ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4p24 | 516 | AV910583 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4p23 | 406 | AV910582 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 339 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 142 | -- | --- | - | -- | --- | - |
| baak4p22 | 169 | AV910581 | not_full | emb|X66428.1|HVPSANMR H.vulgare mRNA PsaN for photosystem I subunit N Length = 665 | 51 | not_full | PSAN_HORVU (P31093) Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) Length = 145 | 5 | -- | --- | - | -- | --- | - |
| baak4p21 | 429 | AV910580 | not_full | ref|XM_637431.1| Dictyostelium discoideum hypothetical protein (DDB0218011), partial mRNA Length = 1308 | 386 | not_full | TGB2_WCMVO (P15404) TGB2 protein (Triple gene block 2 protein) (TGBp2) (13 kDa protein) (ORF 3 protein) Length = 117 | 12 | -- | --- | - | -- | --- | - |
| baak4p20 | 510 | AV910579 | not_full | ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 | 184 | not_full | MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd Length = 72 | 6 | -- | --- | - | -- | --- | - |
| baak4p19 | 561 | AV910578 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 417 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 163 | -- | --- | - | -- | --- | - |
| baak4p18 | 428 | AV910577 | not_full | emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chromosome 4, complete sequence Length = 212373 | 473 | not_full | VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf) Length = 1396 | 19 | -- | --- | - | -- | --- | - |
| baak4p17 | 665 | AV910576 | not_full | ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 | 254 | not_full | TIP12_ORYSA (Q94CS9) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein 1.2) (OsTIP1.2) Length = 252 | 185 | -- | --- | - | -- | --- | - |
| baak4p15 | 548 | AV910575 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 422 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 166 | -- | --- | - | -- | --- | - |
| baak4p14 | 530 | AV910574 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4p13 | 469 | AV832524 | not_full | ref|XM_469219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3742 | 75 | not_full | Y113_RICPR (Q9ZE35) UPF0335 protein RP113 Length = 78 | 13 | -- | --- | - | -- | --- | - |
| baak4p12 | 505 | AV910573 | not_full | gb|AY106864.1| Zea mays PCO077289 mRNA sequence Length = 833 | 24 | not_full | R1AB_CVBQ (Q8V6W7) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase ( | 13 | -- | --- | - | -- | --- | - |
| baak4p11 | 272 | AV910572 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 23 | not_full | CARA_ZYMMO (O50235) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) Length = 374 | 1 | -- | --- | - | -- | --- | - |
| baak4p10 | 429 | AV910571 | full | gb|AF446052.1|AF446051S2 Hordeum vulgare Rpl16 (rpl16) gene, exon 2 and partial cds; chloroplast genes for chloroplast products Length = 406 | 500 | not_full | RK16_VIGUN (P42353) Chloroplast 50S ribosomal protein L16 (Fragment) Length = 137 | 308 | -- | --- | - | -- | --- | - |
| baak4p09 | 227 | AV910570 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 71 | not_full | PEPT_LISMF (Q71YN8) Peptidase T (EC 3.4.11.4) (Tripeptide aminopeptidase) (Aminotripeptidase) (Tripeptidase) Length = 410 | 4 | -- | --- | - | -- | --- | - |
| baak4p08 | 502 | AV910569 | not_full | emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV90) Length = 660 | 45 | not_full | ELI9_HORVU (P14897) Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP) Length = 172 | 25 | -- | --- | - | -- | --- | - |
| baak4p07 | 557 | AV910568 | not_full | dbj|AK067511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H05, full insert sequence Length = 3871 | 32 | not_full | CWC21_YARLI (Q6C0M9) Pre-mRNA-splicing factor CWC21 Length = 284 | 15 | -- | --- | - | -- | --- | - |
| baak4p06 | 209 | AV910567 | not_full | gb|BC004909.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:4657 IMAGE:3530715), complete cds Length = 1854 | 10 | not_full | Y498_BUCBP (Q89A47) Hypothetical protein bbp_498 Length = 374 | 3 | -- | --- | - | -- | --- | - |
| baak4p05 | 401 | AV910566 | not_full | emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene Length = 687 | 51 | not_full | CR14_HORVU (P26154) Cold-regulated protein BLT14 Length = 88 | 15 | -- | --- | - | -- | --- | - |
| baak4p03 | 537 | AV910565 | not_full | gb|BT009269.1| Triticum aestivum clone wlk8.pk0006.a4:fis, full insert mRNA sequence Length = 788 | 49 | not_full | CLPP_AZOBR (Q9X6W8) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) Length = 210 | 340 | -- | --- | - | -- | --- | - |
| baak4p01 | 515 | AV910564 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | IN37_SPIOL (P23525) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) Length = 344 | 10 | -- | --- | - | -- | --- | - |
| baak4o24 | 362 | AV910563 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4o23 | 595 | AV910562 | not_full | ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 | 47 | not_full | CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) Length = 417 | 47 | -- | --- | - | -- | --- | - |
| baak4o22 | 509 | AV910561 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4o21 | 476 | AV910560 | not_full | emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin Length = 2244 | 116 | not_full | FER_WHEAT (P00228) Ferredoxin, chloroplast precursor Length = 143 | 114 | -- | --- | - | -- | --- | - |
