Clone Name | baak4n17 |
---|---|
Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 868 bits (438), Expect = 0.0 Identities = 438/438 (100%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 982 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 1042 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 1102 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1103 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 1162 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaagttcgaaacatgggagcagtaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 agctcgtcggcggccactacgacttcgtctccggcaagttcgaaacatgggagcagtaaa 1222 Query: 302 tcttccccaccggttaactccgacatatacaaacgtacatatatcaagatatcgtccgat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 tcttccccaccggttaactccgacatatacaaacgtacatatatcaagatatcgtccgat 1282 Query: 362 cgatgtgaatgcaatgccatgggagtgcgtacccgttattgtccagtactggatgccgga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 cgatgtgaatgcaatgccatgggagtgcgtacccgttattgtccagtactggatgccgga 1342 Query: 422 tggcccgatgtgaatttg 439 |||||||||||||||||| Sbjct: 1343 tggcccgatgtgaatttg 1360
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 280 bits (141), Expect = 4e-72 Identities = 243/277 (87%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||| Sbjct: 521 gccgctgcggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttcc 580 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| Sbjct: 581 acttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagc 640 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||| |||||||||||||||| ||| || || |||||||||||||||| ||| | Sbjct: 641 acgcctcgctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaat 700 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 701 ccctggagaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctca 760 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||||||||| Sbjct: 761 agctcgtcggcggccactacgacttcgtctccggcaa 797
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 280 bits (141), Expect = 4e-72 Identities = 243/277 (87%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||| Sbjct: 571 gccgctgcggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttcc 630 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| Sbjct: 631 acttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagc 690 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||| |||||||||||||||| ||| || || |||||||||||||||| ||| | Sbjct: 691 acgcctcgctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaat 750 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 751 ccctggagaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctca 810 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||||||||| Sbjct: 811 agctcgtcggcggccactacgacttcgtctccggcaa 847
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 280 bits (141), Expect = 4e-72 Identities = 243/277 (87%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||| Sbjct: 570 gccgctgcggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttcc 629 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| Sbjct: 630 acttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagc 689 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||| |||||||||||||||| ||| || || |||||||||||||||| ||| | Sbjct: 690 acgcctcgctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaat 749 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 750 ccctggagaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctca 809 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||||||||| Sbjct: 810 agctcgtcggcggccactacgacttcgtctccggcaa 846
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 280 bits (141), Expect = 4e-72 Identities = 243/277 (87%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||| Sbjct: 565 gccgctgcggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttcc 624 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| Sbjct: 625 acttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagc 684 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||| |||||||||||||||| ||| || || |||||||||||||||| ||| | Sbjct: 685 acgcctcgctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaat 744 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 745 ccctggagaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctca 804 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||||||||| Sbjct: 805 agctcgtcggcggccactacgacttcgtctccggcaa 841
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 280 bits (141), Expect = 4e-72 Identities = 243/277 (87%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 |||||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||| Sbjct: 556 gccgctgcggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttcc 615 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagt 121 ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| Sbjct: 616 acttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagc 675 Query: 122 gcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgt 181 |||||| |||||||||||||||| ||| || || |||||||||||||||| ||| | Sbjct: 676 acgcctcgctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaat 735 Query: 182 ccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctca 241 |||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 736 ccctggagaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctca 795 Query: 242 agctcgtcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||||||||| Sbjct: 796 agctcgtcggcggccactacgacttcgtctccggcaa 832
