ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4p03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009269.1| Triticum aestivum clone wlk8.pk0006.a4:fis, full ... 789 0.0
2ref|XM_466917.1| Oryza sativa (japonica cultivar-group), mRNA 182 8e-43
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 182 8e-43
4dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic D... 182 8e-43
5dbj|AK065162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 8e-43
6dbj|AK062167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 8e-43
7gb|AY107665.1| Zea mays PCO133717 mRNA sequence 176 5e-41
8ref|XM_473235.1| Oryza sativa (japonica cultivar-group), predic... 149 1e-32
9emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 149 1e-32
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
11dbj|AK121934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
12dbj|AK064073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
13gb|BT017371.1| Zea mays clone EL01N0325A03.c mRNA sequence 113 6e-22
14gb|AY107276.1| Zea mays PCO133719 mRNA sequence 113 6e-22
15gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 46 0.12
16gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 42 1.8
17gb|AY657002.1| Streptococcus pyogenes 2812A conjugative transpos... 42 1.8
18gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, co... 42 1.8
19gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.8
20gb|AY445042.1| Streptococcus pyogenes SpyM6 mefA phage-element, ... 42 1.8
21gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, c... 42 1.8
22gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, co... 42 1.8
23dbj|AK155715.1| Mus musculus B6-derived CD11 +ve dendritic cells... 42 1.8
24ref|NM_146391.1| Mus musculus olfactory receptor 1058 (Olfr1058)... 40 7.3
25gb|AY318254.1| Mus musculus olfactory receptor Olfr1058 (Olfr105... 40 7.3
26gb|AY318259.1| Mus musculus olfactory receptor Olfr1063-ps1 pseu... 40 7.3
27gb|AY356102.1| Canis familiaris isolate cOR8V10 olfactory recept... 40 7.3
28gb|AY355623.1| Canis familiaris isolate cOR8V5 olfactory recepto... 40 7.3
29gb|AY448671.1| Eulemur mongoz clone OLG_44 olfactory receptor-li... 40 7.3
30ref|XM_540654.2| PREDICTED: Canis familiaris olfactory receptor ... 40 7.3
31ref|XM_533183.2| PREDICTED: Canis familiaris cOR8V9 olfactory re... 40 7.3
32ref|NG_002128.1| Mus musculus olfactory receptor 1063, pseudogen... 40 7.3
33gb|AC105231.7| Homo sapiens chromosome 15, clone RP11-24F15, com... 40 7.3
34ref|XM_783257.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.3
35ref|XM_782189.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.3
36gb|AE006026.1| Caulobacter crescentus CB15 section 352 of 359 of... 40 7.3
37gb|AF500761.1| Mus musculus olfactory receptor GA_x5J8B7W4PJY-57... 40 7.3
38gb|AF500755.1| Mus musculus olfactory receptor GA_x5J8B7W1Q6G-25... 40 7.3
39gb|AY073704.1| Mus musculus olfactory receptor MOR190-2 gene, co... 40 7.3
40gb|AY074141.1| Mus musculus olfactory receptor MOR190-3P pseudog... 40 7.3
41gb|AC023968.6| Homo sapiens chromosome 15, clone RP11-621H8, com... 40 7.3
42gb|AC018654.23|AC018654 Homo sapiens 12 BAC RP11-489N6 (Roswell ... 40 7.3
43ref|NG_001627.1| Mus musculus olfactory receptor GA_x5J8B7W1Q6G-... 40 7.3
44ref|NG_001621.1| Mus musculus olfactory receptor GA_x5J8B7W4PJY-... 40 7.3
45emb|AJ431405.1|CFA431405 Canis familiaris partial OR04A01 gene f... 40 7.3
46emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-3... 40 7.3
47gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, comple... 40 7.3
48emb|AL935138.7| Mouse DNA sequence from clone RP23-222H15 on chr... 40 7.3
49emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromo... 40 7.3 
>gb|BT009269.1| Triticum aestivum clone wlk8.pk0006.a4:fis, full insert mRNA
           sequence
          Length = 788

 Score =  789 bits (398), Expect = 0.0
 Identities = 485/511 (94%), Gaps = 6/511 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 320

                                                                       
Query: 73  gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 321 gagcagtgcatggagcgtgaccttttcatggaccccgaggaggcccgcgaatgggggctt 380

