>TGB2_WCMVO (P15404) TGB2 protein (Triple gene block 2 protein) (TGBp2) (13 kDa|
           protein) (ORF 3 protein)
          Length = 117

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 429 PRITHHLAN----PAYQMETKTISFFLQPIDAKASALLYSAYNILSVFSIMPHLSALHSQ 262
           P++  HL N      Y+  TKTI +F +P     S  L  ++N      I+  +  LH  
Sbjct: 36  PKVGDHLHNLPFGGEYKDGTKTIKYFQRPNQHSLSKTLAKSHNTTIFLIILGLIGTLHGL 95

Query: 261 YYLS 250
           +Y S
Sbjct: 96  HYFS 99

>OPTIX_DROME (Q95RW8) Protein Optix (Homeobox protein SIX3) (D-Six3)|
          Length = 487

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 20/88 (22%)
 Frame = +3

Query: 87  SPTQV--ILSNAXPRDEA*YSKNML---------------LEAAAATTPSQSSDSTLSGG 215
           +PTQV     N   RD A  +KN +                + AA+ TPS SSDS +S G
Sbjct: 196 NPTQVGNWFKNRRQRDRAAAAKNRIQHSQNSSGMGCRSRRADGAASPTPSDSSDSDISLG 255

Query: 216 NDG--PGAVTEESNSGNTEN-AKLRDEA 290
                P ++  + + G+T N A  R+E+
Sbjct: 256 THSPVPSSLQLQHSPGSTSNGANDREES 283

>SIS2_CANTR (Q12600) Protein SIS2 (Halotolerance protein HAL3)|
          Length = 531

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = +3

Query: 75  P*RRSPTQVILSNAXPRDEA*YSKNMLLEAAAATTPSQSSDSTLSGGNDGPGAVTEESNS 254
           P    P+ ++  +A    E+  +    + +AAA+  S        GG  G GA T  S++
Sbjct: 161 PQHSEPSSILNKDAIKSQESLRATTNSISSAAASNQSTPRSIISGGGGGGGGANTATSSN 220

Query: 255 GNTENAKL 278
             T N  L
Sbjct: 221 STTSNTAL 228

>T2R34_MOUSE (Q7TQB0) Putative taste receptor type 2 member 34 (T2R34)|
          Length = 298

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -1

Query: 420 THHLANPAYQMETKTISFFLQPIDAKASALLYSAYNILSVFSIMPHLSALHSQYYLSW 247
           TH  +  A+ M  K+++FFL         + Y++Y +L   S+  H+  +H  ++ +W
Sbjct: 213 THDYSTQAHIMALKSLAFFL---------IFYTSYTLLLTVSV-AHVINVHGSWHWAW 260

>AIP1_YEAST (P46680) Actin-interacting protein 1|
          Length = 615

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -1

Query: 309 LSVFSIMPHLSALHSQYYLSWTPPSRHQDHHSLLIMLSH 193
           ++  ++ P +S  +    + W+  S HQDH +L++ L +
Sbjct: 342 ITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380

>YD22_SCHPO (Q10250) Hypothetical protein C56F8.02 in chromosome I|
          Length = 1517

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 410 WPTQLTKWKPKLFHSFYNQLMPKLPPCSTPHTTYFLF 300
           WP  +  WK   F  F+ +   ++PP   P   Y  F
Sbjct: 293 WPKNVEWWKTNEFGGFHLKKKAEMPPLQVPDLAYIEF 329

>VP40_EBOZM (Q05128) Matrix protein VP40|
          Length = 326

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 159 EAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGNTENAKLR 281
           E   A  P +S+ +   GGN   G +T ES +G+T +  LR
Sbjct: 12  EYMEAIYPVRSNSTIARGGNSNTGFLTPESVNGDTPSNPLR 52

>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor) (Transcription coactivator p75)
           (LEDGF/p75)
          Length = 530

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 QSSDSTLSGGNDGPGAVTEESNSGNTENAKLRDEA 290
           Q+   TL+GG+D P +   + N  ++E +K + EA
Sbjct: 472 QTGSKTLNGGSDAPDSNQAQHNGDSSEESKDKHEA 506

>PUR4_RALSO (Q8XYN6) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1369

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 235 TAPGPSFPPDNVES---LL*EGVVAAAASNNIF 146
           TAPGP   PD + S   ++ EG +  AA NN F
Sbjct: 390 TAPGPVGKPDRIASPLQIMIEGPIGGAAFNNEF 422

>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1|
          Length = 1707

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 108 SVLPELDSSVTAPGPSLPXPDN 43
           +V+PE D  V++P PS+P P +
Sbjct: 193 TVVPESDEEVSSPAPSVPGPSS 214

>USP45_LACLC (P22865) Secreted 45 kDa protein precursor|
          Length = 461

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 108 SNAXPRDEA*YSKNMLLEAAAATTPSQSSDSTLSGGNDGPGAVTEESNSGNT 263
           SNA   + +  S N    ++++++ S SS ++ +GGN   G  T   N+G T
Sbjct: 285 SNASASNSSNSSSNSSSSSSSSSSSSSSSSNSNAGGNTNSG--TSTGNTGGT 334

>CK5P1_ARATH (Q8H0V1) CDK5RAP1-like protein|
          Length = 640

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 18/92 (19%)
 Frame = +3

Query: 165 AAATTPSQSSDSTLSGGNDGPGAVTEES------------------NSGNTENAKLRDEA 290
           A+ TTP   S+STL       G +  E+                  NSG  E     + A
Sbjct: 108 ASLTTPETESESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESA 167

Query: 291 *Y*KQKVCCMRSRARRKLWHQLVVERMK*FWF 386
                  C +R  A +++W     +R+  FWF
Sbjct: 168 EVIFVNTCAIRENAEQRVW-----QRLNYFWF 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,184,569
Number of Sequences: 219361
Number of extensions: 961315
Number of successful extensions: 3142
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3139
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)