ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4o21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin Length = 2244 Score = 406 bits (205), Expect = e-110 Identities = 280/305 (91%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||||||||| |||||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 1655 aggctccgcgcccaggcgacgtacaaggtgaagctggtgacgcccgagggcgaggtggag 1714 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1715 ctggaggtccccgatgacgtctacatcctcgaccaggccgaggaggaggggatcgacctg 1774 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| || Sbjct: 1775 ccctactcctgccgcgccggctcctgctcctcctgcgccggcaagttggtgtccggcgag 1834 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1835 atcgaccagtccgaccagagcttcctcgacgacgaccagatggaggcagggtgggtgctc 1894 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggagctc 322 |||||| ||| ||||||| || ||| ||||||||||||| |||||||||||||||||| Sbjct: 1895 acctgccacgcctaccccaagtccgacatcgtcatcgagacccacaaggaggaggagctc 1954 Query: 323 accgc 327 ||||| Sbjct: 1955 accgc 1959
>gb|AY103722.1| Zea mays PCO142214 mRNA sequence Length = 938 Score = 333 bits (168), Expect = 3e-88 Identities = 270/304 (88%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||| ||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 389 aggctgcgcgcgcaggccacctacaacgtgaagctgatcacgccggagggggaggtggag 448 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 || |||| ||||||||||| |||||||| ||||| ||||||||||| || ||||||||| Sbjct: 449 ctgcaggtgcccgacgacgtgtacatcctggaccaggccgaggaggacggcatcgacctg 508 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 509 ccctactcctgccgcgcggggtcctgctcctcctgcgccggcaaggtcgtctccggctcc 568 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 ||||||||||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 569 gtggaccagtccgaccagagctacctcgacgacggccagatcgccgccggctgggtgctc 628 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggagctc 322 |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||| Sbjct: 629 acctgccacgcctaccccacctctgacgtcgtcatcgagacgcacaaggaggaggagctc 688 Query: 323 accg 326 |||| Sbjct: 689 accg 692
>gb|M73828.1|MZEFD5 Maize ferredoxin (Fd) isoprotein mRNA, pFD5 Length = 616 Score = 319 bits (161), Expect = 5e-84 Identities = 260/293 (88%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||| ||||||||||| || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 138 aggctgcgcgcgcaggccacctacaacgtgaagctcatcacgccggagggggaggtggag 197 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 || |||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||| Sbjct: 198 ctgcaggtgcccgacgacgtctacatcctggactacgccgaggaggaaggcatcgacctg 257 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 258 ccctactcctgccgcgcggggtcctgctcctcctgcgccggcaaggtcgtctccggctcc 317 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 || |||||||||||||||||||||||||||||| |||| ||| | || ||||||||| Sbjct: 318 ctcgaccagtccgaccagagcttcctcgacgacagccaggtcgccgacggctgggtgctc 377 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 378 acctgcgttgcgtaccccacctccgacgtcgtcatcgagacacacaaggagga 430
>gb|M73830.1|MZEFD1P Maize ferredoxin I (Fd) isoprotein mRNA, pFD1' Length = 757 Score = 317 bits (160), Expect = 2e-83 Identities = 268/304 (88%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||| ||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 230 aggctgcgcgcgcaggccacctacaacgtgaagctgatcacgccggagggggaggtggag 289 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 || |||| ||||||||||| |||||||| ||||| ||||||||||| || ||||||||| Sbjct: 290 ctgcaggtgcccgacgacgtgtacatcctggaccaggccgaggaggacggcatcgacctg 349 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||| || ||||||||||| |||||||| ||||| ||||||||| Sbjct: 350 ccctactcctgccgcgcggggtcctgctcctcgtgcgccggcaaggtcgtctccggctcc 409 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 ||||||||||||||||||||| ||||||||||| |||||||| | || ||||||||| Sbjct: 410 gtggaccagtccgaccagagctacctcgacgacggccagatcgccgacggctgggtgctc 469 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggagctc 322 |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||| Sbjct: 470 acctgccacgcctaccccacctctgacgtcgtcatcgagacgcacaaggaggaggagctc 529 Query: 323 accg 326 |||| Sbjct: 530 accg 533
>gb|M73829.1|MZEFD1 Maize ferredoxin I (Fd) isoprotein mRNA, pFD1 Length = 684 Score = 309 bits (156), Expect = 4e-81 Identities = 267/304 (87%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||| ||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 180 aggctgcgcgcgcaggccacctacaacgtgaagctgatcacgccagagggggaggtggag 239 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 || |||| ||||||||||| |||||||| ||||| ||||||||||| || ||||||||| Sbjct: 240 ctgcaggtgcccgacgacgtgtacatcctggaccaggccgaggaggacggcatcgacctg 299 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||| || ||||||||||| |||||||| ||||| ||||||||| Sbjct: 300 ccctactcctgccgcgcggggtcctgctcctcgtgcgccggcaaggtcgtctccggctcc 359 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 ||||||||||||||||||||| ||||||||||| |||||||| | || ||||||||| Sbjct: 360 gtggaccagtccgaccagagctacctcgacgacggccagatcgccgacggctgggtgctc 419 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggagctc 322 |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||| Sbjct: 420 acctgccacgcctaccccacctctgacgtcgtcatcgagacgcacaaggaggaggagctc 479 Query: 323 accg 326 |||| Sbjct: 480 accg 483
>ref|XM_479678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 736 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 208 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 267 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 268 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 327 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 328 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 387 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 388 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 447 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 448 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 489
>ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 737 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 209 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 268 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 269 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 328 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 329 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 388 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 389 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 448 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 449 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 490
>ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 737 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 209 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 268 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 269 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 328 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 329 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 388 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 389 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 448 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 449 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 490
>ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA Length = 848 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 210 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 269 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 270 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 329 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 330 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 389 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 390 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 449 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 450 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 491
>gb|AY072818.1| Oryza sativa anti-disease protein 1 (ADI1) mRNA, complete cds Length = 729 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 185 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 244 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 245 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 304 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 305 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 364 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 365 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 424 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 425 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 466
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 236073 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 236014 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 236013 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 235954 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 235953 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 235894 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 235893 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 235834 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 235833 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 235792
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Minus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 2499 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 2440 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 2439 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 2380 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 2379 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 2320 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 2319 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 2260 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 2259 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 2218
>dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A06, full insert sequence Length = 848 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 210 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 269 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 270 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 329 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 330 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 389 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 390 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 449 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 450 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 491
>dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E09, full insert sequence Length = 736 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 208 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 267 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 268 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 327 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 328 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 387 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 388 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 447 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 448 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 489
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 210 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 269 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 270 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 329 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 330 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 389 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 390 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 449 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 450 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 491
>dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D12, full insert sequence Length = 746 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 218 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 277 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 278 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 337 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 338 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 397 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 398 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 457 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 458 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 499
>dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA for ferredoxin, complete cds Length = 755 Score = 297 bits (150), Expect = 2e-77 Identities = 249/282 (88%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 203 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 262 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 263 ggacgacgtgtacatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 322 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 323 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 382 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 383 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 442 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 443 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 484
>dbj|AB016810.1| Zea mays mRNA for ferredoxin, complete cds Length = 765 Score = 291 bits (147), Expect = 1e-75 Identities = 252/287 (87%) Strand = Plus / Plus Query: 29 cgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgag 88 ||||||||||| || ||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 183 cgcgcgcaggccacctacaacgtgaagctgatcacgccggagggggaggtggagctgcag 242 Query: 89 gtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctac 148 || ||||||||||||||||| || ||| ||||||||||||||| ||||||||||||| | Sbjct: 243 gtgcccgacgacgtctacatactggacttcgccgaggaggaaggcatcgacctgcccttc 302 Query: 149 tcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggac 208 ||||||||||| || |||||||||||||||||||| ||||| ||||||||| | ||| Sbjct: 303 tcctgccgcgcggggtcctgctcctcctgcgccggcaaggtcgtctccggctccgtcgac 362 Query: 209 cagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgc 268 ||||||||||||||||||||| ||||| ||||| ||| | || ||||||||||||||| Sbjct: 363 cagtccgaccagagcttcctcaacgacaaccaggtcgccgacggctgggtgctcacctgc 422 Query: 269 gccgcgtaccccacctcggacctcgtcatcgagacacacaaggagga 315 || |||||||||||||| ||| ||||||||||||| ||||||||||| Sbjct: 423 gctgcgtaccccacctccgacgtcgtcatcgagacgcacaaggagga 469
>dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C09, full insert sequence Length = 737 Score = 289 bits (146), Expect = 4e-75 Identities = 248/282 (87%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 209 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggagctgcaggtgcc 268 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 |||||||| |||||||| | ||| || ||||||||||||||||||||||| |||||||| Sbjct: 269 ggacgacgtgtacatcctgggccaggcggaggaggaagggatcgacctgccttactcctg 328 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtc 213 |||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||||| Sbjct: 329 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggcgagatcgaccagtc 388 Query: 214 cgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgc 273 |||||||||||||||||||||||||||| | | || || ||||| ||||||||| ||| Sbjct: 389 cgaccagagcttcctcgacgacgaccaggttgccgccggctgggtcctcacctgccacgc 448 Query: 274 gtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 449 ctaccccaagtccgacgtcgtcatcgagacccacaaggagga 490
>gb|AY108480.1| Zea mays PCO090770 mRNA sequence Length = 737 Score = 208 bits (105), Expect = 1e-50 Identities = 246/293 (83%) Strand = Plus / Plus Query: 23 aggctccgcgcgcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggac 82 ||||| ||||||||||| || |||| || ||||| ||||||||||| || ||||| | Sbjct: 268 aggctgcgcgcgcaggccacccacaacgtcaagctcatcacgccggacggggaggtacag 327 Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 ||| || | |||| ||||||||||||||| ||||| |||||||| |||| | |||||| Sbjct: 328 ctcaagatgcccggcgacgtctacatcctggaccatgccgaggaacgagggttggacctg 387 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 ||||||||||||||||||||| ||||||||||||||| ||| ||| | ||||||||| Sbjct: 388 ccctactcctgccgcgccggcgcctgctcctcctgcgtcggcaagatcgtctccggctcc 447 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||| |||||||||||||||||||||||||||| ||| | ||| | |||||| Sbjct: 448 gtcaaccagttcgaccagagcttcctcgacgacgaccaggtcgccgagggctttgtgctc 507 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagga 315 |||||| ||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 508 acctgcatcgcctaccccacctcggacctcgtcatccagacgcacaaggagga 560
>gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds Length = 849 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 34 gcaggcgacgtacaaggtgaagctgatcacgccggagggcgaggtggacctcgaggtccc 93 ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||| || Sbjct: 203 gcaggcgacgtacaacgtgaagctgatcacaccggacggcgaggtggaactgcaggtgcc 262 Query: 94 cgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctg 153 ||| |||| | |||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 263 ggacaacgtgttcatcctggaccaggcggaggaggaagggatcgacctgccttactcctg 322 Query: 154 ccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggc 199 |||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 323 ccgcgcgggctcctgctcctcctgcgccggcaaggtggtctccggc 368
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 209 cagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgc 268 |||||||||||||||||||| ||||||||||||||||| || || | |||||||||||| Sbjct: 180421 cagtccgaccagagcttcctggacgacgaccagatcgaagccggtttcgtgctcacctgc 180480 Query: 269 gccgcgtaccccacctc 285 | || ||||||||||| Sbjct: 180481 gtggcttaccccacctc 180497 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 134 atcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 |||||||||||||||||||||||||| ||| | |||||| |||||||||| Sbjct: 180346 atcgacctgccctactcctgccgcgctggcgcttgctccacctgcgccgg 180395
>gb|AY826848.1| Heterocapsa triquetra clone HTF2 chloroplast ferredoxin mRNA, complete cds; nuclear gene for chloroplast product Length = 650 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 101 gtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgcc 160 |||||||| || ||||| ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 279 gtctacattctggaccaggccgaggaggagggtatcgagctgccttactcctgccgcgcg 338 Query: 161 ggctcctgctcctcctgcgccgggaaggt 189 |||||||||||| |||||| || ||||| Sbjct: 339 ggctcctgctccagctgcgcgggcaaggt 367
