>dbj|AK067511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H05, full
            insert sequence
          Length = 3871

 Score =  157 bits (79), Expect = 5e-35
 Identities = 219/265 (82%), Gaps = 3/265 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgattctgggaaagtggacacaaccgaaattagtaccgatcaggcaattcatcatccag 60
            |||||||||||||||  ||  |||| ||| ||||||| |||||  | | |||||| |  |
Sbjct: 2981 gtgattctgggaaagctgatgcaacagaagttagtactgatcactcgaatcatcaccagg 3040

                                                                        
Query: 61   atacaattgttaatgaagagcataggcagaagctaaggcagattgagattgctgtaatgc 120
            |||| ||| || |||||||||||||  ||||| ||||||||||||| |||||||| ||||
Sbjct: 3041 atacgattcttgatgaagagcatagaaagaagttaaggcagattgaaattgctgttatgc 3100

                                                                        
Query: 121  agtatcgtgattctctcgaggagaaggggctgcataacatggaggagattgagaggaagg 180
            |||||||||| ||||| |||||||||||  |||  ||||  || |||||||||| |||||
Sbjct: 3101 agtatcgtgaatctcttgaggagaagggtttgcgaaacacagaagagattgagaagaagg 3160

                                                                        
Query: 181  ttgccagccaccgtaggcgccttcaatctgatcatggtttgtc---ttcaatagacggtg 237
            ||||||||||||||||||| ||||| |||||  ||||||| ||   |||||  || ||||
Sbjct: 3161 ttgccagccaccgtaggcgtcttcagtctgaatatggtttatcattttcaaatgatggtg 3220

                                     
Query: 238  caaacaacagacggtcttctgagag 262
            |||||| ||| || |||||||||||
Sbjct: 3221 caaacagcaggcgctcttctgagag 3245



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/105 (86%), Gaps = 4/105 (3%)
 Strand = Plus / Plus

                                                                        
Query: 425  gagagacagggcacgtgaaaaaagctcaggccgagggaaggatgatcaccacgataggag 484
            ||||||||||| ||||||||||||| || ||||||||| |||||||||| | |||   ||
Sbjct: 3408 gagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactatgat---ag 3464

                                                         
Query: 485  cagcagagaccgggaaaaggacaggagaacggggaaggtgattga 529
             ||||||||| |||| |||||||||||||  ||||||||||||||
Sbjct: 3465 aagcagagacagggagaaggacaggagaa-agggaaggtgattga 3508



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                        
Query: 333  agcaggagccgtagtccttcaaggaagtcatcactggatagagatagagagtacagtcgc 392
            |||||||||||||||||| ||||||    ||||||||| |||||| ||||| ||| ||||
Sbjct: 3307 agcaggagccgtagtcctccaagga---gatcactggaaagagatcgagagcacaatcgc 3363

                   
Query: 393  agcagag 399
            | |||||
Sbjct: 3364 aacagag 3370

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                           
Query: 88      agaagctaaggcagattgagattgctgtaatgcagtatcgtgattctctcgaggagaagg 147
               ||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 4447550 agaagttaaggcagattgaaattgctgttatgcagtatcgtgaatctcttgaggagaagg 4447609

                                                                           
Query: 148     ggctgcataacatggaggagattgagaggaaggttgccagccaccgtaggcgccttcaat 207
               |  |||  ||||  || |||||||||| |||||||||||||||||||||||| ||||| |
Sbjct: 4447610 gtttgcgaaacacagaagagattgagaagaaggttgccagccaccgtaggcgtcttcagt 4447669

                            
Query: 208     ctgatcatggttt 220
               ||||  |||||||
Sbjct: 4447670 ctgaatatggttt 4447682



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/105 (86%), Gaps = 4/105 (3%)
 Strand = Plus / Plus

                                                                           
Query: 425     gagagacagggcacgtgaaaaaagctcaggccgagggaaggatgatcaccacgataggag 484
               ||||||||||| ||||||||||||| || ||||||||| |||||||||| | |||   ||
Sbjct: 4448077 gagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactatgat---ag 4448133

                                                            
Query: 485     cagcagagaccgggaaaaggacaggagaacggggaaggtgattga 529
                ||||||||| |||| |||||||||||||  ||||||||||||||
Sbjct: 4448134 aagcagagacagggagaaggacaggagaa-agggaaggtgattga 4448177



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                           
Query: 333     agcaggagccgtagtccttcaaggaagtcatcactggatagagatagagagtacagtcgc 392
               |||||||||||||||||| ||||||    ||||||||| |||||| ||||| ||| ||||
Sbjct: 4447976 agcaggagccgtagtcctccaagga---gatcactggaaagagatcgagagcacaatcgc 4448032

