>VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf)|
          Length = 1396

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +3

Query: 81  TEESNSGNTENAKPRDEA*YSKNMLLEAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGN 260
           T E+N+ N++NA    E            AA++ S +S    +  N    A T E+N+GN
Sbjct: 108 TSETNANNSKNAAKTSET----------NAASSASSASSFATAAENSARAAKTSETNAGN 157

Query: 261 TENA 272
           +  A
Sbjct: 158 SAQA 161

>UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-recognin-1 (EC|
           6.-.-.-) (N-end-recognizing protein)
          Length = 1958

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
 Frame = -3

Query: 264 QYYLSWTPPSRHQDHHSLLI-MLSHYFEKVXXXXXXLITYFLSIMPH-------LSALHS 109
           +Y ++  P S H   H LL+ +LS Y E+            L++  H       LS + +
Sbjct: 697 EYDIALQPVSFHHPLHWLLVYLLSFYVERDNYKLLWTQLDLLAVTDHPLRVCAWLSQMRA 756

Query: 108 QYYLSWTPPSRHQDHHYLLLIMPSHYFEKVLLLLLL 1
           + ++      R Q HHY  L    + F+  +LLL L
Sbjct: 757 KLWIRNGTTLRDQAHHYRNLSFHEYTFDLDVLLLQL 792

>T2R34_MOUSE (Q7TQB0) Putative taste receptor type 2 member 34 (T2R34)|
          Length = 298

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -3

Query: 420 THHLANPAYQMETKTISFFLQPIDAKASALLYSAYNILSVFSIMPHLSALHSQYYLSW 247
           TH  +  A+ M  K+++FFL         + Y++Y +L   S+  H+  +H  ++ +W
Sbjct: 213 THDYSTQAHIMALKSLAFFL---------IFYTSYTLLLTVSV-AHVINVHGSWHWAW 260

>AIP1_YEAST (P46680) Actin-interacting protein 1|
          Length = 615

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 309 LSVFSIMPHLSALHSQYYLSWTPPSRHQDHHSLLIMLSH 193
           ++  ++ P +S  +    + W+  S HQDH +L++ L +
Sbjct: 342 ITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380

>OPTIX_DROME (Q95RW8) Protein Optix (Homeobox protein SIX3) (D-Six3)|
          Length = 487

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
 Frame = +3

Query: 108 ENAKPRDEA*YSKNML---------------LEAAAATTPSQSSDSTLSGGNDG--PGAV 236
           +N + RD A  +KN +                + AA+ TPS SSDS +S G     P ++
Sbjct: 205 KNRRQRDRAAAAKNRIQHSQNSSGMGCRSRRADGAASPTPSDSSDSDISLGTHSPVPSSL 264

Query: 237 TEESNSGNTEN-AKLRDEA 290
             + + G+T N A  R+E+
Sbjct: 265 QLQHSPGSTSNGANDREES 283

>FANCA_HUMAN (O15360) Fanconi anemia group A protein (Protein FACA)|
          Length = 1455

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = -2

Query: 133 ASSLGFAFSVLPELDSSVTAPGPSLPPPDNAKSLL 29
           A  LG + S LPE+D    APG  LP P    SLL
Sbjct: 788 AVHLGESRSALPEVDVGPPAPGAGLPVPALFDSLL 822

>TGB2_WCMVO (P15404) TGB2 protein (Triple gene block 2 protein) (TGBp2) (13 kDa|
           protein) (ORF 3 protein)
          Length = 117

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 396 YQMETKTISFFLQPIDAKASALLYSAYNILSVFSIMPHLSALHSQYYLS 250
           Y+  TKTI +F +P     S  L  ++N      I+  +  LH  +Y S
Sbjct: 51  YKDGTKTIKYFQRPNQHSLSKTLAKSHNTTIFLIILGLIGTLHGLHYFS 99

>YD22_SCHPO (Q10250) Hypothetical protein C56F8.02 in chromosome I|
          Length = 1517

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 410 WPTQLTKWKPKLFHSFYNQLMPKLPPCSTPHTTYFLF 300
           WP  +  WK   F  F+ +   ++PP   P   Y  F
Sbjct: 293 WPKNVEWWKTNEFGGFHLKKKAEMPPLQVPDLAYIEF 329

>FKBP4_GIBZE (Q4INZ9) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 495

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 84  EESNSGNTENAKPRDEA*YSK-NMLLEAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGN 260
           EE+N G ++ AK + +   +    LLE+A   +  +  D+  +G   G    TEES+   
Sbjct: 124 EEANGGPSDPAKAKKQRQAAAIKKLLESAQEESDEEMEDAKPNGKAKGKAKATEESDDDE 183

Query: 261 TENA 272
            E++
Sbjct: 184 DEDS 187

>PUR4_RALSO (Q8XYN6) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1369

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -2

Query: 235 TAPGPSFPPDNVES---LL*EGVVAAAASNNIFFEYYASSLGFAFSV 104
           TAPGP   PD + S   ++ EG +  AA NN   E+   +LG  F V
Sbjct: 390 TAPGPVGKPDRIASPLQIMIEGPIGGAAFNN---EFGRPNLGGYFRV 433