>gb|AY826847.1| Heterocapsa triquetra clone HTF1 chloroplast ferredoxin mRNA, complete cds; nuclear gene for chloroplast product Length = 622 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 101 gtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgcc 160 ||||||||| | ||||| || |||||||| || ||||| |||||||||||||||||||| Sbjct: 293 gtctacatcttggaccaagcagaggaggagggtatcgagctgccctactcctgccgcgcg 352 Query: 161 ggctcctgctcctcctgcgccgggaaggt 189 |||||||||||| |||||| || ||||| Sbjct: 353 ggctcctgctccagctgcgcgggcaaggt 381
>ref|XM_472400.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 459 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 |||||||||||||||| |||||||||||| | |||||| |||||||||| ||||| ||| Sbjct: 266 tcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcg 325 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggt 254 ||| | |||||||| |||||| ||||||||||||| |||| ||| || || | Sbjct: 326 agggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggct 385 Query: 255 gggtgctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagg 314 ||||||||||||| ||||||||| ||| | || ||||||| |||| |||||||||| Sbjct: 386 acgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggagg 445
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 |||||||||||||||| |||||||||||| | |||||| |||||||||| ||||| ||| Sbjct: 108475 tcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcg 108534 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggt 254 ||| | |||||||| |||||| ||||||||||||| |||| ||| || || | Sbjct: 108535 agggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggct 108594 Query: 255 gggtgctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagg 314 ||||||||||||| ||||||||| ||| | || ||||||| |||| |||||||||| Sbjct: 108595 acgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggagg 108654
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 |||||||||||||||| |||||||||||| | |||||| |||||||||| ||||| ||| Sbjct: 20377842 tcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcg 20377901 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggt 254 ||| | |||||||| |||||| ||||||||||||| |||| ||| || || | Sbjct: 20377902 agggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggct 20377961 Query: 255 gggtgctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagg 314 ||||||||||||| ||||||||| ||| | || ||||||| |||| |||||||||| Sbjct: 20377962 acgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggagg 20378021 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 35479350 tcctgccgtgccggctcctgctcc 35479327
>gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 764 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 103 ctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgccgg 162 ||||||||||||| | ||||||||||| || ||||||||||| ||||| |||||||| || Sbjct: 180 ctacatcctcgacaaggccgaggaggacggcatcgacctgccgtactcgtgccgcgcggg 239 Query: 163 ctcctgctcctcctgcgccgggaaggtg 190 | ||||||| ||||||| || |||||| Sbjct: 240 cgcctgctcgacctgcgcgggcaaggtg 267 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 260 ctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 |||||||| | | |||||||||| |||||| | ||||||||| ||||||||||||||| Sbjct: 338 ctcacctgtgtctcgtaccccacgtcggactgcaccatcgagacgcacaaggaggaggag 397 Query: 320 ctc 322 ||| Sbjct: 398 ctc 400 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ttcctcgacgacgaccagat 243 |||||||||||||||||||| Sbjct: 301 ttcctcgacgacgaccagat 320
>dbj|AK120232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H21, full insert sequence Length = 835 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 |||||||||||||||| |||||||||||| | |||||| |||||||||| ||||| ||| Sbjct: 461 tcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcg 520 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggt 254 ||| | |||||||| |||||| ||||||||||||| |||| ||| || || | Sbjct: 521 agggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggct 580 Query: 255 gggtgctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagg 314 ||||||||||||| ||||||||| ||| | || ||||||| |||| |||||||||| Sbjct: 581 acgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggagg 640
>dbj|AK062016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F06, full insert sequence Length = 752 Score = 79.8 bits (40), Expect = 7e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 |||||||||||||||| |||||||||||| | |||||| |||||||||| ||||| ||| Sbjct: 424 tcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcg 483 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggt 254 ||| | |||||||| |||||| ||||||||||||| |||| ||| || || | Sbjct: 484 agggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggct 543 Query: 255 gggtgctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagg 314 ||||||||||||| ||||||||| ||| | || ||||||| |||| |||||||||| Sbjct: 544 acgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggagg 603
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 209 cagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgc 268 |||||||||||||||||||| |||||||| |||||||| ||||| | ||||| |||||| Sbjct: 540478 cagtccgaccagagcttcctggacgacgatcagatcgaagcgggctttgtgctgacctgc 540537 Query: 269 gccgcgtaccccacctc 285 | || ||||||||||| Sbjct: 540538 gtggcttaccccacctc 540554 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 104 tacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgccggc 163 |||||||||||| || || ||| |||| ||||||||||| |||||||||||||| ||| Sbjct: 540373 tacatcctcgacgcagcagaagagcaaggcatcgacctgccttactcctgccgcgctggc 540432 Query: 164 tcctgctcctcctgcgc 180 | |||||| ||||||| Sbjct: 540433 gcttgctccacctgcgc 540449
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 5e-10 Identities = 187/237 (78%) Strand = Plus / Plus Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 |||||||| ||||| ||| |||| |||||||| ||||||||||| || | || ||| Sbjct: 37234963 ctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcctggagctg 37235022 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 || ||||| ||||| |||||||| |||||| | |||||||| ||| ||| ||||||| || Sbjct: 37235023 ccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctccggcgag 37235082 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||| ||| | ||||| | |||||| ||||||||| ||||| |||||| Sbjct: 37235083 gtcgaccagtcggacgggtcgttcctggccgacgagcagatcgagcaggggtacgtgctc 37235142 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 || ||| | ||||||||| |||||| ||||||| | || |||||||| |||||| Sbjct: 37235143 acgtgcatctcgtaccccaagtcggactgcgtcatctacacccacaaggaagaggag 37235199
