>ref|XM_470091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1344

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Plus

                                                                        
Query: 171  tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
            ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 1112 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 1169

                                         
Query: 229  tgctatgatggtaggttatctccatgaca 257
            |||||||   |||||||||||||||||||
Sbjct: 1170 tgctatg---gtaggttatctccatgaca 1195

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Plus

                                                                            
Query: 171      tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
                ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 33886626 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 33886683

                                             
Query: 229      tgctatgatggtaggttatctccatgaca 257
                |||||||   |||||||||||||||||||
Sbjct: 33886684 tgctatg---gtaggttatctccatgaca 33886709

>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete
             sequence
          Length = 27024

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Plus

                                                                         
Query: 171   tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
             ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 20828 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 20885

                                          
Query: 229   tgctatgatggtaggttatctccatgaca 257
             |||||||   |||||||||||||||||||
Sbjct: 20886 tgctatg---gtaggttatctccatgaca 20911

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Plus

                                                                            
Query: 171      tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
                ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 33977098 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 33977155

                                             
Query: 229      tgctatgatggtaggttatctccatgaca 257
                |||||||   |||||||||||||||||||
Sbjct: 33977156 tgctatg---gtaggttatctccatgaca 33977181

>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
              sequence
          Length = 172337

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Minus

                                                                          
Query: 171    tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
              ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 171065 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 171008

                                           
Query: 229    tgctatgatggtaggttatctccatgaca 257
              |||||||   |||||||||||||||||||
Sbjct: 171007 tgctatg---gtaggttatctccatgaca 170982

>dbj|AK065405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007I03, full
            insert sequence
          Length = 1521

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 80/89 (89%), Gaps = 7/89 (7%)
 Strand = Plus / Plus

                                                                        
Query: 171  tgtaaggtct--agaacattcgctttatttgttaattgactgttaaccctagtaatgtgg 228
            ||||||||||  |||||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 1294 tgtaaggtctcaagaacatttgttttatttgtta-ttgactgttaaccctagta-tgtgg 1351

                                         
Query: 229  tgctatgatggtaggttatctccatgaca 257
            |||||||   |||||||||||||||||||
Sbjct: 1352 tgctatg---gtaggttatctccatgaca 1377

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 372      aataataaaaagggtataagga 393
                ||||||||||||||||||||||
Sbjct: 28110306 aataataaaaagggtataagga 28110327

>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 372   aataataaaaagggtataagga 393
             ||||||||||||||||||||||
Sbjct: 41212 aataataaaaagggtataagga 41233

>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 293    tgttttccttttcacccccttttag 317
              |||||||||||| ||||||||||||
Sbjct: 190107 tgttttcctttttacccccttttag 190083

>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence
          Length = 161765

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 285    agctttcatgttttccttttcaccc 309
              |||||| ||||||||||||||||||
Sbjct: 130969 agcttttatgttttccttttcaccc 130993

>gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, complete sequence
          Length = 149710

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 194  tatttgttaattgactgttaa 214
            |||||||||||||||||||||
Sbjct: 1997 tatttgttaattgactgttaa 2017

>gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, complete sequence
          Length = 173066

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   tatttgttaattgactgttaa 214
             |||||||||||||||||||||
Sbjct: 11915 tatttgttaattgactgttaa 11935

>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12,
             complete sequence
          Length = 161610

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ataataataaaaagggtataa 390
             |||||||||||||||||||||
Sbjct: 87129 ataataataaaaagggtataa 87149

>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence
          Length = 189789

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    gctttcatgttttccttttc 305
              ||||||||||||||||||||
Sbjct: 163603 gctttcatgttttccttttc 163584

>emb|AL360182.15| Human DNA sequence from clone RP11-549L6 on chromosome 10 Contains the
             MXI1 gene for MAX interacting protein 1 (MAD2,MXD2), a
             ribosomal protein L21 (RPL21) pseudogene, a novel gene,
             the SPF30 gene for splicing factor 30, survival of motor
             neuron-related (SMNR) and three CpG islands, complete
             sequence
          Length = 145256

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   gctttcatgttttccttttc 305
             ||||||||||||||||||||
Sbjct: 20962 gctttcatgttttccttttc 20943

>emb|BX927175.11| Zebrafish DNA sequence from clone CH211-237C7 in linkage group 18,
            complete sequence
          Length = 97314

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 363  gtcgcggataataataaaaagggt 386
            ||||||||||| ||||||||||||
Sbjct: 5420 gtcgcggataaaaataaaaagggt 5443

>gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, complete sequence
          Length = 223735

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     caaggagaaacctctgggacaatg 105
              ||||||||| ||||||||||||||
Sbjct: 197158 caaggagaaccctctgggacaatg 197181

>gb|AF231842.1|AF231842 Jasminum odoratissimum tRNA-Leu (trnL) gene, partial intron and 3'
           exon, and trnL-trnF spacer region; chloroplast gene for
           chloroplast product
          Length = 887

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 ataataataaaaagggtata 389
           ||||||||||||||||||||
Sbjct: 570 ataataataaaaagggtata 551

>gb|AF231838.1|AF231838 Jasminum humile tRNA-Leu (trnL) gene, partial intron and 3' exon,
           and trnL-trnF spacer region; chloroplast gene for
           chloroplast product
          Length = 887

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 ataataataaaaagggtata 389
           ||||||||||||||||||||
Sbjct: 570 ataataataaaaagggtata 551

>gb|AC092116.3| Homo sapiens chromosome 16 clone CTD-2133M23, complete sequence
          Length = 61373

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  tatttgttaattgactgtta 213
            ||||||||||||||||||||
Sbjct: 4594 tatttgttaattgactgtta 4613

>gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tatttgttaattgactgtta 213
              ||||||||||||||||||||
Sbjct: 168120 tatttgttaattgactgtta 168139

>gb|AC160568.2| Pan troglodytes BAC clone CH251-293A11 from chromosome unknown, complete
              sequence
          Length = 159393

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tatttgttaattgactgtta 213
              ||||||||||||||||||||
Sbjct: 113069 tatttgttaattgactgtta 113088

>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   ggaacctccttgtatattat 342
             ||||||||||||||||||||
Sbjct: 29605 ggaacctccttgtatattat 29624

>emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene
          Length = 200033

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    caaggagaaacctctgggacaatg 105
             ||||||||| ||||||||||||||
Sbjct: 35407 caaggagaaccctctgggacaatg 35430

>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence
          Length = 223470

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    gctttcatgttttccttttc 305
              ||||||||||||||||||||
Sbjct: 100826 gctttcatgttttccttttc 100807

>gb|AY836536.1| Jasminum fruticans tRNA-Leu (trnL) and trnL-trnF intergenic spacer,
           partial sequence; chloroplast
          Length = 949

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 ataataataaaaagggtata 389
           ||||||||||||||||||||
Sbjct: 637 ataataataaaaagggtata 618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,672,106
Number of Sequences: 3902068
Number of extensions: 3672106
Number of successful extensions: 62456
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62349
Number of HSP's gapped (non-prelim): 95
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)