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 180 bits (91), Expect = 3e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| ||| ||| |||||||| ||| |||| || ||| |||| |||||||| Sbjct: 449 gctgcggtggcatccgggcgctgctctccctccaggacggtgcacccgacaacttccact 508 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| ||| ||||||||| |||||| ||||| |||||| |||||| ||| ||| || Sbjct: 509 tcgtcgagaactgggtcaagatcggcttccctgccaaggtcaaggtgaagaaagagcacg 568 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 ||||| |||| ||||||||||||||| || ||||||||||||||||||| |||||||||| Sbjct: 569 cctccgtgcccttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtccc 628 Query: 185 tccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagc 244 | |||||||| ||||||||| |||||| |||| || || |||| || |||||||||| Sbjct: 629 tggagaacctcaagacctaccccttcgtccaggaagggctggccaaggggaccctcaagc 688 Query: 245 tcgtcggcggccactacgacttcgtctccgg 275 | ||||||| ||||||||||||||| ||||| Sbjct: 689 tggtcggcgcccactacgacttcgtgtccgg 719
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 155 bits (78), Expect = 1e-34 Identities = 180/214 (84%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| |||||||| ||||| |||| |||||||| Sbjct: 1064 gctgcggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttccact 1123 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| |||||||||||||||||||| ||| |||||||| |||||| ||| ||| || Sbjct: 1124 tcgtggaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacg 1183 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 | ||| |||| ||||||||||||||| || ||||||||||||||||||| |||||||| | Sbjct: 1184 cgtccgtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgc 1243 Query: 185 tccagaacctcttgacctacccgttcgtcaagga 218 ||||||||||| || |||||| || |||||||| Sbjct: 1244 tccagaacctcaagagctaccccttggtcaagga 1277 Score = 147 bits (74), Expect = 4e-32 Identities = 179/214 (83%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| |||||||| ||||| |||| |||| || Sbjct: 458 gctgcggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcacct 517 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| |||||||||||||||||||| ||| |||||||| |||||| ||| ||| || Sbjct: 518 tcgtggaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacg 577 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 | ||| |||| ||||||||||||||| || ||||||||||||||||||| |||||||| | Sbjct: 578 cgtccgtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgc 637 Query: 185 tccagaacctcttgacctacccgttcgtcaagga 218 ||||||||||| || |||||| ||||||||||| Sbjct: 638 tccagaacctcaagagctaccccttcgtcaagga 671 Score = 119 bits (60), Expect = 8e-24 Identities = 216/268 (80%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| ||| |||| |||||| ||| ||||||||| Sbjct: 1667 gctgcggtggcatcagggcgctcctctcactccaggacggcgcacctgacaccttccact 1726 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| ||||||||||| | ||||| ||| ||||||| |||||| ||| ||| || Sbjct: 1727 tcgtcgaggactgggttaagatcgccttcattgccaagatgaaggtaaagaaagagcacg 1786 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 |||| |||| |||||||||||||| || | || |||||||||||||| |||||||||| Sbjct: 1787 cctcggtgccgttcgatgaccagtggtccattctcgagaaggaggccgtgaacgtgtccc 1846 Query: 185 tccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagc 244 | |||||||| ||||||||| ||||||||||| || | | || || |||||||||| Sbjct: 1847 tggagaacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagc 1906 Query: 245 tcgtcggcggccactacgacttcgtctc 272 | |||||| |||||||||||| ||||| Sbjct: 1907 tgatcggcgcccactacgactttgtctc 1934
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 147 bits (74), Expect = 4e-32 Identities = 179/214 (83%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| |||||||| ||||| |||| |||| || Sbjct: 737 gctgcggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcacct 796 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| |||||||||||||||||||| ||| |||||||| |||||| ||| ||| || Sbjct: 797 tcgtggaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacg 856 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 | ||| |||| ||||||||||||||| || ||||||||||||||||||| |||||||| | Sbjct: 857 cgtccgtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgc 916 Query: 185 tccagaacctcttgacctacccgttcgtcaagga 218 ||||||||||| || |||||| ||||||||||| Sbjct: 917 tccagaacctcaagagctaccccttcgtcaagga 950 Score = 143 bits (72), Expect = 5e-31 Identities = 219/268 (81%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| ||| |||| ||||||| | || ||||||||| Sbjct: 1343 gctgcggtggcatcagggcgctcctctcactccaggacggcgcagcctacaccttccact 1402 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| ||||||||||| | |||||| ||| ||||||| |||||| ||| ||| || Sbjct: 1403 tcgtcgaggactgggttaagatcggcttcattgccaagatgaaggtaaagaaagagcacg 1462 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 |||| |||| ||||||||||||||| || | || |||||||||||||| |||||||||| Sbjct: 1463 cctcggtgccgttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccc 1522 Query: 185 tccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagc 244 | |||||||| ||||||||| ||||||||||| || | | || || |||||||||| Sbjct: 1523 tggagaacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagc 1582 Query: 245 tcgtcggcggccactacgacttcgtctc 272 | |||||| |||||||||||| ||||| Sbjct: 1583 tgatcggcgcccactacgactttgtctc 1610