                      
Query: 393     agcagag 399
               | |||||
Sbjct: 4448033 aacagag 4448039



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 507      aggagaacggggaaggtgat 526
                ||||||||||||||||||||
Sbjct: 21861954 aggagaacggggaaggtgat 21861935

>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544B02
          Length = 156339

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                          
Query: 88     agaagctaaggcagattgagattgctgtaatgcagtatcgtgattctctcgaggagaagg 147
              ||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 131114 agaagttaaggcagattgaaattgctgttatgcagtatcgtgaatctcttgaggagaagg 131173

                                                                          
Query: 148    ggctgcataacatggaggagattgagaggaaggttgccagccaccgtaggcgccttcaat 207
              |  |||  ||||  || |||||||||| |||||||||||||||||||||||| ||||| |
Sbjct: 131174 gtttgcgaaacacagaagagattgagaagaaggttgccagccaccgtaggcgtcttcagt 131233

                           
Query: 208    ctgatcatggttt 220
              ||||  |||||||
Sbjct: 131234 ctgaatatggttt 131246



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/105 (86%), Gaps = 4/105 (3%)
 Strand = Plus / Plus

                                                                          
Query: 425    gagagacagggcacgtgaaaaaagctcaggccgagggaaggatgatcaccacgataggag 484
              ||||||||||| ||||||||||||| || ||||||||| |||||||||| | |||   ||
Sbjct: 131641 gagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactatgat---ag 131697

                                                           
Query: 485    cagcagagaccgggaaaaggacaggagaacggggaaggtgattga 529
               ||||||||| |||| |||||||||||||  ||||||||||||||
Sbjct: 131698 aagcagagacagggagaaggacaggagaa-agggaaggtgattga 131741



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 57/67 (85%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                          
Query: 333    agcaggagccgtagtccttcaaggaagtcatcactggatagagatagagagtacagtcgc 392
              |||||||||||||||||| ||||||    ||||||||| |||||| ||||| ||| ||||
Sbjct: 131540 agcaggagccgtagtcctccaagga---gatcactggaaagagatcgagagcacaatcgc 131596

                     
Query: 393    agcagag 399
              | |||||
Sbjct: 131597 aacagag 131603

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 438   cgtgaaaaaagctcaggccgagggaa 463
             ||||||||||||||| ||||||||||
Sbjct: 94822 cgtgaaaaaagctcaagccgagggaa 94797

>gb|BC095586.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor), mRNA (cDNA clone
           MGC:111894 IMAGE:7407967), complete cds
          Length = 2088

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 ctcgcagccgaagcaggagccgtag 346
           |||||||||| ||||||||||||||
Sbjct: 817 ctcgcagccggagcaggagccgtag 841

>gb|BC066682.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor), mRNA (cDNA clone
           MGC:76897 IMAGE:6521231), complete cds
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 ctcgcagccgaagcaggagccgtag 346
           |||||||||| ||||||||||||||
Sbjct: 800 ctcgcagccggagcaggagccgtag 824

>gb|BC056752.1| Danio rerio splicing factor, arginine/serine-rich 1 (splicing factor
            2, alternate splicing factor), mRNA (cDNA clone MGC:65898
            IMAGE:6801570), complete cds
          Length = 1860

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 322  ctcgcagccgaagcaggagccgtag 346
            |||||||||| ||||||||||||||
Sbjct: 1137 ctcgcagccggagcaggagccgtag 1161

>ref|NM_200593.2| Danio rerio splicing factor, arginine/serine-rich 1 (splicing
           factor 2, alternate splicing factor) (sfrs1), mRNA
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 ctcgcagccgaagcaggagccgtag 346
           |||||||||| ||||||||||||||
Sbjct: 800 ctcgcagccggagcaggagccgtag 824

>emb|AL929224.16| Zebrafish DNA sequence from clone CH211-232P9 in linkage group 21,
              complete sequence
          Length = 176879

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 322    ctcgcagccgaagcaggagccgtag 346
              |||||||||| ||||||||||||||
Sbjct: 170721 ctcgcagccggagcaggagccgtag 170697

>gb|AY602991.1| Oryza sativa (indica cultivar-group) ent-copalyl diphosphate
           synthase (CPSent2) mRNA, complete cds
          Length = 2784

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 aggagaacggggaaggtgat 526
           ||||||||||||||||||||
Sbjct: 848 aggagaacggggaaggtgat 829