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 73.8 bits (37), Expect = 5e-10 Identities = 187/237 (78%) Strand = Plus / Plus Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 |||||||| ||||| ||| |||| |||||||| ||||||||||| || | || ||| Sbjct: 109619 ctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcctggagctg 109678 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 || ||||| ||||| |||||||| |||||| | |||||||| ||| ||| ||||||| || Sbjct: 109679 ccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctccggcgag 109738 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||| ||| | ||||| | |||||| ||||||||| ||||| |||||| Sbjct: 109739 gtcgaccagtcggacgggtcgttcctggccgacgagcagatcgagcaggggtacgtgctc 109798 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 || ||| | ||||||||| |||||| ||||||| | || |||||||| |||||| Sbjct: 109799 acgtgcatctcgtaccccaagtcggactgcgtcatctacacccacaaggaagaggag 109855
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 73.8 bits (37), Expect = 5e-10 Identities = 187/237 (78%) Strand = Plus / Plus Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 |||||||| ||||| ||| |||| |||||||| ||||||||||| || | || ||| Sbjct: 71952 ctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcctggagctg 72011 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 || ||||| ||||| |||||||| |||||| | |||||||| ||| ||| ||||||| || Sbjct: 72012 ccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctccggcgag 72071 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||| ||| | ||||| | |||||| ||||||||| ||||| |||||| Sbjct: 72072 gtcgaccagtcggacgggtcgttcctggccgacgagcagatcgagcaggggtacgtgctc 72131 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 || ||| | ||||||||| |||||| ||||||| | || |||||||| |||||| Sbjct: 72132 acgtgcatctcgtaccccaagtcggactgcgtcatctacacccacaaggaagaggag 72188
>dbj|AK119310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G06, full insert sequence Length = 3419 Score = 73.8 bits (37), Expect = 5e-10 Identities = 187/237 (78%) Strand = Plus / Minus Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 |||||||| ||||| ||| |||| |||||||| ||||||||||| || | || ||| Sbjct: 632 ctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcctggagctg 573 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 || ||||| ||||| |||||||| |||||| | |||||||| ||| ||| ||||||| || Sbjct: 572 ccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctccggcgag 513 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||| ||| | ||||| | |||||| ||||||||| ||||| |||||| Sbjct: 512 gtcgaccagtcggacgggtcgttcctggccgacgagcagatcgagcaggggtacgtgctc 453 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 || ||| | ||||||||| |||||| ||||||| | || |||||||| |||||| Sbjct: 452 acgtgcatctcgtaccccaagtcggactgcgtcatctacacccacaaggaagaggag 396
>dbj|AK069860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H08, full insert sequence Length = 911 Score = 73.8 bits (37), Expect = 5e-10 Identities = 187/237 (78%) Strand = Plus / Plus Query: 83 ctcgaggtccccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctg 142 |||||||| ||||| ||| |||| |||||||| ||||||||||| || | || ||| Sbjct: 549 ctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcctggagctg 608 Query: 143 ccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtctccggccag 202 || ||||| ||||| |||||||| |||||| | |||||||| ||| ||| ||||||| || Sbjct: 609 ccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctccggcgag 668 Query: 203 ctggaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctc 262 | |||||||| ||| | ||||| | |||||| ||||||||| ||||| |||||| Sbjct: 669 gtcgaccagtcggacgggtcgttcctggccgacgagcagatcgagcaggggtacgtgctc 728 Query: 263 acctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggaggaggag 319 || ||| | ||||||||| |||||| ||||||| | || |||||||| |||||| Sbjct: 729 acgtgcatctcgtaccccaagtcggactgcgtcatctacacccacaaggaagaggag 785
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 209 cagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgc 268 ||||| |||||||||||||| ||||||||||||||||| || || | ||||| |||||| Sbjct: 1967120 cagtctgaccagagcttcctggacgacgaccagatcgaagccggcttcgtgctgacctgc 1967061 Query: 269 gccgcgtaccccacc 283 | ||| ||||||||| Sbjct: 1967060 gtcgcctaccccacc 1967046 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 134 atcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 |||||||| ||||||||||||||||| || | |||||| |||||||||| Sbjct: 1967195 atcgacctcccctactcctgccgcgctggagcttgctccacctgcgccgg 1967146 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 cagagcttcctcgacgacgaccagatcg 245 ||||||||||| |||||||| ||||||| Sbjct: 1709409 cagagcttccttgacgacgaacagatcg 1709436
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 129 aagggatcgacctgccctactcctgccgcgccggctcctgctc 171 |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1432050 aagggatcgacctgccctactcctgccgcgccggagcctgctc 1432008
>gb|AY826851.1| Pavlova lutheri clone PLF2 chloroplast ferredixon mRNA, partial cds; nuclear gene for chloroplast product Length = 736 Score = 69.9 bits (35), Expect = 7e-09 Identities = 170/215 (79%) Strand = Plus / Plus Query: 104 tacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgccggc 163 |||||||||||| | || |||||||| || || ||||| || ||||| |||||||||||| Sbjct: 192 tacatcctcgacaaggcggaggaggagggcattgacctcccgtactcgtgccgcgccggc 251 Query: 164 tcctgctcctcctgcgccgggaaggtggtctccggccagctggaccagtccgaccagagc 223 | |||||| ||||| ||| ||||| | |||||| | ||||||||||||||| Sbjct: 252 gcgtgctccacctgctgcggcaaggtcgcgtccggcaccgtcgaccagtccgaccagtcg 311 Query: 224 ttcctcgacgacgaccagatcgaggcggggtgggtgctcacctgcgccgcgtaccccacc 283 ||||||||||||| |||||| ||| |||| | || || || |||| |||||||| | | Sbjct: 312 ttcctcgacgacggccagatggagtcgggcttcgtcctgacgtgcgtggcgtacccgagc 371 Query: 284 tcggacctcgtcatcgagacacacaaggaggagga 318 |||||| | |||||||| |||||||||||||| Sbjct: 372 tcggactgcacgatcgagacgcacaaggaggagga 406
>gb|AY107646.1| Zea mays PCO072676 mRNA sequence Length = 941 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccggga 185 ||||||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 436 ctgcccttctcctgccgcgccgggtcctgctccacctgcgccggga 481