                                                                       
Query: 133 atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggcctcagtgccgtt 192
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 atagacgaggtcatcgagaaccgcccggcctccctcatgcctgatggcctcagtgccgtt 440

                                                                       
Query: 193 gacccgtctcaccacggtgggggcggcggccccaacggccgtggcagggacagggatatg 252
           |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 441 gacccgcctcaccacggtgggggcgccggcgccaacggccgtggcagggacagggatatg 500

                                                                       
Query: 253 gaggagccctcggcggtatgaggggtggccaggccacaaaggtgaaacctttttctgagt 312
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggagccctccgcggtatgaggggtggccaggccacaaaggtgaaacctttttctgagt 560

                                                                       
Query: 313 ccggtggctatgttgtttgttgttagatctaagttttgatgattcctaatacaacaggtc 372
           ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 561 ccggtggctatgttgtttgttgttagatctaagttt---tgattcctaatacaacaggtc 617

                                                                       
Query: 373 aacttggtatctcctccctgttgtttcaattgcctgaactgagctattgctggtatttat 432
           |||||||||||  || |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 618 aacttggtatcctcttcctgttgtttcaattgcctgaactgagctattgccgatatttat 677

                                                                       
Query: 433 tgcaactcgt-aaaagggatttcattcctttgatactgatataaattgatagcgtgttga 491
           |||||||||| |||||| ||||| ||||||||||||||  |||||||||||| ||| |||
Sbjct: 678 tgcaactcgtaaaaaggaatttcgttcctttgatactg--ataaattgatagtgtggtga 735

                                          
Query: 492 atgtccgttatatgatcaatttcaggtcaca 522
           || || |||||| ||||||||||| ||||||
Sbjct: 736 atatcagttatacgatcaatttcaagtcaca 766
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>ref|XM_466917.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1162

 Score =  182 bits (92), Expect = 8e-43
 Identities = 149/168 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
           |||||||||||||||||||||||||||   |||||||| |||||| | ||||||||||||
Sbjct: 701 ctgcgcgaccgcctcaacaagatctaccagaagcacaccggccaggagatcgacaagatc 760

                                                                       
Query: 73  gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
           ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 761 gagcagtgcatggagcgcgacctcttcatggaccccgaggaggcgcgcgattgggggctc 820

                                                           
Query: 133 atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggc 180
           || |||||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 821 atcgacgaggtaattgagaaccgccccgcgtccctgatacccgagggc 868



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 401  attgcctgaactgagctattgctggtatttattgcaa 437
            |||||||||| ||||||| ||||| ||||||||||||
Sbjct: 1118 attgcctgaattgagctactgctgatatttattgcaa 1154
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  182 bits (92), Expect = 8e-43
 Identities = 149/168 (88%)
 Strand = Plus / Plus

                                                                            
Query: 13       ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
                |||||||||||||||||||||||||||   |||||||| |||||| | ||||||||||||
Sbjct: 25450535 ctgcgcgaccgcctcaacaagatctaccagaagcacaccggccaggagatcgacaagatc 25450594

                                                                            
Query: 73       gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
                ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 25450595 gagcagtgcatggagcgcgacctcttcatggaccccgaggaggcgcgcgattgggggctc 25450654

                                                                
Query: 133      atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggc 180
                || |||||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 25450655 atcgacgaggtaattgagaaccgccccgcgtccctgatacccgagggc 25450702



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 401      attgcctgaactgagctattgctggtatttattgcaa 437
                |||||||||| ||||||| ||||| ||||||||||||
Sbjct: 25450952 attgcctgaattgagctactgctgatatttattgcaa 25450988
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>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1643_A10
          Length = 130037

 Score =  182 bits (92), Expect = 8e-43
 Identities = 149/168 (88%)
 Strand = Plus / Plus

                                                                          
Query: 13     ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
              |||||||||||||||||||||||||||   |||||||| |||||| | ||||||||||||
Sbjct: 106197 ctgcgcgaccgcctcaacaagatctaccagaagcacaccggccaggagatcgacaagatc 106256

                                                                          
Query: 73     gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
              ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 106257 gagcagtgcatggagcgcgacctcttcatggaccccgaggaggcgcgcgattgggggctc 106316

                                                              
Query: 133    atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggc 180
              || |||||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 106317 atcgacgaggtaattgagaaccgccccgcgtccctgatacccgagggc 106364



