Clone Name | baak4o15 |
---|---|
Clone Library Name | barley_pub |
>YP95_YEAST (Q02891) Hypothetical UPF0017 protein YPL095c| Length = 456 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/78 (38%), Positives = 42/78 (53%) Frame = +3 Query: 24 TYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFF 203 TYYR+ SS + + N+ +P L +NA DDPV IP+ + R N ++L T GGHLA+ Sbjct: 373 TYYRKASSINRLPNIKIPTLIINATDDPVTGENVIPYKQARENPCVLLCETDLGGHLAYL 432 Query: 204 QGLTAGKLWWVGAVSEFL 257 W +EFL Sbjct: 433 D--NESNSWLTKQAAEFL 448
>EMB8_PICGL (Q40863) Embryogenesis-associated protein EMB8| Length = 457 Score = 60.5 bits (145), Expect = 4e-09 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Frame = +3 Query: 15 TVDTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHL 194 +V YY SS+ + V LLC+ A +DP+ IPW++ + N N +L T NGGHL Sbjct: 332 SVGDYYSNSSSSLSIKYVQTSLLCIQASNDPIAPSRGIPWEDIKENPNCLLVVTPNGGHL 391 Query: 195 AFFQGLTA--GKLWWVGAVSEFL 257 + G A G W V E+L Sbjct: 392 GWVAGDDAPFGAPWTDPLVMEYL 414
>YM60_YEAST (Q03649) Hypothetical UPF0017 protein YMR210w| Length = 449 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/84 (28%), Positives = 45/84 (53%) Frame = +3 Query: 21 DTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAF 200 + YY+ SS + + P + ++A DDP+ + +P D+ ++N +L T GGH+ + Sbjct: 337 EEYYKNASSYKRIPGIRTPFIALHAQDDPIVGGD-LPIDQIKSNPYTLLLETSTGGHVGW 395 Query: 201 FQGLTAGKLWWVGAVSEFLCALHD 272 F+ +G+ W+ + FL HD Sbjct: 396 FKD-RSGRRWYAEPLCRFLKIFHD 418
>YB27_YEAST (P38295) Hypothetical UPF0017 protein YBR177c| Length = 451 Score = 45.1 bits (105), Expect = 2e-04 Identities = 26/76 (34%), Positives = 37/76 (48%) Frame = +3 Query: 27 YYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFFQ 206 YY+ SS + V + VP L +N+ DDPV + P+ N I+ T GGHLA+ Sbjct: 370 YYKAASSINRVDTIRVPTLVINSRDDPVVGPDQ-PYSIVEKNPRILYCRTDLGGHLAYLD 428 Query: 207 GLTAGKLWWVGAVSEF 254 W A++EF Sbjct: 429 --KDNNSWATKAIAEF 442
>YHET_ECOLI (P45524) Hypothetical UPF0017 protein yheT| Length = 340 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = +3 Query: 27 YYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAFFQ 206 YYR+CS+ + ++ P L ++A DDP + IP E + T++GGH+ F Sbjct: 255 YYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPE-SLPPQVEYQLTEHGGHVGFIG 313 Query: 207 G-LTAGKLWWVGAVSEFL 257 G L ++W + ++L Sbjct: 314 GTLLHPQMWLESRIPDWL 331
>LBH2_HUMAN (P08910) Abhydrolase domain-containing protein 2 (Protein PHPS1-2)| Length = 425 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +3 Query: 27 YYRRCSSASFVGNVSVPLLCVNALDDPVCTRE--AIPWDECRANKNIVLATTQNGGHLAF 200 YY S ++ + VPL+ VNA DDP+ IP +N++ +GGHL F Sbjct: 320 YYEEESCMRYLHRIYVPLMLVNAADDPLVHESLLTIPKSLSEKRENVMFVLPLHGGHLGF 379 Query: 201 FQG 209 F+G Sbjct: 380 FEG 382