>dbj|AB001386.1| Maize DNA for Fd VI, complete cds Length = 2351 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccggga 185 ||||||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 1860 ctgcccttctcctgccgcgccgggtcctgctccacctgcgccggga 1905
>dbj|AB001385.1| Maize mRNA for Fd VI, complete cds Length = 845 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccggga 185 ||||||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 434 ctgcccttctcctgccgcgccgggtcctgctccacctgcgccggga 479
>gb|AY111751.1| Zea mays CL56157_1 mRNA sequence Length = 424 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 ||||||||||||||||||||||||||||| | |||||| | |||||||| Sbjct: 347 tcgacctgccctactcctgccgcgccggcgcgtgctccacgtgcgccgg 299 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 259 gctcacctgcgccgcgtaccccacctcggacctcgtcatcgagacacacaaggagga 315 ||||||||||| ||||||||| || || ||| ||||||| |||| |||| |||||| Sbjct: 223 gctcacctgcgtcgcgtacccgacgtccgactgcgtcatccagacgcacagggagga 167
>gb|AY616100.1| Prototheca wickerhamii plastid ferroredoxin-like mRNA, partial sequence Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggtct 194 ||||||| ||||||||||||||| | || |||||||| |||||| |||||||| || | Sbjct: 297 tcgacctaccctactcctgccgctctgggacctgctccacctgcgttgggaaggttgtgt 356 Query: 195 ccggccagctggaccagtccgaccagagcttcctcgacgacgaccagat 243 | || ||||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 357 ctggtgagctggatcagagcgatcagagcttcctagacgacgcccagat 405
>gb|AY826850.1| Isochrysis galbana clone ISF2 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 582 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 104 tacatcctcgaccacgccgaggaggaagggatcgacctgccctactcctgccgcgccggc 163 |||||||||||| | || ||||||||||| || |||||||| ||||| || || |||||| Sbjct: 177 tacatcctcgacaaggctgaggaggaaggaattgacctgccatactcgtgtcgtgccggc 236 Query: 164 tcctgctcctcctgcgccgggaaggt 189 ||||||| ||||||| || ||||| Sbjct: 237 gcctgctcgacctgcgcgggcaaggt 262 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 296 atcgagacacacaaggaggagga 318 ||||||||||||||||||||||| Sbjct: 369 atcgagacacacaaggaggagga 391
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 206 gaccagtccgaccagagcttcctcgacgacgaccagatcg 245 |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 288642 gaccagaccgaccagagcttcctggacgacgatcagatcg 288603 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggt 189 ||||||||||||||||| || || |||||||| |||| ||||| ||||| Sbjct: 288708 ctgccctactcctgccgagctggagcctgctccacctgtgccggcaaggt 288659
>gb|AF003125.1|AF003125 Mesembryanthemum crystallinum ferredoxin I precursor mRNA, complete cds Length = 656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 92 cccgacgacgtctacatcctcgaccacgccgaggaggaagggatcgacctgccctactcc 151 ||||| || ||||||||||||||| ||||||||||| || || || ||||| ||||| Sbjct: 270 cccgatgatgtctacatcctcgacgccgccgaggaggccggcattgatctgccatactcg 329 Query: 152 tgccgcgccggctcctgctcctcctgcgccgggaaggtg 190 || || ||||| || || || || ||||||||||||||| Sbjct: 330 tgtcgtgccgggtcgtgttcgtcttgcgccgggaaggtg 368
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 129 aagggatcgacctgccctactcctgccgcgccgg 162 |||||||||| |||||||| |||||||||||||| Sbjct: 1672993 aagggatcgagctgccctattcctgccgcgccgg 1673026
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 157 cgccggctcctgctcctcctgcgcc 181 ||||||||||||||||||||||||| Sbjct: 1902559 cgccggctcctgctcctcctgcgcc 1902583
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 137 gacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtggt 192 |||||||||| |||||||||||| ||| ||||||| |||| ||||| ||| |||| Sbjct: 3822134 gacctgcccttctcctgccgcgcgggcgcctgctcgacctgtgccggcaagatggt 3822189
>gb|AY189833.1| Helianthus annuus ferredoxin (FER1) mRNA, complete cds Length = 571 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 206 gaccagtccgaccagagcttcctcgacgacgaccagatcgaggcggggtgggtgctcac 264 |||||||| |||||||| || || || || |||||||| || || |||||||||||||| Sbjct: 320 gaccagtctgaccagagttttcttgatgatgaccagattgaagctgggtgggtgctcac 378 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 atcgagacacacaaggaggaggag 319 |||||||| ||||||||||||||| Sbjct: 410 atcgagacccacaaggaggaggag 433
>emb|Y12734.1|PPFERREDO P.patens mRNA for ferredoxin Length = 888 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 137 gacctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 |||||||| ||||||||||| ||||| | |||||||| |||||||| Sbjct: 398 gacctgccttactcctgccgtgccggagcttgctcctcttgcgccgg 444
>gb|DQ122892.1| Chlamydomonas incerta chloroplast ferredoxin (PetF) mRNA, complete cds; nuclear gene for chloroplast product Length = 619 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 137 gacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggtgg 191 |||||||||||||| |||||||| || | |||||| ||||||||| ||||||| Sbjct: 220 gacctgccctactcttgccgcgctggtgcttgctccagctgcgccggcaaggtgg 274
>gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and PtxS (ptxS) genes, complete cds and ketogluconate utilization operon gene, complete sequence Length = 7447 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cctcgaccacgccgaggaggaag 131 ||||||||||||||||||||||| Sbjct: 5378 cctcgaccacgccgaggaggaag 5356
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 221 agcttcctcgacgacgaccagatcgag 247 |||||||||||||||||| |||||||| Sbjct: 25527888 agcttcctcgacgacgacgagatcgag 25527914 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 ||||||||||| ||||||||||| |||||| |||||||||| Sbjct: 8467226 ctgccctactcgtgccgcgccggggattgctccacctgcgccgg 8467183
>gb|AE004652.1| Pseudomonas aeruginosa PAO1, section 213 of 529 of the complete genome Length = 11558 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cctcgaccacgccgaggaggaag 131 ||||||||||||||||||||||| Sbjct: 2203 cctcgaccacgccgaggaggaag 2181
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 221 agcttcctcgacgacgaccagatcgag 247 |||||||||||||||||| |||||||| Sbjct: 65158 agcttcctcgacgacgacgagatcgag 65184
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 204 tggaccagtccgaccagagcttcctcgacgacga 237 |||||||||| || |||||||||||||| ||||| Sbjct: 122753 tggaccagtctgatcagagcttcctcgatgacga 122720
