ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4o06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
3gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 54 4e-04
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
5emb|AL772295.5| Zebrafish DNA sequence from clone CH211-14A17 in... 44 0.42
6gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complet... 44 0.42
7emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, co... 44 0.42
8gb|AY103764.1| Zea mays PCO141375 mRNA sequence 44 0.42
9gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, comp... 42 1.6
10ref|XM_632697.1| Dictyostelium discoideum hypothetical protein (... 42 1.6
11emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chr... 42 1.6
12emb|AL445256.18| Human DNA sequence from clone RP11-167K24 on ch... 42 1.6
13emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on ch... 42 1.6
14gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome... 42 1.6
15gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, com... 42 1.6
16dbj|AK141454.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 42 1.6
17dbj|AK165025.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 1.6
18dbj|AK032569.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.6
19dbj|AK048673.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 1.6
20gb|AC156948.10| Mus musculus 10 BAC RP24-347D15 (Roswell Park Ca... 42 1.6
21emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 i... 42 1.6
22dbj|AK173299.1| Mus musculus mRNA for mKIAA1913 protein 42 1.6
23gb|BC048001.1| Mus musculus, clone IMAGE:6707334, mRNA 42 1.6
24ref|NM_029881.1| Mus musculus RIKEN cDNA C030003D03 gene (C03000... 42 1.6
25emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 42 1.6
26emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 42 1.6
27gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, com... 42 1.6
28dbj|AB002338.1| Human mRNA for KIAA0340 gene, partial cds 42 1.6
29dbj|AB045726.1| Homo sapiens Nbla00761 mRNA for RIM short form, ... 42 1.6
30ref|XM_642341.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
31ref|XM_636453.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
32ref|XM_630124.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
33gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome... 40 6.5
34gb|AC149266.1| Solanum demissum chromosome 5 clone PGEC872C13 ma... 40 6.5
35gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 40 6.5
36gb|AY813278.1| Schistosoma japonicum SJCHGC05042 protein mRNA, c... 40 6.5
37gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 6.5
38ref|XM_816208.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 6.5
39emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
40emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, ... 40 6.5
41gb|AC113267.14| Papio anubis clone rp41-174i6, complete sequence 40 6.5
42gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, comple... 40 6.5
43gb|AC171142.3| Cavia porcellus clone CH234-487I3, complete sequence 40 6.5
44gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, com... 40 6.5
45gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, com... 40 6.5
46gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, comple... 40 6.5
47gb|AC093046.1| Drosophila melanogaster, chromosome 2R, region 43... 40 6.5
48gb|AC005042.2| Homo sapiens BAC clone RP11-552E1 from 2, complet... 40 6.5
49dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
50gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, r... 40 6.5
51gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete ... 40 6.5
52gb|DQ108883.1| Arabidopsis thaliana clone 92021 mRNA sequence 40 6.5
53emb|AL929219.16| Mouse DNA sequence from clone RP23-53I18 on chr... 40 6.5
54dbj|AK065155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
55emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in... 40 6.5
56gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10... 40 6.5
57gb|AC119967.11| Mus musculus chromosome 10, clone RP24-473K14, c... 40 6.5
58emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 i... 40 6.5
59gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 6.5
60gb|AC004283.1|AC004283 Drosophila melanogaster DNA sequence (P1 ... 40 6.5
61emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, B... 40 6.5 
>dbj|AK059981.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E08, full
            insert sequence
          Length = 1250

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                        
Query: 74   aattgattattcattgattgagcagaggaggcaacttattactctctgacatcaacgacg 133
            ||||||||||||||||||||| |||||||||||| || || ||||   | ||||||| ||
Sbjct: 936  aattgattattcattgattgatcagaggaggcaatttcttcctctgcaatatcaacgccg 995