>YYC5_CAEEL (Q18610) Hypothetical UPF0017 protein C44C1.5 in chromosome X| Length = 375 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +3 Query: 21 DTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAIPWDECRANKNIVLATTQNGGHLAF 200 D YYR+ + A+ V + +P + +N++DD E IP + + + T +GGH AF Sbjct: 288 DDYYRQATLATKVDKIKIPCVTLNSVDDYFSPVECIPTLDIMESDYVCGIITNHGGHTAF 347 Query: 201 FQ 206 + Sbjct: 348 ME 349
>DNAK2_SYNY3 (P22358) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 636 Score = 39.7 bits (91), Expect = 0.007 Identities = 28/101 (27%), Positives = 44/101 (43%) Frame = +3 Query: 288 RQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQED 467 + E HVL E + D + DG+ P G P ++T D+ N ++N T +D Sbjct: 428 QSNVEIHVLQGEREMANDNKSLGTFRLDGI--PPAPRGVPQIEVTFDIDANGILNVTAKD 485 Query: 468 EQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYADKIR 590 + ++ S+T A T+P V K+ ADK R Sbjct: 486 RGTGKEQSISITGASTLP--DTEVDRMVKEAESNAAADKER 524
>DNAK2_SYNEL (Q8DI58) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 640 Score = 39.3 bits (90), Expect = 0.010 Identities = 22/76 (28%), Positives = 37/76 (48%) Frame = +3 Query: 300 EDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQEDEQAK 479 E HVL E + D + DG+ P G P ++T D+ N ++N T D+ Sbjct: 431 EIHVLQGEREMAADNKSLGTFRLDGI--PPAPRGVPQIEVTFDIDANGILNVTARDKGTG 488 Query: 480 EVENKSVTDADTVPAQ 527 + ++ S+T A T+P + Sbjct: 489 KQQSISITGASTLPKE 504
>A23D_DROME (Q24093) UPF0017 protein CG3488| Length = 398 Score = 37.0 bits (84), Expect = 0.048 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = +3 Query: 6 NMXTVDTYYRRCSSASFVGNVSVPLLCVNALDDPVCTREAI-PWDE-CRANKNIVLATTQ 179 N + Y+ SS + + P++ +NA DDP+ + + P E +N Sbjct: 296 NFPSTQELYKWSSSLFYFDTIKKPMIFINAKDDPLIPEDLLHPIKEYATTRQNTAYVEVA 355 Query: 180 NGGHLAFFQG 209 +GGHL F++G Sbjct: 356 HGGHLGFYEG 365
>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface| antigen) (721P) (Protein XE7) Length = 695 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +2 Query: 341 QEPVRQHPWRRNDSPGHKRRPPFQPDHR*SETKRRDKQHTRR*TSQGSGEQERHGCRHSA 520 + P ++H ++ +DSP RR PDH S +H R + + G R RH Sbjct: 621 RRPHKKHAYK-DDSP---RRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRHRR 676 Query: 521 RSKPCSSR 544 RS+ SR Sbjct: 677 RSERSRSR 684
>PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC 3.1.3.16)| (PP2C) Length = 491 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +3 Query: 471 QAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYADK 584 Q++ ++KS TDA+T P+ S V G A ++ +E +DK Sbjct: 234 QSEAKKSKSETDAETAPSSSSGVDGVATEEEDEDDSDK 271
>LMP1_EBVC (P29362) Latent membrane protein 1 (LMP-1) (Protein p63)| Length = 404 Score = 31.6 bits (70), Expect = 2.0 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 12/113 (10%) Frame = +3 Query: 267 HDSSYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINE-----------GPPSS 413 HD S H Q+A D H S +S + ++ + G G P+ ++ GP Sbjct: 197 HDDSLPHPQQATDDSSHESDSNSNEGRHHLLVSGAGDGPPLCSQNLGAPGGGPDNGPQDP 256 Query: 414 QITDDLKPNAVINSTQEDEQAKE-VENKSVTDADTVPAQSPAVPGSAKQQGEE 569 TDD P N+ Q + ++ D D P P + G + Sbjct: 257 DNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQ 309
