Clone Name | rbaak4o17 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RPIA_THEVO (Q97AU2) Ribose-5-phosphate isomerase A (EC 5.3.1.6) ... | 28 | 5.5 | 2 | RPIA_ARATH (Q9ZU38) Probable ribose-5-phosphate isomerase (EC 5.... | 28 | 9.4 |
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>RPIA_THEVO (Q97AU2) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 241 Score = 28.5 bits (62), Expect = 5.5 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -3 Query: 65 LFLTDNGNYIVEMFF 21 LF+TDNGNYI +M F Sbjct: 168 LFITDNGNYIADMKF 182
>RPIA_ARATH (Q9ZU38) Probable ribose-5-phosphate isomerase (EC 5.3.1.6)| (Phosphoriboisomerase) Length = 265 Score = 27.7 bits (60), Expect = 9.4 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = -3 Query: 62 FLTDNGNYIVEMFFDD 15 F+TDNGNYIV+M ++ Sbjct: 205 FVTDNGNYIVDMHVEE 220 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,715,908 Number of Sequences: 219361 Number of extensions: 68835 Number of successful extensions: 380 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 379 length of database: 80,573,946 effective HSP length: 12 effective length of database: 77,941,614 effective search space used: 1870598736 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)