNPVFVFFRFLIGTICATYFFLVPIYMWIKDKIVPQGRPI 350
           VEDV KP V+P+   +RFL+G + +TY+ LVPIYMWIKDKI P+G P+
Sbjct: 298 VEDVQKP-VHPLVFLYRFLLGALASTYYVLVPIYMWIKDKIFPKGMPL 344

>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein|
           61) (IE61)
          Length = 467

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 300 RSKPCKHPFCSMLCCVCIYMWTRATVRRPIC 208
           ++ PC H FC     VCI  WT  +V+ P+C
Sbjct: 31  KTMPCLHDFCF----VCIRAWTSTSVQCPLC 57

>MURE_SYNEL (Q8DJI4) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 497

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -2

Query: 311 ESISDLSHANTPFVPCCVVYVYICGRARLSEDRSAIGSVHQRIQRQV 171
           +S+ +L  A  PF+P  ++ V+ CG  R    R  +G++  R+  QV
Sbjct: 358 DSLENLLRAARPFIPGKLICVFGCGGDRDRSKRPQMGAIAARLADQV 404

>PHZF_PSECL (Q51520) Phenazine biosynthesis protein phzF|
          Length = 278

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 22/84 (26%), Positives = 31/84 (36%)
 Frame = +2

Query: 152 SFPCPGTPASVSVDERSQ*QIGLLTVARVHIYIHTQHNMEQKGCLHGLDRILTPILSPPV 331
           S P  G P +V  D        +  +AR      T   ++ + C   L RI TP+   P 
Sbjct: 12  SAPLEGNPVTVFFDADDLSATQMQRIAREMNLSETTFVLKPRNCGDALIRIFTPVNELPF 71

Query: 332 REHH*LDGPALGHNLVFDPHVNRH 403
             H     P LG  +    H + H
Sbjct: 72  AGH-----PLLGTAIALGAHTDNH 90

>ACO11_TRINI (O44390) Acyl-CoA delta-11 desaturase (EC 1.14.19.-)|
           (Delta(11)-desaturase)
          Length = 349

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -3

Query: 487 DVSKPHVNPVFVFFRF----LIGTICATYFFLVPIYMW 386
           D+S  + NPV  F +     LIGT+C     L+P+Y W
Sbjct: 167 DMSDVYNNPVLKFQKKYAVPLIGTVCFALPTLIPVYCW 204

>CYB_LIAAL (O48090) Cytochrome b|
          Length = 371

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 481 SKPHVNPVFVFFRFLIGTICATYFFLVPIYMWIKDKIV 368
           +KP V P F+    +  T+  T+F L+PI  W ++K++
Sbjct: 332 TKP-VEPPFIVISQVTSTLYFTFFLLIPILGWTENKMM 368

>CYB_LIACH (O48092) Cytochrome b|
          Length = 371

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -3

Query: 481 SKPHVNPVFVFFRFLIGTICATYFFLVPIYMWIKDKIV 368
           +KP V P F+    +  T+  T+F  +PI  W+++K++
Sbjct: 332 TKP-VEPPFIIISQVTSTLYFTFFLSIPILGWVENKMM 368

>SOX6_HUMAN (P35712) Transcription factor SOX-6|
          Length = 828

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 105 DNSKRDI*AGSKSDQSVSHVLEHLPLYPLMN 197
           D   +D+ +  K + S  HV  HLPL+P+M+
Sbjct: 18  DAMTQDLTSREKEEGSDQHVASHLPLHPIMH 48

>NU1M_DROYA (P07710) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 324

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 460 VFVFFRFLIGTICATYFFLVPIYMW 386
           + + F FLIG+    YFF   IYMW
Sbjct: 153 IMLSFIFLIGSYNMIYFFYYQIYMW 177

>NU1M_DROME (P18929) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 312

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 460 VFVFFRFLIGTICATYFFLVPIYMW 386
           + + F FLIG+    YFF   +YMW
Sbjct: 153 ILLSFIFLIGSYNMIYFFFYQVYMW 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,622,287
Number of Sequences: 219361
Number of extensions: 1679102
Number of successful extensions: 3753
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3750
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)