| baak4o20 | 455 | AV910559 | not_full | gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 | 58 | not_full | ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 | 200 | -- | --- | - | -- | --- | - |
| baak4o19 | 554 | AV910558 | not_full | gb|AY596589.1| Saccharum officinarum clone SCCCRZ2C04A09, complete sequence Length = 2194 | 39 | not_full | PSL2_MOUSE (Q9JJF9) Signal peptide peptidase-like 2A (EC 3.4.23.-) (SPP-like 2A protein) (SPPL2a protein) (Intramembrane protease 3) (IMP3) (Presenilin-like protein 2) Length = 523 | 17 | -- | --- | - | -- | --- | - |
| baak4o18 | 484 | AV910557 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4o17 | 457 | AV910556 | not_full | ref|XM_471731.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 | 73 | not_full | RPIA_ARATH (Q9ZU38) Probable ribose-5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase) Length = 265 | 99 | -- | --- | - | -- | --- | - |
| baak4o16 | 431 | AV910555 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 402 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 172 | -- | --- | - | -- | --- | - |
| baak4o15 | 626 | AV910554 | not_full | dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full insert sequence Length = 2017 | 60 | not_full | YP95_YEAST (Q02891) Hypothetical UPF0017 protein YPL095c Length = 456 | 32 | -- | --- | - | -- | --- | - |
| baak4o14 | 411 | AV910553 | not_full | ref|XM_470091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1344 | 26 | not_full | ZBT38_RAT (Q5EXX3) Zinc finger and BTB domain-containing protein 38 (Zinc finger protein expressed in neurons) (Zenon) Length = 1203 | 5 | -- | --- | - | -- | --- | - |
| baak4o13 | 229 | AV910552 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4o12 | 496 | AV910551 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 130 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 132 | -- | --- | - | -- | --- | - |
| baak4o11 | 632 | AV910550 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4o10 | 517 | AV910549 | not_full | gb|BT016814.1| Zea mays clone Contig647 mRNA sequence Length = 1009 | 24 | not_full | CHIT1_DROME (Q9W5U3) Probable chitinase 1 (EC 3.2.1.14) Length = 508 | 23 | -- | --- | - | -- | --- | - |
| baak4o09 | 613 | AV910548 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 129 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 133 | -- | --- | - | -- | --- | - |
| baak4o06 | 482 | AV910547 | not_full | dbj|AK059981.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E08, full insert sequence Length = 1250 | 61 | not_full | CWF16_SCHPO (Q9P7C5) Cell cycle control protein cwf16 Length = 270 | 8 | -- | --- | - | -- | --- | - |
| baak4o05 | 338 | AV910546 | not_full | gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 | 3 | full | HYFJ_ECOLI (P77453) Hydrogenase-4 component J (EC 1.-.-.-) Length = 137 | 6 | -- | --- | - | -- | --- | - |
| baak4o04 | 245 | AV910545 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 88 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 5 | -- | --- | - | -- | --- | - |
| baak4o03 | 688 | AV910544 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 417 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 160 | -- | --- | - | -- | --- | - |
| baak4o02 | 487 | AV910543 | not_full | dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1783 | 75 | not_full | M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP) (Solute carrier family 25 member 11) Length = 313 | 103 | -- | --- | - | -- | --- | - |
| baak4n24 | 475 | AV910542 | not_full | emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase Length = 1533 | 169 | not_full | KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) Length = 404 | 139 | -- | --- | - | -- | --- | - |
| baak4n23 | 493 | AV910541 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 396 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 165 | -- | --- | - | -- | --- | - |
| baak4n22 | 482 | AV910540 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4n21 | 386 | AV910539 | not_full | emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 | 128 | not_full | PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 | 41 | -- | --- | - | -- | --- | - |
| baak4n20 | 452 | AV910538 | not_full | gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 | 486 | not_full | RL3_ORYSA (P35684) 60S ribosomal protein L3 Length = 388 | 192 | -- | --- | - | -- | --- | - |
| baak4n19 | 488 | AV832523 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 41 | not_full | UCP2_PIG (O97562) Mitochondrial uncoupling protein 2 (UCP 2) Length = 309 | 55 | -- | --- | - | -- | --- | - |
| baak4n18 | 525 | AV910537 | not_full | dbj|AK104746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E07, full insert sequence Length = 1720 | 38 | not_full | AL3A1_MOUSE (P47739) Aldehyde dehydrogenase, dimeric NADP-preferring (EC 1.2.1.5) (ALDH class 3) (Dioxin-inducible aldehyde dehydrogenase 3) Length = 453 | 258 | -- | --- | - | -- | --- | - |
| baak4n17 | 439 | AV910536 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 34 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 33 | -- | --- | - | -- | --- | - |
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