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 401    attgcctgaactgagctattgctggtatttattgcaa 437
              |||||||||| ||||||| ||||| ||||||||||||
Sbjct: 106614 attgcctgaattgagctactgctgatatttattgcaa 106650
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>dbj|AK065162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C05, full
           insert sequence
          Length = 1213

 Score =  182 bits (92), Expect = 8e-43
 Identities = 149/168 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
           |||||||||||||||||||||||||||   |||||||| |||||| | ||||||||||||
Sbjct: 736 ctgcgcgaccgcctcaacaagatctaccagaagcacaccggccaggagatcgacaagatc 795

                                                                       
Query: 73  gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
           ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 796 gagcagtgcatggagcgcgacctcttcatggaccccgaggaggcgcgcgattgggggctc 855

                                                           
Query: 133 atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggc 180
           || |||||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 856 atcgacgaggtaattgagaaccgccccgcgtccctgatacccgagggc 903



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 401  attgcctgaactgagctattgctggtatttattgcaa 437
            |||||||||| ||||||| ||||| ||||||||||||
Sbjct: 1153 attgcctgaattgagctactgctgatatttattgcaa 1189
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>dbj|AK062167.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B10, full
           insert sequence
          Length = 1162

 Score =  182 bits (92), Expect = 8e-43
 Identities = 149/168 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  ctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
           |||||||||||||||||||||||||||   |||||||| |||||| | ||||||||||||
Sbjct: 701 ctgcgcgaccgcctcaacaagatctaccagaagcacaccggccaggagatcgacaagatc 760

                                                                       
Query: 73  gagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctt 132
           ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 761 gagcagtgcatggagcgcgacctcttcatggaccccgaggaggcgcgcgattgggggctc 820

                                                           
Query: 133 atagacgaggtcatcgagaaccgcccggcctccctcatgcctgagggc 180
           || |||||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 821 atcgacgaggtaattgagaaccgccccgcgtccctgatacccgagggc 868



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 401  attgcctgaactgagctattgctggtatttattgcaa 437
            |||||||||| ||||||| ||||| ||||||||||||
Sbjct: 1118 attgcctgaattgagctactgctgatatttattgcaa 1154
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>gb|AY107665.1| Zea mays PCO133717 mRNA sequence
          Length = 772

 Score =  176 bits (89), Expect = 5e-41
 Identities = 153/173 (88%), Gaps = 1/173 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
           ||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||  |
Sbjct: 214 agatcctcaag-ctgcgcgaccgcctcaacaagatctaccagaagcacacgcgccagccc 272

                                                                       
Query: 61  atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
           ||||||||||||||||||||||||||| | ||||| |||||||| ||||| || ||||||
Sbjct: 273 atcgacaagatcgagcagtgcatggagagggacctcttcatggatcccgacgaggcgcgc 332

                                                                
Query: 121 gaatgggggcttatagacgaggtcatcgagaaccgcccggcctccctcatgcc 173
           || ||||| || || |||||||||||||||||||| || ||||| ||||||||
Sbjct: 333 gactggggcctcatcgacgaggtcatcgagaaccgacctgcctcgctcatgcc 385



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 312 tccggtggctatgttgtttgttgttagatct 342
           |||||||||| ||||||||||||||||||||
Sbjct: 515 tccggtggctttgttgtttgttgttagatct 545



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 386 ctccctgttgtttcaattgcctgaactgagctattg 421
           |||| ||||| |||||||||||||| ||||||||||
Sbjct: 615 ctccttgttgcttcaattgcctgaattgagctattg 650
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>ref|XM_473235.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/158 (87%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
           |||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||  |
Sbjct: 524 agatcctcaagg-tgcgcgaccgtctcaacaagatctacgccaagcacacgagccaggcc 582

                                                                       
Query: 61  atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
           ||||||   |||||||||||||||||||| ||| | |||||||| || ||||| |||| |
Sbjct: 583 atcgaccgtatcgagcagtgcatggagcgggacatgttcatggatccagaggaggcgcac 642

                                                 
Query: 121 gaatgggggcttatagacgaggtcatcgagaaccgccc 158
           || |||||||| || ||||||||||||||| |||||||
Sbjct: 643 gactgggggctcatcgacgaggtcatcgagcaccgccc 680
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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/158 (87%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
             |||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||  |
Sbjct: 35420 agatcctcaagg-tgcgcgaccgtctcaacaagatctacgccaagcacacgagccaggcc 35478

