ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YP95_YEAST (Q02891) Hypothetical UPF0017 protein YPL095c 62 1e-09
2EMB8_PICGL (Q40863) Embryogenesis-associated protein EMB8 60 4e-09
3YM60_YEAST (Q03649) Hypothetical UPF0017 protein YMR210w 51 2e-06
4YB27_YEAST (P38295) Hypothetical UPF0017 protein YBR177c 45 2e-04
5YHET_ECOLI (P45524) Hypothetical UPF0017 protein yheT 45 2e-04
6LBH2_HUMAN (P08910) Abhydrolase domain-containing protein 2 (Pro... 44 4e-04
7YYC5_CAEEL (Q18610) Hypothetical UPF0017 protein C44C1.5 in chro... 40 0.004
8DNAK2_SYNY3 (P22358) Chaperone protein dnaK2 (Heat shock protein... 40 0.007
9DNAK2_SYNEL (Q8DI58) Chaperone protein dnaK2 (Heat shock protein... 39 0.010
10A23D_DROME (Q24093) UPF0017 protein CG3488 37 0.048
11XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte ... 32 1.2
12PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC... 32 1.2
13LMP1_EBVC (P29362) Latent membrane protein 1 (LMP-1) (Protein p63) 32 2.0
14CN105_HUMAN (Q9NVL8) Protein C14orf105 32 2.0
15GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6) 31 2.6
16COQ2_CAEEL (Q8I7J4) Para-hydroxybenzoate--polyprenyltransferase,... 31 2.6
17NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1) 31 3.4
18C5AP_STRP3 (Q8K5Q0) C5a peptidase precursor (EC 3.4.21.-) (SCP) 30 4.5
19TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack ... 30 5.8
20GAGB1_HUMAN (O75459) G antigen family B 1 protein (Prostate-asso... 30 5.8
21CNGC8_ARATH (Q9FXH6) Putative cyclic nucleotide-gated ion channe... 30 5.8
22ZCC2_RAT (Q8K3Y6) Zinc finger CCCH type antiviral protein 1 (rZAP) 30 5.8
23ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger prote... 30 7.6
24NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurof... 30 7.6
25LCBA2_AERHY (Q848R7) Capsular polysaccharide phosphotransferase ... 30 7.6
26INAR2_BOVIN (Q95141) Interferon-alpha/beta receptor beta chain p... 30 7.6
27MURG_ENTHR (O07670) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 10.0
28MTMRD_HUMAN (Q86WG5) Myotubularin-related protein 13 (SET-bindin... 29 10.0
29ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor 29 10.0
30ZIC1_HUMAN (Q15915) Zinc finger protein ZIC 1 (Zinc finger prote... 29 10.0
31TGON2_MOUSE (Q62314) Trans-Golgi network integral membrane prote... 29 10.0
32CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor... 29 10.0

>YP95_YEAST (Q02891) Hypothetical UPF0017 protein YPL095c|
          Length = 456

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 30/78 (38%), Positives = 42/78 (53%)
 Frame = +3

Query: 24  TYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFF 203
           TYYR+ SS + + N+ +P L +NA DDPV     IP+ + R N  ++L  T  GGHLA+ 
Sbjct: 373 TYYRKASSINRLPNIKIPTLIINATDDPVTGENVIPYKQARENPCVLLCETDLGGHLAYL 432

Query: 204 QGLTAGKLWWVGAVSEFL 257
                   W     +EFL
Sbjct: 433 D--NESNSWLTKQAAEFL 448



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>EMB8_PICGL (Q40863) Embryogenesis-associated protein EMB8|
          Length = 457

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +3

Query: 15  TVDTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHL 194
           +V  YY   SS+  +  V   LLC+ A +DP+     IPW++ + N N +L  T NGGHL
Sbjct: 332 SVGDYYSNSSSSLSIKYVQTSLLCIQASNDPIAPSRGIPWEDIKENPNCLLVVTPNGGHL 391

Query: 195 AFFQGLTA--GKLWWVGAVSEFL 257
            +  G  A  G  W    V E+L
Sbjct: 392 GWVAGDDAPFGAPWTDPLVMEYL 414



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>YM60_YEAST (Q03649) Hypothetical UPF0017 protein YMR210w|
          Length = 449

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 24/84 (28%), Positives = 45/84 (53%)
 Frame = +3