>CN105_HUMAN (Q9NVL8) Protein C14orf105| Length = 296 Score = 31.6 bits (70), Expect = 2.0 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = +3 Query: 240 AVSEFLCALHDSSYMHRQKAEDHVLHSSLESS--IDKSPYVSILGDGMIAPVINEGPPSS 413 A E +LH + +++Q DH +L+S+ D +++L D ++N GP +S Sbjct: 166 AQMELKKSLHGEARINKQSPRDHKAKKTLQSTPRNDDHDLLTMLPD----EILNRGPGNS 221 Query: 414 QITDDLKPNAVIN 452 + T+ LK AV N Sbjct: 222 KDTEFLKHQAVNN 234
>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)| Length = 1819 Score = 31.2 bits (69), Expect = 2.6 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = +3 Query: 399 GPPSSQITDDLKPNAVINSTQEDEQAKEV----ENKSVTDADTVPAQSPAVPGSAKQQGE 566 GP S T+DL PN +NS QED A+ E + A+ + + G A Q Sbjct: 1370 GPGRSGDTEDLSPNWPLNS-QEDTAAQSSPGRGEEAEASAAEAQGGEQAYLAGLAGQYHL 1428 Query: 567 ERYADKIRDAIAP 605 ERY D P Sbjct: 1429 ERYPDSYESMSEP 1441
>COQ2_CAEEL (Q8I7J4) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial| precursor (EC 2.5.1.-) (PHB:polyprenyltransferase) Length = 356 Score = 31.2 bits (69), Expect = 2.6 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = +3 Query: 162 VLATTQNGGHL----AFFQGLTAGKLWWVGAVSEFLCALHDSSYMHRQKAED---HVLHS 320 VL T N G L A L++ +W+ A + ++D+ Y H+ KA+D V + Sbjct: 199 VLGLTFNWGALLGWCALKGDLSSSAPFWMYAAALQWTLIYDTIYAHQDKADDIMIGVKST 258 Query: 321 SLESSIDKSPYVSILGDGMIAPVINEGPPSSQ 416 +L D ++S G G +A + G S Q Sbjct: 259 ALRLGADTKKWLSAFGVGTVASLTACGIASDQ 290
>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)| Length = 1076 Score = 30.8 bits (68), Expect = 3.4 Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 5/163 (3%) Frame = +3 Query: 81 LCVNALDDPV----CTREAIPWDECRANKNI-VLATTQNGGHLAFFQGLTAGKLWWVGAV 245 LC ++ P+ CTR+ N + +L + +N + F + G +W A Sbjct: 154 LCTSSTPSPIKNGSCTRQLAGKSGEDTNVGLPILKSLKNRSNRKRFHSQSKGTVW--SAN 211 Query: 246 SEFLCALHDSSYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITD 425 E+ + +D+ K ++ ++S +++ S + +G +A GP + + Sbjct: 212 FEYDLSEYDAIQKKDNKDKEGNAGGDQKTSENRNNIKSSISNGNLAT----GPNLTSEIE 267 Query: 426 DLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAK 554 DL+ + N ++ ++ + T A T P Q VP S + Sbjct: 268 DLRADINSNRLSNPQKNLLLKGPASTVAKTAPIQESFVPNSER 310
>C5AP_STRP3 (Q8K5Q0) C5a peptidase precursor (EC 3.4.21.-) (SCP)| Length = 1169 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +3 Query: 426 DLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAV-PGSAKQQGEERYADKIRDAIA 602 D+K N V T EQA EV ++ + + S P EE ADK D +A Sbjct: 28 DIKANTVTEDTPATEQAVEVPQQTAVSEEAPSSSSKETNPPQTPDDAEETVADKAND-LA 86 Query: 603 P 605 P Sbjct: 87 P 87
>TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack p88)| (Repressor protein fushi tarazu) Length = 813 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/34 (41%), Positives = 24/34 (70%) Frame = +3 Query: 396 EGPPSSQITDDLKPNAVINSTQEDEQAKEVENKS 497 E PP+++IT + PNA +N+ +EQ+KE+ K+ Sbjct: 399 EVPPATRITGAVTPNAALNA---EEQSKEMPKKN 429