                                       
Query: 134  tggagatcattatcagttggtagatgt 160
             || ||||  |||||||||||||||||
Sbjct: 996  gggcgatctctatcagttggtagatgt 1022
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                              
Query: 74      aattgattattcattgattgagcagaggagg 104
               ||||||||||||||||||||| |||||||||
Sbjct: 4009764 aattgattattcattgattgatcagaggagg 4009794
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 74    aattgattattcattgattgagcagaggagg 104
             ||||||||||||||||||||| |||||||||
Sbjct: 89604 aattgattattcattgattgatcagaggagg 89574
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                              
Query: 74      aattgattattcattgattgagcagaggagg 104
               ||||||||||||||||||||| |||||||||
Sbjct: 4009875 aattgattattcattgattgatcagaggagg 4009905
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>emb|AL772295.5| Zebrafish DNA sequence from clone CH211-14A17 in linkage group 2
             Contains a novel gene for a protein similar to apoptotic
             chromatin condensation inducer in the nucleus (ACINUS),
             two novel genes, a novel gene for a protein with  a short
             chain dehydrogenase domain, a novel homeodomain gene, two
             novel genes for proteins with a zona pellucida-like
             domain, a novel ubiquitin-like gene, a novel gene similar
             to AP1G2 (adaptor-related protein complex 1, gamma 2
             subunit), a novel gene similar to SLC7A8 (solute carrier
             family 7 (cationic amino acid transporter, y+ system),
             member 8), a novel gene similar to human and mouse SKB1
             homolog (S. pombe), a gene for a novel proteasome, the
             psmb5 gene for proteasome (prosome, macropain) subunit,
             beta type, 5 and two CpG islands, complete sequence
          Length = 194351

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 314   aaaatgaagatgctgaaaatgcaaaa 339
             ||||||||||||||||||||| ||||
Sbjct: 32157 aaaatgaagatgctgaaaatgtaaaa 32182
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>gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complete sequence
          Length = 135506

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 372   tatttggaaccttccaaaagag 393
             ||||||||||||||||||||||
Sbjct: 74988 tatttggaaccttccaaaagag 75009
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>emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, complete sequence
          Length = 205118

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 314   aaaatgaagatgctgaaaatgcaaaa 339
             ||||||||||||||||||||| ||||
Sbjct: 51200 aaaatgaagatgctgaaaatgtaaaa 51175
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>gb|AY103764.1| Zea mays PCO141375 mRNA sequence
          Length = 1044

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 75  attgattattcattgattgagcagaggaggcaacttattactctctgacatcaacgacgt 134
           ||||| || ||| |||||||||||||||||||| || || ||||   ||| || || |||
Sbjct: 845 attgactactcactgattgagcagaggaggcaatttcttcctctgcaacaccagcggcgt 904

                                     
Query: 135 ggagatcattatcagttggtagatgt 160
           || ||||  |||||| ||||||||||
Sbjct: 905 ggcgatctctatcagctggtagatgt 930
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>gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, complete sequence
          Length = 172954

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 309   agatgaaaatgaagatgctga 329
             |||||||||||||||||||||
Sbjct: 49924 agatgaaaatgaagatgctga 49944
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>ref|XM_632697.1| Dictyostelium discoideum hypothetical protein (DDB0186863), partial
            mRNA
          Length = 6018

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 309  agatgaaaatgaagatgctga 329
            |||||||||||||||||||||
Sbjct: 4980 agatgaaaatgaagatgctga 5000
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>emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chromosome 10, complete
              sequence
          Length = 131465

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     aattgattattcattgattga 94
              |||||||||||||||||||||
Sbjct: 101149 aattgattattcattgattga 101169
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>emb|AL445256.18| Human DNA sequence from clone RP11-167K24 on chromosome 6 Contains part
             of the RAB3IP2 gene for RAB3 interacting protein 2,
             complete sequence
          Length = 66683

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 364   ctgaaatatatttggaacctt 384
             |||||||||||||||||||||
Sbjct: 42067 ctgaaatatatttggaacctt 42047
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>emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on chromosome 6p23-24.3
              Contains the gene for a novel protein isentical to
              ribosomal protein L15 (RPL15), complete sequence
          Length = 190223

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 134    tggagatcattatcagttggtagat 158
              ||||||||||||||||| |||||||
Sbjct: 109599 tggagatcattatcagtaggtagat 109575
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>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence
          Length = 255667

