ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4n16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 47 2e-05
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 39 0.003
3RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RL... 35 0.065
4EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 32 0.55
5RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 32 0.55
6RPIA_NITEU (Q82TX6) Ribose-5-phosphate isomerase A (EC 5.3.1.6) ... 30 1.6
7IFRD2_HUMAN (Q12894) Interferon-related developmental regulator ... 30 2.1
8PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 28 4.6
9NOTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 pr... 28 4.6
10PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7... 28 6.1
11NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 prec... 28 7.9
12NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 pr... 28 7.9

>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
 Frame = -1

Query: 196 LEMMDPCM-------KKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLG 38
           LE++DP +          F   +  +C+QIGLLCVQE    RP MS+V  M GS+   + 
Sbjct: 755 LEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIP 814

Query: 37  APSKP 23
            P  P
Sbjct: 815 QPKPP 819



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 16/59 (27%), Positives = 33/59 (55%)
 Frame = -1

Query: 229 WXGSIGRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSD 53
           W   + + + +  ++D  ++  + + +  + +Q+ LLC Q +P++RP MS V  ML  D
Sbjct: 508 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 566



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>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC|
           2.7.11.1)
          Length = 423

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = -1

Query: 205 RTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSK 26
           R   +M+DP ++  +      + + I  +CVQE P  RP++S V + L     S   P+ 
Sbjct: 330 RNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNS 389

Query: 25  PTST 14
           P+S+
Sbjct: 390 PSSS 393



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 196  LEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMM 83
            ++++DP +    L+    R +QI +LC+ E P  RP M
Sbjct: 1145 VDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNM 1182



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 190  MMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSKPTS 17
            ++DP +   F E +  + + IGLLC    P++RP M  V +ML   + ++   S  TS
Sbjct: 923  VIDPKLDLKFKE-EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTS 979



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>RPIA_NITEU (Q82TX6) Ribose-5-phosphate isomerase A (EC 5.3.1.6)|
           (Phosphoriboisomerase A) (PRI)
          Length = 219

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = +3

Query: 69  MPTADIIGLSTGFSWTHNSPIWTHLLASXSKKXFFIHGSIISNTVRXRPMLPXHGQEILR 248
           +PT +IIG+ TG +    + ++   LA    +   I G++ S+ V     L  HG E+L 
Sbjct: 18  VPTGEIIGIGTGST----ANLFIDELAKIKHR---IEGAVASSEVTAN-RLKQHGIEVLD 69

Query: 249 LQSVTVLP 272
           L SV  LP
Sbjct: 70  LNSVGELP 77



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>IFRD2_HUMAN (Q12894) Interferon-related developmental regulator 2 (SKMC15|
           protein)
          Length = 442

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 211 RXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENP 101
           R  T+ + ++ C+KK   E  A     +GLLCVQ  P
Sbjct: 115 RRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGP 151



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -1

Query: 229  WXGSIGRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRP 89
            W   +       E+ DP +     + +  R ++I  LC+ ENP  RP
Sbjct: 950  WVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRP 996



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>NOTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            (hN1) (Translocation-associated notch protein TAN-1)
            [Contains: Notch 1 extracellular truncation; Notch 1
            intracellular domain]
          Length = 2556

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 214  GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110
            GR R  L+ MD      +LE D R+CVQ    C Q
Sbjct: 1661 GRRRRELDPMDVRGSIVYLEIDNRQCVQASSQCFQ 1695



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>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)|
           (AvrPphB susceptible protein 1)
          Length = 456

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -1

Query: 205 RTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSK 26
           R  +++ DP +K  F      + + +  +C+QE    RP+++ V   L         PSK
Sbjct: 313 RKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDPSK 372

Query: 25  PTS 17
             S
Sbjct: 373 DDS 375



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>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            [Contains: Notch 1 extracellular truncation; Notch 1
            intracellular domain]
          Length = 2531

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 214  GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110
            GR R  L+ MD      +LE D R+CVQ    C Q
Sbjct: 1650 GRQRRELDPMDIHGSIVYLEIDNRQCVQSSSQCFQ 1684



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>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular
            truncation; Notch 1 intracellular domain]
          Length = 2531

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 214  GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110
            GR R  L+ MD      +LE D R+CVQ    C Q
Sbjct: 1650 GRQRRELDPMDIRGSIVYLEIDNRQCVQSSSQCFQ 1684


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,423,828
Number of Sequences: 219361
Number of extensions: 660230
Number of successful extensions: 1709
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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