Query: 21  DTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAF 200
           + YY+  SS   +  +  P + ++A DDP+   + +P D+ ++N   +L  T  GGH+ +
Sbjct: 337 EEYYKNASSYKRIPGIRTPFIALHAQDDPIVGGD-LPIDQIKSNPYTLLLETSTGGHVGW 395

Query: 201 FQGLTAGKLWWVGAVSEFLCALHD 272
           F+   +G+ W+   +  FL   HD
Sbjct: 396 FKD-RSGRRWYAEPLCRFLKIFHD 418



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>YB27_YEAST (P38295) Hypothetical UPF0017 protein YBR177c|
          Length = 451

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/76 (34%), Positives = 37/76 (48%)
 Frame = +3

Query: 27  YYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFFQ 206
           YY+  SS + V  + VP L +N+ DDPV   +  P+     N  I+   T  GGHLA+  
Sbjct: 370 YYKAASSINRVDTIRVPTLVINSRDDPVVGPDQ-PYSIVEKNPRILYCRTDLGGHLAYLD 428

Query: 207 GLTAGKLWWVGAVSEF 254
                  W   A++EF
Sbjct: 429 --KDNNSWATKAIAEF 442



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>YHET_ECOLI (P45524) Hypothetical UPF0017 protein yheT|
          Length = 340

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  YYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFFQ 206
           YYR+CS+   +  ++ P L ++A DDP    + IP  E      +    T++GGH+ F  
Sbjct: 255 YYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPE-SLPPQVEYQLTEHGGHVGFIG 313

Query: 207 G-LTAGKLWWVGAVSEFL 257
           G L   ++W    + ++L
Sbjct: 314 GTLLHPQMWLESRIPDWL 331



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>LBH2_HUMAN (P08910) Abhydrolase domain-containing protein 2 (Protein PHPS1-2)|
          Length = 425

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +3

Query: 27  YYRRCSSASFVGNVSVPLLCVNALDDPVCTRE--AIPWDECRANKNIVLATTQNGGHLAF 200
           YY   S   ++  + VPL+ VNA DDP+       IP       +N++     +GGHL F
Sbjct: 320 YYEEESCMRYLHRIYVPLMLVNAADDPLVHESLLTIPKSLSEKRENVMFVLPLHGGHLGF 379

Query: 201 FQG 209
           F+G
Sbjct: 380 FEG 382



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>YYC5_CAEEL (Q18610) Hypothetical UPF0017 protein C44C1.5 in chromosome X|
          Length = 375

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = +3

Query: 21  DTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAF 200
           D YYR+ + A+ V  + +P + +N++DD     E IP  +   +  +    T +GGH AF
Sbjct: 288 DDYYRQATLATKVDKIKIPCVTLNSVDDYFSPVECIPTLDIMESDYVCGIITNHGGHTAF 347

Query: 201 FQ 206
            +
Sbjct: 348 ME 349



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>DNAK2_SYNY3 (P22358) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat|
           shock 70 kDa protein 2) (HSP70-2)
          Length = 636

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 28/101 (27%), Positives = 44/101 (43%)
 Frame = +3

Query: 288 RQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQED 467
           +   E HVL    E + D     +   DG+  P    G P  ++T D+  N ++N T +D
Sbjct: 428 QSNVEIHVLQGEREMANDNKSLGTFRLDGI--PPAPRGVPQIEVTFDIDANGILNVTAKD 485

Query: 468 EQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYADKIR 590
               + ++ S+T A T+P     V    K+      ADK R
Sbjct: 486 RGTGKEQSISITGASTLP--DTEVDRMVKEAESNAAADKER 524



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>DNAK2_SYNEL (Q8DI58) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat|
           shock 70 kDa protein 2) (HSP70-2)
          Length = 640

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +3

Query: 300 EDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQEDEQAK 479
           E HVL    E + D     +   DG+  P    G P  ++T D+  N ++N T  D+   
Sbjct: 431 EIHVLQGEREMAADNKSLGTFRLDGI--PPAPRGVPQIEVTFDIDANGILNVTARDKGTG 488

Query: 480 EVENKSVTDADTVPAQ 527
           + ++ S+T A T+P +
Sbjct: 489 KQQSISITGASTLPKE 504



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>A23D_DROME (Q24093) UPF0017 protein CG3488|
          Length = 398