>OSA_DROYA (Q9NGB4) Trithorax group protein osa (Protein eyelid) (Fragment)|
          Length = 324

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 172 AAAASNNIFFEYYASSLGFAFSVLPELDSSVTAPG----PSLPPPDNA 41
           AAAA +N      A++   A SV P   SSV+A      P+ PPP NA
Sbjct: 271 AAAALSNASAAAAAAAAAAAASVGPPTSSSVSAGAAVAQPAAPPPTNA 318

>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)|
          Length = 324

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 172 AAAASNNIFFEYYASSLGFAFSVLPELDSSVTAPG----PSLPPPDNA 41
           AAAA +N      A++   A SV P   SSV+A      P+ PPP NA
Sbjct: 271 AAAALSNASAAAAAAAAAAAASVGPPTSSSVSAGAAVAQPAAPPPTNA 318

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 172  AAAASNNIFFEYYASSLGFAFSVLPELDSSVTAPG----PSLPPPDNA 41
            AAAA +N      A++   A SV P   SSV+A      P+ PPP NA
Sbjct: 2662 AAAALSNASAAAAAAAAAAAASVGPPTSSSVSAGAAVAQPAAPPPTNA 2709

>VP40_EBOZM (Q05128) Matrix protein VP40|
          Length = 326

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 159 EAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGNTENAKLR 281
           E   A  P +S+ +   GGN   G +T ES +G+T +  LR
Sbjct: 12  EYMEAIYPVRSNSTIARGGNSNTGFLTPESVNGDTPSNPLR 52

>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor) (Transcription coactivator p75)
           (LEDGF/p75)
          Length = 530

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 QSSDSTLSGGNDGPGAVTEESNSGNTENAKLRDEA 290
           Q+   TL+GG+D P +   + N  ++E +K + EA
Sbjct: 472 QTGSKTLNGGSDAPDSNQAQHNGDSSEESKDKHEA 506

>BRO1_GIBZE (Q4IBS9) Vacuolar protein-sorting protein BRO1 (BRO domain-containing|
            protein 1)
          Length = 995

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
 Frame = -2

Query: 229  PGPSFPPDNVESLL*EGVVAAAAS--NNIFFEYYASSLGFAFSVLPELDSSVTAPGPSLP 56
            PGP+ PP N  S    G    A+   N   F    S  G+  S  P+       PG   P
Sbjct: 877  PGPTSPPPNQTSFNIGGYRGPASPPPNQSTFGQSQSFGGYGASSTPQTQGGYVPPGFVPP 936

Query: 55   PP 50
            PP
Sbjct: 937  PP 938

>CK5P1_ARATH (Q8H0V1) CDK5RAP1-like protein|
          Length = 640

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 18/92 (19%)
 Frame = +3

Query: 165 AAATTPSQSSDSTLSGGNDGPGAVTEES------------------NSGNTENAKLRDEA 290
           A+ TTP   S+STL       G +  E+                  NSG  E     + A
Sbjct: 108 ASLTTPETESESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESA 167

Query: 291 *Y*KQKVCCMRSRARRKLWHQLVVERMK*FWF 386
                  C +R  A +++W     +R+  FWF
Sbjct: 168 EVIFVNTCAIRENAEQRVW-----QRLNYFWF 194

>ALL4_ASPFU (O60024) Allergen Asp f 4 precursor|
          Length = 322

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
 Frame = +3

Query: 78  VTEESNSGNTENAKPRDEA*YSKNMLLEAAAATTP---SQSSDSTLSGG----------- 215
           + E S    T +A P  +A    N +  AAAA+TP   S  SDS+ S G           
Sbjct: 55  INEWSGEAKTSDA-PVSQATPVSNAVAAAAAASTPEPSSSHSDSSSSSGVSADWTNTPAE 113

Query: 216 ----NDGPGAVTEESNSG 257
                DG G  TE S SG
Sbjct: 114 GEYCTDGFGGRTEPSGSG 131

>NGN1_RAT (P70595) Neurogenin 1 (Neurogenic differentiation factor 3)|
           (NeuroD3) (Neurogenic basic-helix-loop-helix protein)
          Length = 244

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +3

Query: 90  SNSGNTENAKPRDEA*YSK-NMLLEAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGNTE 266
           SNSG+  ++   DE   ++   L   +  + P++ S  TLSG ++ PG   EE       
Sbjct: 17  SNSGSDLSSFLTDEEDCARLQPLASTSGLSVPARRSAPTLSGASNVPGGQDEEQERRRRR 76

Query: 267 -NAKLRDEA 290
             A++R EA
Sbjct: 77  GRARVRSEA 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,982,143
Number of Sequences: 219361
Number of extensions: 1019086
Number of successful extensions: 3832
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3820
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)