>ref|XM_466350.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2403

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 aggagaacggggaaggtgat 526
           ||||||||||||||||||||
Sbjct: 644 aggagaacggggaaggtgat 625

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 409     atggcaatgacgccgggaga 428
               ||||||||||||||||||||
Sbjct: 3110829 atggcaatgacgccgggaga 3110810

>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    tctgatcatggtttgtcttc 226
              ||||||||||||||||||||
Sbjct: 232794 tctgatcatggtttgtcttc 232813

>gb|AC121578.2| Mus musculus BAC clone RP23-253I14 from 5, complete sequence
          Length = 125303

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    tcatcatccagatacaattg 69
             ||||||||||||||||||||
Sbjct: 41135 tcatcatccagatacaattg 41154

>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence
          Length = 155517

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ggagattgagaggaaggttg 183
             ||||||||||||||||||||
Sbjct: 71232 ggagattgagaggaaggttg 71251

>gb|AE008893.1| Salmonella typhimurium LT2, section 197 of 220 of the complete genome
          Length = 20178

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 404  attgcatggcaatgacgccgggag 427
            ||||||||||||||||||| ||||
Sbjct: 7791 attgcatggcaatgacgccaggag 7814

>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     tcatcatccagatacaattg 69
              ||||||||||||||||||||
Sbjct: 447194 tcatcatccagatacaattg 447213

>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 15/20
          Length = 264050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 404    attgcatggcaatgacgccgggag 427
              ||||||||||||||||||| ||||
Sbjct: 136539 attgcatggcaatgacgccaggag 136516

>gb|AY129964.1| Mus musculus strain C3H GPI-gamma 4 gene, complete cds
          Length = 65351

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   tcatcatccagatacaattg 69
            ||||||||||||||||||||
Sbjct: 3580 tcatcatccagatacaattg 3599

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 485     cagcagagaccgggaaaagg 504
               ||||||||||||||||||||
Sbjct: 1087379 cagcagagaccgggaaaagg 1087398



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 60      gatacaattgttaatgaaga 79
               ||||||||||||||||||||
Sbjct: 1054020 gatacaattgttaatgaaga 1054001

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 403     gattgcatggcaatgacgcc 422
               ||||||||||||||||||||
Sbjct: 5831653 gattgcatggcaatgacgcc 5831634

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 404     attgcatggcaatgacgccgggag 427
               ||||||||||||||||||| ||||
Sbjct: 4124412 attgcatggcaatgacgccaggag 4124435

>dbj|AB066271.1| Oryza sativa (japonica cultivar-group) OsCyc2 mRNA for ent-CDP
           synthase, complete cds
          Length = 2732

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 aggagaacggggaaggtgat 526
           ||||||||||||||||||||
Sbjct: 820 aggagaacggggaaggtgat 801

>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0008E01
          Length = 156856

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    aggagaacggggaaggtgat 526
              ||||||||||||||||||||
Sbjct: 154353 aggagaacggggaaggtgat 154334

>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689H05
          Length = 135803

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   aggagaacggggaaggtgat 526
             ||||||||||||||||||||
Sbjct: 45239 aggagaacggggaaggtgat 45220

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 404     attgcatggcaatgacgccgggag 427
               ||||||||||||||||||| ||||
Sbjct: 3586199 attgcatggcaatgacgccaggag 3586176

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 404     attgcatggcaatgacgccgggag 427
               ||||||||||||||||||| ||||
Sbjct: 4285031 attgcatggcaatgacgccaggag 4285054

>gb|AC111039.13| Mus musculus chromosome 5, clone RP24-463M5, complete sequence
          Length = 141949

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ggagattgagaggaaggttg 183
              ||||||||||||||||||||
Sbjct: 110151 ggagattgagaggaaggttg 110170

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 403     gattgcatggcaatgacgcc 422
               ||||||||||||||||||||
Sbjct: 5831646 gattgcatggcaatgacgcc 5831627

>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 169662

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   gattgcatggcaatgacgcc 422
             ||||||||||||||||||||
Sbjct: 27298 gattgcatggcaatgacgcc 27279

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 438   cgtgaaaaaagctcaggccgaggg 461
             ||||||||||||||| ||||||||
Sbjct: 93208 cgtgaaaaaagctcaagccgaggg 93185

>gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complete sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tctgatcatggtttgtcttc 226
              ||||||||||||||||||||
Sbjct: 130994 tctgatcatggtttgtcttc 130975


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,563,186
Number of Sequences: 3902068
Number of extensions: 4563186
Number of successful extensions: 82021
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81688
Number of HSP's gapped (non-prelim): 320
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)