>GAGB1_HUMAN (O75459) G antigen family B 1 protein (Prostate-associated gene 1| protein) (PAGE-1) (GAGE-9) (AL5) Length = 146 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = +3 Query: 432 KPNAVINSTQE--DEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581 +P + S++E DEQ EVE+ + + D+ PA+ G++ QG+E AD Sbjct: 12 RPMIYVESSEESSDEQPDEVESPTQSQ-DSTPAEEREDEGASAAQGQEPEAD 62
>CNGC8_ARATH (Q9FXH6) Putative cyclic nucleotide-gated ion channel 8 (Cyclic| nucleotide- and calmodulin-regulated ion channel 8) Length = 753 Score = 30.0 bits (66), Expect = 5.8 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -2 Query: 127 IASLVQTGSSKAFTQSKGTDTLPTKLALLH 38 + L Q K SKGTD LPTK ALLH Sbjct: 208 VLPLPQIAVWKFLHGSKGTDVLPTKQALLH 237
>ZCC2_RAT (Q8K3Y6) Zinc finger CCCH type antiviral protein 1 (rZAP)| Length = 776 Score = 30.0 bits (66), Expect = 5.8 Identities = 25/102 (24%), Positives = 44/102 (43%) Frame = +3 Query: 276 SYMHRQKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINS 455 ++ R K+ D LH+SLE SP VS LG GPPS +T K + S Sbjct: 242 AHRDRSKSRDRFLHNSLEF---LSPVVSPLG---------SGPPSPDVT-SCKDSLEDVS 288 Query: 456 TQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581 ++ K + V +++ V G ++ + + +++ Sbjct: 289 VDVTQKFKYLGTHDRAQLSPVSSKAAGVQGPSQMRASQEFSE 330
>ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger protein of the| cerebellum 1) (ZIC-related-1 protein) (ZIC-R1) (ODD-paired-like) Length = 443 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Frame = +3 Query: 252 FLCALHDSSYMHRQKAEDHV-LHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDD 428 +LC + D SY H H+ +H + SP S + P I +Q T Sbjct: 358 YLCKMCDKSYTHPSSLRKHMKVHEASSQGSQPSPAASSGYESSTPPTIVSPSAENQSTSS 417 Query: 429 LKPNA 443 L P++ Sbjct: 418 LSPSS 422
>NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1072 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/52 (26%), Positives = 28/52 (53%) Frame = +3 Query: 411 SQITDDLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQQGE 566 S + +++KP A + S ++ + + E KS A T+ +SP AK++ + Sbjct: 788 SPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTLDVKSPEAKTPAKEEAK 839
>LCBA2_AERHY (Q848R7) Capsular polysaccharide phosphotransferase lcbA (EC| 2.7.-.-) (Stealth protein lcbA) Length = 364 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = -2 Query: 136 SQGIASLVQTGSSKAFTQSKGTDTLPTKLALL 41 S GIASL + S A Q KGTDT PT A L Sbjct: 195 SNGIASLFMSNKSLAIMQKKGTDT-PTLSASL 225
>INAR2_BOVIN (Q95141) Interferon-alpha/beta receptor beta chain precursor| (IFN-alpha-REC) (Type I interferon receptor) (IFN-R) (Interferon alpha/beta receptor-2) Length = 530 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 10/63 (15%) Frame = +3 Query: 42 SSASFVGNVSVPLLCVNALDD----------PVCTREAIPWDECRANKNIVLATTQNGGH 191 S V NV++ +CV AL+D P C E + ++ ++ VL ++ G Sbjct: 426 SEGRIVFNVNLNSVCVRALEDDKDSEVTLMSPSCPEETVELEDLNETESSVLVASEEGTQ 485 Query: 192 LAF 200 L F Sbjct: 486 LPF 488