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 6   NMXTVDTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAI-PWDE-CRANKNIVLATTQ 179
           N  +    Y+  SS  +   +  P++ +NA DDP+   + + P  E     +N       
Sbjct: 296 NFPSTQELYKWSSSLFYFDTIKKPMIFINAKDDPLIPEDLLHPIKEYATTRQNTAYVEVA 355

Query: 180 NGGHLAFFQG 209
           +GGHL F++G
Sbjct: 356 HGGHLGFYEG 365



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>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +2

Query: 341 QEPVRQHPWRRNDSPGHKRRPPFQPDHR*SETKRRDKQHTRR*TSQGSGEQERHGCRHSA 520
           + P ++H ++ +DSP   RR    PDH  S       +H R  + +  G   R   RH  
Sbjct: 621 RRPHKKHAYK-DDSP---RRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRHRR 676

Query: 521 RSKPCSSR 544
           RS+   SR
Sbjct: 677 RSERSRSR 684



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>PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC 3.1.3.16)|
           (PP2C)
          Length = 491

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 471 QAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYADK 584
           Q++  ++KS TDA+T P+ S  V G A ++ +E  +DK
Sbjct: 234 QSEAKKSKSETDAETAPSSSSGVDGVATEEEDEDDSDK 271



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>LMP1_EBVC (P29362) Latent membrane protein 1 (LMP-1) (Protein p63)|
          Length = 404

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 12/113 (10%)
 Frame = +3

Query: 267 HDSSYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINE-----------GPPSS 413
           HD S  H Q+A D   H S  +S +   ++ + G G   P+ ++           GP   
Sbjct: 197 HDDSLPHPQQATDDSSHESDSNSNEGRHHLLVSGAGDGPPLCSQNLGAPGGGPDNGPQDP 256

Query: 414 QITDDLKPNAVINSTQEDEQAKE-VENKSVTDADTVPAQSPAVPGSAKQQGEE 569
             TDD  P    N+     Q  +  ++    D D      P  P +    G +
Sbjct: 257 DNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQ 309



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>CN105_HUMAN (Q9NVL8) Protein C14orf105|
          Length = 296

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 240 AVSEFLCALHDSSYMHRQKAEDHVLHSSLESS--IDKSPYVSILGDGMIAPVINEGPPSS 413
           A  E   +LH  + +++Q   DH    +L+S+   D    +++L D     ++N GP +S
Sbjct: 166 AQMELKKSLHGEARINKQSPRDHKAKKTLQSTPRNDDHDLLTMLPD----EILNRGPGNS 221

Query: 414 QITDDLKPNAVIN 452
           + T+ LK  AV N
Sbjct: 222 KDTEFLKHQAVNN 234



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>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)|
          Length = 1819

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +3

Query: 399  GPPSSQITDDLKPNAVINSTQEDEQAKEV----ENKSVTDADTVPAQSPAVPGSAKQQGE 566
            GP  S  T+DL PN  +NS QED  A+      E    + A+    +   + G A Q   
Sbjct: 1370 GPGRSGDTEDLSPNWPLNS-QEDTAAQSSPGRGEEAEASAAEAQGGEQAYLAGLAGQYHL 1428

Query: 567  ERYADKIRDAIAP 605
            ERY D       P
Sbjct: 1429 ERYPDSYESMSEP 1441



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>COQ2_CAEEL (Q8I7J4) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial|
           precursor (EC 2.5.1.-) (PHB:polyprenyltransferase)
          Length = 356

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
 Frame = +3

Query: 162 VLATTQNGGHL----AFFQGLTAGKLWWVGAVSEFLCALHDSSYMHRQKAED---HVLHS 320
           VL  T N G L    A    L++   +W+ A +     ++D+ Y H+ KA+D    V  +
Sbjct: 199 VLGLTFNWGALLGWCALKGDLSSSAPFWMYAAALQWTLIYDTIYAHQDKADDIMIGVKST 258

Query: 321 SLESSIDKSPYVSILGDGMIAPVINEGPPSSQ 416
           +L    D   ++S  G G +A +   G  S Q
Sbjct: 259 ALRLGADTKKWLSAFGVGTVASLTACGIASDQ 290



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>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)|
          Length = 1076

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
 Frame = +3

Query: 81  LCVNALDDPV----CTREAIPWDECRANKNI-VLATTQNGGHLAFFQGLTAGKLWWVGAV 245
           LC ++   P+    CTR+         N  + +L + +N  +   F   + G +W   A 
Sbjct: 154 LCTSSTPSPIKNGSCTRQLAGKSGEDTNVGLPILKSLKNRSNRKRFHSQSKGTVW--SAN 211