>ref|NM_015576.1| Homo sapiens CAZ-associated structural protein (CAST1), mRNA Length = 6138 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gcgccggctcctgctcctcctg 177 |||||||||||||||||||||| Sbjct: 23 gcgccggctcctgctcctcctg 44
>gb|AE011784.1| Xanthomonas axonopodis pv. citri str. 306, section 162 of 469 of the complete genome Length = 13803 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gctccgcgcgcaggcgacgtac 46 |||||||||||||||||||||| Sbjct: 385 gctccgcgcgcaggcgacgtac 364
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 acacaaggaggaggagctcacc 325 |||||||||||||||||||||| Sbjct: 4036911 acacaaggaggaggagctcacc 4036890
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 acacaaggaggaggagctcacc 325 |||||||||||||||||||||| Sbjct: 80566 acacaaggaggaggagctcacc 80545
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 acacaaggaggaggagctcacc 325 |||||||||||||||||||||| Sbjct: 142787 acacaaggaggaggagctcacc 142766
>dbj|AK100878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C21, full insert sequence Length = 3241 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 acacaaggaggaggagctcacc 325 |||||||||||||||||||||| Sbjct: 2800 acacaaggaggaggagctcacc 2821
>gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, complete sequence Length = 217346 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 gcgccggctcctgctcctcctg 177 |||||||||||||||||||||| Sbjct: 72263 gcgccggctcctgctcctcctg 72242
>dbj|AB002376.2| Human mRNA for KIAA0378 gene, partial cds Length = 6137 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gcgccggctcctgctcctcctg 177 |||||||||||||||||||||| Sbjct: 23 gcgccggctcctgctcctcctg 44
>gb|AC011309.5| Homo sapiens BAC clone CTD-2503O24 from 7, complete sequence Length = 112863 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 atattgaggagttacagagtaatta 430 |||||||||| |||||||||||||| Sbjct: 40114 atattgaggaattacagagtaatta 40138
>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence Length = 214272 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 atattgaggagttacagagtaatta 430 |||||||||| |||||||||||||| Sbjct: 153615 atattgaggaattacagagtaatta 153639
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 tctacatcctcgaccacgccgagga 126 |||||||||||||||| |||||||| Sbjct: 62239 tctacatcctcgaccatgccgagga 62263
>emb|Z46944.1|CSNPHFDXN C.sinensis mRNA for non-photosynthetic ferredoxin Length = 690 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 tcgacctgccctactcctgccgcgc 159 ||||||||||||| ||||||||||| Sbjct: 339 tcgacctgccctattcctgccgcgc 363
>gb|AC010032.10| Drosophila melanogaster 3L BAC RP98-2N23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 192399 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 157395 cgccggctcctgctcctcctg 157415
>gb|AC091127.3| Drosophila melanogaster 3L BAC RP98-27E18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177835 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 74904 cgccggctcctgctcctcctg 74924
>ref|NM_206228.1| Drosophila melanogaster trio CG18214-RF, transcript variant F (trio), mRNA Length = 2961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 783 cgccggctcctgctcctcctg 763
>ref|NM_167849.1| Drosophila melanogaster trio CG18214-RB, transcript variant B (trio), mRNA Length = 4175 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 767 cgccggctcctgctcctcctg 747
>ref|NM_167848.1| Drosophila melanogaster trio CG18214-RD, transcript variant D (trio), mRNA Length = 4908 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 1500 cgccggctcctgctcctcctg 1480
>ref|NM_167847.1| Drosophila melanogaster trio CG18214-RC, transcript variant C (trio), mRNA Length = 9514 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 6106 cgccggctcctgctcctcctg 6086
>ref|NM_143703.2| Drosophila melanogaster trio CG18214-RA, transcript variant A (trio), mRNA Length = 9249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 5841 cgccggctcctgctcctcctg 5821
>gb|AY070715.1| Drosophila melanogaster SD08659 full length cDNA Length = 2990 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 771 cgccggctcctgctcctcctg 751
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 gcttcctcgacgacgaccagatcga 246 |||||||||||||||||| |||||| Sbjct: 3943785 gcttcctcgacgacgaccggatcga 3943761 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gggtgctcacctgcgccgcg 274 |||||||||||||||||||| Sbjct: 251342 gggtgctcacctgcgccgcg 251361
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 tcctgccgcgccggctcctgctcct 173 |||||||||||||||||| |||||| Sbjct: 1126892 tcctgccgcgccggctccggctcct 1126916
>gb|AF216663.1|AF216663 Drosophila melanogaster guanine-nucleotide-exchange-factor TRIO (Trio) mRNA, complete cds Length = 8033 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 5838 cgccggctcctgctcctcctg 5818
>gb|AF215635.1|AF215635 Drosophila melanogaster Rho family guanine nucleotide exchange factor Trio (Trio) mRNA, complete cds Length = 7967 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 5849 cgccggctcctgctcctcctg 5829
>dbj|AK119950.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C04, full insert sequence Length = 2055 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 tccccgacgacgtctacatcc 110 ||||||||||||||||||||| Sbjct: 370 tccccgacgacgtctacatcc 390
>ref|NM_211926.1| Eremothecium gossypii AGR198Cp (AGR198C), mRNA Length = 1548 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcct 173 |||||||||||||||||| |||||| Sbjct: 554 tcctgccgcgccggctccggctcct 530
>gb|AE003470.4| Drosophila melanogaster chromosome 3L, section 4 of 83 of the complete sequence Length = 318699 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 89551 cgccggctcctgctcctcctg 89571
>gb|BT001377.1| Drosophila melanogaster GH01987 full insert cDNA Length = 3071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 75 cgccggctcctgctcctcctg 55
>gb|U29516.1|CRU29516 Chlamydomonas reinhardtii ferredoxin precursor gene, complete cds Length = 989 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 137 gacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggt 189 |||||||||||||| |||||||| || | |||||| ||||||||| ||||| Sbjct: 605 gacctgccctactcttgccgcgctggtgcttgctccagctgcgccggcaaggt 657