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 135 bits (68), Expect = 1e-28 Identities = 218/268 (81%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| ||| |||| |||||| ||| ||||||||| Sbjct: 1343 gctgcggtggcatcagggcgctcctctccctccaggacggcgcacctgacaccttccact 1402 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| ||||||||||| | |||||| ||| ||||||| |||||| ||| ||| || Sbjct: 1403 tcgtcgaggactgggttaagatcggcttcattgccaagatgaaggtaaagaaagagcacg 1462 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccc 184 |||| |||| ||||||||||||||| || | || |||||||||||||| |||||||||| Sbjct: 1463 cctcggtgccgttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccc 1522 Query: 185 tccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagc 244 | |||||||| ||||||||| ||||||||||| || | | || || |||||||||| Sbjct: 1523 tggagaacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagc 1582 Query: 245 tcgtcggcggccactacgacttcgtctc 272 | |||||| |||||||||||| ||||| Sbjct: 1583 tgatcggcgcccactacgactttgtctc 1610 Score = 97.6 bits (49), Expect = 3e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 5 gctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccact 64 |||||||||| |||| ||| || ||||| |||||||| ||||| |||| |||| || Sbjct: 737 gctgcggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcacct 796 Query: 65 tcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcg 124 |||| |||||||||||||||||||| ||| |||||||| |||||| ||| ||| || Sbjct: 797 tcgtggaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacg 856 Query: 125 cctccatgcctttcgatgaccagtgcaccgtcctggagaaggagg 169 | ||| |||| ||||||||||||||| || ||||||||||||||| Sbjct: 857 cgtccgtgccgttcgatgaccagtgctccatcctggagaaggagg 901
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 188 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 247 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 25698376 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 25698435 Query: 248 tcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||| Sbjct: 25698436 tcggcggccactacgacttcgtctccggcaa 25698466 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 60 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 119 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 25698058 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 25698117 Query: 120 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 166 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 25698118 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 25698164 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatgg 44 |||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 25697841 gccgctgcggtggaatcaaggccctcctctcactcaaggatgg 25697883
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 188 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 247 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 145182 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 145241 Query: 248 tcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||| Sbjct: 145242 tcggcggccactacgacttcgtctccggcaa 145272 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 60 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 119 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 144864 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 144923 Query: 120 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 166 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 144924 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 144970 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatgg 44 |||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 144647 gccgctgcggtggaatcaaggccctcctctcactcaaggatgg 144689
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 188 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 247 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 840 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 899 Query: 248 tcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||| Sbjct: 900 tcggcggccactacgacttcgtctccggcaa 930 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 60 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 119 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 522 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 581 Query: 120 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 166 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 582 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatgg 44 |||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 305 gccgctgcggtggaatcaaggccctcctctcactcaaggatgg 347