                                                                         
Query: 61    atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
             ||||||   |||||||||||||||||||| ||| | |||||||| || ||||| |||| |
Sbjct: 35479 atcgaccgtatcgagcagtgcatggagcgggacatgttcatggatccagaggaggcgcac 35538

                                                   
Query: 121   gaatgggggcttatagacgaggtcatcgagaaccgccc 158
             || |||||||| || ||||||||||||||| |||||||
Sbjct: 35539 gactgggggctcatcgacgaggtcatcgagcaccgccc 35576
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/158 (87%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
                |||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||  |
Sbjct: 26258843 agatcctcaagg-tgcgcgaccgtctcaacaagatctacgccaagcacacgagccaggcc 26258901

                                                                            
Query: 61       atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
                ||||||   |||||||||||||||||||| ||| | |||||||| || ||||| |||| |
Sbjct: 26258902 atcgaccgtatcgagcagtgcatggagcgggacatgttcatggatccagaggaggcgcac 26258961

                                                      
Query: 121      gaatgggggcttatagacgaggtcatcgagaaccgccc 158
                || |||||||| || ||||||||||||||| |||||||
Sbjct: 26258962 gactgggggctcatcgacgaggtcatcgagcaccgccc 26258999
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>dbj|AK121934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A05, full
           insert sequence
          Length = 1145

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/158 (87%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
           |||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||  |
Sbjct: 746 agatcctcaagg-tgcgcgaccgtctcaacaagatctacgccaagcacacgagccaggcc 804

                                                                       
Query: 61  atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
           ||||||   |||||||||||||||||||| ||| | |||||||| || ||||| |||| |
Sbjct: 805 atcgaccgtatcgagcagtgcatggagcgggacatgttcatggatccagaggaggcgcac 864

                                                 
Query: 121 gaatgggggcttatagacgaggtcatcgagaaccgccc 158
           || |||||||| || ||||||||||||||| |||||||
Sbjct: 865 gactgggggctcatcgacgaggtcatcgagcaccgccc 902
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>dbj|AK064073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H01, full
           insert sequence
          Length = 1014

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/158 (87%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatcctcaagnctgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaac 60
           |||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||  |
Sbjct: 538 agatcctcaagg-tgcgcgaccgtctcaacaagatctacgccaagcacacgagccaggcc 596

                                                                       
Query: 61  atcgacaagatcgagcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgc 120
           ||||||   |||||||||||||||||||| ||| | |||||||| || ||||| |||| |
Sbjct: 597 atcgaccgtatcgagcagtgcatggagcgggacatgttcatggatccagaggaggcgcac 656

                                                 
Query: 121 gaatgggggcttatagacgaggtcatcgagaaccgccc 158
           || |||||||| || ||||||||||||||| |||||||
Sbjct: 657 gactgggggctcatcgacgaggtcatcgagcaccgccc 694
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>gb|BT017371.1| Zea mays clone EL01N0325A03.c mRNA sequence
          Length = 1115

 Score =  113 bits (57), Expect = 6e-22
 Identities = 123/145 (84%)
 Strand = Plus / Plus

                                                                       
Query: 14  tgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatcg 73
           |||| ||||| |||||||| ||||| ||||||||||||||||||  |||||||   ||||
Sbjct: 579 tgcgggaccggctcaacaaaatctatgccaagcacacgggccaggccatcgaccgcatcg 638

                                                                       
Query: 74  agcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctta 133
           ||||||| |||||| | ||| | ||||||||||| ||||| || |  || ||||||||||
Sbjct: 639 agcagtgtatggagagggacatgttcatggacccggaggaggcacatgattgggggctta 698

                                    
Query: 134 tagacgaggtcatcgagaaccgccc 158
           | ||||||||||||||| |||||||
Sbjct: 699 tcgacgaggtcatcgagcaccgccc 723
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>gb|AY107276.1| Zea mays PCO133719 mRNA sequence
          Length = 1145

 Score =  113 bits (57), Expect = 6e-22
 Identities = 123/145 (84%)
 Strand = Plus / Plus

                                                                       
Query: 14  tgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatcg 73
           |||| ||||| |||||||| ||||| ||||||||||||||||||  |||||||   ||||
Sbjct: 649 tgcgggaccggctcaacaaaatctatgccaagcacacgggccaggccatcgaccgcatcg 708

