Clone Name | rbaak4n23 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chai... | 28 | 7.4 | 2 | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chai... | 28 | 7.4 |
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>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 28.1 bits (61), Expect = 7.4 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 Query: 79 AFRPPGCXXSGKA 41 AFRPPGC SGKA Sbjct: 162 AFRPPGCEESGKA 174
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 28.1 bits (61), Expect = 7.4 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 Query: 79 AFRPPGCXXSGKA 41 AFRPPGC SGKA Sbjct: 163 AFRPPGCEESGKA 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,455,733 Number of Sequences: 219361 Number of extensions: 61818 Number of successful extensions: 148 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 148 length of database: 80,573,946 effective HSP length: 1 effective length of database: 80,354,585 effective search space used: 1928510040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)