Clone Name | rbaak4n16 |
---|---|
Clone Library Name | barley_pub |
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 46.6 bits (109), Expect = 2e-05 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%) Frame = -1 Query: 196 LEMMDPCM-------KKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLG 38 LE++DP + F + +C+QIGLLCVQE RP MS+V M GS+ + Sbjct: 755 LEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIP 814 Query: 37 APSKP 23 P P Sbjct: 815 QPKPP 819
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/59 (27%), Positives = 33/59 (55%) Frame = -1 Query: 229 WXGSIGRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSD 53 W + + + + ++D ++ + + + + +Q+ LLC Q +P++RP MS V ML D Sbjct: 508 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 566
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 34.7 bits (78), Expect = 0.065 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = -1 Query: 205 RTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSK 26 R +M+DP ++ + + + I +CVQE P RP++S V + L S P+ Sbjct: 330 RNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNS 389 Query: 25 PTST 14 P+S+ Sbjct: 390 PSSS 393
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 31.6 bits (70), Expect = 0.55 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -1 Query: 196 LEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMM 83 ++++DP + L+ R +QI +LC+ E P RP M Sbjct: 1145 VDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNM 1182
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 31.6 bits (70), Expect = 0.55 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -1 Query: 190 MMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSKPTS 17 ++DP + F E + + + IGLLC P++RP M V +ML + ++ S TS Sbjct: 923 VIDPKLDLKFKE-EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTS 979
>RPIA_NITEU (Q82TX6) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 219 Score = 30.0 bits (66), Expect = 1.6 Identities = 23/68 (33%), Positives = 35/68 (51%) Frame = +3 Query: 69 MPTADIIGLSTGFSWTHNSPIWTHLLASXSKKXFFIHGSIISNTVRXRPMLPXHGQEILR 248 +PT +IIG+ TG + + ++ LA + I G++ S+ V L HG E+L Sbjct: 18 VPTGEIIGIGTGST----ANLFIDELAKIKHR---IEGAVASSEVTAN-RLKQHGIEVLD 69 Query: 249 LQSVTVLP 272 L SV LP Sbjct: 70 LNSVGELP 77
>IFRD2_HUMAN (Q12894) Interferon-related developmental regulator 2 (SKMC15| protein) Length = 442 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 211 RXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENP 101 R T+ + ++ C+KK E A +GLLCVQ P Sbjct: 115 RRLTLADALEKCLKKGKGEEQALAAAVLGLLCVQLGP 151
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/47 (27%), Positives = 21/47 (44%) Frame = -1 Query: 229 WXGSIGRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRP 89 W + E+ DP + + + R ++I LC+ ENP RP Sbjct: 950 WVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRP 996
>NOTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (hN1) (Translocation-associated notch protein TAN-1) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2556 Score = 28.5 bits (62), Expect = 4.6 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 214 GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110 GR R L+ MD +LE D R+CVQ C Q Sbjct: 1661 GRRRRELDPMDVRGSIVYLEIDNRQCVQASSQCFQ 1695
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 28.1 bits (61), Expect = 6.1 Identities = 16/63 (25%), Positives = 28/63 (44%) Frame = -1 Query: 205 RTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQENPVDRPMMSAVGMMLGSDTVSLGAPSK 26 R +++ DP +K F + + + +C+QE RP+++ V L PSK Sbjct: 313 RKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDPSK 372 Query: 25 PTS 17 S Sbjct: 373 DDS 375
>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 27.7 bits (60), Expect = 7.9 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 214 GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110 GR R L+ MD +LE D R+CVQ C Q Sbjct: 1650 GRQRRELDPMDIHGSIVYLEIDNRQCVQSSSQCFQ 1684
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 27.7 bits (60), Expect = 7.9 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 214 GRXRTVLEMMDPCMKKXFLEXDARRCVQIGLLCVQ 110 GR R L+ MD +LE D R+CVQ C Q Sbjct: 1650 GRQRRELDPMDIRGSIVYLEIDNRQCVQSSSQCFQ 1684 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,423,828 Number of Sequences: 219361 Number of extensions: 660230 Number of successful extensions: 1709 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1708 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)