                                                                       
Query: 74  agcagtgcatggagcgtgaccttttcatggaccccgaggaagcgcgcgaatgggggctta 133
           ||||||| |||||| | ||| | ||||||||||| ||||| || |  || ||||||||||
Sbjct: 709 agcagtgtatggagagggacatgttcatggacccggaggaggcacatgattgggggctta 768

                                    
Query: 134 tagacgaggtcatcgagaaccgccc 158
           | ||||||||||||||| |||||||
Sbjct: 769 tcgacgaggtcatcgagcaccgccc 793
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 14     tgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
              ||||||||||||||||||||||   |||| | ||||| ||||||  |||||| ||||||
Sbjct: 544173 tgcgcgaccgcctcaacaagattctcgcccatcacaccggccagcccatcgagaagatc 544231



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 14     tgcgcgaccgcctcaacaagatctacgccaagcacacgggccagaacatcgacaagatc 72
              ||||||||||||||||||||||   |||| | ||||| ||||||  |||||| ||||||
Sbjct: 238568 tgcgcgaccgcctcaacaagattctcgcccatcacaccggccagcccatcgagaagatc 238626
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>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 347     tttgatgattcctaatacaac 367
               |||||||||||||||||||||
Sbjct: 1130887 tttgatgattcctaatacaac 1130907
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>gb|AY657002.1| Streptococcus pyogenes 2812A conjugative transposon Tn1207.3, complete
             sequence
          Length = 52491

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   tttgatgattcctaatacaac 367
             |||||||||||||||||||||
Sbjct: 41141 tttgatgattcctaatacaac 41121
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>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence
          Length = 172853

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 234  tggcagggacagggatatgga 254
            |||||||||||||||||||||
Sbjct: 1744 tggcagggacagggatatgga 1764
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 25      ctcaacaagatctacgccaagcacacggg 53
               |||||| ||||||||| ||||||||||||
Sbjct: 2083133 ctcaacgagatctacgtcaagcacacggg 2083105
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>gb|AY445042.1| Streptococcus pyogenes SpyM6 mefA phage-element, complete sequence
          Length = 58761

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   tttgatgattcctaatacaac 367
             |||||||||||||||||||||
Sbjct: 47493 tttgatgattcctaatacaac 47473
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>gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, complete sequence
          Length = 168362

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 234   tggcagggacagggatatgga 254
             |||||||||||||||||||||
Sbjct: 24029 tggcagggacagggatatgga 24009
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>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence
          Length = 173042

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 234   tggcagggacagggatatgga 254
             |||||||||||||||||||||
Sbjct: 29061 tggcagggacagggatatgga 29081
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>dbj|AK155715.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730208G19
            product:hypothetical Cysteine-rich region profile
            containing protein, full insert sequence
          Length = 2066

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  tggcagggacagggatatgga 254
            |||||||||||||||||||||
Sbjct: 1884 tggcagggacagggatatgga 1864
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>ref|NM_146391.1| Mus musculus olfactory receptor 1058 (Olfr1058), mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 795 tcattcctttgatactgata 814
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>gb|AY318254.1| Mus musculus olfactory receptor Olfr1058 (Olfr1058) gene, complete
           cds
          Length = 951

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 795 tcattcctttgatactgata 814
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>gb|AY318259.1| Mus musculus olfactory receptor Olfr1063-ps1 pseudogene, complete
           sequence
          Length = 921

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 774 tcattcctttgatactgata 793
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>gb|AY356102.1| Canis familiaris isolate cOR8V10 olfactory receptor family 8
           subfamily V-like gene, partial sequence
          Length = 654

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 543 tcattcctttgatactgata 562
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>gb|AY355623.1| Canis familiaris isolate cOR8V5 olfactory receptor family 8
           subfamily V-like gene, partial sequence
          Length = 273

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 129 tcattcctttgatactgata 148
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>gb|AY448671.1| Eulemur mongoz clone OLG_44 olfactory receptor-like protein gene,
           partial sequence
          Length = 667

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 607 tcattcctttgatactgata 626
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>ref|XM_540654.2| PREDICTED: Canis familiaris olfactory receptor (OR04A01), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 840 tcattcctttgatactgata 859
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>ref|XM_533183.2| PREDICTED: Canis familiaris cOR8V9 olfactory receptor family 8
           subfamily V-like (cOR8V9), mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 804 tcattcctttgatactgata 823
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>ref|NG_002128.1| Mus musculus olfactory receptor 1063, pseudogene 1 (Olfr1063-ps1)
           on chromosome 2
          Length = 939