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 307    gcagatgaaaatgaagatgct 327
              |||||||||||||||||||||
Sbjct: 136225 gcagatgaaaatgaagatgct 136205
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>gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, complete sequence
          Length = 151032

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 347   ggtgcaagtagtggaagctga 367
             |||||||||||||||||||||
Sbjct: 60783 ggtgcaagtagtggaagctga 60803
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>dbj|AK141454.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530024H20 product:Warning:
            possibly chimeric clone, full insert sequence
          Length = 3738

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 302  ttggtgcagatgaaaatgaagatgc 326
            |||| ||||||||||||||||||||
Sbjct: 1334 ttggcgcagatgaaaatgaagatgc 1310
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>dbj|AK165025.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130305J09 product:Hypothetical
           alpha/beta-Hydrolases structure containing protein, full
           insert sequence
          Length = 3221

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 302 ttggtgcagatgaaaatgaagatgc 326
           |||| ||||||||||||||||||||
Sbjct: 530 ttggcgcagatgaaaatgaagatgc 506
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>dbj|AK032569.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430598L15 product:hypothetical
           alpha/beta-Hydrolases structure containing protein, full
           insert sequence
          Length = 3715

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 302 ttggtgcagatgaaaatgaagatgc 326
           |||| ||||||||||||||||||||
Sbjct: 962 ttggcgcagatgaaaatgaagatgc 938
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>dbj|AK048673.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230001G05 product:hypothetical
           alpha/beta-Hydrolases structure containing protein, full
           insert sequence
          Length = 3512

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 302 ttggtgcagatgaaaatgaagatgc 326
           |||| ||||||||||||||||||||
Sbjct: 757 ttggcgcagatgaaaatgaagatgc 733
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>gb|AC156948.10| Mus musculus 10 BAC RP24-347D15 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 181617

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 302   ttggtgcagatgaaaatgaagatgc 326
             |||| ||||||||||||||||||||
Sbjct: 42769 ttggcgcagatgaaaatgaagatgc 42745
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>emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 in linkage group 2,
             complete sequence
          Length = 170771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   aaaatgaagatgctgaaaatg 334
             |||||||||||||||||||||
Sbjct: 15148 aaaatgaagatgctgaaaatg 15128
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>dbj|AK173299.1| Mus musculus mRNA for mKIAA1913 protein
          Length = 4115

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 302  ttggtgcagatgaaaatgaagatgc 326
            |||| ||||||||||||||||||||
Sbjct: 1362 ttggcgcagatgaaaatgaagatgc 1338
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>gb|BC048001.1| Mus musculus, clone IMAGE:6707334, mRNA
          Length = 525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 302 ttggtgcagatgaaaatgaagatgc 326
           |||| ||||||||||||||||||||
Sbjct: 217 ttggcgcagatgaaaatgaagatgc 241
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>ref|NM_029881.1| Mus musculus RIKEN cDNA C030003D03 gene (C030003D03Rik), mRNA
          Length = 3715

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 302 ttggtgcagatgaaaatgaagatgc 326
           |||| ||||||||||||||||||||
Sbjct: 962 ttggcgcagatgaaaatgaagatgc 938
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    gaagatgctgaaaatgcaaaa 339
              |||||||||||||||||||||
Sbjct: 394112 gaagatgctgaaaatgcaaaa 394092
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    gaagatgctgaaaatgcaaaa 339
              |||||||||||||||||||||
Sbjct: 915327 gaagatgctgaaaatgcaaaa 915307
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>gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, complete sequence
          Length = 198105

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    agatgaaaatgaagatgctga 329
              |||||||||||||||||||||
Sbjct: 189432 agatgaaaatgaagatgctga 189452



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    agatgaaaatgaagatgctga 329
              |||||||||||||||||||||
Sbjct: 117608 agatgaaaatgaagatgctga 117628
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>dbj|AB002338.1| Human mRNA for KIAA0340 gene, partial cds
          Length = 6395

