Clone Name | baak4o05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC107365.2| Danio rerio, clone -241I7, complete sequence | 42 | 1.1 | 2 | emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in l... | 40 | 4.5 | 3 | emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 i... | 40 | 4.5 |
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>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ttatcgtctatctatagccta 167 ||||||||||||||||||||| Sbjct: 106188 ttatcgtctatctatagccta 106168
>emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in linkage group 2 Contains three novel genes, a novel gene similar to human CASQ1 (calsequestrin 1), six novel genes similar to vertebrate C1Q (gliacolin), a novel gene similar to human HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)), a novel gene for a protein similar to human H326 protein, two novel genes for proteins similar to human apolipoproteins, a novel gene similar to human TEP1 (telomerase-associated protein 1) and a CpG island, complete sequence Length = 143586 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ataatatggacctgctggat 186 |||||||||||||||||||| Sbjct: 122457 ataatatggacctgctggat 122476
>emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 in linkage group 19, complete sequence Length = 169993 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgaagcaactacagtacatt 145 |||||||||||||||||||| Sbjct: 60684 cgaagcaactacagtacatt 60703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,895,883 Number of Sequences: 3902068 Number of extensions: 1895883 Number of successful extensions: 32243 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32238 Number of HSP's gapped (non-prelim): 5 length of query: 338 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 316 effective length of database: 17,147,199,772 effective search space: 5418515127952 effective search space used: 5418515127952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)