Query: 246 SEFLCALHDSSYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITD 425
            E+  + +D+      K ++       ++S +++   S + +G +A     GP  +   +
Sbjct: 212 FEYDLSEYDAIQKKDNKDKEGNAGGDQKTSENRNNIKSSISNGNLAT----GPNLTSEIE 267

Query: 426 DLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAK 554
           DL+ +   N     ++   ++  + T A T P Q   VP S +
Sbjct: 268 DLRADINSNRLSNPQKNLLLKGPASTVAKTAPIQESFVPNSER 310



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>C5AP_STRP3 (Q8K5Q0) C5a peptidase precursor (EC 3.4.21.-) (SCP)|
          Length = 1169

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 426 DLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAV-PGSAKQQGEERYADKIRDAIA 602
           D+K N V   T   EQA EV  ++    +   + S    P       EE  ADK  D +A
Sbjct: 28  DIKANTVTEDTPATEQAVEVPQQTAVSEEAPSSSSKETNPPQTPDDAEETVADKAND-LA 86

Query: 603 P 605
           P
Sbjct: 87  P 87



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>TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack p88)|
           (Repressor protein fushi tarazu)
          Length = 813

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 396 EGPPSSQITDDLKPNAVINSTQEDEQAKEVENKS 497
           E PP+++IT  + PNA +N+   +EQ+KE+  K+
Sbjct: 399 EVPPATRITGAVTPNAALNA---EEQSKEMPKKN 429



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>GAGB1_HUMAN (O75459) G antigen family B 1 protein (Prostate-associated gene 1|
           protein) (PAGE-1) (GAGE-9) (AL5)
          Length = 146

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +3

Query: 432 KPNAVINSTQE--DEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581
           +P   + S++E  DEQ  EVE+ + +  D+ PA+     G++  QG+E  AD
Sbjct: 12  RPMIYVESSEESSDEQPDEVESPTQSQ-DSTPAEEREDEGASAAQGQEPEAD 62



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>CNGC8_ARATH (Q9FXH6) Putative cyclic nucleotide-gated ion channel 8 (Cyclic|
           nucleotide- and calmodulin-regulated ion channel 8)
          Length = 753

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 IASLVQTGSSKAFTQSKGTDTLPTKLALLH 38
           +  L Q    K    SKGTD LPTK ALLH
Sbjct: 208 VLPLPQIAVWKFLHGSKGTDVLPTKQALLH 237



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>ZCC2_RAT (Q8K3Y6) Zinc finger CCCH type antiviral protein 1 (rZAP)|
          Length = 776

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 25/102 (24%), Positives = 44/102 (43%)
 Frame = +3

Query: 276 SYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINS 455
           ++  R K+ D  LH+SLE     SP VS LG          GPPS  +T   K +    S
Sbjct: 242 AHRDRSKSRDRFLHNSLEF---LSPVVSPLG---------SGPPSPDVT-SCKDSLEDVS 288

Query: 456 TQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581
               ++ K +          V +++  V G ++ +  + +++
Sbjct: 289 VDVTQKFKYLGTHDRAQLSPVSSKAAGVQGPSQMRASQEFSE 330



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>ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger protein of the|
           cerebellum 1) (ZIC-related-1 protein) (ZIC-R1)
           (ODD-paired-like)
          Length = 443

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = +3

Query: 252 FLCALHDSSYMHRQKAEDHV-LHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDD 428
           +LC + D SY H      H+ +H +       SP  S   +    P I      +Q T  
Sbjct: 358 YLCKMCDKSYTHPSSLRKHMKVHEASSQGSQPSPAASSGYESSTPPTIVSPSAENQSTSS 417

Query: 429 LKPNA 443
           L P++
Sbjct: 418 LSPSS 422



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>NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1072

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 411 SQITDDLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGE 566
           S + +++KP A + S ++ +   + E KS   A T+  +SP     AK++ +
Sbjct: 788 SPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTLDVKSPEAKTPAKEEAK 839



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>LCBA2_AERHY (Q848R7) Capsular polysaccharide phosphotransferase lcbA (EC|
           2.7.-.-) (Stealth protein lcbA)
          Length = 364

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/32 (56%), Positives = 19/32 (59%)
 Frame = -2