>gb|L10349.1|CREFERREDO Chlamydomonas reinhardtii ferredoxin mRNA, complete cds Length = 527 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 137 gacctgccctactcctgccgcgccggctcctgctcctcctgcgccgggaaggt 189 |||||||||||||| |||||||| || | |||||| ||||||||| ||||| Sbjct: 201 gacctgccctactcttgccgcgctggtgcttgctccagctgcgccggcaaggt 253
>dbj|AB035419.1| Drosophila melanogaster mRNA for Trio, complete cds Length = 9238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgccggctcctgctcctcctg 177 ||||||||||||||||||||| Sbjct: 5838 cgccggctcctgctcctcctg 5818
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 agacacacaaggaggaggag 319 |||||||||||||||||||| Sbjct: 102241 agacacacaaggaggaggag 102260
>ref|XM_474484.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 419 tcctgccgtgccggctcctgctcc 396
>ref|XM_423873.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9030409G11 (LOC426211), mRNA Length = 1055 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgcgccggctcctgctcctcctgcgcc 181 ||||||| |||||||||||| ||||||| Sbjct: 290 ccgcgccagctcctgctccttctgcgcc 263
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 299 gagacacacaaggaggaggagctcaccgcttgaatt 334 ||||| ||||||||||||||||| || |||| |||| Sbjct: 427 gagactcacaaggaggaggagcttactgcttaaatt 462
>ref|XM_862579.1| PREDICTED: Canis familiaris hypothetical protein LOC610929 (LOC610929), mRNA Length = 996 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gctcctgctcctcctgcgcc 181 |||||||||||||||||||| Sbjct: 649 gctcctgctcctcctgcgcc 630
>gb|AC124479.4| Mus musculus BAC clone RP24-113I12 from chromosome 15, complete sequence Length = 161246 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tgaattcactgattttgtgt 348 |||||||||||||||||||| Sbjct: 144351 tgaattcactgattttgtgt 144370
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ggtgctcacctgcgccgcgt 275 |||||||||||||||||||| Sbjct: 1843325 ggtgctcacctgcgccgcgt 1843306
>ref|XM_538365.2| PREDICTED: Canis familiaris similar to mannoside acetylglucosaminyltransferase 3 (LOC481244), mRNA Length = 1645 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 cccgacgacgtctacatcctcgaccacgccga 123 ||||||||||||| |||| ||||| ||||||| Sbjct: 943 cccgacgacgtcttcatcatcgacgacgccga 974
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcctcgaccacgccgagga 126 |||||||||||||||||||| Sbjct: 74592 atcctcgaccacgccgagga 74573
>gb|AC125526.4| Mus musculus BAC clone RP24-498L21 from chromosome 15, complete sequence Length = 178670 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tgaattcactgattttgtgt 348 |||||||||||||||||||| Sbjct: 5172 tgaattcactgattttgtgt 5191
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcgacgacgaccagatcgag 247 |||||||||||||||||||| Sbjct: 3096107 tcgacgacgaccagatcgag 3096088
>emb|Z75520.1|LESEND33 L.esculentum mRNA for ferredoxin-I Length = 574 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 299 gagacacacaaggaggaggagctcaccgcttgaatt 334 ||||| ||||||||||||||||| || |||| |||| Sbjct: 426 gagactcacaaggaggaggagcttactgcttaaatt 461
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 104153 tcctgccgtgccggctcctgctcc 104130
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcgacgacgaccagatcgag 247 |||||||||||||||||||| Sbjct: 3117418 tcgacgacgaccagatcgag 3117399
>gb|DQ360407.1| Chlamydomonas reinhardtii clone 1112084B10 putative ferredoxin (PetF2) mRNA, complete cds Length = 976 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 cgccgaggaggaagggatcgacctgccctactcctgccgc 157 ||||||||||| || || |||||||||||||| |||||| Sbjct: 242 cgccgaggaggcgggcatggacctgccctactcgtgccgc 281
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 acgaccagatcgaggcgggg 253 |||||||||||||||||||| Sbjct: 1552149 acgaccagatcgaggcgggg 1552130
>gb|AF479109.1| Begonia metallica x Begonia sanguinea 26S ribosomal RNA gene, complete sequence Length = 3168 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgaggtccccgacgacgtct 104 |||||||||||||||||||| Sbjct: 1670 cgaggtccccgacgacgtct 1651
>ref|NM_204131.1| Gallus gallus LIM domain kinase 1 (LIMK1), mRNA Length = 2796 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gaggaggaagggatcgacctgccc 145 ||||||||||||| |||||||||| Sbjct: 86 gaggaggaagggaccgacctgccc 109
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence Length = 201971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gccggctcctgctcctcctg 177 |||||||||||||||||||| Sbjct: 96667 gccggctcctgctcctcctg 96686
>gb|AF260753.1|AF260753 Cricetulus griseus plectin mRNA, partial cds Length = 14618 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 ctgccgcgccggctcctgctcctcctgc 178 ||||||||||| |||||||||| ||||| Sbjct: 5694 ctgccgcgccgcctcctgctccgcctgc 5667
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 tgattttgtgtatttccatc 357 |||||||||||||||||||| Sbjct: 23422 tgattttgtgtatttccatc 23403
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 140 ctgccctactcctgccgcgccggctcctgctcctcctgcgccgg 183 ||||||||||| ||||||||||| |||||| |||||||||| Sbjct: 98819 ctgccctactcgtgccgcgccggggattgctccacctgcgccgg 98776
>dbj|AK105982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G02, full insert sequence Length = 1113 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 301 tcctgccgtgccggctcctgctcc 278
>dbj|AK105888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E04, full insert sequence Length = 1058 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 236 tcctgccgtgccggctcctgctcc 213
>dbj|AK070001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034E19, full insert sequence Length = 950 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tcctgccgcgccggctcctgctcc 172 |||||||| ||||||||||||||| Sbjct: 237 tcctgccgtgccggctcctgctcc 214
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tcacgccggagggcgaggtggacc 83 |||||||||||||||| ||||||| Sbjct: 3515851 tcacgccggagggcgacgtggacc 3515874
>dbj|AB073752.1| Gallus gallus limk1 mRNA for LIM kinase 1, complete cds Length = 2796 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gaggaggaagggatcgacctgccc 145 ||||||||||||| |||||||||| Sbjct: 86 gaggaggaagggaccgacctgccc 109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,105,984 Number of Sequences: 3902068 Number of extensions: 4105984 Number of successful extensions: 89241 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 87820 Number of HSP's gapped (non-prelim): 1401 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
