Clone Name | baak4p06 |
---|---|
Clone Library Name | barley_pub |
>gb|BC004909.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:4657 IMAGE:3530715), complete cds Length = 1854 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 ggcagttccctgtagaaacttt 88 |||||||||||||||||||||| Sbjct: 1805 ggcagttccctgtagaaacttt 1784
>gb|AF130089.1|AF130089 Homo sapiens clone FLB9440 PRO2550 mRNA, complete cds Length = 2144 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 ggcagttccctgtagaaacttt 88 |||||||||||||||||||||| Sbjct: 1429 ggcagttccctgtagaaacttt 1450
>emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chromosome 2, complete sequence Length = 207035 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gtgactttgtttgtctgtttggaga 117 |||||||||||||| |||||||||| Sbjct: 201646 gtgactttgtttgtttgtttggaga 201622
>dbj|AP003043.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-617B3, complete sequence Length = 180648 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 tttgtttgtctgtttggagag 118 ||||||||||||||||||||| Sbjct: 145204 tttgtttgtctgtttggagag 145184
>gb|AC158308.4| Mus musculus chromosome 3, clone RP23-182M12, complete sequence Length = 176856 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttgtttgtctgtttggagag 118 |||||||||||||||||||| Sbjct: 121897 ttgtttgtctgtttggagag 121878
>ref|XM_924200.2| PREDICTED: Mus musculus alpha-kinase 1, transcript variant 6 (Alpk1), mRNA Length = 6505 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttgtttgtctgtttggagag 118 |||||||||||||||||||| Sbjct: 6303 ttgtttgtctgtttggagag 6322
>gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, complete sequence Length = 131703 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttgtttgtctgtttggagag 118 |||||||||||||||||||| Sbjct: 79212 ttgtttgtctgtttggagag 79231
>dbj|AK173191.1| Mus musculus mRNA for mKIAA1527 protein Length = 6402 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttgtttgtctgtttggagag 118 |||||||||||||||||||| Sbjct: 6289 ttgtttgtctgtttggagag 6308
>gb|AY746497.1| Enterobacteria phage JS98 contig9 genomic sequence Length = 48675 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gatttaacttcagtctgcca 186 |||||||||||||||||||| Sbjct: 34702 gatttaacttcagtctgcca 34683
>gb|M63149.1|TOVM1P Ustilago maydis virus P1 (M1) gene, complete cds Length = 1504 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgtagaaacttttagcgtga 96 |||||||||||||||||||| Sbjct: 168 tgtagaaacttttagcgtga 187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,543,435 Number of Sequences: 3902068 Number of extensions: 1543435 Number of successful extensions: 112603 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112589 Number of HSP's gapped (non-prelim): 14 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)