Query: 136 SQGIASLVQTGSSKAFTQSKGTDTLPTKLALL 41
           S GIASL  +  S A  Q KGTDT PT  A L
Sbjct: 195 SNGIASLFMSNKSLAIMQKKGTDT-PTLSASL 225



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>INAR2_BOVIN (Q95141) Interferon-alpha/beta receptor beta chain precursor|
           (IFN-alpha-REC) (Type I interferon receptor) (IFN-R)
           (Interferon alpha/beta receptor-2)
          Length = 530

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
 Frame = +3

Query: 42  SSASFVGNVSVPLLCVNALDD----------PVCTREAIPWDECRANKNIVLATTQNGGH 191
           S    V NV++  +CV AL+D          P C  E +  ++    ++ VL  ++ G  
Sbjct: 426 SEGRIVFNVNLNSVCVRALEDDKDSEVTLMSPSCPEETVELEDLNETESSVLVASEEGTQ 485

Query: 192 LAF 200
           L F
Sbjct: 486 LPF 488



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>MURG_ENTHR (O07670) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 360

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 594 RRGSYQRSVPRLAA-LRTLELQGFERALCLH 505
           +RG   + VP      RTLE+QGF+R L LH
Sbjct: 39  QRGLENKIVPETGMPFRTLEIQGFQRKLSLH 69



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>MTMRD_HUMAN (Q86WG5) Myotubularin-related protein 13 (SET-binding factor 2)|
          Length = 1849

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = +3

Query: 387 VINEGPPSSQITDDLKPNAVINSTQEDEQAKEV-----ENKSVTDADTVPAQSPAVPGSA 551
           V+  GPP   I D  K   V NS Q  E  +       ENK +    T+PA   A+ G A
Sbjct: 526 VVPAGPPVVSIMD--KVTTVFNSAQRLEVVRNCISFIFENKILETEKTLPAALRALKGKA 583

Query: 552 KQQ 560
            +Q
Sbjct: 584 ARQ 586



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>ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor|
          Length = 1119

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 11/51 (21%), Positives = 26/51 (50%)
 Frame = +3

Query: 405  PSSQITDDLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQ 557
            PS+ +   +  N+   ++     + ++EN+++    +V A SP +  SA +
Sbjct: 959  PSTNVKSSMDENSEFTTSTAASTSTDIENETIATTGSVEASSPIISSSADE 1009



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>ZIC1_HUMAN (Q15915) Zinc finger protein ZIC 1 (Zinc finger protein of the|
           cerebellum 1)
          Length = 447

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
 Frame = +3

Query: 252 FLCALHDSSYMHRQKAEDHV-LHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDD 428
           +LC + D SY H      H+ +H S       SP  S   +    P I      +  T  
Sbjct: 362 YLCKMCDKSYTHPSSVRKHMKVHESSSQGSQPSPAASSGYESSTPPTIVSPSTDNPTTSS 421

Query: 429 LKPNA 443
           L P++
Sbjct: 422 LSPSS 426



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>TGON2_MOUSE (Q62314) Trans-Golgi network integral membrane protein 2 precursor|
           (TGN38B)
          Length = 363

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +3

Query: 291 QKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQEDE 470
           +K +   L S  ES        ++ GD   +    +G  SS+ T+D++   +     E E
Sbjct: 207 EKGQKATLTSKTESG------ETLAGDSDFSLKPEKGDKSSEPTEDVETKEIEEGDTEPE 260

Query: 471 QAK--EVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581
           +    E EN+ V+   +   Q   +  S K + ++ Y D
Sbjct: 261 EGSPLEEENEKVSGPSSSENQEGTLTDSMKNEKDDLYKD 299



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>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor|
            (Flamingo homolog 2) (hFmi2)
          Length = 3014

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
 Frame = -1

Query: 605  GSDGVADLISVAFLALLLCGPWNCRALSGHCVCIRDALVLHFL--------GLFIFL--C 456
            G  G+  L+  AFL LLL    +   L G     RDAL  H+L        G F+ L  C
Sbjct: 2646 GKKGIVSLLRTAFLLLLLI---SATWLLGLLAVNRDALSFHYLFAIFSGLQGPFVLLFHC 2702

Query: 455  AVYHGVWFQIIGDLAGRGAFVYD 387
             +   V   + G L GR   + D
Sbjct: 2703 VLNQEVRKHLKGVLGGRKLHLED 2725


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,555,463
Number of Sequences: 219361
Number of extensions: 2150611
Number of successful extensions: 7156
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7147
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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