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 136 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 195 ||||| ||||||||| || || |||||||||||||||||||||| ||||| | |||||| Sbjct: 730 ttcgacgaccagtgctccatcttggagaaggaggccgtcaacgtctccctgtacaacctc 789 Query: 196 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 255 |||||||||| | || ||||| |||||| ||||||| |||||||||| ||||||||| Sbjct: 790 ctgacctacccctgggtgaaggaaggtgtgtccaacggctccctcaagctggtcggcggc 849 Query: 256 cactacgacttcgtc 270 ||||||||||||||| Sbjct: 850 cactacgacttcgtc 864 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 ||||||||||||| |||||||| || ||||| | |||| ||||||| |||| ||||| Sbjct: 596 gccgctgcggtggcatcaaggcgctcctctcaatgcaggacggcgcagccgacaacttcc 655 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggt 110 ||||||| |||||||||||||||||||| |||| |||||||||||||| Sbjct: 656 acttcgtcgaggactgggtcaggatcggcttcctcgccaagaagaaggt 704
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 136 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 195 ||||||||||||||| || || ||||||||||||| |||||||| |||||| | |||||| Sbjct: 569 ttcgatgaccagtgctccatcttggagaaggaggcagtcaacgtctccctctacaacctc 628 Query: 196 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 255 |||||||||| | || ||||| || ||| ||||||| |||||||||| ||||||||| Sbjct: 629 ctgacctacccctgggtgaaggaaggcgtgtccaacgggtccctcaagctggtcggcggc 688 Query: 256 cactacgacttcgtc 270 ||||||||||||||| Sbjct: 689 cactacgacttcgtc 703 Score = 89.7 bits (45), Expect = 7e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttcc 61 ||||||||||||| |||||||| || ||||| | |||||||||||| |||| ||||| Sbjct: 435 gccgctgcggtggcatcaaggcgctcctctccatgcaggatggcgcagccgacaacttcc 494 Query: 62 acttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggt 110 ||||||| ||||| |||||||||||||| |||| || ||||||||||| Sbjct: 495 acttcgtcgaggattgggtcaggatcggcttcctcgcgaagaagaaggt 543
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 188 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 247 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 7957 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 8016 Query: 248 tcggcggccactacgacttcgtctccggcaa 278 ||||||||||||||||||||||||||||||| Sbjct: 8017 tcggcggccactacgacttcgtctccggcaa 8047 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 60 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 119 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 7639 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 7698 Query: 120 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 166 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 7699 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 7745 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gccgctgcggtggaatcaaggctctgctctcgctcaaggatgg 44 |||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 7422 gccgctgcggtggaatcaaggccctcctctcactcaaggatgg 7464
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 136 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 195 ||||||||||||||| || | || |||||||||||||| ||||||||||| |||||||| Sbjct: 35 ttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggagaacctc 94 Query: 196 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 255 ||||||||| ||||||||||| || | | || || ||||||||||| |||||| | Sbjct: 95 aagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcc 154 Query: 256 cactacgacttcgtctc 272 ||||||||||| ||||| Sbjct: 155 cactacgactttgtctc 171
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 acatatacaaacgtacatata 344 ||||||||||||||||||||| Sbjct: 80872 acatatacaaacgtacatata 80852
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 tcctggagaaggaggccgtcaacgt 179 |||||| |||||||||||||||||| Sbjct: 2833114 tcctggcgaaggaggccgtcaacgt 2833138
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 208 cctcaagctcgtcggcggcc 189
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 acatatacaaacgtacatatatca 347 ||||||||||| |||||||||||| Sbjct: 127196 acatatacaaatgtacatatatca 127219
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 110239 cctcaagctcgtcggcggcc 110220
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 14930461 cctcaagctcgtcggcggcc 14930442
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 28350096 cctcaagctcgtcggcggcc 28350077
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 30832097 cctcaagctcgtcggcggcc 30832078
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 atatacaaacgtacatatat 345 |||||||||||||||||||| Sbjct: 169048 atatacaaacgtacatatat 169067
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 62674 cctcaagctcgtcggcggcc 62655
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 148125 cctcaagctcgtcggcggcc 148106
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 15674 cctcaagctcgtcggcggcc 15655
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 59937 cctcaagctcgtcggcggcc 59918
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctcaagctcgtcggcggcc 256 |||||||||||||||||||| Sbjct: 14938702 cctcaagctcgtcggcggcc 14938683
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ggccaagaagaaggtgcaga 115 |||||||||||||||||||| Sbjct: 246 ggccaagaagaaggtgcaga 265 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,614,498 Number of Sequences: 3902068 Number of extensions: 2614498 Number of successful extensions: 44898 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44683 Number of HSP's gapped (non-prelim): 211 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)