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 795 tcattcctttgatactgata 814
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>gb|AC105231.7| Homo sapiens chromosome 15, clone RP11-24F15, complete sequence
          Length = 145168

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   attgcctgaactgagctatt 420
             ||||||||||||||||||||
Sbjct: 19271 attgcctgaactgagctatt 19290
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>ref|XM_783257.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10084-PA,
           isoform A (LOC583344), partial mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 accacggtgggggcggcggc 222
           ||||||||||||||||||||
Sbjct: 902 accacggtgggggcggcggc 921
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>ref|XM_782189.1| PREDICTED: Strongylocentrotus purpuratus similar to cutaneous T-cell
            lymphoma tumor antigen se70-2 (LOC582229), mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  accacggtgggggcggcggc 222
            ||||||||||||||||||||
Sbjct: 1763 accacggtgggggcggcggc 1782
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>gb|AE006026.1| Caulobacter crescentus CB15 section 352 of 359 of the complete genome
          Length = 10339

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  tcatcgagaaccgcccggcc 162
            ||||||||||||||||||||
Sbjct: 1967 tcatcgagaaccgcccggcc 1948
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>gb|AF500761.1| Mus musculus olfactory receptor GA_x5J8B7W4PJY-571-1491 pseudogene,
           complete sequence
          Length = 921

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 774 tcattcctttgatactgata 793
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>gb|AF500755.1| Mus musculus olfactory receptor GA_x5J8B7W1Q6G-2523-3443
           pseudogene, complete sequence
          Length = 921

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 774 tcattcctttgatactgata 793
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>gb|AY073704.1| Mus musculus olfactory receptor MOR190-2 gene, complete cds
          Length = 951

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 795 tcattcctttgatactgata 814
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>gb|AY074141.1| Mus musculus olfactory receptor MOR190-3P pseudogene, partial
           sequence
          Length = 939

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 795 tcattcctttgatactgata 814
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>gb|AC023968.6| Homo sapiens chromosome 15, clone RP11-621H8, complete sequence
          Length = 173586

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    attgcctgaactgagctatt 420
              ||||||||||||||||||||
Sbjct: 170148 attgcctgaactgagctatt 170167
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>gb|AC018654.23|AC018654 Homo sapiens 12 BAC RP11-489N6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 74081

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   ggtgaaacctttttctgagt 312
             ||||||||||||||||||||
Sbjct: 40785 ggtgaaacctttttctgagt 40804
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>ref|NG_001627.1| Mus musculus olfactory receptor GA_x5J8B7W1Q6G-2523-3443
           (GA_x5J8B7W1Q6G-2523-3443) pseudogene
          Length = 921

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 774 tcattcctttgatactgata 793
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>ref|NG_001621.1| Mus musculus olfactory receptor GA_x5J8B7W4PJY-571-1491
           (GA_x5J8B7W4PJY-571-1491) pseudogene on chromosome 2
          Length = 921

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 774 tcattcctttgatactgata 793
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>emb|AJ431405.1|CFA431405 Canis familiaris partial OR04A01 gene for olfactory receptor
          Length = 469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tcattcctttgatactgata 472
           ||||||||||||||||||||
Sbjct: 415 tcattcctttgatactgata 434
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>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168991

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   ccacaaaggtgaaacctttt 305
             ||||||||||||||||||||
Sbjct: 24709 ccacaaaggtgaaacctttt 24690
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>gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, complete sequence
          Length = 174388

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    attcctttgatactgatata 474
              ||||||||||||||||||||
Sbjct: 104658 attcctttgatactgatata 104677
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>emb|AL935138.7| Mouse DNA sequence from clone RP23-222H15 on chromosome 2, complete
              sequence
          Length = 139189

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    tcattcctttgatactgata 472
              ||||||||||||||||||||
Sbjct: 127281 tcattcctttgatactgata 127262
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>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete sequence
          Length = 212009

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    tcattcctttgatactgata 472
              ||||||||||||||||||||
Sbjct: 173082 tcattcctttgatactgata 173101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,905,656
Number of Sequences: 3902068
Number of extensions: 3905656
Number of successful extensions: 76915
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76712
Number of HSP's gapped (non-prelim): 200
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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