>MURG_ENTHR (O07670) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 360 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -3 Query: 594 RRGSYQRSVPRLAA-LRTLELQGFERALCLH 505 +RG + VP RTLE+QGF+R L LH Sbjct: 39 QRGLENKIVPETGMPFRTLEIQGFQRKLSLH 69
>MTMRD_HUMAN (Q86WG5) Myotubularin-related protein 13 (SET-binding factor 2)| Length = 1849 Score = 29.3 bits (64), Expect = 10.0 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = +3 Query: 387 VINEGPPSSQITDDLKPNAVINSTQEDEQAKEV-----ENKSVTDADTVPAQSPAVPGSA 551 V+ GPP I D K V NS Q E + ENK + T+PA A+ G A Sbjct: 526 VVPAGPPVVSIMD--KVTTVFNSAQRLEVVRNCISFIFENKILETEKTLPAALRALKGKA 583 Query: 552 KQQ 560 +Q Sbjct: 584 ARQ 586
>ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor| Length = 1119 Score = 29.3 bits (64), Expect = 10.0 Identities = 11/51 (21%), Positives = 26/51 (50%) Frame = +3 Query: 405 PSSQITDDLKPNAVINSTQEDEQAKEVENKSVTDADTVPAQSPAVPGSAKQ 557 PS+ + + N+ ++ + ++EN+++ +V A SP + SA + Sbjct: 959 PSTNVKSSMDENSEFTTSTAASTSTDIENETIATTGSVEASSPIISSSADE 1009
>ZIC1_HUMAN (Q15915) Zinc finger protein ZIC 1 (Zinc finger protein of the| cerebellum 1) Length = 447 Score = 29.3 bits (64), Expect = 10.0 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Frame = +3 Query: 252 FLCALHDSSYMHRQKAEDHV-LHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDD 428 +LC + D SY H H+ +H S SP S + P I + T Sbjct: 362 YLCKMCDKSYTHPSSVRKHMKVHESSSQGSQPSPAASSGYESSTPPTIVSPSTDNPTTSS 421 Query: 429 LKPNA 443 L P++ Sbjct: 422 LSPSS 426
>TGON2_MOUSE (Q62314) Trans-Golgi network integral membrane protein 2 precursor| (TGN38B) Length = 363 Score = 29.3 bits (64), Expect = 10.0 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 2/99 (2%) Frame = +3 Query: 291 QKAEDHVLHSSLESSIDKSPYVSILGDGMIAPVINEGPPSSQITDDLKPNAVINSTQEDE 470 +K + L S ES ++ GD + +G SS+ T+D++ + E E Sbjct: 207 EKGQKATLTSKTESG------ETLAGDSDFSLKPEKGDKSSEPTEDVETKEIEEGDTEPE 260 Query: 471 QAK--EVENKSVTDADTVPAQSPAVPGSAKQQGEERYAD 581 + E EN+ V+ + Q + S K + ++ Y D Sbjct: 261 EGSPLEEENEKVSGPSSSENQEGTLTDSMKNEKDDLYKD 299
>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| (Flamingo homolog 2) (hFmi2) Length = 3014 Score = 29.3 bits (64), Expect = 10.0 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Frame = -1 Query: 605 GSDGVADLISVAFLALLLCGPWNCRALSGHCVCIRDALVLHFL--------GLFIFL--C 456 G G+ L+ AFL LLL + L G RDAL H+L G F+ L C Sbjct: 2646 GKKGIVSLLRTAFLLLLLI---SATWLLGLLAVNRDALSFHYLFAIFSGLQGPFVLLFHC 2702 Query: 455 AVYHGVWFQIIGDLAGRGAFVYD 387 + V + G L GR + D Sbjct: 2703 VLNQEVRKHLKGVLGGRKLHLED 2725 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,555,463 Number of Sequences: 219361 Number of extensions: 2150611 Number of successful extensions: 7156 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 6854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7147 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)