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  ctgaaatatatttggaacctt 384
            |||||||||||||||||||||
Sbjct: 3336 ctgaaatatatttggaacctt 3316
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>dbj|AB045726.1| Homo sapiens Nbla00761 mRNA for RIM short form, complete cds
          Length = 6638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  ctgaaatatatttggaacctt 384
            |||||||||||||||||||||
Sbjct: 3579 ctgaaatatatttggaacctt 3559
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>ref|XM_642341.1| Dictyostelium discoideum hypothetical protein (DDB0189662), partial
            mRNA
          Length = 3546

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 303  tggtgcagatgaaaatgaagatgctgaaaatg 334
            ||||||||||||||||| || || ||||||||
Sbjct: 1587 tggtgcagatgaaaatggagctgatgaaaatg 1618
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>ref|XM_636453.1| Dictyostelium discoideum hypothetical protein (DDB0206027), partial
           mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 311 atgaaaatgaagatgctgaaaatg 334
           ||||||||||||||| ||||||||
Sbjct: 206 atgaaaatgaagatgatgaaaatg 229
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>ref|XM_630124.1| Dictyostelium discoideum hypothetical protein (DDB0183899), partial
            mRNA
          Length = 3219

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  gatgaaaatgaagatgctgaaaat 333
            |||||||||||||||| |||||||
Sbjct: 1564 gatgaaaatgaagatgatgaaaat 1587
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>gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome 3, complete sequence
          Length = 190599

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     attgattattcattgattga 94
              ||||||||||||||||||||
Sbjct: 111092 attgattattcattgattga 111111
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>gb|AC149266.1| Solanum demissum chromosome 5 clone PGEC872C13 map MAP_LOC, complete
             sequence
          Length = 100564

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   tgcagatgaaaatgaagatg 325
             ||||||||||||||||||||
Sbjct: 14664 tgcagatgaaaatgaagatg 14683
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>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tgattatgaagagagtatga 52
              ||||||||||||||||||||
Sbjct: 128070 tgattatgaagagagtatga 128051
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>gb|AY813278.1| Schistosoma japonicum SJCHGC05042 protein mRNA, complete cds
          Length = 1605

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   attgattattcattgattga 94
            ||||||||||||||||||||
Sbjct: 1382 attgattattcattgattga 1363
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gatgaaaatgaagatgctga 329
              ||||||||||||||||||||
Sbjct: 578665 gatgaaaatgaagatgctga 578646
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>ref|XM_816208.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510377.200) partial mRNA
          Length = 873

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 tgcagatgaaaatgaagatg 325
           ||||||||||||||||||||
Sbjct: 228 tgcagatgaaaatgaagatg 247
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>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20,
             complete sequence
          Length = 145825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 364   ctgaaatatatttggaaccttccaaaag 391
             |||||| |||||||||||||||| ||||
Sbjct: 75158 ctgaaagatatttggaaccttccgaaag 75185
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>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87
          Length = 196339

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    taactactaatgatgaagaa 279
              ||||||||||||||||||||
Sbjct: 164175 taactactaatgatgaagaa 164194
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>gb|AC113267.14| Papio anubis clone rp41-174i6, complete sequence
          Length = 154605

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 77   tgattattcattgattgagcagag 100
            |||||||||||||||||| |||||
Sbjct: 6546 tgattattcattgattgatcagag 6569
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>gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, complete sequence
          Length = 152306

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tatgatgaaacaattataat 67
              ||||||||||||||||||||
Sbjct: 142945 tatgatgaaacaattataat 142964
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>gb|AC171142.3| Cavia porcellus clone CH234-487I3, complete sequence
          Length = 106116

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   cagcaatgaccttccaaata 430
             ||||||||||||||||||||
Sbjct: 75147 cagcaatgaccttccaaata 75166
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>gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, complete sequence
          Length = 204340

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    tgattattcattgattgagcagag 100
             |||||||||||||||||| |||||
Sbjct: 76658 tgattattcattgattgatcagag 76635
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>gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    tgattattcattgattgagcagag 100
             |||||||||||||||||| |||||
Sbjct: 76658 tgattattcattgattgatcagag 76635
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>gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, complete sequence
          Length = 175283

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    tgaaaatgaagatgctgaaa 331
              ||||||||||||||||||||
Sbjct: 108486 tgaaaatgaagatgctgaaa 108467
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>gb|AC093046.1| Drosophila melanogaster, chromosome 2R, region 43D-43E, BAC clone
              BACR29D02, complete sequence
          Length = 158372

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tgcagatgaaaatgaagatg 325
              ||||||||||||||||||||
Sbjct: 157371 tgcagatgaaaatgaagatg 157390
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>gb|AC005042.2| Homo sapiens BAC clone RP11-552E1 from 2, complete sequence
          Length = 192219

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   acaaaataactactaatgat 273
             ||||||||||||||||||||
Sbjct: 51750 acaaaataactactaatgat 51731
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 364      ctgaaatatatttggaaccttccaaaag 391
                |||||| |||||||||||||||| ||||
Sbjct: 16114408 ctgaaagatatttggaaccttccgaaag 16114435
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>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone
              BACR04B09, complete sequence
          Length = 174707

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    tgcagatgaaaatgaagatg 325
              ||||||||||||||||||||
Sbjct: 134991 tgcagatgaaaatgaagatg 134972
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>gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete sequence
          Length = 160618

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    aagagagtatgatgaaacaa 60
             ||||||||||||||||||||
Sbjct: 53537 aagagagtatgatgaaacaa 53518
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>gb|DQ108883.1| Arabidopsis thaliana clone 92021 mRNA sequence
          Length = 681

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 taactactaatgatgaagaa 279
           ||||||||||||||||||||
Sbjct: 438 taactactaatgatgaagaa 457
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>emb|AL929219.16| Mouse DNA sequence from clone RP23-53I18 on chromosome 2, complete
              sequence
          Length = 164107

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 76     ttgattattcattgattgagcagaggag 103
              ||||||| ||| ||||||||||||||||
Sbjct: 125152 ttgattagtcaatgattgagcagaggag 125179
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>dbj|AK065155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B19, full
            insert sequence
          Length = 2814

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 364  ctgaaatatatttggaaccttccaaaag 391
            |||||| |||||||||||||||| ||||
Sbjct: 1428 ctgaaagatatttggaaccttccgaaag 1455
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>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
              complete sequence
          Length = 201932

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     atgaaacaattataatagcc 71
              ||||||||||||||||||||
Sbjct: 161365 atgaaacaattataatagcc 161346
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>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete
              sequence
          Length = 272100

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tgcagatgaaaatgaagatg 325
              ||||||||||||||||||||
Sbjct: 220292 tgcagatgaaaatgaagatg 220311
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>gb|AC119967.11| Mus musculus chromosome 10, clone RP24-473K14, complete sequence
          Length = 196661

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    caacaaaataactactaatg 271
              ||||||||||||||||||||
Sbjct: 115846 caacaaaataactactaatg 115865
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>emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 in linkage group 9,
             complete sequence
          Length = 172918

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    tgatgaaacaattataatag 69
             ||||||||||||||||||||
Sbjct: 56833 tgatgaaacaattataatag 56852
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gatgaaaatgaagatgctga 329
              ||||||||||||||||||||
Sbjct: 543503 gatgaaaatgaagatgctga 543484
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>gb|AC004283.1|AC004283 Drosophila melanogaster DNA sequence (P1 DS05557 (D152)), complete
             sequence
          Length = 80095

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   tgcagatgaaaatgaagatg 325
             ||||||||||||||||||||
Sbjct: 22456 tgcagatgaaaatgaagatg 22437
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>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F19F18 (ESSA project)
          Length = 91740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   taactactaatgatgaagaa 279
             ||||||||||||||||||||
Sbjct: 40753 taactactaatgatgaagaa 40772


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,404,949
Number of Sequences: 3902068
Number of extensions: 5404949
Number of successful extensions: 177758
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 177456
Number of HSP's gapped (non-prelim): 301
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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